Citrus Sinensis ID: 036142

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccEcccccccccEEEEEEEEEccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgfskksqtdgglesenKKWVIAGIAIRaslkpikttktrggresegdyedeeeaglsttptakeariperlpcppaprkrrpsrcnfnngatrefftppdleTVFKLHVEKAN
Flexible Loop (DISEMBL)
mgfskksqtdgglesenkkwviagiairaslkpikttktrggresegdyedeeeaglsttptakeariperlpcppaprkrrpsrcnfnngatrefftppdletVFKLHVEKAN
Low Complexity Region (SEG)
MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTrggresegdyedeeeagLSTTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN
Disordered region (IsUnstruct)
******************KWVIAGIAIRASL****************************************************************FF****LETVFK*******
Disordered Region (DISOPRED)
******************KWVIAGIAIRA************************************ARIPERLPCP*******************EFFTPPDLETVFKLHVE***
Disordered Region (DISEMBL)
**************SENKKWVIAGIAIRASLKPIK**************************TAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN
Disordered Region (DISPRO)
**************SENKKWVIAGIAIRASLKPIKTTK****************************RIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
255560904	110	conserved hypothetical protein [Ricinus	0.964	1.0	0.736	9e-39
224141267	106	predicted protein [Populus trichocarpa]	0.921	0.990	0.713	7e-35
225452346	103	PREDICTED: uncharacterized protein LOC10	0.903	1.0	0.666	8e-33
225470585	107	PREDICTED: uncharacterized protein LOC10	0.912	0.971	0.594	2e-27
449450076	100	PREDICTED: uncharacterized protein LOC10	0.868	0.99	0.603	9e-26
356567668	119	PREDICTED: uncharacterized protein LOC10	0.964	0.924	0.537	1e-24
357495737	111	hypothetical protein MTR_6g005250 [Medic	0.929	0.954	0.606	2e-24
21554811	112	unknown [Arabidopsis thaliana]	0.903	0.919	0.648	2e-24
15242711	112	uncharacterized protein [Arabidopsis tha	0.903	0.919	0.648	2e-24
297805638	112	hypothetical protein ARALYDRAFT_916192 [	0.885	0.901	0.619	5e-24

>gi|255560904|ref|XP_002521465.1| conserved hypothetical protein [Ricinus communis] gi|223539364|gb|EEF40955.1| conserved hypothetical protein [Ricinus communis]

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 93/114 (81%), Gaps = 4/114 (3%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTT 60
           MGFSKKSQ D GL+SE KKWVIAGIAIR SLKPI +T+ R      GD  D EE   STT
Sbjct: 1   MGFSKKSQVDSGLDSEGKKWVIAGIAIRTSLKPI-STRPRAKASENGD--DSEEEQCSTT 57

Query: 61  PTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN 114
           PTAKE+RIPERLPCPPAPRKRRPSRCN+N+G  REFF+PPDLE+VFK +VEKAN
Sbjct: 58  PTAKESRIPERLPCPPAPRKRRPSRCNYNSG-VREFFSPPDLESVFKCYVEKAN 110

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141267|ref|XP_002323996.1| predicted protein [Populus trichocarpa] gi|222866998|gb|EEF04129.1| predicted protein [Populus trichocarpa]

 Score =  150 bits (380), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 93/115 (80%), Gaps = 10/115 (8%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTT 60
           MGFSKK+Q D GL+SE KKWVIAGIAIR SLKP+  TK+R  ++ +GD E+      STT
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPV-NTKSRV-KDCDGDEEE-----FSTT 53

Query: 61  PTAKEARIPERLPCPPAPRKRRP-SRCNFNNGATREFFTPPDLETVFKLHVEKAN 114
           PTAKEARIPERLPCPPAPRKRRP SRCN++    REFFTPPDLETVFK +VEKAN
Sbjct: 54  PTAKEARIPERLPCPPAPRKRRPSSRCNYS--GVREFFTPPDLETVFKCYVEKAN 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452346|ref|XP_002274411.1| PREDICTED: uncharacterized protein LOC100268049 [Vitis vinifera] gi|147783376|emb|CAN59885.1| hypothetical protein VITISV_026167 [Vitis vinifera]

