Citrus Sinensis ID: 035977

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Secondary Structure (PSIPRED)
cccccccccEEccccccccccEEEEEEEccEEcccccEEcccccccccEEEEEccccccEEEEEEEcccccccccccccEEEEEEEEcccccccccccEEEEEEcccccccccccEEEEEEEcccccccccccccccccHHHHHHHHcccccEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEccEEccccccccccEEEEEEEccEEEEcccEcccccEccccEEEEcccccccEEEEEEEcccccccccccHHHHHHEEEEccccccccccccEEEEcccccccccHEEEEEEEEEccccEEEccccccccccHHHHHHHHcccccEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
mleplavggviGDVIesftpsikmsvtynnkqvcnghelfpstvvskprveiqggdmrSFFTLvmtdpdvpgpsdpylrEHLHWIVtdipgttdatfgrelvsyeiprpnigiHRFVFVLFKqtrrqtvnppssrdhfntRAFAAENDLGLPVAAVYFNAQRETAARRR
Flexible Loop (DISEMBL)
mleplavggvIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYeiprpnigIHRFVFVLFKQTrrqtvnppssrdhfNTRAFAAENDLGLPVAAVYFNAQretaarrr
Low Complexity Region (SEG)
MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Disordered region (IsUnstruct)
****LAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQT***************TRAFAAENDLGLPVAAVYFN**********
Disordered Region (DISOPRED)
MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQT************HFNTRAFAAENDLGLPVAAVYFNAQRE******
Disordered Region (DISEMBL)
MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTR*********RDHFNTRAFAAENDLGLPVAAVYFNAQ********
Disordered Region (DISPRO)
**EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQR*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
P93003	177	Protein TERMINAL FLOWER 1	yes	no	1.0	0.954	0.752	2e-73
Q9XH43	175	CEN-like protein 2 OS=Nic	N/A	no	1.0	0.965	0.754	3e-73
Q9XH42	175	CEN-like protein 4 OS=Nic	N/A	no	1.0	0.965	0.748	8e-73
O82088	175	Protein SELF-PRUNING OS=S	N/A	no	1.0	0.965	0.736	2e-72
Q9ZNV5	175	Protein CENTRORADIALIS-li	no	no	0.988	0.954	0.757	6e-72
Q9XH44	174	CEN-like protein 1 OS=Nic	N/A	no	1.0	0.971	0.711	3e-70
Q41261	181	Protein CENTRORADIALIS OS	N/A	no	0.988	0.922	0.724	8e-70
Q9FIT4	177	Protein BROTHER of FT and	no	no	0.994	0.949	0.664	3e-60
Q93WI9	179	Protein HEADING DATE 3A O	no	no	0.988	0.932	0.604	6e-55
Q9SXZ2	175	Protein FLOWERING LOCUS T	no	no	0.988	0.954	0.586	2e-52

>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1

 Score =  274 bits (700), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/170 (75%), Positives = 152/170 (89%), Gaps = 1/170 (0%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           ++EPL +G V+GDV++ FTP+ KM+V+YN KQV NGHELFPS+V SKPRVEI GGD+RSF
Sbjct: 8   VIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSF 67

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVM DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFG+E+VSYE+PRP+IGIHRFVFVL
Sbjct: 68  FTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVL 127

Query: 121 FKQTRRQTVNPP-SSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F+Q +R+ + P   SRDHFNTR FA E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 128 FRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

Controls inflorescence meristem identity and is required for maintenance of a indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1

 Score =  273 bits (699), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 149/171 (87%), Gaps = 2/171 (1%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGDMRS 59
           M +PL +G VIG+V++ FTPS+KMSVTYN+ K V NGHELFPS+V SKPRVE+ GGD+RS
Sbjct: 5   MSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRS 64

Query: 60  FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFV 119
           FFT++M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+E+V YE+PRPNIGIHRFVF+
Sbjct: 65  FFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFL 124

Query: 120 LFKQTRRQTV-NPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           LFKQ +RQTV   P SRD FNTR FA EN+LG PVAAV+FN QRETAARRR
Sbjct: 125 LFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1

 Score =  272 bits (695), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 149/171 (87%), Gaps = 2/171 (1%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGDMRS 59
           M +PL +G VIG+V++ FTPS+KMSVTYN+ K V NGHELFPS+V SKPRVE+ GGD+RS
Sbjct: 5   MSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRS 64

Query: 60  FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFV 119
           FFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FGRE+V YE+PRPNIGIHRFVF+
Sbjct: 65  FFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFL 124

Query: 120 LFKQTRRQT-VNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           LFKQ +RQT ++ P SRD FNTR F+ EN+LG PVAA +FN QRETAARRR
Sbjct: 125 LFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1

 Score =  271 bits (692), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 126/171 (73%), Positives = 147/171 (85%), Gaps = 2/171 (1%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGDMRS 59
           M EPL +G VIG+V++ F PS+KMSV YNN K V NGHE FPS+V SKPRVE+ GGD+RS
Sbjct: 5   MCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRS 64

Query: 60  FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFV 119
           FFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FGRE+V YE+PRPNIGIHRFVF+
Sbjct: 65  FFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFL 124

Query: 120 LFKQTRRQTV-NPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           LFKQ +RQT+ + P SRD F++R F+ EN+LG PVAAV+FN QRETAARRR
Sbjct: 125 LFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

Not known. In plants homozygous for the recessive allele of the SP gene, sympodial segments develop progressively fewer nodes until the shoot is terminated by two consecutive. inflorescences.

Solanum lycopersicum (taxid: 4081)

>sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1

 Score =  269 bits (688), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 128/169 (75%), Positives = 147/169 (86%), Gaps = 2/169 (1%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRSFF 61
           +PL VG VIGDV+++   ++KM+VTYN +KQV NGHELFPS V  KP+VE+ GGDMRSFF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 62  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLF 121
           TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+E++ YE+PRPNIGIHRFV++LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 122 KQTRR-QTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           KQTRR   V+ PS RD FNTR FA ENDLGLPVAAV+FN QRETAARRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XH44|CET1_TOBAC CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1

 Score =  263 bits (672), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 121/170 (71%), Positives = 147/170 (86%), Gaps = 1/170 (0%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRS 59
           ++EPL V  VIG+V++SF PS+K++V YN +KQV NGHEL P+ + +KPRVEI G DMRS
Sbjct: 5   VVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDMRS 64

Query: 60  FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFV 119
            +TL+MTDPDVPGPSDPYLREHLHWIVTDIPG+TD++FGRE+VSYE P+P IGIHR+V +
Sbjct: 65  AYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRYVLL 124

Query: 120 LFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           L+KQ+ RQTV P ++RDHFNTR + AEN LG PVAAVYFNAQRETAARRR
Sbjct: 125 LYKQSGRQTVKPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q41261|CEN_ANTMA Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1

 Score =  262 bits (669), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 126/174 (72%), Positives = 146/174 (83%), Gaps = 7/174 (4%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNN----KQVCNGHELFPSTVVSKPRVEIQGGDMR 58
           +PL +G VIGDV++ FT ++KMSV YN+    K V NGHELFPS V S PRVE+ GGDMR
Sbjct: 8   DPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMR 67

Query: 59  SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVF 118
           SFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FG+E+VSYE+PRPNIGIHRFVF
Sbjct: 68  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVF 127

Query: 119 VLFKQTRR--QTVNPP-SSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           +LFKQ +R    ++PP   RD FNTR F  EN+LGLPVAAV+FN QRETAARRR
Sbjct: 128 LLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

Expression of CEN leads to a morphological switch between shoot growth and the development of flower structures (inflorescence). May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Antirrhinum majus (taxid: 4151)

>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1

 Score =  230 bits (587), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/170 (66%), Positives = 133/170 (78%), Gaps = 2/170 (1%)

Query: 2   LEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           +EPL VG VIGDV+E F PS+ M VT+N N  V NGHEL PS ++SKPRVEI G D+RSF
Sbjct: 5   IEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSF 64

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTL+M DPD P PS+PY+RE+LHW+VTDIPGTTDA+FGRE+V YE P+P  GIHR+VF L
Sbjct: 65  FTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFAL 124

Query: 121 FKQTRRQTVN-PPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQ  RQ V   P +R+ FNT AF++   L  PVAAVYFNAQRETA RRR
Sbjct: 125 FKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1

 Score =  213 bits (541), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 101/167 (60%), Positives = 124/167 (74%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL VG V+GDV+++F  S  + VTY +K V NG EL PS V  +PRVE+ G DMR+F+T
Sbjct: 9   DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYT 68

Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPD P PSDP LRE+LHW+VTDIPGTT A+FG+E++ YE PRP +GIHR VFVLF+
Sbjct: 69  LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQ 128

Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           Q  RQTV  P  R +FNT+ FA   +LG PVAAVYFN QRE  +  R
Sbjct: 129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2

 Score =  204 bits (518), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/167 (58%), Positives = 122/167 (73%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL V  V+GDV++ F  SI + VTY  ++V NG +L PS V +KPRVEI G D+R+F+T
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYT 66

Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPDVP PS+P+LRE+LHW+VTDIP TT  TFG E+V YE P P  GIHR VF+LF+
Sbjct: 67  LVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFR 126

Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           Q  RQTV  P  R +FNTR FA   +LGLPVAAV++N QRE+    R
Sbjct: 127 QLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

Probable component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. May play a role in both the autonomous and the long-day flowering pathways.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
37887002	173	terminal flower [Citrus sinensis] gi|378	1.0	0.976	0.994	4e-94
166850552	173	CTRSTFL-like protein [Citrus trifoliata]	1.0	0.976	0.994	7e-94
166850554	173	CTRSTFL-like protein [Citrus trifoliata]	1.0	0.976	0.988	5e-93
375173410	172	TFL1-like protein [Fragaria x ananassa]	1.0	0.982	0.881	3e-84
309296901	172	TFL1-like protein [Fragaria vesca] gi|34	1.0	0.982	0.875	5e-84
347015065	172	TFL1-like protein [Fragaria vesca]	1.0	0.982	0.869	1e-83
42491314	172	TFL1-like protein [Eriobotrya japonica]	0.994	0.976	0.869	4e-82
302562827	172	TFL1-like protein [Prunus mume] gi|34701	1.0	0.982	0.846	5e-82
359481587	172	PREDICTED: protein TERMINAL FLOWER 1 [Vi	1.0	0.982	0.840	5e-82
255046063	173	terminal flowering 1-like protein 1 [Gly	0.994	0.971	0.857	9e-82

>gi|37887002|gb|AAR04683.1| terminal flower [Citrus sinensis] gi|37887020|gb|AAR04684.1| terminal flower [Citrus sinensis]

 Score =  348 bits (893), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 168/169 (99%), Positives = 169/169 (100%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           MLEPLAVGGVIGDVIESFTPSIKMSVTY+NKQVCNGHELFPSTVVSKPRVEIQGGDMRSF
Sbjct: 5   MLEPLAVGGVIGDVIESFTPSIKMSVTYDNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 64

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL
Sbjct: 65  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 124

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 125 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 173

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166850552|gb|ABY91242.1| CTRSTFL-like protein [Citrus trifoliata]

 Score =  347 bits (891), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 168/169 (99%), Positives = 168/169 (99%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           MLEPLAVG VIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF
Sbjct: 5   MLEPLAVGRVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 64

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL
Sbjct: 65  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 124

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 125 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 173

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166850554|gb|ABY91243.1| CTRSTFL-like protein [Citrus trifoliata]

 Score =  345 bits (884), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 167/169 (98%), Positives = 167/169 (98%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           MLEPLAVG VIGDVIESFTPSIK SVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF
Sbjct: 5   MLEPLAVGRVIGDVIESFTPSIKKSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 64

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL
Sbjct: 65  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 124

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 125 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 173

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|375173410|gb|AFA42328.1| TFL1-like protein [Fragaria x ananassa] gi|375330868|gb|AFA52237.1| TFL1-like protein [Fragaria x ananassa]

 Score =  315 bits (808), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 149/169 (88%), Positives = 158/169 (93%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           M EPLAVG VIGDV++SFTP+ KM VTYN K VCNGHELFPS V +KPRVEIQGGDMRSF
Sbjct: 4   MSEPLAVGRVIGDVLDSFTPTTKMIVTYNTKLVCNGHELFPSAVTAKPRVEIQGGDMRSF 63

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYL+EHLHWIVTDIPGTTDATFGRE+VSYE+PRPNIGIHRFVFVL
Sbjct: 64  FTLVMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRFVFVL 123

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F Q RRQ+VNPPSSRDHFNTR FAAENDLG+PVAAVYFNAQRETAARRR
Sbjct: 124 FMQKRRQSVNPPSSRDHFNTRTFAAENDLGVPVAAVYFNAQRETAARRR 172

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|309296901|gb|ADO64258.1| TFL1-like protein [Fragaria vesca] gi|347803328|gb|AEP23097.1| terminal flower 1 [Fragaria vesca]

 Score =  315 bits (806), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 148/169 (87%), Positives = 159/169 (94%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           M EPLAVG VIGDV++SFTP+ KM V+YN+K VCNGHELFPS V +KPRVEIQGGDMRSF
Sbjct: 4   MSEPLAVGRVIGDVLDSFTPTTKMIVSYNSKLVCNGHELFPSAVTAKPRVEIQGGDMRSF 63

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYL+EHLHWIVTDIPGTTDATFGRE+VSYE+PRPNIGIHRFVFVL
Sbjct: 64  FTLVMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRFVFVL 123

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F Q RRQ+VNPPSSRDHFNTR FAAENDLG+PVAAVYFNAQRETAARRR
Sbjct: 124 FMQKRRQSVNPPSSRDHFNTRTFAAENDLGVPVAAVYFNAQRETAARRR 172

Source: Fragaria vesca

Species: Fragaria vesca

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347015065|gb|AEO72027.1| TFL1-like protein [Fragaria vesca]

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/169 (86%), Positives = 159/169 (94%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           M EPLAVG VIGDV++SFTP+ KM V+YN+K VCNGHELFPS V +KPRVEIQGGDMRSF
Sbjct: 4   MSEPLAVGRVIGDVLDSFTPTTKMIVSYNSKLVCNGHELFPSAVTAKPRVEIQGGDMRSF 63

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYL+EHLHWIVTDIPGTTDATFGRE+VSYE+PRPNIGIHRFVFVL
Sbjct: 64  FTLVMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRFVFVL 123

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F Q RRQ++NPPSSRDHFNTR FAAENDLG+PVAAVYFNAQRETAARRR
Sbjct: 124 FMQKRRQSMNPPSSRDHFNTRTFAAENDLGVPVAAVYFNAQRETAARRR 172

Source: Fragaria vesca

Species: Fragaria vesca

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42491314|dbj|BAD10966.1| TFL1-like protein [Eriobotrya japonica] gi|284517560|gb|ADB92194.1| TFL1-like protein [Eriobotrya japonica]

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 146/168 (86%), Positives = 156/168 (92%)

Query: 2   LEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFF 61
           LEPL VG VIGDV++SFT + KMSVTYN K VCNG ELFPS V +KPRVEIQGGDMRSFF
Sbjct: 5   LEPLVVGRVIGDVLDSFTATTKMSVTYNTKLVCNGLELFPSVVTAKPRVEIQGGDMRSFF 64

Query: 62  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLF 121
           TLVMTDPD PGPSDPYLREHLHWIVTDIPGTTDATFGRE+VSYE+PRPNIGIHRFVFVLF
Sbjct: 65  TLVMTDPDFPGPSDPYLREHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRFVFVLF 124

Query: 122 KQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           KQ RRQ++N PSSRDHF+TR+FAAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 125 KQNRRQSINTPSSRDHFSTRSFAAENDLGLPVAAVYFNAQRETAARRR 172

Source: Eriobotrya japonica

Species: Eriobotrya japonica

Genus: Eriobotrya

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302562827|dbj|BAJ14521.1| TFL1-like protein [Prunus mume] gi|347015053|gb|AEO72021.1| TFL1-like protein [Prunus mume]

 Score =  308 bits (789), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 143/169 (84%), Positives = 157/169 (92%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           M EPL VG VIGDV++ FTP+ KMSVTYN + VCNG+EL+PS V +KPRVEIQGGDMR+F
Sbjct: 4   MSEPLVVGRVIGDVLDCFTPTTKMSVTYNTRLVCNGYELYPSAVTTKPRVEIQGGDMRTF 63

