Citrus Sinensis ID: 035945

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Secondary Structure (PSIPRED)
ccccccccccEEccccccccHHHHHHHHHHHHccccccEEEEEEEEEEEEEEEccEEEEEEccEEEccccccEEEEEEEccccccEEEEEEEEccccHHHHHHHHHcccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEEccccccccHHHHHHHHHHHcccccccEEEEEEEEEEEEEccccEEEEEEccEEcccccEEEEEEEEEEccccccEEEEEccccccHEEEEHHHHcccccEEEEEEcc
Coil and Loop (DISEMBL)
mkcqnyslgiiahpsgteqSMHQCLDLMENlygdkqgkqyRVWVDRVSSAQIGLDAWLVKfdkwessecsplhITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Flexible Loop (DISEMBL)
MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELrkifptgsvmmwqlsl
Low Complexity Region (SEG)
MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Disordered region (IsUnstruct)
*******LGIIA********MHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQ***
Disordered Region (DISOPRED)
******SLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Disordered Region (DISEMBL)
MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Disordered Region (DISPRO)
*KCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKWRKQFNLGKFIIELRKIFPTGSVMMWQLSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q5IH13	425	Sucrose-phosphatase 2 OS=	N/A	no	0.613	0.171	0.513	8e-15
Q93WU4	425	Probable sucrose-phosphat	yes	no	0.571	0.16	0.5	1e-13
A3AZW5	409	Probable sucrose-phosphat	yes	no	0.546	0.158	0.492	1e-13
Q9FQ11	423	Sucrose-phosphatase 1 OS=	N/A	no	0.705	0.198	0.397	1e-13
Q94E75	423	Probable sucrose-phosphat	yes	no	0.521	0.146	0.5	3e-13
Q5IH14	425	Sucrose-phosphatase 1 OS=	N/A	no	0.613	0.171	0.472	3e-13
Q6YXW6	423	Sucrose-phosphatase 2 OS=	no	no	0.504	0.141	0.5	3e-13
Q9SJ66	422	Probable sucrose-phosphat	no	no	0.546	0.154	0.430	7e-12
Q84ZX8	437	Sucrose-phosphatase 2 OS=	N/A	no	0.529	0.144	0.454	2e-11
Q93XN8	423	Probable sucrose-phosphat	no	no	0.504	0.141	0.45	1e-09

>sp|Q5IH13|SPP2_TOBAC Sucrose-phosphatase 2 OS=Nicotiana tabacum GN=SPP2 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)

Query: 9   GIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWE-SS 67
           G   HPSG E+S+ +C+ L    +GDKQGKQ+R+WVD+V   Q+G D+WLV F KWE S 
Sbjct: 320 GTFVHPSGVEKSLQECVTLFGTCHGDKQGKQFRIWVDQVLPVQVGSDSWLVSFKKWELSG 379

Query: 68  ECSPLHITLVLASA 81
           E     IT VL S+
Sbjct: 380 EDRRCCITTVLLSS 393

Catalyzes the final step of sucrose synthesis.
Nicotiana tabacum (taxid: 4097)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2EC: 4

>sp|Q93WU4|SPP3A_ARATH Probable sucrose-phosphatase 3a OS=Arabidopsis thaliana GN=SPP3A PE=2 SV=2

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 47/68 (69%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K  +  LGI  HPSG E+ +H+ +D MENLYGD + K++R+W+D V+S+ I  D WL K
Sbjct: 314 LKSLSSPLGIFVHPSGVEKPIHEWIDEMENLYGDGKEKKFRIWLDNVTSSHISSDTWLAK 373

Query: 61  FDKWESSE 68
           F K E SE
Sbjct: 374 FVKHELSE 381

Catalyzes the final step of sucrose synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|A3AZW5|SPP3_ORYSJ Probable sucrose-phosphatase 3 OS=Oryza sativa subsp. japonica GN=SPP3 PE=3 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   +  G   HPSG E S+H  +D + + Y DKQGK++RVWVDR+ ++ IG   WLV+
Sbjct: 297 LKRITHPNGTTIHPSGRECSLHASIDALSSCYADKQGKKFRVWVDRIVASSIGTINWLVR 356