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 84/114 (73%), Gaps = 11/114 (9%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTT 60
           MGFS+K Q DG +ESE KKWVIAGI+IRA L+P+ T      RE E D E       STT
Sbjct: 1   MGFSEKPQVDGSIESEGKKWVIAGISIRAPLRPVSTKP----REKESDDE-----ACSTT 51

Query: 61  PTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKAN 114
           PT KEARIPERLPCPPAPRKRRPSRC+ N    REFFTPPDLE+VF  HVE+AN
Sbjct: 52  PTTKEARIPERLPCPPAPRKRRPSRCHLN--GVREFFTPPDLESVFIRHVERAN 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470585|ref|XP_002273869.1| PREDICTED: uncharacterized protein LOC100266480 [Vitis vinifera]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 83/116 (71%), Gaps = 12/116 (10%)

Query: 1   MG-FSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLST 59
           MG F++K Q DGGLESENKKWVI+GI +RA LKP+ T+     R+ EG+          +
Sbjct: 1   MGLFAEKLQVDGGLESENKKWVISGIQLRAPLKPVYTSPVGKERDEEGEE--------CS 52

Query: 60  TPTAKEARIPERLPCPPAPRKRRP-SRCNFNNGATREFFTPPDLETVFKLHVEKAN 114
           TPT +EARIP  L CPPAPRKR+P SRCN+N    REFFTPPDLETVF  HVE+A+
Sbjct: 53  TPTYEEARIPTTLTCPPAPRKRKPSSRCNYN--GVREFFTPPDLETVFIRHVERAS 106

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450076|ref|XP_004142790.1| PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus] gi|449483784|ref|XP_004156690.1| PREDICTED: uncharacterized LOC101222088 [Cucumis sativus]

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 77/111 (69%), Gaps = 12/111 (10%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKT-TKTRGGRESEGDYEDEEEAGLST 59
           MGFSKKSQ D G E E KKWVIAG++ R+SLKPI T +KT+ G E +GD           
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEG-EDDGD----------K 49

Query: 60  TPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHV 110
           TPT KEARIPE+L CPPAPRKRR  + + N    REFF PPDLE+VFKL V
Sbjct: 50  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567668|ref|XP_003552039.1| PREDICTED: uncharacterized protein LOC100790537 [Glycine max]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 11/121 (9%)

Query: 1   MGFSKKSQTDGGLESE----NKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAG 56
           MGFS+K+Q +G  +S+    N+KWVIAGIA+RA LKPI T      ++ E + ED     
Sbjct: 1   MGFSEKAQLEGAFDSDTNNNNRKWVIAGIALRAPLKPIYTIPMEKEQKEEVETED---CS 57

Query: 57  LSTTPTAKEARIPERLPCPPAPRKRRPS--RCNF--NNGATREFFTPPDLETVFKLHVEK 112
            STTPT  E++IP    CPPAPRKR+P+  +CN+    G  REFFTPPDLETVF  HVEK
Sbjct: 58  SSTTPTNVESKIPTPFTCPPAPRKRKPASKKCNYRRGGGVVREFFTPPDLETVFIRHVEK 117

Query: 113 A 113
           A
Sbjct: 118 A 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495737|ref|XP_003618157.1| hypothetical protein MTR_6g005250 [Medicago truncatula] gi|355493172|gb|AES74375.1| hypothetical protein MTR_6g005250 [Medicago truncatula]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 83/117 (70%), Gaps = 11/117 (9%)

Query: 1   MGFSK---KSQTDGGLESENKKWVIAGIAIRASLKPIKT-TKTRGGRESEGDYEDEEEAG 56
           MGFSK   K+Q +  LESE KKWVIAGI++R SLKPI T   T+ G  +  D EDEE   
Sbjct: 1   MGFSKNSKKTQIEKSLESEAKKWVIAGISLR-SLKPINTKMSTKNG--AVFDEEDEEN-- 55