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRE+VSYE+PRPNIGIHRFVFVL
Sbjct: 64  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRFVFVL 123

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQ RRQ+VNPPSSRDHF+ R+FAAENDLGLPVAAVYFN QRETAARRR
Sbjct: 124 FKQRRRQSVNPPSSRDHFSARSFAAENDLGLPVAAVYFNCQRETAARRR 172

Source: Prunus mume

Species: Prunus mume

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481587|ref|XP_003632644.1| PREDICTED: protein TERMINAL FLOWER 1 [Vitis vinifera] gi|115503906|gb|ABI99467.1| TFL1B protein [Vitis vinifera] gi|147790330|emb|CAN61194.1| hypothetical protein VITISV_028345 [Vitis vinifera] gi|297740103|emb|CBI30285.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (789), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 142/169 (84%), Positives = 161/169 (95%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           +LEPL VG VIGDV++ F P+IKM+VTY+NKQ+CNG+EL+PS++  KPRVE+QGGD+RSF
Sbjct: 4   ILEPLIVGRVIGDVLDPFPPTIKMTVTYHNKQICNGYELYPSSITVKPRVEVQGGDLRSF 63

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRE++SYEIP+PNIGIHRFVFVL
Sbjct: 64  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVLSYEIPKPNIGIHRFVFVL 123

Query: 121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           FKQ RRQTVN P+SRDHFNTR+FAAENDLGLPVAAV+FNAQRETAARRR
Sbjct: 124 FKQKRRQTVNTPTSRDHFNTRSFAAENDLGLPVAAVFFNAQRETAARRR 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255046063|gb|ACU00123.1| terminal flowering 1-like protein 1 [Glycine max] gi|294715630|gb|ADF30893.1| Dt1 [Glycine max] gi|294715632|gb|ADF30894.1| Dt1 [Glycine max] gi|294715638|gb|ADF30897.1| Dt1 [Glycine max] gi|294715640|gb|ADF30898.1| Dt1 [Glycine max] gi|294715644|gb|ADF30900.1| Dt1 [Glycine max] gi|294715646|gb|ADF30901.1| Dt1 [Glycine max] gi|294715650|gb|ADF30903.1| Dt1 [Glycine max] gi|294715656|gb|ADF30906.1| Dt1 [Glycine max] gi|294715658|gb|ADF30907.1| Dt1 [Glycine max] gi|294715660|gb|ADF30908.1| Dt1 [Glycine max] gi|294715666|gb|ADF30911.1| Dt1 [Glycine max] gi|294715668|gb|ADF30912.1| Dt1 [Glycine max] gi|294715670|gb|ADF30913.1| Dt1 [Glycine max] gi|294715674|gb|ADF30915.1| Dt1 [Glycine max] gi|294715676|gb|ADF30916.1| Dt1 [Glycine max] gi|294715678|gb|ADF30917.1| Dt1 [Glycine max] gi|294715682|gb|ADF30919.1| Dt1 [Glycine max] gi|294715688|gb|ADF30922.1| Dt1 [Glycine max] gi|294715696|gb|ADF30926.1| Dt1 [Glycine max] gi|294715700|gb|ADF30928.1| Dt1 [Glycine max] gi|294715706|gb|ADF30931.1| Dt1 [Glycine max] gi|294715718|gb|ADF30937.1| Dt1 [Glycine max] gi|294715722|gb|ADF30939.1| Dt1 [Glycine max] gi|294715724|gb|ADF30940.1| Dt1 [Glycine max] gi|294715726|gb|ADF30941.1| Dt1 [Glycine max] gi|294715736|gb|ADF30946.1| Dt1 [Glycine max] gi|294715738|gb|ADF30947.1| Dt1 [Glycine max] gi|294715752|gb|ADF30954.1| Dt1 [Glycine max] gi|294715756|gb|ADF30956.1| Dt1 [Glycine max] gi|294715758|gb|ADF30957.1| Dt1 [Glycine max] gi|294715772|gb|ADF30964.1| Dt1 [Glycine max] gi|294715776|gb|ADF30966.1| Dt1 [Glycine max] gi|294715778|gb|ADF30967.1| Dt1 [Glycine max] gi|294715782|gb|ADF30969.1| Dt1 [Glycine max] gi|294715786|gb|ADF30971.1| Dt1 [Glycine max] gi|294715790|gb|ADF30973.1| Dt1 [Glycine max] gi|294715792|gb|ADF30974.1| Dt1 [Glycine max] gi|294715796|gb|ADF30976.1| Dt1 [Glycine max] gi|294715800|gb|ADF30978.1| Dt1 [Glycine max] gi|294715802|gb|ADF30979.1| Dt1 [Glycine max] gi|294715804|gb|ADF30980.1| Dt1 [Glycine max] gi|294715806|gb|ADF30981.1| Dt1 [Glycine soja] gi|294715808|gb|ADF30982.1| Dt1 [Glycine soja] gi|294715810|gb|ADF30983.1| Dt1 [Glycine soja] gi|294715812|gb|ADF30984.1| Dt1 [Glycine soja] gi|294715814|gb|ADF30985.1| Dt1 [Glycine soja] gi|294715816|gb|ADF30986.1| Dt1 [Glycine soja] gi|294715818|gb|ADF30987.1| Dt1 [Glycine soja] gi|294715820|gb|ADF30988.1| Dt1 [Glycine soja] gi|294715822|gb|ADF30989.1| Dt1 [Glycine soja] gi|294715824|gb|ADF30990.1| Dt1 [Glycine soja] gi|294715826|gb|ADF30991.1| Dt1 [Glycine soja] gi|294715828|gb|ADF30992.1| Dt1 [Glycine soja] gi|294715830|gb|ADF30993.1| Dt1 [Glycine soja] gi|294715832|gb|ADF30994.1| Dt1 [Glycine soja] gi|294715834|gb|ADF30995.1| Dt1 [Glycine soja] gi|294715836|gb|ADF30996.1| Dt1 [Glycine soja] gi|294715838|gb|ADF30997.1| Dt1 [Glycine soja] gi|294715840|gb|ADF30998.1| Dt1 [Glycine soja] gi|294715842|gb|ADF30999.1| Dt1 [Glycine soja] gi|294715844|gb|ADF31000.1| Dt1 [Glycine soja] gi|294715848|gb|ADF31002.1| Dt1 [Glycine max] gi|294715850|gb|ADF31003.1| Dt1 [Glycine max] gi|294715852|gb|ADF31004.1| Dt1 [Glycine max] gi|294715854|gb|ADF31005.1| Dt1 [Glycine max] gi|294715860|gb|ADF31008.1| Dt1 [Glycine max] gi|294715862|gb|ADF31009.1| Dt1 [Glycine max] gi|294715864|gb|ADF31010.1| Dt1 [Glycine max] gi|294715866|gb|ADF31011.1| Dt1 [Glycine max] gi|294715870|gb|ADF31013.1| Dt1 [Glycine max] gi|294715872|gb|ADF31014.1| Dt1 [Glycine max] gi|294715876|gb|ADF31016.1| Dt1 [Glycine max] gi|294715878|gb|ADF31017.1| Dt1 [Glycine max] gi|294715884|gb|ADF31020.1| Dt1 [Glycine max] gi|294715886|gb|ADF31021.1| Dt1 [Glycine max] gi|294715894|gb|ADF31025.1| Dt1 [Glycine max] gi|294715896|gb|ADF31026.1| Dt1 [Glycine max] gi|294715898|gb|ADF31027.1| Dt1 [Glycine max] gi|294715906|gb|ADF31031.1| Dt1 [Glycine max] gi|294715912|gb|ADF31034.1| Dt1 [Glycine max] gi|294715922|gb|ADF31039.1| Dt1 [Glycine max] gi|294715924|gb|ADF31040.1| Dt1 [Glycine max] gi|294715926|gb|ADF31041.1| Dt1 [Glycine max] gi|294715934|gb|ADF31045.1| Dt1 [Glycine max] gi|294715944|gb|ADF31050.1| Dt1 [Glycine max] gi|294715946|gb|ADF31051.1| Dt1 [Glycine max] gi|294715948|gb|ADF31052.1| Dt1 [Glycine max] gi|294715950|gb|ADF31053.1| Dt1 [Glycine max] gi|294715952|gb|ADF31054.1| Dt1 [Glycine max] gi|294715954|gb|ADF31055.1| Dt1 [Glycine max] gi|294715956|gb|ADF31056.1| Dt1 [Glycine max] gi|294715960|gb|ADF31058.1| Dt1 [Glycine max] gi|294715964|gb|ADF31060.1| Dt1 [Glycine max] gi|294715968|gb|ADF31062.1| Dt1 [Glycine max] gi|294715970|gb|ADF31063.1| Dt1 [Glycine max] gi|294715972|gb|ADF31064.1| Dt1 [Glycine max] gi|294715974|gb|ADF31065.1| Dt1 [Glycine max] gi|294715976|gb|ADF31066.1| Dt1 [Glycine max] gi|294715978|gb|ADF31067.1| Dt1 [Glycine max] gi|294715982|gb|ADF31069.1| Dt1 [Glycine max] gi|294715984|gb|ADF31070.1| Dt1 [Glycine max] gi|294715990|gb|ADF31073.1| Dt1 [Glycine max] gi|294716000|gb|ADF31078.1| Dt1 [Glycine max] gi|294716010|gb|ADF31083.1| Dt1 [Glycine max] gi|294716034|gb|ADF31095.1| Dt1 [Glycine max] gi|294716048|gb|ADF31102.1| Dt1 [Glycine max] gi|294716064|gb|ADF31110.1| Dt1 [Glycine max] gi|294716066|gb|ADF31111.1| Dt1 [Glycine max] gi|294716068|gb|ADF31112.1| Dt1 [Glycine max] gi|294716070|gb|ADF31113.1| Dt1 [Glycine max] gi|294716072|gb|ADF31114.1| Dt1 [Glycine max] gi|294716074|gb|ADF31115.1| Dt1 [Glycine max] gi|294716078|gb|ADF31117.1| Dt1 [Glycine max] gi|294716080|gb|ADF31118.1| Dt1 [Glycine max] gi|294716086|gb|ADF31121.1| Dt1 [Glycine max] gi|294716092|gb|ADF31124.1| Dt1 [Glycine max] gi|294716094|gb|ADF31125.1| Dt1 [Glycine max] gi|294716098|gb|ADF31127.1| Dt1 [Glycine max] gi|294716102|gb|ADF31129.1| Dt1 [Glycine max] gi|294716104|gb|ADF31130.1| Dt1 [Glycine max] gi|294716108|gb|ADF31132.1| Dt1 [Glycine max] gi|294716118|gb|ADF31137.1| Dt1 [Glycine max] gi|294716120|gb|ADF31138.1| Dt1 [Glycine max] gi|294716122|gb|ADF31139.1| Dt1 [Glycine max] gi|294716124|gb|ADF31140.1| Dt1 [Glycine max] gi|294716126|gb|ADF31141.1| Dt1 [Glycine max] gi|294716128|gb|ADF31142.1| Dt1 [Glycine max] gi|294716136|gb|ADF31146.1| Dt1 [Glycine max] gi|294716140|gb|ADF31148.1| Dt1 [Glycine max] gi|294716142|gb|ADF31149.1| Dt1 [Glycine max] gi|294716144|gb|ADF31150.1| Dt1 [Glycine max] gi|294716150|gb|ADF31153.1| Dt1 [Glycine max] gi|294716152|gb|ADF31154.1| Dt1 [Glycine max] gi|294716156|gb|ADF31156.1| Dt1 [Glycine max] gi|294716158|gb|ADF31157.1| Dt1 [Glycine max] gi|294716166|gb|ADF31161.1| Dt1 [Glycine max] gi|294716170|gb|ADF31163.1| Dt1 [Glycine max] gi|294716172|gb|ADF31164.1| Dt1 [Glycine max] gi|294716182|gb|ADF31169.1| Dt1 [Glycine max] gi|294716190|gb|ADF31173.1| Dt1 [Glycine max] gi|294716198|gb|ADF31177.1| Dt1 [Glycine max] gi|294716200|gb|ADF31178.1| Dt1 [Glycine max] gi|294716204|gb|ADF31180.1| Dt1 [Glycine max] gi|294716206|gb|ADF31181.1| Dt1 [Glycine max] gi|294716210|gb|ADF31183.1| Dt1 [Glycine max] gi|294716218|gb|ADF31187.1| Dt1 [Glycine max] gi|294716220|gb|ADF31188.1| Dt1 [Glycine max] gi|294716228|gb|ADF31192.1| Dt1 [Glycine max] gi|294716230|gb|ADF31193.1| Dt1 [Glycine max] gi|294716232|gb|ADF31194.1| Dt1 [Glycine max] gi|294716234|gb|ADF31195.1| Dt1 [Glycine max]

 Score =  307 bits (787), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 144/168 (85%), Positives = 157/168 (93%)

Query: 2   LEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFF 61
           LEPL VG VIG+V++SFT S KM+V+YN KQV NGHELFPSTV +KP+VEI+GGDMRSFF
Sbjct: 6   LEPLIVGRVIGEVLDSFTTSTKMTVSYNKKQVYNGHELFPSTVNTKPKVEIEGGDMRSFF 65

Query: 62  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLF 121
           TL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFG+ELVSYE+P+PNIGIHRFVFVLF
Sbjct: 66  TLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEVPKPNIGIHRFVFVLF 125

Query: 122 KQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           KQ RRQ V PP+SRDHFNTR FAAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 126 KQKRRQCVTPPTSRDHFNTRKFAAENDLGLPVAAVYFNAQRETAARRR 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
UNIPROTKB|Q9XGS5	173	Fdr2 "Cen-like protein FDR2" [	0.994	0.971	0.822	2.2e-73
UNIPROTKB|Q9XGS4	173	Fdr1 "Cen-like protein FDR1" [	0.994	0.971	0.828	5.9e-73
UNIPROTKB|Q6ESF8	173	P0605D08.14 "Os02g0531600 prot	1.0	0.976	0.788	6.7e-72
TAIR|locus:2150595	177	TFL1 "TERMINAL FLOWER 1" [Arab	1.0	0.954	0.752	1.3e-68
TAIR|locus:2038643	175	ATC "centroradialis" [Arabidop	0.988	0.954	0.757	1.5e-67
TAIR|locus:2174058	177	BFT "brother of FT and TFL1" [	0.994	0.949	0.664	1.2e-56
UNIPROTKB|Q93WI9	179	HD3A "Protein HEADING DATE 3A"	0.988	0.932	0.604	4e-51
UNIPROTKB|Q93WM7	179	Hd3a "Hd3a protein" [Oryza sat	0.988	0.932	0.604	4e-51
TAIR|locus:2034168	175	FT "AT1G65480" [Arabidopsis th	0.988	0.954	0.586	1.5e-49
TAIR|locus:2005521	175	TSF "AT4G20370" [Arabidopsis t	0.988	0.954	0.580	2.9e-48

UNIPROTKB|Q9XGS5 Fdr2 "Cen-like protein FDR2" [Oryza sativa (taxid:4530)]

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 139/169 (82%), Positives = 153/169 (90%)

Query:     2 LEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
             +EPL VG VIG+V+++F P +KM VTYN NK V NGHEL+PS VVSKPRVE+QGGD+RSF
Sbjct:     5 VEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGDLRSF 64

Query:    61 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
             FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FGRE++SYE P+PNIGIHRF+FVL
Sbjct:    65 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKPNIGIHRFIFVL 124

Query:   121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             FKQ RRQTV  PS RDHFNTR FA ENDLGLPVAAVYFNAQRETAARRR
Sbjct:   125 FKQKRRQTVIVPSFRDHFNTRRFAEENDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IGI

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IGI

UNIPROTKB|Q9XGS4 Fdr1 "Cen-like protein FDR1" [Oryza sativa (taxid:4530)]

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 140/169 (82%), Positives = 151/169 (89%)

Query:     2 LEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
             +EPL VG VIG+VI+SF P  KM VTYN NK V NGHE +PS VVSKPRVE+QGGDMRSF
Sbjct:     5 VEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGDMRSF 64

Query:    61 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
             FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FGRE++SYE P+P+IGIHRFVFVL
Sbjct:    65 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHRFVFVL 124