Query: 61  FDKWE 65
           FDKWE
Sbjct: 357 FDKWE 361

Catalyzes the final step of sucrose synthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 5   NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKW 64
            ++ G+  HP+G E S+H  +D + + YGDKQG++YR WVDR+   Q G D+W+ +FD W
Sbjct: 315 THANGVTIHPAGLELSLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 374

Query: 65  ESSE----CSPLHITLVLASAFWDLFVI 88
           ES      CS   + L+L +   + FV+
Sbjct: 375 ESEGDVRVCSLSSLALILKAESPEGFVL 402

Catalyzes the final step of sucrose synthesis. Inactive with fructose 6-phosphate as substrate.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q94E75|SPP1_ORYSJ Probable sucrose-phosphatase 1 OS=Oryza sativa subsp. japonica GN=SPP1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 45/62 (72%)

Query: 5   NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKW 64
            ++ G+I  PSG E S+H  +D + + YG+KQGK+YR WVDR+  +Q G D+WLV+FD W
Sbjct: 315 THANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRLFVSQSGSDSWLVRFDLW 374

Query: 65  ES 66
           E+
Sbjct: 375 EA 376

Catalyzes the final step of sucrose synthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1 OS=Nicotiana tabacum GN=SPP1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 9   GIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWE-SS 67
           G   HPSG E+ +  C++ +   +GDKQGKQ+R+WVD V   Q+G D+WLV F KWE   
Sbjct: 320 GTFVHPSGVEKYLEDCINTLRTCHGDKQGKQFRIWVDLVLPTQVGSDSWLVSFKKWELCG 379

Query: 68  ECSPLHITLVLASA 81
           E     IT VL S+
Sbjct: 380 EERQCCITTVLLSS 393

Catalyzes the final step of sucrose synthesis.

Nicotiana tabacum (taxid: 4097)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q6YXW6|SPP2_ORYSJ Sucrose-phosphatase 2 OS=Oryza sativa subsp. japonica GN=SPP2 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 44/60 (73%)

Query: 6   YSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWE 65
           ++ G+I HP+G E S+H  +D + + YGDKQGK+YR WVDR+  +Q G + WLV+F+ WE
Sbjct: 316 HANGVIIHPAGLECSLHASIDALGSCYGDKQGKKYRAWVDRLVVSQCGSEGWLVRFNLWE 375

Catalyzes the final step of sucrose synthesis. Inactive with fructose 6-phosphate as substrate.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q9SJ66|SPP2_ARATH Probable sucrose-phosphatase 2 OS=Arabidopsis thaliana GN=SPP2 PE=1 SV=2

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   +  G+  HPSGTE+S+   +D +   +GDKQGK++RVW D+V +       W+VK
Sbjct: 312 LKASVHPGGVFVHPSGTEKSLRDTIDELRKYHGDKQGKKFRVWADQVLATDTTPGTWIVK 371

Query: 61  FDKWE 65
            DKWE
Sbjct: 372 LDKWE 376

Catalyzes the final step of sucrose synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 3/66 (4%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLD-LMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLV 59
           +K   +  G I HP G+E+S+H  +D L+ + YGDK  K +RVWVDR+ ++ IG  +WL 
Sbjct: 326 LKSITHPNGTIIHPCGSERSLHASVDALLSSCYGDK--KNFRVWVDRLVTSPIGTSSWLA 383

Query: 60  KFDKWE 65
           +FD WE
Sbjct: 384 RFDSWE 389

Catalyzes the final step of sucrose synthesis. Inactive with fructose 6-phosphate as substrate.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

>sp|Q93XN8|SPP3B_ARATH Probable sucrose-phosphatase 3b OS=Arabidopsis thaliana GN=SPP3B PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 9   GIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSE 68
            ++ HPSG E+S+   +D ++  YGDK+GK++ VWVD+V         W+VKFDKWE  E
Sbjct: 321 AVLFHPSGAEKSLRDTIDELKKCYGDKRGKKFWVWVDQVLVTDTIPGKWIVKFDKWEQCE 380