Query: 57  LSTTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVFKLHVEKA 113
            STTPTAKEARIP  + CPPAPRK++ S+CN N    REFF  PDLETVFK+ VEK+
Sbjct: 56  -STTPTAKEARIPVNMSCPPAPRKKKVSKCN-NVVGGREFFKCPDLETVFKVRVEKS 110

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554811|gb|AAM63698.1| unknown [Arabidopsis thaliana]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 80/111 (72%), Gaps = 8/111 (7%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDY---EDEEEAGL 57
           MGFSKKSQ +GGLES+ KKWVIAGI+IRASLKP+K TK R   E   +       EE   
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVK-TKLRAPPEIVTEVEEDCYNEEEEC 59

Query: 58  STTPTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPP-DLETVF 106
           STTPTAKE +IPE L CPPAPRKRRP+ +C  N    REFFTPP DLETVF
Sbjct: 60  STTPTAKETKIPELLECPPAPRKRRPALKCRSN--VVREFFTPPSDLETVF 108

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242711|ref|NP_198862.1| uncharacterized protein [Arabidopsis thaliana] gi|88900376|gb|ABD57500.1| At5g40460 [Arabidopsis thaliana] gi|332007167|gb|AED94550.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 80/111 (72%), Gaps = 8/111 (7%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDY---EDEEEAGL 57
           MGFSKKSQ +GGLES+ KKWVIAGI+IRASLKP+K TK R   E   +       EE   
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVK-TKLRAPPEIVTEVEEDCYNEEEEC 59

Query: 58  STTPTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPP-DLETVF 106
           STTPTAKE +IPE L CPPAPRKRRP+ +C  N    REFFTPP DLETVF
Sbjct: 60  STTPTAKETKIPELLECPPAPRKRRPALKCRSN--VVREFFTPPSDLETVF 108

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805638|ref|XP_002870703.1| hypothetical protein ARALYDRAFT_916192 [Arabidopsis lyrata subsp. lyrata] gi|297316539|gb|EFH46962.1| hypothetical protein ARALYDRAFT_916192 [Arabidopsis lyrata subsp. lyrata]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 81/113 (71%), Gaps = 12/113 (10%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAG---L 57
           MG SKKSQ DGGL+S+ KKWVIAGI+I+ASLKP+KT K +   E E + E++        
Sbjct: 1   MGLSKKSQFDGGLDSDGKKWVIAGISIQASLKPVKT-KHKAPPEKEAEVEEDCYNEEEEC 59

Query: 58  STTPTAKEARIPERLPCPPAPRKRRPS---RCNFNNGATREFFTPP-DLETVF 106
           STTPTAKE +IPE L CPPAPRKRRP+   RCN    A  EFFTPP DLETVF
Sbjct: 60  STTPTAKETKIPEILECPPAPRKRRPALKCRCN----AVIEFFTPPSDLETVF 108

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
TAIR|locus:2155657	112	AT5G40460 "AT5G40460" [Arabido	0.912	0.928	0.609	5.7e-27
TAIR|locus:2196459	110	AT1G10690 [Arabidopsis thalian	0.868	0.9	0.450	1.3e-15
TAIR|locus:4515102692	106	AT1G60783 "AT1G60783" [Arabido	0.850	0.915	0.418	1.6e-13
TAIR|locus:2089169	99	AT3G27630 "AT3G27630" [Arabido	0.815	0.939	0.416	1.9e-12
TAIR|locus:5019474757	108	AT3G20898 "AT3G20898" [Arabido	0.403	0.425	0.5	2.9e-07
TAIR|locus:504956327	116	AT1G51355 "AT1G51355" [Arabido	0.456	0.448	0.388	1.5e-05
TAIR|locus:2185213	72	AT5G02220 [Arabidopsis thalian	0.412	0.652	0.416	0.00045