Query:   121 FKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             FKQ RRQ V  PSSRDHFNTR FA EN+LGLPVAAVYFNAQRETAARRR
Sbjct:   125 FKQKRRQAVVVPSSRDHFNTRQFAEENELGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

UNIPROTKB|Q6ESF8 P0605D08.14 "Os02g0531600 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 134/170 (78%), Positives = 151/170 (88%)

Query:     1 MLEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRS 59
             +LEPL VG VIG+V+++F P++KM+ TY  NKQV NGHE FPS V  KPRVE+QGGD+RS
Sbjct:     4 VLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGDLRS 63

Query:    60 FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFV 119
             FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FGRE+VSYE PRPNIGIHRF+ V
Sbjct:    64 FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRPNIGIHRFILV 123

Query:   120 LFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             LF+Q RRQ V+PP SRD F+TR FA +NDLGLPVAAVYFNAQRETAARRR
Sbjct:   124 LFRQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2150595 TFL1 "TERMINAL FLOWER 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 128/170 (75%), Positives = 152/170 (89%)

Query:     1 MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
             ++EPL +G V+GDV++ FTP+ KM+V+YN KQV NGHELFPS+V SKPRVEI GGD+RSF
Sbjct:     8 VIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSF 67

Query:    61 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
             FTLVM DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFG+E+VSYE+PRP+IGIHRFVFVL
Sbjct:    68 FTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVL 127

Query:   121 FKQTRRQTVNPP-SSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             F+Q +R+ + P   SRDHFNTR FA E DLGLPVAAV+FNAQRETAAR+R
Sbjct:   128 FRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=IMP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=IMP

GO:0031982 "vesicle" evidence=IDA

GO:0090344 "negative regulation of cell aging" evidence=IMP

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2038643 ATC "centroradialis" [Arabidopsis thaliana (taxid:3702)]

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 128/169 (75%), Positives = 147/169 (86%)

Query:     3 EPLAVGGVIGDVIESFTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGDMRSFF 61
             +PL VG VIGDV+++   ++KM+VTYN+ KQV NGHELFPS V  KP+VE+ GGDMRSFF
Sbjct:     7 DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query:    62 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLF 121
             TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FG+E++ YE+PRPNIGIHRFV++LF
Sbjct:    67 TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query:   122 KQTRR-QTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             KQTRR   V+ PS RD FNTR FA ENDLGLPVAAV+FN QRETAARRR
Sbjct:   127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0005634 "nucleus" evidence=IDA

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

TAIR|locus:2174058 BFT "brother of FT and TFL1" [Arabidopsis thaliana (taxid:3702)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 113/170 (66%), Positives = 133/170 (78%)

Query:     2 LEPLAVGGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
             +EPL VG VIGDV+E F PS+ M VT+N N  V NGHEL PS ++SKPRVEI G D+RSF
Sbjct:     5 IEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSF 64

Query:    61 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
             FTL+M DPD P PS+PY+RE+LHW+VTDIPGTTDA+FGRE+V YE P+P  GIHR+VF L
Sbjct:    65 FTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFAL 124

Query:   121 FKQTRRQTVNP-PSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             FKQ  RQ V   P +R+ FNT AF++   L  PVAAVYFNAQRETA RRR
Sbjct:   125 FKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

GO:0005737 "cytoplasm" evidence=ISM

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009908 "flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

UNIPROTKB|Q93WI9 HD3A "Protein HEADING DATE 3A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 101/167 (60%), Positives = 124/167 (74%)

Query:     3 EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
             +PL VG V+GDV+++F  S  + VTY +K V NG EL PS V  +PRVE+ G DMR+F+T
Sbjct:     9 DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYT 68

Query:    63 LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
             LVM DPD P PSDP LRE+LHW+VTDIPGTT A+FG+E++ YE PRP +GIHR VFVLF+
Sbjct:    69 LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQ 128

Query:   123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             Q  RQTV  P  R +FNT+ FA   +LG PVAAVYFN QRE  +  R
Sbjct:   129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

GO:0048575 "short-day photoperiodism, flowering" evidence=IMP

UNIPROTKB|Q93WM7 Hd3a "Hd3a protein" [Oryza sativa Indica Group (taxid:39946)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 101/167 (60%), Positives = 124/167 (74%)

Query:     3 EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
             +PL VG V+GDV+++F  S  + VTY +K V NG EL PS V  +PRVE+ G DMR+F+T
Sbjct:     9 DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYT 68

Query:    63 LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
             LVM DPD P PSDP LRE+LHW+VTDIPGTT A+FG+E++ YE PRP +GIHR VFVLF+
Sbjct:    69 LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQ 128

Query:   123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             Q  RQTV  P  R +FNT+ FA   +LG PVAAVYFN QRE  +  R
Sbjct:   129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

TAIR|locus:2034168 FT "AT1G65480" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 98/167 (58%), Positives = 122/167 (73%)

Query:     3 EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
             +PL V  V+GDV++ F  SI + VTY  ++V NG +L PS V +KPRVEI G D+R+F+T
Sbjct:     7 DPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYT 66

Query:    63 LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
             LVM DPDVP PS+P+LRE+LHW+VTDIP TT  TFG E+V YE P P  GIHR VF+LF+
Sbjct:    67 LVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFR 126

Query:   123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             Q  RQTV  P  R +FNTR FA   +LGLPVAAV++N QRE+    R
Sbjct:   127 QLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048573 "photoperiodism, flowering" evidence=IEP;RCA

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2005521 TSF "AT4G20370" [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 97/167 (58%), Positives = 118/167 (70%)

Query:     3 EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
             +PL VG V+GDV++ FT  + + VTY +++V NG +L PS V++KP VEI G D R+F+T
Sbjct:     7 DPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYT 66

Query:    63 LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
             LVM DPDVP PS+P+ RE+LHW+VTDIP TT   FG E+V YE PRP  GIHR V VLF+
Sbjct:    67 LVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFR 126

Query:   123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
             Q  RQTV  P  R  FNTR FA   +LGLPVAA YFN QRE     R
Sbjct:   127 QLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGR 173

GO:0005575 "cellular_component" evidence=ND

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P93003	TFL1_ARATH	No assigned EC number	0.7529	1.0	0.9548	yes	no
Q9ZNV5	CEN_ARATH	No assigned EC number	0.7573	0.9881	0.9542	no	no
O82088	SELFP_SOLLC	No assigned EC number	0.7368	1.0	0.9657	N/A	no
Q9XH42	CET4_TOBAC	No assigned EC number	0.7485	1.0	0.9657	N/A	no
Q9XH43	CET2_TOBAC	No assigned EC number	0.7543	1.0	0.9657	N/A	no
Q9XH44	CET1_TOBAC	No assigned EC number	0.7117	1.0	0.9712	N/A	no
Q41261	CEN_ANTMA	No assigned EC number	0.7241	0.9881	0.9226	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: TFL1B SubName- Full=TFL1B protein (Putative uncharacterized protein) (Chromosome chr8 scaffold_23, whole genome shotgun sequence); (172 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	169
PLN00169	175	PLN00169, PLN00169, CETS family protein; Provision	7e-83
cd00866	154	cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin	4e-40
pfam01161	147	pfam01161, PBP, Phosphatidylethanolamine-binding p	2e-26
cd00457	159	cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr	2e-17
COG1881	174	COG1881, COG1881, Phospholipid-binding protein [Ge	3e-05
cd00865	150	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-	5e-04

>gnl|CDD|177765 PLN00169, PLN00169, CETS family protein; Provisional

 Score =  241 bits (617), Expect = 7e-83
 Identities = 105/169 (62%), Positives = 129/169 (76%), Gaps = 2/169 (1%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL VG V+GDV++ FT SI + VTY +++V NG EL PS VV++PRV+I G D+R+F+T
Sbjct: 7   DPLVVGRVVGDVLDPFTRSISLRVTYGSREVNNGCELKPSQVVNQPRVDIGGEDLRTFYT 66

Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPD P PS+P LRE+LHW+VTDIP TT ATFG+E+V YE PRP  GIHRFVFVLF+
Sbjct: 67  LVMVDPDAPSPSNPNLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFVFVLFR 126

Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAA--RRR 169
           Q  RQTV  P  R +FNTR FA   +LG PVAAVYFN QRE+ +  RR 
Sbjct: 127 QLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGSGGRRP 175

Length = 175

>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

 Score =  132 bits (334), Expect = 4e-40
 Identities = 59/153 (38%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 23  KMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGDMRS-FFTLVMTDPDVPGPSDPYLRE 80
            ++V+Y +   V  G+ L PS     P V     D     +TLVM DPD P   DP  RE
Sbjct: 2   DLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFRE 61

Query: 81  HLHWIVTDIPGTTDATF----GRELVSYE--IPRPNIGIHRFVFVLFKQTRRQTV----- 129
            LHW+VT+IPG+   T     G  LV Y    P    G HR+VF+LFKQ           
Sbjct: 62  WLHWLVTNIPGSDTTTGLVSKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKL 121

Query: 130 --NPPSSRDHFNTRAFAAENDLGLPVAAVYFNA 160
                  R  F+ R FA +N LGLPVAA +F  
Sbjct: 122 PPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV 154

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154

>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein

 Score = 97.6 bits (243), Expect = 2e-26
 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 20/150 (13%)

Query: 24  MSVTYNNKQVCNGHELFPSTVVSK-PRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHL 82
           + V Y    VC G+ L P    S  P +     D    + LVM DPD P  SDP   E L
Sbjct: 4   LPVEYTGAFVCPGNNLSPPLSWSDAPTIS----DGTKSYALVMVDPDAPSRSDPKGSEFL 59

Query: 83  HWIVTDIPGTTDAT----------FGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVN 130
           HW+VT+IP +              FG+ L  Y  P P    G HR+VF+L+    +  + 
Sbjct: 60  HWLVTNIPASVTELPGGGVQGVNDFGQTLAGYIGPCPPPGTGPHRYVFLLYALDEKLDLP 119

Query: 131 PPSSRDHFNTRAFAAENDLGLP-VAAVYFN 159
              +R     R     + LG   +A  +F 
Sbjct: 120 AGVTRAEL--REAFKGHVLGPATLAGNFFR 147

Length = 147

>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain

 Score = 74.4 bits (183), Expect = 2e-17
 Identities = 34/155 (21%), Positives = 43/155 (27%), Gaps = 36/155 (23%)

Query: 36  GHELFPSTVV----SKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIP 90
           G  L P          P +   G       + LVM DPD P       R  +H +V  IP
Sbjct: 11  GSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAP-----LGRPIVHGLVYGIP 65

Query: 91  GTT----------------------DATFGRELVSYEIPRPNI--GIHRFVFVLFKQTRR 126
                                         R    Y  PRP +  G HR+ F ++     
Sbjct: 66  ANKTSLSNDDFVVTDNGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEP 125

Query: 127 QTVNPPSS-RDHFNTRAFAAENDLGLPVAAVYFNA 160
              +     R  F    FA  N LG  V       
Sbjct: 126 LDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQF 159

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer). Length = 159

>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only]

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 11/96 (11%)

Query: 1  MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           L           V+   + +        ++  C G  + P    S      +       
Sbjct: 9  ALAASMAIFAELAVMGLISNAFADGAPIPDEYTCGGPNISPPLSWSGVPEGTKS------ 62

Query: 61 FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAT 96
          F L + DPD P          +HW+V +IP      
Sbjct: 63 FALTVDDPDAPTGG-----GWVHWVVANIPADVTEL 93

Length = 174

>gnl|CDD|176643 cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 27/81 (33%)

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT--------------DATFGRELVSYEI 106
             L++ DPD P           HW+V +IP  T               A  GR    +  
Sbjct: 42  LALIVEDPDAPTGGGFV-----HWVVWNIPADTTELPEGASRGALPAGAVQGR--NDFGE 94

Query: 107 PR------PNIGIHRFVFVLF 121
                   P+ G HR+VF ++
Sbjct: 95  AGYGGPCPPDGGPHRYVFTVY 115

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
PLN00169	175	CETS family protein; Provisional	100.0
KOG3346	185	consensus Phosphatidylethanolamine binding protein	100.0
cd00866	154	PEBP_euk PhosphatidylEthanolamine-Binding Protein	100.0
PF01161	146	PBP: Phosphatidylethanolamine-binding protein; Int	99.96
cd00457	159	PEBP PhosphatidylEthanolamine-Binding Protein (PEB	99.92
cd00865	150	PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr	99.72
PRK10257	158	putative kinase inhibitor protein; Provisional	99.71
PRK09818	183	putative kinase inhibitor; Provisional	99.69
TIGR00481	141	Raf kinase inhibitor-like protein, YbhB/YbcL famil	99.65
COG1881	174	Phospholipid-binding protein [General function pre	99.62

>PLN00169 CETS family protein; Provisional

Probab=100.00  E-value=1.9e-53  Score=327.30  Aligned_cols=168  Identities=62%  Similarity=1.033  Sum_probs=157.3

Q ss_pred             CCCcccCCcccccCCCCCCCeeEEEEECCeeecCCcccCcccccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeE
Q 035977            2 LEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREH   81 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~f~P~~~L~V~y~~~~v~~G~~l~~~~t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~   81 (169)
                      +++|++++||||||+.|.|+..|+|+|++..|.+|+.|++++++.+|+|+|.+.+.+++|||+|+|||+|++.+++.++|
T Consensus         6 ~~~l~~~~iipdvid~f~P~~~L~V~y~s~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~ytlim~DpDaP~~~~~~~~~~   85 (175)
T PLN00169          6 RDPLVVGRVVGDVLDPFTRSISLRVTYGSREVNNGCELKPSQVVNQPRVDIGGEDLRTFYTLVMVDPDAPSPSNPNLREY   85 (175)
T ss_pred             ccchhhCCcCCcccCCcCCceEEEEEECCcCcCCcCCCCHHHhccCCEEEEccCCCCceeEEEEECCCCCCCCCCCcccE
Confidence            68999999999999999999999999999999999999999999999999987766899999999999999999999999


Q ss_pred             EEEEEecCCCCcCCCCCceeeccCCCCCCCCCceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcCCCCceEEEEEEEe
Q 035977           82 LHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQ  161 (169)
Q Consensus        82 lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~~~f~~~  161 (169)
                      +||++.||+++.....|+++++|+||.|++|.|||+|+||+|++.+.+..+..|.+||+++|+++++|+.|||||||++|
T Consensus        86 ~HW~v~nip~~~~~~~g~~~~~Y~~P~Pp~G~HRYvflly~Q~~~~~~~~~~~R~~F~~~~Fa~~~~L~~PvA~nfF~a~  165 (175)
T PLN00169         86 LHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQ  165 (175)
T ss_pred             EEEEEeCCccccccccCccceeecCCCCCCCceeEEEEEEEcCCCcccCCcccCCCcCHHHHHHHhCCCCceEEEEEEEe
Confidence            99999999987555678999999999999999999999999998876556678999999999999999999999999999


Q ss_pred             eCCCCCCC
Q 035977          162 RETAARRR  169 (169)
Q Consensus       162 ~d~~~~~~  169 (169)
                      |++.-++|
T Consensus       166 ~~~~~~~~  173 (175)
T PLN00169        166 RESGSGGR  173 (175)
T ss_pred             cCCcCCcc
Confidence            99977665

>KOG3346 consensus Phosphatidylethanolamine binding protein [General function prediction only]

Probab=100.00  E-value=7.8e-52  Score=318.51  Aligned_cols=168  Identities=46%  Similarity=0.793  Sum_probs=157.3

Q ss_pred             CCCcccCCcccccCCCCCCCeeEEEEECC-eeecCCcccCcccccCCCeEEEecC-CCCceEEEEEeCCCCCCCCCCCCC
Q 035977            2 LEPLAVGGVIGDVIESFTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGG-DMRSFFTLVMTDPDVPGPSDPYLR   79 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~f~P~~~L~V~y~~-~~v~~G~~l~~~~t~~~P~i~~~~~-~~~~~ytlimvDpD~p~~~~~~~~   79 (169)
                      ++.+.+++||+|+|+.+.|.+.|+|+|++ ..|++|+.|++++++..|.|+|.+. +++++|||||+|||+|++++++++
T Consensus         5 ~~~~~~~~iv~Dvl~~~~p~~~l~V~y~~~~~v~~G~~l~pt~~~~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~~p~~r   84 (185)
T KOG3346|consen    5 RDPLNKHRIVPDVLDDFEPSVKLNVTYNSDIVVENGNELTPTQVKNRPIVSWDGFADPGSLYTLVMTDPDAPSRSDPKFR   84 (185)
T ss_pred             hhhhhccCcchhhhccCCCceEEEEEeCCCeeecCCCEeCchhhccCCeEEEcCcCCCCCeEEEEEeCCCCCCCCCCcce
Confidence            46789999999999999999999999996 9999999999999999999999974 778999999999999999999999