Catalyzes the final step of sucrose synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
224097518	421	predicted protein [Populus trichocarpa]	0.512	0.144	0.639	2e-17
255546787	96	sucrose phosphate phosphatase, putative	0.647	0.802	0.564	1e-15
225447848	427	PREDICTED: sucrose-phosphatase 1-like [V	0.563	0.156	0.522	1e-15
296081519	425	unnamed protein product [Vitis vinifera]	0.563	0.157	0.522	1e-15
225439336	424	PREDICTED: sucrose-phosphatase 1 [Vitis	0.554	0.155	0.597	6e-15
46093880	430	sucrose phosphate phosphatase [Malus x d	0.521	0.144	0.596	1e-14
224091475	424	predicted protein [Populus trichocarpa]	0.563	0.158	0.597	2e-14
69205229	420	sucrose phosphate phosphatase [Saccharum	0.705	0.2	0.443	3e-14
224138242	425	predicted protein [Populus trichocarpa]	0.495	0.138	0.627	5e-14
242061676	423	hypothetical protein SORBIDRAFT_04g02018	0.705	0.198	0.443	9e-14

>gi|224097518|ref|XP_002310970.1| predicted protein [Populus trichocarpa] gi|222850790|gb|EEE88337.1| predicted protein [Populus trichocarpa]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 47/61 (77%)

Query: 6   YSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWE 65
           + LG   HPSG EQ ++ C+D+M  L+GDKQG  YR+WVDRVSSAQ+G D WLVKF KWE
Sbjct: 314 FPLGTFVHPSGVEQPVNHCIDVMARLHGDKQGTNYRIWVDRVSSAQVGSDTWLVKFYKWE 373

Query: 66  S 66
           S
Sbjct: 374 S 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546787|ref|XP_002514452.1| sucrose phosphate phosphatase, putative [Ricinus communis] gi|223546448|gb|EEF47948.1| sucrose phosphate phosphatase, putative [Ricinus communis]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 5  NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKW 64
           + LG   HPSG  QS+H C+D M  LYGD QGK Y VW+D VSSAQ+G D+WLVKF KW
Sbjct: 10 QFPLGTFVHPSGVHQSLHYCVDAMTRLYGDMQGKHYWVWLDLVSSAQVGSDSWLVKFYKW 69

Query: 65 E-SSECSPLHITLVLASA 81
          E S E     +T VL S+
Sbjct: 70 EISGEERQCCLTTVLLSS 87

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447848|ref|XP_002268435.1| PREDICTED: sucrose-phosphatase 1-like [Vitis vinifera]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 49/67 (73%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   +  G+  HPSG E+S+H C++ M + YGDKQG++++VWVDRVS  Q+  D W+VK
Sbjct: 314 LKVDYHPAGVFVHPSGVERSLHDCINAMRSCYGDKQGRKFQVWVDRVSPVQMSSDTWIVK 373

Query: 61  FDKWESS 67
           FDKWE S
Sbjct: 374 FDKWELS 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081519|emb|CBI20042.3| unnamed protein product [Vitis vinifera]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 49/67 (73%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   +  G+  HPSG E+S+H C++ M + YGDKQG++++VWVDRVS  Q+  D W+VK
Sbjct: 312 LKVDYHPAGVFVHPSGVERSLHDCINAMRSCYGDKQGRKFQVWVDRVSPVQMSSDTWIVK 371

Query: 61  FDKWESS 67
           FDKWE S
Sbjct: 372 FDKWELS 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439336|ref|XP_002269810.1| PREDICTED: sucrose-phosphatase 1 [Vitis vinifera] gi|147839687|emb|CAN77297.1| hypothetical protein VITISV_022385 [Vitis vinifera] gi|296089337|emb|CBI39109.3| unnamed protein product [Vitis vinifera]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   Y  G+  HPSG E+ +H C+  M+N YGDK+ K  RVWVDRVSSAQI  D WLVK
Sbjct: 312 LKAVCYPSGVFIHPSGVERPLHDCISAMKNCYGDKR-KSLRVWVDRVSSAQISSDTWLVK 370