TAIR|locus:2155657 AT5G40460 "AT5G40460" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 67/110 (60%), Positives = 74/110 (67%)

Query:     1 MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTX--XXXXXXXXXXXXXXXXLS 58
             MGFSKKSQ +GGLES+ KKWVIAGI+IRASLKP+KT                       S
Sbjct:     1 MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query:    59 TTPTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPP-DLETVF 106
             TTPTAKE +IPE L CPPAPRKRRP+ +C  N    REFFTPP DLETVF
Sbjct:    61 TTPTAKETKIPELLECPPAPRKRRPALKCRSN--VVREFFTPPSDLETVF 108

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

GO:0009694 "jasmonic acid metabolic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

TAIR|locus:2196459 AT1G10690 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 50/111 (45%), Positives = 63/111 (56%)

Query:     1 MGFSKKS--QTDGGL-ES-ENKKWVIAGIAIRASLKPIKTTKTXXXXXXXXXXXXXXXXX 56
             MG+S K   Q DG + ES + KKWVIAGI  R+ LK I  +                   
Sbjct:     1 MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSP------GVTVTETEEQDQ 54

Query:    57 LSTTPTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPPDLETVF 106
               TTPTA   RIP   PCP AP+KR+PS +C++    TR++F+PPDLETVF
Sbjct:    55 CPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVT-VTRDYFSPPDLETVF 104

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:4515102692 AT1G60783 "AT1G60783" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 46/110 (41%), Positives = 61/110 (55%)

Query:     1 MGFSKKS--QTDGGLE--SENKKWVIAGIAIRASLKPIKTTKTXXXXXXXXXXXXXXXXX 56
             MGFS K+  Q D      +E KK VI GI++ +++KPI  + +                 
Sbjct:     1 MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDL------- 53

Query:    57 LSTTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVF 106
               TTPTA   RIP  +PCPPAP+KR+ +    + G  REFF+PPDLETVF
Sbjct:    54 CPTTPTADSVRIPTVIPCPPAPKKRKLT-LKVSYGP-REFFSPPDLETVF 101

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089169 AT3G27630 "AT3G27630" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 45/108 (41%), Positives = 57/108 (52%)

Query:     1 MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTXXXXXXXXXXXXXXXXXLSTT 60
             MG SKKSQ    L+++ KK++ A  +IRASLKP+KT                    +  T
Sbjct:     1 MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTK--------LIKPERESEDGICIT 52

Query:    61 PTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPP-DLETVF 106
             PTA+ A+ PE   CP APRKR P  +C   N    E+F PP D E VF
Sbjct:    53 PTARGAKTPE---CPAAPRKRPPVLKCQ--NNIRIEYFVPPSDFELVF 95

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:5019474757 AT3G20898 "AT3G20898" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query:    60 TPTAKEARIPERLPCPPAPRKRRPSR-CNFNNGATREFFTPPDLETVF 106
             TP AK++RIPE L CPPAP+K+R S+ C         FF PP++E  F
Sbjct:    56 TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQI-VFFAPPEIELFF 102

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956327 AT1G51355 "AT1G51355" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query:    62 TAKEARIPERLPCPPAPRKRRPSR-CNFNNGATREFFTPPDLETVFKLHVEKAN 114
             T +++RIPE L CPPAP+K++ ++ C         FF PPD+E  F   + + N
Sbjct:    62 TPEKSRIPEMLTCPPAPKKQKVAQNCALRRRQIA-FFAPPDVELFFVFALGQQN 114

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185213 AT5G02220 [Arabidopsis thaliana (taxid:3702)]

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 20/48 (41%), Positives = 25/48 (52%)

Query:    59 TTPTAKEARIPERLPCPPAPRKRRPSRCNFNNGATREFFTPPDLETVF 106
             TTP +   RIP    CPP PRK+        +     +F PPDLET+F
Sbjct:    16 TTPRSTMYRIPVASVCPPPPRKKLMV-VRKRDPPRNGYFQPPDLETLF 62