Q ss_pred             eEEEEEEecCCCCcCCCCCceeeccCCCCC--CCCCceEEEEEeeeCCCCCCC--CCCCCCCccHHHHHHHcCCCCceEE
Q 035977           80 EHLHWIVTDIPGTTDATFGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVN--PPSSRDHFNTRAFAAENDLGLPVAA  155 (169)
Q Consensus        80 ~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~--~~~~R~~F~~~~F~~~~~L~~pva~  155 (169)
                      +|||||++|||++.++++|.++++|+||.|  ++|.|||+|+||+|+....+.  .+..|++|++++|+++++|++|||+
T Consensus        85 E~lHWlV~nIPg~~~~~~G~~i~~Y~~P~Pp~~tG~HRyVfll~rQ~~~~~~~~~~~~~R~~F~~~~F~~~~~lg~PvA~  164 (185)
T KOG3346|consen   85 EWLHWLVTNIPGTDGISKGQEISEYLGPGPPKGTGLHRYVFLLYRQPGRLDSDEPSPLSRGNFNTRKFAKKYELGTPVAG  164 (185)
T ss_pred             eEEEEEEEeecCCccccCCeEeeeeeCCCCCCCCCceEEEEEEEEcCCccccccCCCCcccceeHHHHHHHhccCCchhh
Confidence            999999999999976899999999999999  699999999999999987653  3689999999999999999999999


Q ss_pred             EEEEEeeCCCCCCC
Q 035977          156 VYFNAQRETAARRR  169 (169)
Q Consensus       156 ~~f~~~~d~~~~~~  169 (169)
                      +||+++||+..++|
T Consensus       165 ~~f~aq~d~~~~~~  178 (185)
T KOG3346|consen  165 NFFQAQWDDYVPKL  178 (185)
T ss_pred             heehhhcchhhHHH
Confidence            99999999987653

>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

Probab=100.00  E-value=4.3e-39  Score=242.89  Aligned_cols=138  Identities=43%  Similarity=0.739  Sum_probs=126.1

Q ss_pred             eEEEEECC-eeecCCcccCcccccCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC----CC
Q 035977           23 KMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD----AT   96 (169)
Q Consensus        23 ~L~V~y~~-~~v~~G~~l~~~~t~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~----~~   96 (169)
                      .|.|+|++ ..|.+|+.|++++++.+|+|+|.... .+++|+|||+|+|+|.+.++..+++||||++||+++..    ..
T Consensus         2 ~l~v~y~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~~y~lvm~DpD~p~~~~~~~~~~lHwl~~ni~~~~~~~~~~~   81 (154)
T cd00866           2 DLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGSDTTTGLVS   81 (154)
T ss_pred             eEEEEECCCcCcCCCCCCCHHHhCcCCeEEEecCCCCCCeEEEEEECCCCCCCCCCCCCCEEEEEEeCcCCccccccccC
Confidence            68999998 99999999999999999999999875 68999999999999999988999999999999998742    45


Q ss_pred             CCceeeccCCCCC--CCCCceEEEEEeeeCCCCCCCC-------CCCCCCccHHHHHHHcCCCCceEEEEEEE
Q 035977           97 FGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVNP-------PSSRDHFNTRAFAAENDLGLPVAAVYFNA  160 (169)
Q Consensus        97 ~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~~-------~~~R~~F~~~~F~~~~~L~~pva~~~f~~  160 (169)
                      .|..+++|+||+|  |+|.|||+|+||+|+..+.+..       ...|.+||+++|++++||+.|||+|||++
T Consensus        82 ~~~~~~~Y~~P~Pp~g~g~HRY~fll~~q~~~~~~~~~~~~~~~~~~r~~F~~~~F~~~~~L~~pva~~~f~~  154 (154)
T cd00866          82 KGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKLPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV  154 (154)
T ss_pred             CCCCcceeeCCCCCCCCCCccEEEEEEEeCCccCccccccccCCccccCCcCHHHHHHHhCCCCcEEEEEEeC
Confidence            6789999999999  6789999999999999887642       47899999999999999999999999985

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer).

>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals

Probab=99.96  E-value=1.8e-29  Score=188.74  Aligned_cols=129  Identities=33%  Similarity=0.640  Sum_probs=106.5

Q ss_pred             eeEEEEE-CCeeecCCcccCccc-ccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCC---------
Q 035977           22 IKMSVTY-NNKQVCNGHELFPST-VVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIP---------   90 (169)
Q Consensus        22 ~~L~V~y-~~~~v~~G~~l~~~~-t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~---------   90 (169)
                      ..|.|+| ++..+.+|+.+++.. ++..|+       .+++|+|+|+|+|+|.+.+++.++++|||++||+         
T Consensus         2 ~~L~v~f~~~~~~~~G~~~sp~~~~~~~P~-------~~~~y~lim~D~D~P~~~~~~~~~~~Hwl~~ni~~~~~~~~~~   74 (146)
T PF01161_consen    2 GKLPVKFTGNKSVCPGNNVSPPLSWQNAPT-------GTKSYTLIMVDPDAPSRENPSFGPFLHWLVTNIPSTELPEGSD   74 (146)
T ss_dssp             CEEEEEECTTEECSTTEEEEGGGECSS-TC-------TTSEEEEEEEETTSSBTTSCTTTSEEEEEEEEEETSEE-TTSS
T ss_pred             cCcCceeEcccccCCCCCCCcCcccccCCC-------CCcEEEEEEECCCCCccccCCCCcEEEEEEcCCCCccCCCCCC
Confidence            4799999 689999999999999 888888       4779999999999999888889999999999999         


Q ss_pred             CC-cCC-CCCceeeccCCCCC--CCCCceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcCCCCc-eEEEEEE
Q 035977           91 GT-TDA-TFGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLP-VAAVYFN  159 (169)
Q Consensus        91 ~~-~~~-~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~p-va~~~f~  159 (169)
                      .- ... +.|..+++|.||+|  ++|.|||+|+||+|+..+.+  ......+++++.+++++|+.+ ++++||+
T Consensus        75 ~~~~~~~~~g~~~~~Y~~P~Pp~g~g~HrY~f~ly~q~~~~~l--~~~~~~~~~~~~~~~~~L~~~~l~~~y~r  146 (146)
T PF01161_consen   75 GARQGINSSGQVIAPYLGPCPPKGSGPHRYVFLLYAQPSPLPL--SDGATKFDLREAFKGHGLGPASLAGNYFR  146 (146)
T ss_dssp             TCETSBGGTSEEEES--SB-SSTTSSCEEEEEEEEEESSSSTS--GBSSTHHTHHHHHHHTTEESEESEEEEEE
T ss_pred             ccEecccccCccccEEcCCcCcCcCCCceEEEEEEEcCCCCCC--CCCCCHHHHHHHHHcCCCCCceEEEEEEC
Confidence            10 011 23667899999999  57899999999999997654  355566889999999999987 8999996

The various functions described for members of this family include lipid binding, neuronal development [], serine protease inhibition [], the control of the morphological switch between shoot growth and flower structures [], and the regulation of several signalling pathways such as the MAP kinase pathway [], and the NF-kappaB pathway []. The control of the latter two pathways involves the PEBP protein RKIP, which interacts with MEK and Raf-1 to inhibit the MAP kinase pathway, and with TAK1, NIK, IKKalpha and IKKbeta to inhibit the NF-kappaB pathway. Other PEBP-like proteins that show strong structural homology to PEBP include Escherichia coli YBHB and YBCL, the Rattus norvegicus (Rat) neuropeptide HCNP, and Antirrhinum majus (Garden snapdragon) protein centroradialis (CEN). Structures have been determined for several members of the PEBP-like family, all of which show extensive fold conservation. The structure consists of a large central beta-sheet flanked by a smaller beta-sheet on one side, and an alpha helix on the other. Sequence alignments show two conserved central regions, CR1 and CR2, that form a consensus signature for the PEBP family. These two regions form part of the ligand-binding site, which can accommodate various anionic groups. The N- and C-terminal regions are the least conserved, and may be involved in interactions with different protein partners. The N-terminal residues 2-12 form the natural cleavage peptide HCNP involved in neuronal development. The C-terminal region is deleted in plant and bacterial PEBP homologues, and may help control accessibility to the active site. ; PDB: 1BD9_A 1BEH_A 2QYQ_A 2L7W_A 3AXY_A 2IQX_C 2IQY_A 1KN3_A 1FUX_A 1B7A_A ....

>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain

Probab=99.92  E-value=1.4e-24  Score=165.08  Aligned_cols=122  Identities=30%  Similarity=0.374  Sum_probs=98.0

Q ss_pred             eecC-CcccCc----ccccCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcCC----------
Q 035977           32 QVCN-GHELFP----STVVSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA----------   95 (169)
Q Consensus        32 ~v~~-G~~l~~----~~t~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~~----------   95 (169)
                      .|.. |+.|+.    ......|.|+|++.+ .+++|+|+|+|+|+|.     ..+|+||+++||+.+...          
T Consensus         6 ~~~~~g~~lp~~~~~~g~~~sP~l~w~~~p~~t~s~ali~~DpDap~-----~~~~~HWvv~nIp~~~~~~~~~~~~~~~   80 (159)
T cd00457           6 EVGPSGSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAPL-----GRPIVHGLVYGIPANKTSLSNDDFVVTD   80 (159)
T ss_pred             CcCCCCCccChhhccCCCCcCCceEecCCCCCCeEEEEEEECCCCCC-----CCCceEEEEeccCcccccccccccccCC
Confidence            4555 777777    667778999999875 5789999999999984     258999999999976411          


Q ss_pred             --CCCc----------eeeccCCCCC--CCCCceEEEEEeeeCCCCCCCC-CCCCCCccHHHHHHHcCCCCceEEEEEE
Q 035977           96 --TFGR----------ELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVNP-PSSRDHFNTRAFAAENDLGLPVAAVYFN  159 (169)
Q Consensus        96 --~~g~----------~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~~-~~~R~~F~~~~F~~~~~L~~pva~~~f~  159 (169)
                        ..+.          ....|.||+|  |+|.|||+|+||+|+..+.... ...|..|++.+|++.+.|+ ++|.++++
T Consensus        81 ~~~~~~~~~n~~g~~~~~~~Y~GP~PP~G~g~HrY~f~lyald~~~~~~~~~~~~~~~~~~~~~~~~vL~-~~a~~~~~  158 (159)
T cd00457          81 NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQ  158 (159)
T ss_pred             CCccceeccccccccCCCcCCcCCCCCCCCCCeeEEEEEEEecCccccccccCCCCHHHHHHHHHhCeee-EEEEEEEE
Confidence              1111          2349999999  5679999999999998876532 4789999999999999997 68998876

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer).

>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

Probab=99.72  E-value=6.2e-17  Score=121.89  Aligned_cols=94  Identities=23%  Similarity=0.362  Sum_probs=73.4

Q ss_pred             cCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc-CCCCC----------------ceeeccCC
Q 035977           45 VSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DATFG----------------RELVSYEI  106 (169)
Q Consensus        45 ~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g----------------~~~~~Y~~  106 (169)
                      ...|.|+|++.+ ..++|+|+|+|+|+|.     ..+++||+++||++.. .+..|                .....|.|
T Consensus        25 ~~SP~l~w~~~p~~t~s~al~m~D~Dap~-----~~~~~HW~~~nIp~~~~~i~~g~~~~~~~~~~~~g~n~~~~~~Y~g   99 (150)
T cd00865          25 NVSPPLSWSGVPAGTKSLALIVEDPDAPT-----GGGFVHWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGEAGYGG   99 (150)
T ss_pred             CcCCCeEEcCCCCCCeEEEEEEEcCCCCC-----CCCEEEEEEeccCcccccccCCcccccCCCCCeEeecCCCCCeecC
Confidence            468999999875 5799999999999983     2589999999999862 11111                24689999


Q ss_pred             CCCCC-CCceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcC
Q 035977          107 PRPNI-GIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAEND  148 (169)
Q Consensus       107 P~P~~-g~HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~  148 (169)
                      |+|+. +.|||+|.||+++..+.+     ...+...++++...
T Consensus       100 P~Pp~~~~HrY~f~vyAld~~l~~-----~~~~~~~~l~~ai~  137 (150)
T cd00865         100 PCPPDGGPHRYVFTVYALDVPLLL-----PPGATRAELLFAMK  137 (150)
T ss_pred             CCCcCCCceEEEEEEEEeCCccCC-----CCCCCHHHHHHHHh
Confidence            99954 899999999999988765     35677777766654

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.

>PRK10257 putative kinase inhibitor protein; Provisional

Probab=99.71  E-value=7.5e-17  Score=122.34  Aligned_cols=80  Identities=25%  Similarity=0.443  Sum_probs=62.3

Q ss_pred             CCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC-----CC-------CCc-------eeeccC
Q 035977           46 SKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-----AT-------FGR-------ELVSYE  105 (169)
Q Consensus        46 ~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-----~~-------~g~-------~~~~Y~  105 (169)
                      .+|.|+|++.. ..++|+|+|.|||+|..     ..|+||++.|||++..     ..       .|.       ....|.
T Consensus        30 ~SP~L~w~~~P~~t~s~ali~~DpDap~~-----~~~~HWvv~nIP~~~~~l~eg~~~~~~~~p~g~~~g~n~~g~~gY~  104 (158)
T PRK10257         30 ISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVALPDGVLQTRTDFGKAGYG  104 (158)
T ss_pred             CCceEEEcCCCCCceEEEEEEECCCCCCC-----CcEEEEEEEcCCCCcccccCCCCcccccCCCCceeccccCCCccCc
Confidence            48999999865 36999999999999864     3699999999997531     11       011       246899


Q ss_pred             CCCCCCC-CceEEEEEeeeC-CCCCCC
Q 035977          106 IPRPNIG-IHRFVFVLFKQT-RRQTVN  130 (169)
Q Consensus       106 ~P~P~~g-~HRY~flL~~q~-~~~~~~  130 (169)
                      ||+|+.| .|||+|.||+++ ..+.+.
T Consensus       105 GP~PP~g~~HrY~f~vyALd~~~L~l~  131 (158)
T PRK10257        105 GAAPPKGETHRYIFTVHALDVERIDVD  131 (158)
T ss_pred             CCCCccCCCceEEEEEEEecCcccCCC
Confidence            9999655 799999999999 457663

>PRK09818 putative kinase inhibitor; Provisional

Probab=99.69  E-value=2.2e-16  Score=122.35  Aligned_cols=100  Identities=25%  Similarity=0.437  Sum_probs=74.2

Q ss_pred             EEEEECCeeecCCcccCcccc---------cCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc
Q 035977           24 MSVTYNNKQVCNGHELFPSTV---------VSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT   93 (169)
Q Consensus        24 L~V~y~~~~v~~G~~l~~~~t---------~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~   93 (169)
                      |.|+  +..+..|..|+...+         ...|.|+|++.+ ..++|+|+|.|||+|..     ..|+||+++|||++.
T Consensus        22 ~~lt--S~~f~~G~~ip~~~~~~~~~~~G~n~SP~L~W~~~P~gtks~aLi~~DpDaP~g-----~~~~HWvv~nIP~~~   94 (183)
T PRK09818         22 FQVT--SNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTG-----SGWWHWTVANIPATV   94 (183)
T ss_pred             EEEE--CcCccCcCCCCHHHcccccCCCCCCcceeEEEccCCCCcEEEEEEEECCCCCCC-----CcEEEEEEEcCCCCc
Confidence            5555  556678888876542         258999999864 36899999999999864     369999999999752