Query: 61  FDKWESS 67
           FDKWE S
Sbjct: 371 FDKWELS 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|46093880|gb|AAS79793.1| sucrose phosphate phosphatase [Malus x domestica]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 47/62 (75%)

Query: 7   SLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWES 66
           S GI  HPSG +  +HQC+D +  L+GDKQGKQ+  W+DR+SS QIG +AWLVKF+KWE 
Sbjct: 324 SSGIFVHPSGVDLPIHQCIDSLARLHGDKQGKQFWTWLDRLSSVQIGSNAWLVKFNKWEL 383

Query: 67  SE 68
            E
Sbjct: 384 CE 385

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091475|ref|XP_002309266.1| predicted protein [Populus trichocarpa] gi|222855242|gb|EEE92789.1| predicted protein [Populus trichocarpa]

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 48/67 (71%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           MK    S GI+ HPSG E S+   L+ M + YGDKQG+++RVWVDRV S Q GLD WLVK
Sbjct: 312 MKADCDSSGILIHPSGAELSLCDALNEMRSYYGDKQGQKFRVWVDRVLSIQTGLDTWLVK 371

Query: 61  FDKWESS 67
           F+KWE S
Sbjct: 372 FNKWELS 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|69205229|gb|AAZ03743.1| sucrose phosphate phosphatase [Saccharum officinarum]

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 5   NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKW 64
            ++ G+I HP+G E S+H  +D + + YGDKQGK+YR WVDR++  Q G D+W+V+FD W
Sbjct: 312 THANGVIIHPAGLELSLHASIDALGSCYGDKQGKKYRAWVDRLAITQTGSDSWVVRFDLW 371

Query: 65  ESSE----CSPLHITLVLASAFWDLFVI 88
           ES      CS   + LVL +   + FV+
Sbjct: 372 ESEGDVRVCSLSSLALVLKAESPEGFVL 399

Source: Saccharum officinarum

Species: Saccharum officinarum

Genus: Saccharum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138242|ref|XP_002322765.1| predicted protein [Populus trichocarpa] gi|222867395|gb|EEF04526.1| predicted protein [Populus trichocarpa]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 43/59 (72%)

Query: 9   GIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESS 67
           GI+ HPSG E  +   +  M N YGDKQG+Q+RVWVDRV S Q GLD WLVKF+KWE S
Sbjct: 321 GILVHPSGAELPLCGAITGMRNYYGDKQGQQFRVWVDRVLSTQTGLDTWLVKFNKWELS 379

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242061676|ref|XP_002452127.1| hypothetical protein SORBIDRAFT_04g020180 [Sorghum bicolor] gi|241931958|gb|EES05103.1| hypothetical protein SORBIDRAFT_04g020180 [Sorghum bicolor]

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 5   NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKW 64
            ++ G+I HP+G E S+H  +D + + YGDKQGK+YR WVDR+   Q G D+W+V+FD W
Sbjct: 315 THANGVIIHPAGLELSLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 374

Query: 65  ESSE----CSPLHITLVLASAFWDLFVI 88
           ES      CS   + LVL +   + FV+
Sbjct: 375 ESEGDVRVCSLSSLALVLKAESPEGFVL 402

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
TAIR|locus:2080295	425	AT3G54270 [Arabidopsis thalian	0.571	0.16	0.5	5.8e-14
TAIR|locus:2039295	422	AT2G35840 [Arabidopsis thalian	0.546	0.154	0.430	6.8e-12
TAIR|locus:2033893	423	SPP1 "sucrose-phosphatase 1" [	0.563	0.158	0.402	1.4e-11
TAIR|locus:2100544	423	SPP2 "sucrose-6F-phosphate pho	0.495	0.139	0.457	8.3e-11

TAIR|locus:2080295 AT3G54270 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 5.8e-14, P = 5.8e-14
 Identities = 34/68 (50%), Positives = 47/68 (69%)