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      114        97   0.00091  102 3  11 23  0.42    30
                                                     29  0.44    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  535 (57 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.64u 0.23s 10.87t   Elapsed:  00:00:00
  Total cpu time:  10.64u 0.23s 10.87t   Elapsed:  00:00:00
  Start:  Sat May 11 01:55:17 2013   End:  Sat May 11 01:55:17 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	114
PLN03031	102	PLN03031, PLN03031, hypothetical protein; Provisio	9e-45

>gnl|CDD|215546 PLN03031, PLN03031, hypothetical protein; Provisional

 Score =  140 bits (354), Expect = 9e-45
 Identities = 77/107 (71%), Positives = 83/107 (77%), Gaps = 10/107 (9%)

Query: 1   MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTT 60
           MGFSKKSQ DGGLES+ KKWVIAGI+IRA LKPI T       +     EDEEE   STT
Sbjct: 1   MGFSKKSQVDGGLESDGKKWVIAGISIRAPLKPIST-------KPVAKEEDEEEDECSTT 53

Query: 61  PTAKEARIPERLPCPPAPRKRRPS-RCNFNNGATREFFTPPDLETVF 106
           PTAKEARIPERLPCPPAPRKR+PS +CN+N    REFFTPPDLETVF
Sbjct: 54  PTAKEARIPERLPCPPAPRKRKPSLKCNYN--GVREFFTPPDLETVF 98

Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
PLN03031	102	hypothetical protein; Provisional	100.0

>PLN03031 hypothetical protein; Provisional

Probab=100.00  E-value=3.6e-50  Score=287.47  Aligned_cols=101  Identities=75%  Similarity=1.200  Sum_probs=91.5

Q ss_pred             CCCCCcccccCCccCCCcceEEeccccccccCCeeecccCCCcCCCCCchhhhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q 036142            1 MGFSKKSQTDGGLESENKKWVIAGIAIRASLKPIKTTKTRGGRESEGDYEDEEEAGLSTTPTAKEARIPERLPCPPAPRK   80 (114)
Q Consensus         1 mg~s~k~q~~~~~~~~~kkwviagi~l~~~LkPi~t~~~~~~~~~e~~~~~~e~~~C~TTPts~~~rIP~~~~CPPAPRK   80 (114)
                      ||||+|+||||+||+||||||||||+||+|||||+|++.+.+.       ++|+++|.+|||+++|+||..++|||||||
T Consensus         1 mg~s~k~q~~~~~~~~~kkwviagi~~ra~LkPi~t~~~~~~~-------~ee~~~c~~TPts~~~rIP~~~~CPPAPrK   73 (102)
T PLN03031          1 MGFSKKSQVDGGLESDGKKWVIAGISIRAPLKPISTKPVAKEE-------DEEEDECSTTPTAKEARIPERLPCPPAPRK   73 (102)
T ss_pred             CCcCcccccccccccCCceEEEeccCcccccCceeccCCCccc-------cccccccccCCCCccccCCCCCcCCCCCCC
Confidence            9999999999999999999999999999999999999887543       556789955699999999999999999999


Q ss_pred             CCCC-CCCCCCCCCcCccCCCchHHHHhhhc
Q 036142           81 RRPS-RCNFNNGATREFFTPPDLETVFKLHV  110 (114)
Q Consensus        81 ~r~~-k~~~~~~~~~~FF~~PDLesvF~~~~  110 (114)
                      ++++ +|+++  ++++||++||||+||+.|+
T Consensus        74 ~r~~~kc~~~--p~~~FF~pPDLEsvFv~r~  102 (102)
T PLN03031         74 RKPSLKCNYN--GVREFFTPPDLETVFIQRA  102 (102)
T ss_pred             CCccccccCC--CCCCccCCCChhheeEecC
Confidence            9987 76664  6889999999999998764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00