Q ss_pred             C-----C--------CCC-------ceeeccCCCCC--CCCCceEEEEEeeeC-CCCCCC
Q 035977           94 D-----A--------TFG-------RELVSYEIPRP--NIGIHRFVFVLFKQT-RRQTVN  130 (169)
Q Consensus        94 ~-----~--------~~g-------~~~~~Y~~P~P--~~g~HRY~flL~~q~-~~~~~~  130 (169)
                      .     .        ..|       -....|.||+|  |.|.|||+|.||+.+ ..+.+.
T Consensus        95 ~~l~eg~~~~~~~~~~~g~~~g~N~~g~~gY~GP~PP~G~g~HrY~F~vyALd~~~l~l~  154 (183)
T PRK09818         95 TYLPADAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVD  154 (183)
T ss_pred             cccCCCCcccccccCCCCCEEeecCCCCCceECCCCccCCCCEEEEEEEEEecCcccCCC
Confidence            1     0        011       12468999999  567899999999998 446553

>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family

Probab=99.65  E-value=2e-15  Score=112.70  Aligned_cols=94  Identities=24%  Similarity=0.438  Sum_probs=71.1

Q ss_pred             cCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc-----CCC-------CC--------ceeec
Q 035977           45 VSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT-----DAT-------FG--------RELVS  103 (169)
Q Consensus        45 ~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~-----~~~-------~g--------~~~~~  103 (169)
                      ...|.|+|++.. ..++|+|+|.|+|+|...     .|+||+++|||++.     +..       .|        .....
T Consensus        13 n~SP~l~w~~~P~~t~s~al~~~D~Dap~~~-----~~~HWv~~nIp~~~~~l~e~~~~~~~~~~~g~~~~g~n~~g~~~   87 (141)
T TIGR00481        13 NISPPLSWDGVPEGAKSLALTCIDPDAPTGC-----GWWHWVVVNIPADTTVLPENASSDDKRLPQGVPLQGRNDFGKSG   87 (141)
T ss_pred             CCCcEEEEcCCCCCceEEEEEEECCCCCCCC-----CeEEEEEecCCCCcccccCCccccccccCCcceeEeeccCCCcc
Confidence            348999999864 468999999999998753     49999999999742     111       11        12479


Q ss_pred             cCCCCCCCCCceEEEEEeeeCCC-CCCCCCCCCCCccHHHHHHHcC
Q 035977          104 YEIPRPNIGIHRFVFVLFKQTRR-QTVNPPSSRDHFNTRAFAAEND  148 (169)
Q Consensus       104 Y~~P~P~~g~HRY~flL~~q~~~-~~~~~~~~R~~F~~~~F~~~~~  148 (169)
                      |.||+|+.|.|||+|.||+++.. +.+.     ..+...++.++..
T Consensus        88 Y~GP~PP~g~HrY~f~vyALd~~~l~l~-----~~~~~~~l~~ai~  128 (141)
T TIGR00481        88 YIGPCPPKGDHRYLFTVYALDTEKLDLD-----PGFSLADLGDAME  128 (141)
T ss_pred             EeCCCCcCCCEEEEEEEEEecCCCCCCC-----CCCCHHHHHHHHh
Confidence            99999977779999999999976 6653     2566677766644

>COG1881 Phospholipid-binding protein [General function prediction only]

Probab=99.62  E-value=2.4e-15  Score=115.59  Aligned_cols=115  Identities=20%  Similarity=0.334  Sum_probs=79.1

Q ss_pred             CeeecCCcccCcccc----cCCCeEEEecC-CCCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc-----C-CC--
Q 035977           30 NKQVCNGHELFPSTV----VSKPRVEIQGG-DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT-----D-AT--   96 (169)
Q Consensus        30 ~~~v~~G~~l~~~~t----~~~P~i~~~~~-~~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~-----~-~~--   96 (169)
                      +..+..|+.++...+    ...|.++|++. ..+++|+|+|.|||||+.     ..|+||++.||+...     + ..  
T Consensus        27 s~~f~~g~~ip~~~t~~g~~~sPpl~ws~~P~~tkS~AL~v~DpDAP~g-----~~~~HWvv~nIp~~~~~~~~~~~~~~  101 (174)
T COG1881          27 SNAFADGAPIPDEYTCGGPNISPPLSWSGVPEGTKSFALTVDDPDAPTG-----GGWVHWVVANIPADVTELPEGSGPKS  101 (174)
T ss_pred             chhhhCCCccchhhhcCCCCcCCceeecCCCCCCeeEEEEEECCCCCCC-----CcEEEEEEEccCCccccccccccccc
Confidence            456677777776553    56899999986 447899999999999973     589999999999731     0 00  


Q ss_pred             -----C---CceeeccCCCCCCCCC-ceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcCCC
Q 035977           97 -----F---GRELVSYEIPRPNIGI-HRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLG  150 (169)
Q Consensus        97 -----~---g~~~~~Y~~P~P~~g~-HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~L~  150 (169)
                           +   +-.-..|.||+|+.|. |||.|.||+++-.+... +.....=.+.+-++.|-|+
T Consensus       102 ~~~~~qg~Nd~g~~~Y~Gp~PP~g~~HrY~f~vyALd~~~~~~-~~g~~~~~~~~~~~~hil~  163 (174)
T COG1881         102 KIGIVQGINDFGSRGYGGPCPPKGHGHRYYFTVYALDVELLLL-PAGASGAELGKAMEGHILA  163 (174)
T ss_pred             ccceEEeeccccccCcccCCCCCCCCeEEEEEEEEcccccccC-CCCCCHHHHHHHHHHHHHH
Confidence                 0   1233559999996666 99999999998754321 1222222334445555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	169
1wko_A	180	Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana		3e-74
1qou_A	181	Cen (Centroradialis) Protein From Antirrhinum Lengt		7e-71
3axy_A	170	Structure Of Florigen Activation Complex Consisting		3e-56
1wkp_A	171	Flowering Locus T (Ft) From Arabidopsis Thaliana Le		2e-53
2jyz_A	179	Cg7054 Solution Structure Length = 179		3e-21
2iqy_A	190	Rat Phosphatidylethanolamine-Binding Protein Length		5e-13
1kn3_A	183	Murine Pebp-2 (Phosphatidylethanolamine-Binding Pro		6e-13
2iqx_A	187	Rat Phosphatidylethanolamine-Binding Protein Contai		1e-12
1bd9_A	187	Human Phosphatidylethanolamine Binding Protein Leng		3e-12
1b7a_A	186	Structure Of The Phosphatidylethanolamine-Binding P		1e-11
1a44_A	185	Phosphatidylethanolamine Binding Protein From Calf		1e-11
1wpx_B	220	Crystal Structure Of Carboxypeptidase Y Inhibitor C		2e-07

>pdb|1WKO|A Chain A, Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana Length = 180

Iteration: 1
 Score =  273 bits (699), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 128/170 (75%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           ++EPL +G V+GDV++ FTP+ KM+V+YN KQV NGHELFPS+V SKPRVEI GGD+RSF
Sbjct: 11  VIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSF 70
Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVM DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFG+E+VSYE+PRP+IGIHRFVFVL
Sbjct: 71  FTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVL 130
Query: 121 FKQTRRQTVNPP-SSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F+Q +R+ + P   SRDHFNTR FA E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 131 FRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>pdb|1QOU|A Chain A, Cen (Centroradialis) Protein From Antirrhinum Length = 181

Iteration: 1
 Score =  262 bits (669), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 126/174 (72%), Positives = 146/174 (83%), Gaps = 7/174 (4%)
Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNN----KQVCNGHELFPSTVVSKPRVEIQGGDMR 58
           +PL +G VIGDV++ FT ++KMSV YN+    K V NGHELFPS V S PRVE+ GGDMR
Sbjct: 8   DPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMR 67
Query: 59  SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVF 118
           SFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FG+E+VSYE+PRPNIGIHRFVF
Sbjct: 68  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVF 127
Query: 119 VLFKQTRR--QTVNPP-SSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           +LFKQ +R    ++PP   RD FNTR F  EN+LGLPVAAV+FN QRETAARRR
Sbjct: 128 LLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

>pdb|3AXY|A Chain A, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 170

Iteration: 1
 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 101/161 (62%), Positives = 124/161 (77%)
Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL VG V+GDV+++F  S  + VTY +K V NG EL PS V  +PRVE+ G DMR+F+T
Sbjct: 9   DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTFYT 68
Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPD P PSDP LRE+LHW+VTDIPGTT A+FG+E++SYE PRP +GIHR VFVLF+
Sbjct: 69  LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQ 128
Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
           Q  RQTV  P  R +FNT+ FA   +LG PVAAVYFN+QRE
Sbjct: 129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>pdb|1WKP|A Chain A, Flowering Locus T (Ft) From Arabidopsis Thaliana Length = 171

Iteration: 1
 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/162 (60%), Positives = 122/162 (75%)
Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL V  V+GDV++ F  SI + VTY  ++V NG  L PS V +KPRVEI G D+R+F+T
Sbjct: 10  DPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLNLRPSQVQNKPRVEIGGEDLRNFYT 69
Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPDVP PS+P+LRE+LHW+VTDIP TT  TFG E+VSYE P P  GIHR VF+LF+
Sbjct: 70  LVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVSYENPSPTAGIHRVVFILFR 129
Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRET 164
           Q  RQTV  P  R +FNTR FA   +LGLPVAAV++N+QRE+
Sbjct: 130 QLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNSQRES 171

>pdb|2JYZ|A Chain A, Cg7054 Solution Structure Length = 179

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 10  VIGDVIESFTPSIKMSVTYNNK-QVCNGHELFPSTVVSKPRVEIQGGDMRS-FFTLVMTD 67
           ++ DV+++  P+  + V Y +  +V  G+EL P+ V  +P V   G + +S   TL+M D
Sbjct: 4   IVPDVLDAV-PAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVD 62
Query: 68  PDVPGPSDPYLREHLHWIVTDIPGTTDA-TFGRELVSY--EIPRPNIGIHRFVFVLFKQT 124
           PD P   DP  RE LHW V +IPG+ +  + G  L  Y    P  + G+HR++F+L++Q 
Sbjct: 63  PDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQE 122
Query: 125 RRQTVNPPSS------RDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
            +    P  S      R +FN R FAA++ LG P+AA Y+ AQ +
Sbjct: 123 NKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>pdb|2IQY|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Length = 190

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 36  GHELFPSTVVSKPR-VEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 94
           G  L P+ V+++P  +   G D    +TLV+TDPD P   DP  RE  H++V ++ G  D
Sbjct: 41  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 99
Query: 95  ATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP-------SSRDHFNTRAFAA 145
            + G  L  Y    P  + G+HR+V+++++Q +    + P        +R  F   +F  
Sbjct: 100 ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRK 159
Query: 146 ENDLGLPVAAVYFNAQRETA 165
           +  LG PVA   F A+ + +
Sbjct: 160 KYHLGAPVAGTCFQAEWDDS 179

>pdb|1KN3|A Chain A, Murine Pebp-2 (Phosphatidylethanolamine-Binding Protein-2) Length = 183

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 20  PSIKMSVTYNNKQVCN-GHELFPSTVVSKP-RVEIQGGDMRSFFTLVMTDPDVPGPSDPY 77
           P   + VTY   +V   G  L P+ V  +P  +   G D    +TL++TDPD P    P 
Sbjct: 17  PQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPV 76
Query: 78  LREHLHWIVTDIPGTTDATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP--- 132
            RE  H++V ++ G  D + G  L  Y    P    G+HR+V+++++Q +    + P   
Sbjct: 77  YREWHHFLVVNMKG-NDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILT 135
Query: 133 -SSRDH---FNTRAFAAENDLGLPVAAVYFNAQRET 164
             S DH   F T AF  +  LG PVA   + A+ ++
Sbjct: 136 NRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDS 171

>pdb|2IQX|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Containing The S153e Mutation In The Complex With O-Phosphorylethanolamine Length = 187

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 36  GHELFPSTVVSKPR-VEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 94
           G  L P+ V+++P  +   G D    +TLV+TDPD P   DP  RE  H++V ++ G  D
Sbjct: 38  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 96
Query: 95  ATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP-------SSRDHFNTRAFAA 145
            + G  L  Y    P  + G+HR+V+++++Q +    + P        +R  F    F  
Sbjct: 97  ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRK 156
Query: 146 ENDLGLPVAAVYFNAQRETA 165
           +  LG PVA   F A+ + +
Sbjct: 157 KYHLGAPVAGTCFQAEWDDS 176

>pdb|1BD9|A Chain A, Human Phosphatidylethanolamine Binding Protein Length = 187

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 20  PSIKMSVTYNNKQVCN-GHELFPSTVVSKP-RVEIQGGDMRSFFTLVMTDPDVPGPSDPY 77
           P   + VTY    V   G  L P+ V ++P  +   G D    +TLV+TDPD P   DP 
Sbjct: 21  PQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSRKDPK 80
Query: 78  LREHLHWIVTDIPGTTDATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP--- 132
            RE  H++V ++ G  D + G  L  Y    P    G+HR+V+++++Q R    + P   
Sbjct: 81  YREWHHFLVVNMKG-NDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILS 139
Query: 133 -SSRDH---FNTRAFAAENDLGLPVAAVYFNAQRE 163
             S DH   F   +F  + +L  PVA   + A+ +
Sbjct: 140 NRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWD 174

>pdb|1B7A|A Chain A, Structure Of The Phosphatidylethanolamine-Binding Protein From Bovine Brain Length = 186

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 20  PSIKMSVTYNNKQVCN-GHELFPSTVVSKP-RVEIQGGDMRSFFTLVMTDPDVPGPSDPY 77
           P   + V Y   +V   G  L P+ V ++P  +   G D    +TLV+TDPD P   DP 
Sbjct: 20  PQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPK 79
Query: 78  LREHLHWIVTDIPGTTDATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP--- 132
            RE  H++V ++ G  + + G  L  Y    P    G+HR+V+++++Q      + P   
Sbjct: 80  YREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILS 138
Query: 133 -SSRDH---FNTRAFAAENDLGLPVAAVYFNAQRE 163
             S DH   F   +F  + +LG PVA   + A+ +
Sbjct: 139 NRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWD 173

>pdb|1A44|A Chain A, Phosphatidylethanolamine Binding Protein From Calf Brain Length = 185

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 20  PSIKMSVTYNNKQVCN-GHELFPSTVVSKP-RVEIQGGDMRSFFTLVMTDPDVPGPSDPY 77
           P   + V Y   +V   G  L P+ V ++P  +   G D    +TLV+TDPD P   DP 
Sbjct: 20  PQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPK 79
Query: 78  LREHLHWIVTDIPGTTDATFGRELVSY--EIPRPNIGIHRFVFVLFKQTRRQTVNPP--- 132
            RE  H++V ++ G  + + G  L  Y    P    G+HR+V+++++Q      + P   
Sbjct: 80  YREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILS 138
Query: 133 -SSRDH---FNTRAFAAENDLGLPVAAVYFNAQRE 163
             S DH   F   +F  + +LG PVA   + A+ +
Sbjct: 139 NRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWD 173

>pdb|1WPX|B Chain B, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 220

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 43/157 (27%)
Query: 9   GVIGDVIE--SFTPSIKMSVTYNNKQ-VCNGHELFPSTVVSKPRVEI------------- 52
           G++ DVI   SF PS  ++V Y++   V  G+ L      SKP+ +              
Sbjct: 20  GILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQA 79
Query: 53  -----QGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAT---------FG 98
                Q  D+   FTLVMTDPD P  +D    E  H +  D+    +AT         F 
Sbjct: 80  NAYVPQDDDL---FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFA 136
Query: 99  RE--------LVSYEIPRP--NIGIHRFVFVLFKQTR 125
            E        L+ Y  P P    G HR+VF+L+KQ +
Sbjct: 137 SEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPK 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	8e-73
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	2e-72
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	4e-54
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	6e-52
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	1e-51
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	3e-51
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180

 Score =  215 bits (550), Expect = 8e-73
 Identities = 128/170 (75%), Positives = 152/170 (89%), Gaps = 1/170 (0%)

Query: 1   MLEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSF 60
           ++EPL +G V+GDV++ FTP+ KM+V+YN KQV NGHELFPS+V SKPRVEI GGD+RSF
Sbjct: 11  VIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSF 70

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVL 120
           FTLVM DPDVPGPSDP+L+EHLHWIVT+IPGTTDATFG+E+VSYE+PRP+IGIHRFVFVL
Sbjct: 71  FTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVL 130

Query: 121 FKQTRRQTVNP-PSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 169
           F+Q +R+ + P   SRDHFNTR FA E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 131 FRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170