Query:     1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
             +K  +  LGI  HPSG E+ +H+ +D MENLYGD + K++R+W+D V+S+ I  D WL K
Sbjct:   314 LKSLSSPLGIFVHPSGVEKPIHEWIDEMENLYGDGKEKKFRIWLDNVTSSHISSDTWLAK 373

Query:    61 FDKWESSE 68
             F K E SE
Sbjct:   374 FVKHELSE 381

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005986 "sucrose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0050307 "sucrose-phosphate phosphatase activity" evidence=IEA;ISS

TAIR|locus:2039295 AT2G35840 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query:     1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
             +K   +  G+  HPSGTE+S+   +D +   +GDKQGK++RVW D+V +       W+VK
Sbjct:   312 LKASVHPGGVFVHPSGTEKSLRDTIDELRKYHGDKQGKKFRVWADQVLATDTTPGTWIVK 371

Query:    61 FDKWE 65
              DKWE
Sbjct:   372 LDKWE 376

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005986 "sucrose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0050307 "sucrose-phosphate phosphatase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2033893 SPP1 "sucrose-phosphatase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 27/67 (40%), Positives = 41/67 (61%)

Query:     1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
             +K   +  G+  HPSG E+S+   +D +   YGDK+GK++RVW D+V +       W+VK
Sbjct:   313 LKASCHPSGVFVHPSGAEKSLRDTIDELGKYYGDKKGKKFRVWTDQVLATDTTPGTWIVK 372

Query:    61 FDKWESS 67
              DKWE +
Sbjct:   373 LDKWEQT 379

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005986 "sucrose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0050307 "sucrose-phosphate phosphatase activity" evidence=IEA;ISS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2100544 SPP2 "sucrose-6F-phosphate phosphohydrolase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 8.3e-11, P = 8.3e-11
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query:    10 IIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSE 68
             ++ HPSG E+S+   +D ++  YGDK+GK++ VWVD+V         W+VKFDKWE  E
Sbjct:   322 VLFHPSGAEKSLRDTIDELKKCYGDKRGKKFWVWVDQVLVTDTIPGKWIVKFDKWEQCE 380


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.450    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       119   0.00091  102 3  11 22  0.44    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  161 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.73u 0.16s 11.89t   Elapsed:  00:00:01
  Total cpu time:  11.73u 0.16s 11.89t   Elapsed:  00:00:01
  Start:  Fri May 10 16:13:00 2013   End:  Fri May 10 16:13:01 2013

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005986 "sucrose biosynthetic process" evidence=IEA;ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0050307 "sucrose-phosphate phosphatase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_VIII000049	sucrose-phosphatase (EC-3.1.3.24) (421 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.II.3030.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)							•		0.717
	gw1.VIII.2574.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)							•		0.702
	estExt_Genewise1_v1.C_1520214	hypothetical protein (1049 aa)			•				•		0.498
	fgenesh4_pg.C_LG_XVIII000433	hypothetical protein (1054 aa)			•				•		0.495
	eugene3.00181112	hypothetical protein (1086 aa)			•				•		0.494
	gw1.XIV.2456.1	annotation not avaliable (186 aa)			•						0.478
	eugene3.00120074	sucrose synthase (EC-2.4.1.13) (800 aa)			•				•		0.432
	PtrSuSY1	sucrose synthase (EC-2.4.1.13) (805 aa)			•				•		0.433
	eugene3.00440147	sucrose synthase (EC-2.4.1.13) (815 aa)			•				•		0.430
	PtrSuSY2	sucrose synthase (EC-2.4.1.13) (803 aa)			•				•		0.430

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	119
pfam08472	133	pfam08472, S6PP_C, Sucrose-6-phosphate phosphohydr	1e-31
PLN02382	413	PLN02382, PLN02382, probable sucrose-phosphatase	5e-28

>gnl|CDD|192045 pfam08472, S6PP_C, Sucrose-6-phosphate phosphohydrolase C-terminal

 Score =  108 bits (271), Expect = 1e-31
 Identities = 37/68 (54%), Positives = 48/68 (70%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K   +  G+  HPSG E S+H  +D + + YGDKQGK++RVWVDRV + QIG D+WLVK
Sbjct: 51  LKAITHPSGVFIHPSGVELSLHDSIDALRSCYGDKQGKKFRVWVDRVLATQIGSDSWLVK 110