 Score =  214 bits (547), Expect = 2e-72
 Identities = 101/161 (62%), Positives = 124/161 (77%)

Query: 3   EPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 62
           +PL VG V+GDV+++F  S  + VTY +K V NG EL PS V  +PRVE+ G DMR+F+T
Sbjct: 9   DPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTFYT 68

Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 122
           LVM DPD P PSDP LRE+LHW+VTDIPGTT A+FG+E++SYE PRP +GIHR VFVLF+
Sbjct: 69  LVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQ 128

Query: 123 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
           Q  RQTV  P  R +FNT+ FA   +LG PVAAVYFN+QRE
Sbjct: 129 QLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179

 Score =  168 bits (427), Expect = 4e-54
 Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 12/168 (7%)

Query: 7   VGGVIGDVIESFTPSIKMSVTY-NNKQVCNGHELFPSTVVSKPRVEIQGGDMR-SFFTLV 64
           +  ++ DV+++  P+  + V Y ++ +V  G+EL P+ V  +P V   G + + +  TL+
Sbjct: 1   MDDIVPDVLDAV-PAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLL 59

Query: 65  MTDPDVPGPSDPYLREHLHWIVTDIPGTTD-ATFGRELVSYEIPR--PNIGIHRFVFVLF 121
           M DPD P   DP  RE LHW V +IPG+ +  + G  L  Y       + G+HR++F+L+
Sbjct: 60  MVDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLY 119

Query: 122 KQTRRQTVNPPSS------RDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
           +Q  +    P  S      R +FN R FAA++ LG P+AA Y+ AQ +
Sbjct: 120 RQENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190

 Score =  163 bits (413), Expect = 6e-52
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 8   GGVIGDVIESFTPSIKMSVTYNNKQ-VCNGHELFPSTVVSKPR-VEIQGGDMRSFFTLVM 65
           G +    +    P   + V Y        G  L P+ V+++P  +   G D    +TLV+
Sbjct: 13  GPLSLQEV-DEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVL 71

Query: 66  TDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSY--EIPRPNIGIHRFVFVLFKQ 123
           TDPD P   DP  RE  H++V ++ G  D + G  L  Y    P  + G+HR+V+++++Q
Sbjct: 72  TDPDAPSRKDPKFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQ 130

Query: 124 TRRQTVNPP-------SSRDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
            +    + P        +R  F   +F  +  LG PVA   F A+ +
Sbjct: 131 EQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWD 177

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200

 Score =  162 bits (412), Expect = 1e-51
 Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 26/187 (13%)

Query: 2   LEPLAVGGVIGDVI--ESFTPSIKMSVTY-NNKQVCNGHELFPSTVVSKPRVEIQGG--D 56
           +E L    +I  V   E+   ++ M +++ + K+V +G+ L  +   S PR         
Sbjct: 15  IEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPP 74

Query: 57  MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT----DATFGRELVSYEIPRP--N 110
               + L M DPD P    P  R+++HW V+ I               L+ Y  P     
Sbjct: 75  EDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKG 134

Query: 111 IGIHRFVFVLFKQTRRQTVNPPS----------SRDHFNTRAFAA----ENDLGLPVAAV 156
            G+HR  F+L         N             +R  FN    A      ND+   V   
Sbjct: 135 TGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRVKFNNCQSAYNVIQMNDMK-IVGFN 193

Query: 157 YFNAQRE 163
           +   +R+
Sbjct: 194 WCQMRRK 200

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220

 Score =  162 bits (411), Expect = 3e-51
 Identities = 53/210 (25%), Positives = 79/210 (37%), Gaps = 48/210 (22%)

Query: 1   MLEPLAVGGVIGDVIE--SFTPSIKMSVTYNNK-QVCNGHELFPSTVVSKPRVEIQGGDM 57
            ++     G++ DVI   SF PS  ++V Y++   V  G+ L      SKP+ +      
Sbjct: 12  SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQ 71

Query: 58  R---------------SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAT------ 96
                             FTLVMTDPD P  +D    E  H +  D+    +AT      
Sbjct: 72  MQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGA 131

Query: 97  -----------FGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTV----------NPPS 133
                          L+ Y  P P    G HR+VF+L+KQ +              N   
Sbjct: 132 TEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGY 191

Query: 134 SRDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
                    +A EN+L   VA+ +F A+ +
Sbjct: 192 GTPATGVGKWAKENNLQ-LVASNFFYAETK 220

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} Length = 153

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 17/75 (22%)

Query: 61  FTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA--------------TFGRELVSYEI 106
             L++ DPDVP          +HWIV ++                    T G   + Y  
Sbjct: 44  LVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGE--IGYCP 100

Query: 107 PRPNIGIHRFVFVLF 121
           P P    HR+ F  +
Sbjct: 101 PCPPDAKHRYYFYAY 115

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 20/161 (12%)

Query: 4   PLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT- 62
           P  +  +I + I     +       N  ++        +T++      ++  + R  F  
Sbjct: 327 PRRLS-IIAESIRDGLATWDNWKHVNCDKL--------TTIIESSLNVLEPAEYRKMFDR 377

Query: 63  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEI-----PRPNIGIHRFV 117
           L +  P    P+   L   + W   D+  +       +L  Y +         I I    
Sbjct: 378 LSVFPPSAHIPTI--LLSLI-W--FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432

Query: 118 FVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYF 158
             L  +   +     S  DH+N       +DL  P    YF
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	100.0
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	100.0
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	100.0
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	100.0
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	100.0
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	100.0
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	99.88
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	99.86
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	99.85
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	99.79

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A

Probab=100.00  E-value=3.5e-54  Score=332.48  Aligned_cols=168  Identities=76%  Similarity=1.289  Sum_probs=153.2

Q ss_pred             CCCcccCCcccccCCCCCCCeeEEEEECCeeecCCcccCcccccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeE
Q 035977            2 LEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREH   81 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~f~P~~~L~V~y~~~~v~~G~~l~~~~t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~   81 (169)
                      +++|++++||||+|+.|.|++.|+|+|++..|.+|+.|++++++.+|+|+|++.+.+++|||+|+|||+|+++++++++|
T Consensus        12 ~~~l~~~~vipdvl~~f~P~~~l~V~y~s~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~~p~~~~~   91 (180)
T 1wko_A           12 IEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPFLKEH   91 (180)
T ss_dssp             THHHHHTTHHHHTBCCCCCCSEEEEEETTEECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTTBCTTCCE
T ss_pred             HHHHHhCCCCCCccCCcCCCeeEEEEECCeEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCccCCCccE
Confidence            57899999999999999999999999999999999999999999999999998766779999999999999999999999


Q ss_pred             EEEEEecCCCCcCCCCCceeeccCCCCCCCCCceEEEEEeeeCCCCCCCC-CCCCCCccHHHHHHHcCCCCceEEEEEEE
Q 035977           82 LHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNP-PSSRDHFNTRAFAAENDLGLPVAAVYFNA  160 (169)
Q Consensus        82 lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRY~flL~~q~~~~~~~~-~~~R~~F~~~~F~~~~~L~~pva~~~f~~  160 (169)
                      +|||++|||++.+...|..+++|.||+|++|.|||+|+||+|+..+.+.. +..|.+||+++|+++++|+.|||+|||++
T Consensus        92 ~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa~~fF~~  171 (180)
T 1wko_A           92 LHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNA  171 (180)
T ss_dssp             EEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EEEEEeccCcCccccCCceeeeeCCCCCCCCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEEEEEEEE
Confidence            99999999998665678999999999999999999999999999887754 78999999999999999999999999999


Q ss_pred             eeCCCCCCC
Q 035977          161 QRETAARRR  169 (169)
Q Consensus       161 ~~d~~~~~~  169 (169)
                      |||+.+|||
T Consensus       172 q~d~~~r~~  180 (180)
T 1wko_A          172 QRETAARKR  180 (180)
T ss_dssp             CCC------
T ss_pred             EECCcccCC
Confidence            999999997

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A

Probab=100.00  E-value=7.7e-53  Score=322.32  Aligned_cols=163  Identities=62%  Similarity=1.045  Sum_probs=155.2

Q ss_pred             CCCcccCCcccccCCCCCCCeeEEEEECCeeecCCcccCcccccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeE
Q 035977            2 LEPLAVGGVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREH   81 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~f~P~~~L~V~y~~~~v~~G~~l~~~~t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~   81 (169)
                      |++|++++||||||+.|.|++.|+|+|++..|.+|+.|+++++..+|.|+|++.+.+++|||+|+|||+|+++++++++|
T Consensus         8 ~~~l~~~~vipdvl~~F~P~~~l~v~y~s~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~~p~~~~~   87 (170)
T 3axy_A            8 RDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDPNLREY   87 (170)
T ss_dssp             TCHHHHTTHHHHTBCCCCCCSCEEEEETTEECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTTSCTTCSE
T ss_pred             hchhhhCCccccccCCcCCceEEEEEECCeEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCccCCCccE
Confidence            78999999999999999999999999999999999999999999999999998766899999999999999999999999


Q ss_pred             EEEEEecCCCCcCCCCCceeeccCCCCCCCCCceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcCCCCceEEEEEEEe
Q 035977           82 LHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQ  161 (169)
Q Consensus        82 lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~~~f~~~  161 (169)
                      +||+++||+++.+.+.|..+++|.||+|++|.|||+|+||+|+..+.+.++..|.+||+++|+++++|+.|||+|||++|
T Consensus        88 ~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~~p~~R~~F~~~~F~~~~~Lg~Pva~~fF~~q  167 (170)
T 3axy_A           88 LHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQ  167 (170)
T ss_dssp             EEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCCCCCCCSCSTTCCHHHHHHHTTCCSCSEEEEEEEC
T ss_pred             EEEEEeCCCCCccccCCceeceecCCCCCCCcEEEEEEEEecCCccCCCCccccCCcCHHHHHHHhCCCCcEEEEEEEEE
Confidence            99999999998666778899999999999999999999999999888777889999999999999999999999999999


Q ss_pred             eCC
Q 035977          162 RET  164 (169)
Q Consensus       162 ~d~  164 (169)
                      ||+
T Consensus       168 ~d~  170 (170)
T 3axy_A          168 REA  170 (170)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            985

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A

Probab=100.00  E-value=1.4e-48  Score=303.57  Aligned_cols=164  Identities=29%  Similarity=0.553  Sum_probs=151.9

Q ss_pred             CCCCccc--CCcccccCCCCCCCeeEEEEEC-CeeecCCcccCcccccCCCe-EEEecCCCCceEEEEEeCCCCCCCCCC
Q 035977            1 MLEPLAV--GGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPR-VEIQGGDMRSFFTLVMTDPDVPGPSDP   76 (169)
Q Consensus         1 ~~~~l~~--~~iipdv~~~f~P~~~L~V~y~-~~~v~~G~~l~~~~t~~~P~-i~~~~~~~~~~ytlimvDpD~p~~~~~   76 (169)
                      |.++|++  ++||||+|+. .|+..|+|+|+ +..|.+|+.|+++++...|. |+|++.+.+++|||+|+|||+|++.++
T Consensus         4 ~~~~~~~~~~~vipdvl~~-~p~~~l~v~~~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~~p   82 (190)
T 2iqy_A            4 MAADISQWAGPLSLQEVDE-PPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDP   82 (190)
T ss_dssp             SSCCGGGTTSTTCGGGTSS-CCSEECEEECSSCBCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSSSC
T ss_pred             HHHHHHHhcCccCCcCcCC-CCCceEEEEECCCcccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCCCC
Confidence            6789999  9999999998 99999999995 58899999999999999999 999987657999999999999999999


Q ss_pred             CCCeEEEEEEecCCCCcCCCCCceeeccCCCCC--CCCCceEEEEEeeeCCCCCCC-------CCCCCCCccHHHHHHHc
Q 035977           77 YLREHLHWIVTDIPGTTDATFGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVN-------PPSSRDHFNTRAFAAEN  147 (169)
Q Consensus        77 ~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~-------~~~~R~~F~~~~F~~~~  147 (169)
                      ++++|+||+++|||++ ++..|..+++|.||+|  |+|.|||+|+||+|+..+.+.       .+..|.+||+++|++++
T Consensus        83 ~~~~~~HWlv~nIp~~-~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~~  161 (190)
T 2iqy_A           83 KFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKY  161 (190)
T ss_dssp             TTCCEEEEEEEEEETT-BGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHHT
T ss_pred             CcCCEEEEEEeCCChh-ccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHHh
Confidence            9999999999999998 6778999999999999  688999999999999887654       25789999999999999


Q ss_pred             CCCCceEEEEEEEeeCCCC
Q 035977          148 DLGLPVAAVYFNAQRETAA  166 (169)
Q Consensus       148 ~L~~pva~~~f~~~~d~~~  166 (169)
                      +|+.|||+|||+++||++.
T Consensus       162 ~Lg~pVA~~fF~~q~d~~v  180 (190)
T 2iqy_A          162 HLGAPVAGTCFQAEWDDSV  180 (190)
T ss_dssp             TCCSCSEEEEEEECCCTTH
T ss_pred             CCCCeeEEEEEEEEccCch
Confidence            9999999999999999863

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}

Probab=100.00  E-value=3.8e-47  Score=292.94  Aligned_cols=157  Identities=36%  Similarity=0.687  Sum_probs=143.5

Q ss_pred             CCcccccCCCCCCCeeEEEEEC-CeeecCCcccCcccccCCCeEEEecCCC-CceEEEEEeCCCCCCCCCCCCCeEEEEE
Q 035977            8 GGVIGDVIESFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDM-RSFFTLVMTDPDVPGPSDPYLREHLHWI   85 (169)
Q Consensus         8 ~~iipdv~~~f~P~~~L~V~y~-~~~v~~G~~l~~~~t~~~P~i~~~~~~~-~~~ytlimvDpD~p~~~~~~~~~~lHwl   85 (169)
                      ++||||+|+. .|++.|+|+|+ +..|.+|+.|+++++..+|.|+|++.+. +++|||+|+|||+|++++++.++|+|||
T Consensus         2 ~~vipdvl~~-~P~~~l~V~y~~~~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HWl   80 (179)
T 2jyz_A            2 DDIVPDVLDA-VPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWS   80 (179)
T ss_dssp             CCBTTTTBSS-CCSEECEEESSSSCCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCCE
T ss_pred             CcccCcCcCC-CCcCeEEEEECCCcccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEEE
Confidence            6899999999 99999999997 5899999999999999999999997654 3999999999999999998899999999


Q ss_pred             EecCCCCc-CCCCCceeeccCCCCC--CCCCceEEEEEeeeCCCCCC------CCCCCCCCccHHHHHHHcCCCCceEEE
Q 035977           86 VTDIPGTT-DATFGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTV------NPPSSRDHFNTRAFAAENDLGLPVAAV  156 (169)
Q Consensus        86 v~ni~~~~-~~~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~------~~~~~R~~F~~~~F~~~~~L~~pva~~  156 (169)
                      ++|||++. ++..|..+++|.||+|  ++|.|||+|+||+|+..+..      ..+..|.+||+++|+++++|+.|||+|
T Consensus        81 v~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA~~  160 (179)
T 2jyz_A           81 VVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAAN  160 (179)
T ss_dssp             EECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCCCSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSEEE
T ss_pred             EECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCCchhhccCCCcccCCCcCHHHHHHHhCCCCccEEE
Confidence            99999875 5678999999999999  68899999999999987751      135789999999999999999999999


Q ss_pred             EEEEeeCCC
Q 035977          157 YFNAQRETA  165 (169)
Q Consensus       157 ~f~~~~d~~  165 (169)
                      ||+++||++
T Consensus       161 ~F~~q~d~~  169 (179)
T 2jyz_A          161 YYQAQYDDY  169 (179)
T ss_dssp             EEEECCCTH
T ss_pred             EEEEEecCc
Confidence            999999985

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A

Probab=100.00  E-value=2.1e-45  Score=287.62  Aligned_cols=160  Identities=26%  Similarity=0.408  Sum_probs=141.3