Query: 61  FDKWESSE 68
           FDKWE   
Sbjct: 111 FDKWELEG 118

This is the Sucrose-6-phosphate phosphohydrolase (S6PP or SPP) C-terminal domain as found in in plant sucrose phosphatases. These enzymes irreversibly catalyze the last step in sucrose synthesis following the formation of Sucrose-6-Phosphate via sucrose-phosphate synthase (SPS). Length = 133

>gnl|CDD|178008 PLN02382, PLN02382, probable sucrose-phosphatase

 Score =  105 bits (263), Expect = 5e-28
 Identities = 37/68 (54%), Positives = 48/68 (70%)

Query: 1   MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVK 60
           +K      G+  HPSG E+S+H  +D + + YGDK+GK++RVWVDRV S Q+G D WLVK
Sbjct: 312 LKSSCAPNGVFVHPSGVEKSLHDSIDELRSCYGDKKGKKFRVWVDRVLSTQLGPDTWLVK 371

Query: 61  FDKWESSE 68
           FDKWE S 
Sbjct: 372 FDKWEQSG 379

Length = 413

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
PF08472	133	S6PP_C: Sucrose-6-phosphate phosphohydrolase C-ter	100.0
PLN02382	413	probable sucrose-phosphatase	100.0

>PF08472 S6PP_C: Sucrose-6-phosphate phosphohydrolase C-terminal; InterPro: IPR013679 This is the Sucrose-6-phosphate phosphohydrolase (S6PP or SPP) C-terminal domain [] as found in plant sucrose phosphatases

Probab=100.00  E-value=3.7e-51  Score=306.90  Aligned_cols=82  Identities=50%  Similarity=0.848  Sum_probs=81.2

Q ss_pred             CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945            1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA   79 (119)
Q Consensus         1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll   79 (119)
                      ||+++||+|++|||||+|+|||++||+||+||||||||+||+|||||+++|+|+|+|||||||||++|+|| ||+|||+|
T Consensus        51 LK~~~~~~g~~vhPsGvE~slh~~Id~Lr~~yGdkqgK~frvWVDrv~~~~v~~~~WLvkFdkWE~sg~e~~cc~tT~ll  130 (133)
T PF08472_consen   51 LKSVCHPNGTFVHPSGVEKSLHDSIDALRSCYGDKQGKKFRVWVDRVRSTQVGSDTWLVKFDKWELSGEERRCCLTTALL  130 (133)
T ss_pred             hhhhhccCcCEEccccccccHHHHHHHHHHHhhhhcCcEEEEEEEeeeEEeecCccEEEEeeehhccCCeeEEEEEEEEE
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             ecc
Q 035945           80 SAF   82 (119)
Q Consensus        80 ~~k   82 (119)
                      ++|
T Consensus       131 ~~K  133 (133)
T PF08472_consen  131 SSK  133 (133)
T ss_pred             eeC
Confidence            987

These enzymes irreversibly catalyse the last step in sucrose synthesis following the formation of Sucrose-6-Phosphate via sucrose-phosphate synthase (SPS). ; GO: 0000287 magnesium ion binding, 0050307 sucrose-phosphate phosphatase activity, 0005986 sucrose biosynthetic process

>PLN02382 probable sucrose-phosphatase

Probab=100.00  E-value=2.3e-33  Score=233.42  Aligned_cols=84  Identities=48%  Similarity=0.836  Sum_probs=82.2

Q ss_pred             CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945            1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA   79 (119)
Q Consensus         1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll   79 (119)
                      ||+.++|+++||||+|+|.|+|++|+.||+|||+||||+||||||+|+.+++++++|||||||||++|+|| ||+|||+|
T Consensus       312 l~~~~~p~~~~v~p~G~~~~~~~~~~~~~~~~G~~~g~~~~i~vd~~~~~~~~~~~~~v~~~e~q~~~~~~~~~~ttavl  391 (413)
T PLN02382        312 LKSSCAPNGVFVHPSGVEKSLHDSIDELRSCYGDKKGKKFRVWVDRVLSTQLGPDTWLVKFDKWEQSGDERKCCLTTALL  391 (413)
T ss_pred             HHHhcCCCeeEECCCcccCCHHHHHHHHHHhhCCCCCCEEEEEEeeEEEEEEcCCeEEEEEeeeeecCCcceeEEEEEEE
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             ecccc
Q 035945           80 SAFWD   84 (119)
Q Consensus        80 ~~k~d   84 (119)
                      ++|.|
T Consensus       392 ~~~~~  396 (413)
T PLN02382        392 TSKED  396 (413)
T ss_pred             eeCCC
Confidence            99964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	119
1tp6_A	128	Hypothetical protein PA1314; structural genomics,	99.75
2r4i_A	123	Uncharacterized protein; NTF2-like protein, struct	90.97
3fsd_A	134	NTF2-like protein of unknown function in nutrient;	88.4

>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12

Probab=99.75  E-value=3e-18  Score=119.48  Aligned_cols=78  Identities=15%  Similarity=0.175  Sum_probs=75.2

Q ss_pred             CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945            1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA   79 (119)
Q Consensus         1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll   79 (119)
                      |++.++|+.++|+|+|.+.++++.++.++++||.++|  |++|||++...+.++|+|+|+|++|+..++++ ||.||++|
T Consensus        32 l~a~~a~d~~mv~p~G~~~g~~~~~~~~~~~~g~~pg--l~i~i~~l~~~~~~~d~~vv~y~~~~~~~~~~~~rrsT~v~  109 (128)
T 1tp6_A           32 LMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVL  109 (128)
T ss_dssp             HHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTT--CEEEEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHhcCCCEEEECCCCeECCHHHHHHHHHHhhCCCCC--eEEEEEEEEEEeecCCEEEEEEEEEeccCCceeEEEEEEEE
Confidence            4678999999999999999999999999999999998  99999999999999999999999999999988 99999999


Q ss_pred             e
Q 035945           80 S   80 (119)
Q Consensus        80 ~   80 (119)
                      +
T Consensus       110 ~  110 (128)
T 1tp6_A          110 H  110 (128)
T ss_dssp             E
T ss_pred             E
Confidence            5

>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15

Probab=90.97  E-value=0.75  Score=28.82  Aligned_cols=58  Identities=10%  Similarity=-0.128  Sum_probs=41.2

Q ss_pred             cccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceee
Q 035945            3 CQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWES   66 (119)
Q Consensus         3 s~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~   66 (119)
                      +.++|+-++|||+|...+-.+.|+.+++-.  .+..  ..=+..+....+|++..++-  .+..
T Consensus        29 ~l~~~d~~~~~~~G~~~~~~~~i~~~~~~~--~~~~--~~~~~~~~v~~~g~~a~~~~--~~~~   86 (123)
T 2r4i_A           29 VLLHDDLLFIIPSGETVTKETDIAAYSSGK--IALR--AVVPSDYIIRIIHDTVVVSV--NIEI   86 (123)
T ss_dssp             HHEEEEEEEECTTSCEECHHHHHHHHHTTC--EEEE--EEEEEEEEEEEETTEEEEEE--EEEE
T ss_pred             hhhCcCeEEECCCCCCccHHHHHHHHhcCC--eEEE--EEeecccEEEEECCEEEEEE--EEEE
Confidence            346788999999999888888898887532  1112  23356677788898888887  4443

>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0

Probab=88.40  E-value=1.1  Score=29.65  Aligned_cols=55  Identities=11%  Similarity=0.010  Sum_probs=39.7