Q ss_pred             CCCcccCCcccccCCC--CCCCeeEEEEEC-CeeecCCcccCcccccCCCe-EEEecCCC-CceEEEEEeCCCCCCCCCC
Q 035977            2 LEPLAVGGVIGDVIES--FTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPR-VEIQGGDM-RSFFTLVMTDPDVPGPSDP   76 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~--f~P~~~L~V~y~-~~~v~~G~~l~~~~t~~~P~-i~~~~~~~-~~~ytlimvDpD~p~~~~~   76 (169)
                      +++|++++||||+||.  |+|++.|+|+|+ +..|.+|+.|++++++.+|. |+|++.+. +++|||+|+|||+|++.++
T Consensus        15 ~~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~~~~   94 (200)
T 2gzq_A           15 IEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPSRRRP   94 (200)
T ss_dssp             HHHHHHTTHHHHTSSSSCCCCCCCEEEEEETTEEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSCSSCC
T ss_pred             HHHHHhCCccCcccCCCCCcceeEEEEEECCCcccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCCCCCC
Confidence            4679999999999964  999999999998 69999999999999999998 99998644 7999999999999999999


Q ss_pred             CCCeEEEEEEecCCCCcCCCCC-----ceeeccCCCCC--CCCCceEEEEEe--eeCCCCCCCC---C-----CCCCCcc
Q 035977           77 YLREHLHWIVTDIPGTTDATFG-----RELVSYEIPRP--NIGIHRFVFVLF--KQTRRQTVNP---P-----SSRDHFN  139 (169)
Q Consensus        77 ~~~~~lHwlv~ni~~~~~~~~g-----~~~~~Y~~P~P--~~g~HRY~flL~--~q~~~~~~~~---~-----~~R~~F~  139 (169)
                      +.++|+||+++|||++. ...|     ..+++|.||+|  ++|.|||+|+||  +|+..+.+..   .     .+|.+||
T Consensus        95 ~~~~~~HWlv~nIp~~~-~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R~~F~  173 (200)
T 2gzq_A           95 DGRDYVHWAVSGIKSKE-LVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRVKFN  173 (200)
T ss_dssp             TTCSEEEEEEEEECSSE-EETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCCCGGGCCTTHHH
T ss_pred             CCCCEEEEEEeCCCcCc-ccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCccccccccccCccc
Confidence            99999999999999863 3333     47999999999  788999999985  9998776532   2     3899999


Q ss_pred             HH----HHHHHcCCCCceEEEEEEEeeC
Q 035977          140 TR----AFAAENDLGLPVAAVYFNAQRE  163 (169)
Q Consensus       140 ~~----~F~~~~~L~~pva~~~f~~~~d  163 (169)
                      ++    +|++++|| +|||+|||+++++
T Consensus       174 ~~~gv~~F~~~~gL-~pVganfF~~~n~  200 (200)
T 2gzq_A          174 NCQSAYNVIQMNDM-KIVGFNWCQMRRK  200 (200)
T ss_dssp             HTCCHHHHHHHTTC-EEEEEEEEEEECC
T ss_pred             cchhhHHHHHHcCC-EEEEEEEEEEecC
Confidence            97    89999999 5899999999974

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1

Probab=100.00  E-value=9.8e-45  Score=287.59  Aligned_cols=161  Identities=32%  Similarity=0.520  Sum_probs=142.5

Q ss_pred             CCCcccCCcccccCCC--CCCCeeEEEEECC-eeecCCcccCcccccCCCeEEEec----------C-----CCCceEEE
Q 035977            2 LEPLAVGGVIGDVIES--FTPSIKMSVTYNN-KQVCNGHELFPSTVVSKPRVEIQG----------G-----DMRSFFTL   63 (169)
Q Consensus         2 ~~~l~~~~iipdv~~~--f~P~~~L~V~y~~-~~v~~G~~l~~~~t~~~P~i~~~~----------~-----~~~~~ytl   63 (169)
                      +++|++++||||||+.  |.|++.|+|+|++ ..|.+|+.|+++++...|.|+|..          .     +.+++|+|
T Consensus        13 ~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~~~l   92 (220)
T 1wpx_B           13 IDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTL   92 (220)
T ss_dssp             HHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEEE
T ss_pred             HHHHHhCCCCccccCCcCCCCceEEEEEECCCcEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCceEEE
Confidence            5789999999999998  9999999999996 789999999999999999999982          1     24789999


Q ss_pred             EEeCCCCCCCCCCCCCeEEEEEEecCCCCcC---------------C-CCC-ceeeccCCCCC--CCCCceEEEEEeeeC
Q 035977           64 VMTDPDVPGPSDPYLREHLHWIVTDIPGTTD---------------A-TFG-RELVSYEIPRP--NIGIHRFVFVLFKQT  124 (169)
Q Consensus        64 imvDpD~p~~~~~~~~~~lHwlv~ni~~~~~---------------~-~~g-~~~~~Y~~P~P--~~g~HRY~flL~~q~  124 (169)
                      +|+|||+|++.++++++|+||+++|||++..               . +.| ..+++|.||+|  |+|.|||+|+||+|+
T Consensus        93 vm~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya~~  172 (220)
T 1wpx_B           93 VMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQP  172 (220)
T ss_dssp             EEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECC
T ss_pred             EEECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEEecC
Confidence            9999999999888889999999999997521               1 235 68899999999  578999999999999


Q ss_pred             CCCCC---CCCCCCCCcc-------HHHHHHHcCCCCceEEEEEEEeeC
Q 035977          125 RRQTV---NPPSSRDHFN-------TRAFAAENDLGLPVAAVYFNAQRE  163 (169)
Q Consensus       125 ~~~~~---~~~~~R~~F~-------~~~F~~~~~L~~pva~~~f~~~~d  163 (169)
                      ..+.+   ..+..|.+|+       +++|+++++| .|||+|||++||+
T Consensus       173 ~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L-~pVAanfF~~q~~  220 (220)
T 1wpx_B          173 KGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNL-QLVASNFFYAETK  220 (220)
T ss_dssp             TTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTC-EEEEEEEEEECCC
T ss_pred             CcCCccccCCcccccCCCccccchhHHHHHHHhCC-eEEEEEEEEEecC
Confidence            98763   3467899999       9999999999 6899999999996

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2

Probab=99.88  E-value=1.7e-22  Score=153.52  Aligned_cols=96  Identities=23%  Similarity=0.396  Sum_probs=77.4

Q ss_pred             CeeecCCcccCcccccC---------CCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc-CCCCC
Q 035977           30 NKQVCNGHELFPSTVVS---------KPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DATFG   98 (169)
Q Consensus        30 ~~~v~~G~~l~~~~t~~---------~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g   98 (169)
                      +..+..|+.|+...+..         +|.|+|++.+ .+++|+|+|+|||+|++     ++|+||+++|||++. .+..|
T Consensus         7 S~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g   81 (166)
T 1fux_A            7 SNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVD   81 (166)
T ss_dssp             CSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTT
T ss_pred             ccCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC-----CcEEEeEEeCcCCCcccccCC
Confidence            56688999999988766         9999999864 46999999999999964     479999999999753 11111


Q ss_pred             ------------c-------eeeccCCCCC--CCCCceEEEEEeeeCC-CCCCC
Q 035977           99 ------------R-------ELVSYEIPRP--NIGIHRFVFVLFKQTR-RQTVN  130 (169)
Q Consensus        99 ------------~-------~~~~Y~~P~P--~~g~HRY~flL~~q~~-~~~~~  130 (169)
                                  .       ....|.||+|  ++|.|||+|+||+|+. .+.+.
T Consensus        82 ~~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~  135 (166)
T 1fux_A           82 AGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD  135 (166)
T ss_dssp             TTCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC
T ss_pred             ccccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCC
Confidence                        1       4789999999  5668999999999997 57653

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0

Probab=99.86  E-value=5.7e-21  Score=143.20  Aligned_cols=112  Identities=18%  Similarity=0.275  Sum_probs=83.5

Q ss_pred             eeecCCcccCcccc----cCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCc-CCCCC------
Q 035977           31 KQVCNGHELFPSTV----VSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DATFG------   98 (169)
Q Consensus        31 ~~v~~G~~l~~~~t----~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g------   98 (169)
                      ..+..|..|+...+    ...|.|+|++.+ .+++|+|+|+|||+|++.++ .++|+||+++|||++. .+..|      
T Consensus         9 ~~f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~   87 (153)
T 3n08_A            9 QAFSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAV   87 (153)
T ss_dssp             TTBCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSE
T ss_pred             CCcCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCce
Confidence            34556666665543    468999999864 36899999999999988764 4799999999999853 11111      


Q ss_pred             -----ceeeccCCCCCCCCCceEEEEEeeeCCCCCCCCCCCCCCccHHHHHHHcC
Q 035977           99 -----RELVSYEIPRPNIGIHRFVFVLFKQTRRQTVNPPSSRDHFNTRAFAAEND  148 (169)
Q Consensus        99 -----~~~~~Y~~P~P~~g~HRY~flL~~q~~~~~~~~~~~R~~F~~~~F~~~~~  148 (169)
                           -....|.||+|+.|.|||+|+||+|+..+.+.     ..+...++.+...
T Consensus        88 ~g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~-----~~~~~~~l~~a~~  137 (153)
T 3n08_A           88 QGLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDE-----EGVTKEQLLEAMD  137 (153)
T ss_dssp             ECBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCC-----SSCCHHHHHHHHT
T ss_pred             EeecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCC-----CCCCHHHHHHHhh
Confidence                 14689999999777799999999999887653     2556666665544

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*

Probab=99.85  E-value=3.9e-21  Score=145.06  Aligned_cols=95  Identities=23%  Similarity=0.404  Sum_probs=71.5

Q ss_pred             eeecCCcccCccc---------ccCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC-CCCCc
Q 035977           31 KQVCNGHELFPST---------VVSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-ATFGR   99 (169)
Q Consensus        31 ~~v~~G~~l~~~~---------t~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-~~~g~   99 (169)
                      ..+..|..|+...         -..+|.|+|++.+ .+++|+|+|+|||+|++     ++|+||+++|||++.. +..|.
T Consensus         7 ~~f~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~   81 (159)
T 1fjj_A            7 NDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGF   81 (159)
T ss_dssp             SSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTG
T ss_pred             cCcCCcCCCChhHhccccccCCCCcCCeEEEcCCCCCCeEEEEEEECCCCCCC-----CcEEEEEEEccCCCccccCCCc
Confidence            3445565555542         2558899999863 47999999999999974     4799999999997631 11111


Q ss_pred             ------------------eeeccCCCCCCCC-CceEEEEEeeeCC-CCCCC
Q 035977          100 ------------------ELVSYEIPRPNIG-IHRFVFVLFKQTR-RQTVN  130 (169)
Q Consensus       100 ------------------~~~~Y~~P~P~~g-~HRY~flL~~q~~-~~~~~  130 (169)
                                        ....|.||+|+.| .|||+|+||+|+. .+.+.
T Consensus        82 ~~~~~~~~~g~~~g~n~~g~~~Y~GP~PP~g~~HRY~F~lyald~~~l~l~  132 (159)
T 1fjj_A           82 GSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVD  132 (159)
T ss_dssp             GGTSSCCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCC
T ss_pred             ccccccCCCCcEEeecCCCCCcccCCCCcCCCceEEEEEEEEccCcccCCC
Confidence                              3789999999666 8999999999997 57663

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}

Probab=99.79  E-value=5.1e-19  Score=138.37  Aligned_cols=118  Identities=16%  Similarity=0.192  Sum_probs=81.2

Q ss_pred             CcccCcc--cccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcCCC-----------------
Q 035977           36 GHELFPS--TVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAT-----------------   96 (169)
Q Consensus        36 G~~l~~~--~t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~~~-----------------   96 (169)
                      |..+++.  .-...|.|+|++.+.+++|+|+|+|||+|+++   ..+|+||+++||+... +.                 
T Consensus        47 G~~~sP~~~~p~~Sp~L~W~~~~gtks~aLvm~DPDAP~~~---g~~~~HWvv~NI~~~~-l~eg~~~~~~g~~qG~N~~  122 (207)
T 2evv_A           47 PKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVC---GMPFVHWVVGNIAHNV-LEENASMMDKRIVQGVNSL  122 (207)
T ss_dssp             CGGGBCTTSCBCCCCCEEECCCTTCSEEEEEEEETTHHHHH---SSCEEEEEEEEECSSE-ECTTHHHHCSSSEECCCTT
T ss_pred             CCCcCCccCCCCccceEEEecCCCCeEEEEEEECCCCCCCC---CCcEEEEEEeCCCCCc-cccCcccCCCCceeccccc
Confidence            5555542  22345679998876679999999999999864   3689999999995331 11                 


Q ss_pred             ---CCcee-------------eccCCCCCCCCCceEEEEEeeeCC-CCCCCCCCCCCCccHHHHHHHcCCCCceEEEEEE
Q 035977           97 ---FGREL-------------VSYEIPRPNIGIHRFVFVLFKQTR-RQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFN  159 (169)
Q Consensus        97 ---~g~~~-------------~~Y~~P~P~~g~HRY~flL~~q~~-~~~~~~~~~R~~F~~~~F~~~~~L~~pva~~~f~  159 (169)
                         .|...             ..|.||+|+.|.|||+|+||+|+. .+.+.     ..|...++.+...-. .+|-.-.+
T Consensus       123 ~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G~HRYvF~vyALd~~~L~l~-----~~~~~~~l~~am~gH-vLa~a~l~  196 (207)
T 2evv_A          123 TQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALK-----APFFLGDLHDKMRNH-IIAIGRKE  196 (207)
T ss_dssp             CSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSSCEEEEEEEEEESSSCCCCC-----SSCCHHHHHHHHTTC-EEEEEEEE
T ss_pred             ccccccccccccccccccccccccCCCCCCCCcEEEEEEEEEecCccCCCC-----CCCCHHHHHHHhhcC-eEEEEEEE
Confidence               12211             889999998899999999999997 66553     456666666555432 25544444


Q ss_pred             EeeC
Q 035977          160 AQRE  163 (169)
Q Consensus       160 ~~~d  163 (169)
                      ..+.
T Consensus       197 g~y~  200 (207)
T 2evv_A          197 FLYK  200 (207)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            4443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1qoua_	164	b.17.1.1 (A:) Centroradialis protein Cen {Garden s	8e-66
d1a44a_	185	b.17.1.1 (A:) Phosphatidylethanolamine binding pro	6e-52
d1wpxb1	219	b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor	3e-44
d1fjja_	159	b.17.1.2 (A:) Hypothetical protein YbhB {Escherich	7e-05
d1fuxa_	165	b.17.1.2 (A:) Hypothetical protein YbcL {Escherich	4e-04

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

 Score =  196 bits (499), Expect = 8e-66
 Identities = 118/164 (71%), Positives = 134/164 (81%), Gaps = 7/164 (4%)

Query: 8   GGVIGDVIESFTPSIKMSVTYNN----KQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTL 63
           G VIGDV++ FT ++KMSV YN+    K V NGHELFPS V S PRVE+ GGDMRSFFTL
Sbjct: 1   GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTL 60

Query: 64  VMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQ 123
           +MTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FG+E+VSYE+PRPNIGIHRFVF+LFKQ
Sbjct: 61  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQ 120

Query: 124 TRRQTV---NPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRET 164
            +R       P   RD FNTR F  EN+LGLPVAAV+FN QRET
Sbjct: 121 KKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRET 164

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  162 bits (410), Expect = 6e-52
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 12/155 (7%)

Query: 18  FTPSIKMSVTYNNKQVCN-GHELFPSTVVSKP-RVEIQGGDMRSFFTLVMTDPDVPGPSD 75
             P   + V Y   +V   G  L P+ V ++P  +   G D    +TLV+TDPD P   D
Sbjct: 18  ERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKD 77

Query: 76  PYLREHLHWIVTDIPGTTDATFGRELVSYEIPR--PNIGIHRFVFVLFKQTRRQTVNPP- 132
           P  RE  H++V ++ G  + + G  L  Y         G+HR+V+++++Q      + P 
Sbjct: 78  PKYREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPI 136

Query: 133 ------SSRDHFNTRAFAAENDLGLPVAAVYFNAQ 161
                   R  F   +F  + +LG PVA   + A+
Sbjct: 137 LSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  143 bits (362), Expect = 3e-44
 Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 48/209 (22%)

Query: 2   LEPLAVGGVIGDVIE--SFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQGGDMR 58
           ++     G++ DVI   SF PS  ++V Y+ +  V  G+ L      SKP+ +       
Sbjct: 12  IDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQM 71