Q ss_pred             cccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEE
Q 035945            3 CQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKF   61 (119)
Q Consensus         3 s~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKF   61 (119)
                      +.++|+-++|||+|...+-.+.|+.+++  |..+..+  .=+......-+|+|+=+|..
T Consensus        37 ~L~~~d~~~v~~~G~~~~~~~~l~~~~~--g~~~~~~--~~~~~~~v~~~g~d~Avv~~   91 (134)
T 3fsd_A           37 TLLADDLAFVDHTGCVKTKQTHLEPYRA--GLLKLSR--LDLSDAVVRAAGEDGRVVVV   91 (134)
T ss_dssp             HHEEEEEEEECTTSCEECHHHHHHHHHT--TCEEEEE--EEEEEEEEEESSTTEEEEEE
T ss_pred             hhcCCCEEEECCCCcCccHHHHHHHHHc--CCceEEE--EEEeccEEEEeCCCEEEEEE
Confidence            4578899999999999888889998874  3222223  33666777778887777754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	119
d1tp6a_	126	d.17.4.12 (A:) Hypothetical protein PA1314 {Pseudo	7e-12

>d1tp6a_ d.17.4.12 (A:) Hypothetical protein PA1314 {Pseudomonas aeruginosa [TaxId: 287]} Length = 126

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PA1314-like
domain: Hypothetical protein PA1314
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 55.5 bits (134), Expect = 7e-12
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 13 HPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSE 68
           P G         +L  +  G + G   R+ +D  S    G+D   + + + +S  
Sbjct: 42 TPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDA 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	119
d1tp6a_	126	Hypothetical protein PA1314 {Pseudomonas aeruginos	99.88
d2r4ia1	122	Uncharacterized protein CHU142 {Cytophaga hutchins	82.33

>d1tp6a_ d.17.4.12 (A:) Hypothetical protein PA1314 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PA1314-like
domain: Hypothetical protein PA1314
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=3.9e-23  Score=148.78  Aligned_cols=81  Identities=15%  Similarity=0.127  Sum_probs=77.4

Q ss_pred             CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945            1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA   79 (119)
Q Consensus         1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll   79 (119)
                      ||+.++|+.+||||+|++.++++.++.++++||+++|  |+||||+|+..+.+++.|+|+|++||++++++ ||.|||+|
T Consensus        30 L~a~f~p~FsMV~~~G~~l~~~~~~~~f~~~~G~rpG--l~I~id~~~~~~~~~~~~vv~Y~E~q~~~~~~~~R~STavl  107 (126)
T d1tp6a_          30 LMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVL  107 (126)
T ss_dssp             HHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTT--CEEEEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHhcCCCcEEECCCCeEcCHHHHHHHHHHhcCCCCc--cEEEEEEEEEEEEeCCeEEEEEEEEEecCCcceEEEEEEEE
Confidence            5788999999999999999999999999999999999  99999999999999999999999999999999 99999999


Q ss_pred             eccc
Q 035945           80 SAFW   83 (119)
Q Consensus        80 ~~k~   83 (119)
                      +.+.
T Consensus       108 ~~~~  111 (126)
T d1tp6a_         108 HRDD  111 (126)
T ss_dssp             EECT
T ss_pred             EEcC
Confidence            8643

>d2r4ia1 d.17.4.15 (A:1-122) Uncharacterized protein CHU142 {Cytophaga hutchinsonii [TaxId: 985]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: CHU142-like
domain: Uncharacterized protein CHU142
species: Cytophaga hutchinsonii [TaxId: 985]

Probab=82.33  E-value=3.3  Score=24.52  Aligned_cols=29  Identities=10%  Similarity=0.020  Sum_probs=24.3

Q ss_pred             ccccCCCCcEEccCCCccchHHHHHHhHh
Q 035945            2 KCQNYSLGIIAHPSGTEQSMHQCLDLMEN   30 (119)
Q Consensus         2 Ks~~~p~gt~VHPsGvE~sLh~~Id~Lr~   30 (119)
                      ++.++|+.+++||+|...+-.+.|+.++.
T Consensus        27 ~~l~~~d~~~~~~~G~~~~~~~~i~~~~~   55 (122)
T d2r4ia1          27 EVLLHDDLLFIIPSGETVTKETDIAAYSS   55 (122)
T ss_dssp             HHHEEEEEEEECTTSCEECHHHHHHHHHT
T ss_pred             HhhhcccEEEEeccceeccHHHHHHHHhc
Confidence            34578999999999988888888888875