Query: 59  ---------------SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAT------- 96
                            FTLVMTDPD P  +D    E  H +  D+    +AT       
Sbjct: 72  QKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGAT 131

Query: 97  ----------FGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVNPPS----------S 134
                         L+ Y  P P    G HR+VF+L+KQ +    +  S           
Sbjct: 132 EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYG 191

Query: 135 RDHFNTRAFAAENDLGLPVAAVYFNAQRE 163
                   +A EN+L   VA+ +F A+ +
Sbjct: 192 TPATGVGKWAKENNLQ-LVASNFFYAETK 219

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Length = 159

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (90), Expect = 7e-05
 Identities = 24/144 (16%), Positives = 40/144 (27%), Gaps = 33/144 (22%)

Query: 17  SFTPSIKMSVTY-NNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSD 75
                 K+   +  N    +G  + P           +       F +   DPD P  S 
Sbjct: 8   DLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKS------FVVTCYDPDAPTGSG 61

Query: 76  PYLREHLHWIVTDIPGTTDA-------------------TFGRELVSYEIPRPNIG-IHR 115
            +     HW+V ++P  T                             Y+   P  G  HR
Sbjct: 62  WW-----HWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHR 116

Query: 116 FVFVLFK-QTRRQTVNPPSSRDHF 138
           ++F +      R  V+  +S    
Sbjct: 117 YIFTVHALDIERIDVDEGASGAMV 140

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 34/132 (25%)

Query: 30  NKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDI 89
           +   C G    PS   S      +       F + + DPD P  S  +     HW V +I
Sbjct: 22  SGFGCEGGNTSPSLTWSGVPEGTKS------FAVTVYDPDAPTGSGWW-----HWTVVNI 70

Query: 90  PGTT-------DATFGRELVSYEI---------------PRPNIGIHRFVFVLFKQ-TRR 126
           P T            G +L +  +               P      H + F ++   T +
Sbjct: 71  PATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEK 130

Query: 127 QTVNPPSSRDHF 138
             V+  SS    
Sbjct: 131 IPVDSNSSGALV 142

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1qoua_	164	Centroradialis protein Cen {Garden snapdragon (Ant	100.0
d1wpxb1	219	Carboxypeptidase Y inhibitor {Baker's yeast (Sacch	100.0
d1a44a_	185	Phosphatidylethanolamine binding protein, PEBP {Co	100.0
d1fuxa_	165	Hypothetical protein YbcL {Escherichia coli [TaxId	99.71
d1fjja_	159	Hypothetical protein YbhB {Escherichia coli [TaxId	99.69

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=100.00  E-value=1.6e-51  Score=311.62  Aligned_cols=157  Identities=75%  Similarity=1.282  Sum_probs=143.5

Q ss_pred             CCcccccCCCCCCCeeEEEEECC----eeecCCcccCcccccCCCeEEEecCCCCceEEEEEeCCCCCCCCCCCCCeEEE
Q 035977            8 GGVIGDVIESFTPSIKMSVTYNN----KQVCNGHELFPSTVVSKPRVEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLH   83 (169)
Q Consensus         8 ~~iipdv~~~f~P~~~L~V~y~~----~~v~~G~~l~~~~t~~~P~i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~lH   83 (169)
                      .+||||||+.|.|++.|+|.|++    ..|.+|+.|++++++.+|+|+|.+.+++++|||+|+|||+|++.+++++++||
T Consensus         1 ~~vipdvld~F~P~~~l~V~y~~~~~~~~V~~G~~l~~~~t~~~P~v~~~~~~~~~~YtlvMvDpDap~~~~~~~~~~lH   80 (164)
T d1qoua_           1 GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLH   80 (164)
T ss_dssp             CTTCTTTSCCCCCCSCEEEEECC---CEECCTTCBCCGGGSSSCCEEEECCCCTTCEEEEEEEECSCSCSSSCTTCCEEE
T ss_pred             CcCCCcccCCCCCCcEEEEEECCCccceEecCCCEeCHHHhccCCEEEEecCCCCceEEEEEECCCCCCCCCCccceEEE
Confidence            47999999999999999999995    46899999999999999999999877789999999999999999999999999


Q ss_pred             EEEecCCCCcCCCCCceeeccCCCCCCCCCceEEEEEeeeCCCCCCC---CCCCCCCccHHHHHHHcCCCCceEEEEEEE
Q 035977           84 WIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFKQTRRQTVN---PPSSRDHFNTRAFAAENDLGLPVAAVYFNA  160 (169)
Q Consensus        84 wlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRY~flL~~q~~~~~~~---~~~~R~~F~~~~F~~~~~L~~pva~~~f~~  160 (169)
                      ||++||++......|+.+++|.+|.|++|.|||+|+||+|+......   ....|++||+++|+++++|+.|||+|||++
T Consensus        81 Wlv~nip~~~~~~~~~~~~~Y~~P~P~tG~HRYvflLf~Q~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~n~F~~  160 (164)
T d1qoua_          81 WIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNC  160 (164)
T ss_dssp             EEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCC-------CCCSBTCCHHHHHHHTTCCSCSEEEEEEE
T ss_pred             EEEecCCCCccccCCceecccCCCCCCCceeEEEEEEEEcCCCcccccCCCccccCCcCHHHHHHHhCCCCceeEEEEEe
Confidence            99999998766677899999999999999999999999999875432   356899999999999999999999999999


Q ss_pred             eeCC
Q 035977          161 QRET  164 (169)
Q Consensus       161 ~~d~  164 (169)
                      |+|+
T Consensus       161 q~~~  164 (164)
T d1qoua_         161 QRET  164 (164)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9985

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-47  Score=300.52  Aligned_cols=160  Identities=31%  Similarity=0.473  Sum_probs=140.1

Q ss_pred             CCcccCCcccccCC--CCCCCeeEEEEEC-CeeecCCcccCcccccCCCeEEEec---------------CCCCceEEEE
Q 035977            3 EPLAVGGVIGDVIE--SFTPSIKMSVTYN-NKQVCNGHELFPSTVVSKPRVEIQG---------------GDMRSFFTLV   64 (169)
Q Consensus         3 ~~l~~~~iipdv~~--~f~P~~~L~V~y~-~~~v~~G~~l~~~~t~~~P~i~~~~---------------~~~~~~ytli   64 (169)
                      ++|++++||||||+  .|.|++.|+|.|+ +..|.+|+.|++++++.+|+|+|..               .+.+++||||
T Consensus        13 ~~~~~~~Iipdvl~~~~F~P~~~L~V~y~~~~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~ytlv   92 (219)
T d1wpxb1          13 DSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTLV   92 (219)
T ss_dssp             HHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEEEE
T ss_pred             HHHHhcCCCCccCCCCCCCCcEEEEEEECCCcCcCCCCEeCHHHhccCCEEEEecCccccccccccccccCCCCCeEEEE
Confidence            57999999999998  5999999999998 4789999999999999999999963               1346899999


Q ss_pred             EeCCCCCCCCCCCCCeEEEEEEecCCCCcC-----------------CCCCceeeccCCCCC--CCCCceEEEEEeeeCC
Q 035977           65 MTDPDVPGPSDPYLREHLHWIVTDIPGTTD-----------------ATFGRELVSYEIPRP--NIGIHRFVFVLFKQTR  125 (169)
Q Consensus        65 mvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-----------------~~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~  125 (169)
                      |+|||+|++.+++.++|||||++||+.+..                 ...|..+++|+||+|  |+|+|||+|+||+|+.
T Consensus        93 m~DPDaP~~~~~~~~~~~HWlv~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~gP~Pp~gtg~HRYvf~l~~Q~~  172 (219)
T d1wpxb1          93 MTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPK  172 (219)
T ss_dssp             EEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECCT
T ss_pred             EECCCCCCCCCCCcceEEEEEEecCCccccccccccCccccCcccccccCCceeecccCCCCCCCCCceEEEEEEEEccC
Confidence            999999999999999999999999986421                 235678999999999  7889999999999998


Q ss_pred             CCCCC---C-------CCCCCCccHHHHHHHcCCCCceEEEEEEEeeC
Q 035977          126 RQTVN---P-------PSSRDHFNTRAFAAENDLGLPVAAVYFNAQRE  163 (169)
Q Consensus       126 ~~~~~---~-------~~~R~~F~~~~F~~~~~L~~pva~~~f~~~~d  163 (169)
                      .+...   .       ...|.+||+++|+++++|+ |||+|||++|+.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~-pVa~n~F~~q~~  219 (219)
T d1wpxb1         173 GVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK  219 (219)
T ss_dssp             TCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred             CCCcccccccccccccccccCCCCHHHHHHHhCCE-EEEEEEEEEecC
Confidence            76532   1       2479999999999999996 999999999974

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-46  Score=288.12  Aligned_cols=148  Identities=29%  Similarity=0.554  Sum_probs=135.2

Q ss_pred             CCCCCeeEEEEECCee-ecCCcccCcccccCCCe-EEEecCCCCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC
Q 035977           17 SFTPSIKMSVTYNNKQ-VCNGHELFPSTVVSKPR-VEIQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD   94 (169)
Q Consensus        17 ~f~P~~~L~V~y~~~~-v~~G~~l~~~~t~~~P~-i~~~~~~~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~   94 (169)
                      ++.|++.|+|+|++.. +.+|+.|++++++.+|+ ++|+..+++++|||+|+|||+|++.+++++++||||++||+++ +
T Consensus        17 d~~P~~~L~V~y~~~~~v~~G~~l~p~~~~~~P~~v~~~~~~~~~~YtlvMvDPDaPs~~~~~~~e~lHWlv~Ni~~~-~   95 (185)
T d1a44a_          17 DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN-N   95 (185)
T ss_dssp             SCCCSEECEEEETTEEECSTTEECCTTTTSSCCSEEECTTCCTTSEEEEEEEETTSSCSSSCTTCCEEEEEEEEEETT-C
T ss_pred             ccCCCceEEEEECCceecCCCCEECHHHHhcCCceEEecCCCCCCeEEEEEECCCCCCCCCCCcceEEEEEEeCCCCC-c
Confidence            5699999999999755 58999999999999995 7888767789999999999999999999999999999999987 6


Q ss_pred             CCCCceeeccCCCCC--CCCCceEEEEEeeeCCCCCCC-------CCCCCCCccHHHHHHHcCCCCceEEEEEEEeeCCC
Q 035977           95 ATFGRELVSYEIPRP--NIGIHRFVFVLFKQTRRQTVN-------PPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETA  165 (169)
Q Consensus        95 ~~~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~~~~~-------~~~~R~~F~~~~F~~~~~L~~pva~~~f~~~~d~~  165 (169)
                      ...|..+++|+||.|  ++|.|||+|+||+|++.+.+.       ....|.+||+++|+++++|+.|||+|||+++||++
T Consensus        96 ~~~g~~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~~~~~~~~~~~~~R~~f~~~~F~~~~~L~~Pva~nfF~~~~D~~  175 (185)
T d1a44a_          96 ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDY  175 (185)
T ss_dssp             GGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCCCCBCTTCCTTCTTCCHHHHHHHTTCCSCSEEEEEEECCCTT
T ss_pred             CCCCeEeeeEecCcCCCCCCceEEEEEEEEccCCCCccccccCCCCccccCCCCHHHHHHHcCCCCCeEEEEEEEecCcH
Confidence            778999999999999  789999999999999876653       24579999999999999999999999999999986

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.8e-17  Score=122.80  Aligned_cols=113  Identities=21%  Similarity=0.324  Sum_probs=78.7

Q ss_pred             CeeecCCcccCcccc---------cCCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC-----
Q 035977           30 NKQVCNGHELFPSTV---------VSKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-----   94 (169)
Q Consensus        30 ~~~v~~G~~l~~~~t---------~~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-----   94 (169)
                      +..+..|..|+...+         ...|.|+|++.+ .+++|+|+|.|+|+|..     ..++||++.|||....     
T Consensus         6 S~~f~~g~~ip~~~~~~~~tc~G~n~SP~L~w~~~P~gtks~ali~~D~Dap~~-----~~~~HWlv~nIp~~~~~l~~~   80 (165)
T d1fuxa_           6 SNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVD   80 (165)
T ss_dssp             CSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTT
T ss_pred             cCCcCCcCCCCHhHhccCCCCCCCccCccEEecCCCCCCeEEEEEEeCCCCCCC-----CcceEEEEEccCccccccccC
Confidence            455677777776532         348999999864 47899999999999865     3699999999986421     


Q ss_pred             C--C-------------CCceeeccCCCCC--CCCCceEEEEEeeeCCC-CCCCCCCCCCCccHHHHHHHcCC
Q 035977           95 A--T-------------FGRELVSYEIPRP--NIGIHRFVFVLFKQTRR-QTVNPPSSRDHFNTRAFAAENDL  149 (169)
Q Consensus        95 ~--~-------------~g~~~~~Y~~P~P--~~g~HRY~flL~~q~~~-~~~~~~~~R~~F~~~~F~~~~~L  149 (169)
                      .  .             .+.....|.||+|  |.|.|||+|.||+.+.. +.+.  .....-++.+.++.+-|
T Consensus        81 ~~~~~~~~~~~g~~~g~n~~g~~~Y~gP~PP~G~~~H~Y~f~vyAL~~~~l~l~--~~~~~~~l~~ai~g~vl  151 (165)
T d1fuxa_          81 AGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD--SNSSGALVGYMLNANKI  151 (165)
T ss_dssp             TTCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC--TTCCHHHHHHHHHTTEE
T ss_pred             cCccccccCCCCeEEecccCCCcCCCCCCCcCCCCcEEEEEEEEEcCCccCCCC--CCCCHHHHHHHHhhCEE
Confidence            0  0             0122357999998  56799999999999754 4443  33333355555555433

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1e-16  Score=118.95  Aligned_cols=113  Identities=21%  Similarity=0.336  Sum_probs=79.5

Q ss_pred             CeeecCCcccCccccc---------CCCeEEEecCC-CCceEEEEEeCCCCCCCCCCCCCeEEEEEEecCCCCcC-----
Q 035977           30 NKQVCNGHELFPSTVV---------SKPRVEIQGGD-MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-----   94 (169)
Q Consensus        30 ~~~v~~G~~l~~~~t~---------~~P~i~~~~~~-~~~~ytlimvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-----   94 (169)
                      +..+..|..|+...+.         ..|.|+|++.+ ..++|+|+|.|+|+|..     ..|+||+++|||+...     
T Consensus         6 S~~f~~g~~iP~~~t~~~~~~~G~n~SP~l~w~~~P~~tks~ali~~D~dap~~-----~~~~HW~~~nIp~~~~~l~~g   80 (159)
T d1fjja_           6 SNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQG   80 (159)
T ss_dssp             CSSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTT
T ss_pred             CCccCCcCCCCHHHhcCCCCCCCCccCceEEecCCCCCCeEEEEEEECCCCCCC-----CCceEEEEEccCCCccccccc
Confidence            4456677777776663         47999999874 47999999999999865     3699999999986531     


Q ss_pred             C-------CCC-------ceeeccCCCCCCCC-CceEEEEEeeeC-CCCCCCCCCCCCCccHHHHHHHcCC
Q 035977           95 A-------TFG-------RELVSYEIPRPNIG-IHRFVFVLFKQT-RRQTVNPPSSRDHFNTRAFAAENDL  149 (169)
Q Consensus        95 ~-------~~g-------~~~~~Y~~P~P~~g-~HRY~flL~~q~-~~~~~~~~~~R~~F~~~~F~~~~~L  149 (169)
                      .       ..|       .....|.||+|+.| .|||+|.||+.+ +.+.++  .....-++.+-++.+-|
T Consensus        81 ~~~~~~~~~~g~~~g~n~~g~~~Y~gPcPP~g~~H~Y~f~vyALd~~~l~l~--~~~~~~~l~~ai~g~vl  149 (159)
T d1fjja_          81 FGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVD--EGASGAMVGFNVHFHSL  149 (159)
T ss_dssp             GGGTSSCCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCC--TTCCHHHHHHHHHHHEE
T ss_pred             ccCccccCCCccEEecccCCCcceeCCCCcCCCcEEEEEEEEEecCccCCCC--CCCCHHHHHHHHhhCEE
Confidence            0       011       12357999999655 799999999998 456653  22233345555555544