Citrus Sinensis ID: 036179


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
LLQNSSEAAKSDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGSSATAPISPPNKKNGSSDGSGKKKTKESRTWIAIGATASSIIVLVLSSFLLWRIKRRKERVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFGP
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEccccccEEEEEEEccccccccHHHHHccccccEEEEcccEEEEEcccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccEEEEcccEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccccc
ccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEccccccccEEEEEEEEcccccHHHHHHHcccccEEEEEEccEEEEEccccHcccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccEcccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHcccccccEEEEccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHEEcHHHHHHHHccccHHcccccccccc
llqnsseaaksdsnyvyhfcppenntaagglfmYKVGALFRGKLYNEAGRYLYYNategvdpnkvygLYHCYFRlqsntivtnctgaKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMnvtdrykfsnivgqSFSDLIQNVtsrhsnskypaaaqtvNASSFVKLYTLVQcipylskpdcnvclpgalaqipaccsgkqggrvltpscniryerypffapisppnkkngssatapisppnkkngssdgsgkkktkesrTWIAIGATASSIIVLVLSSFLLWRIKRRKERVKGNVWHYKMVELPTTIrmtfyedrsiqatqhfsdenklgeggfgp
llqnsseaaksdsnyVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGssatapisppnkkngssdgsgkkktkesrTWIAIGATASSIIVLVLSSFLLWRikrrkervkgnvwhykmvelpttIRMTFYEDRSIQAtqhfsdenklgeggfgp
LLQNSSEAAKSDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGSSATAPISPPNkkngssdgsgkkktkESRTWIAIGATAssiivlvlssfllWRIKRRKERVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFGP
*************NYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVT*******YPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAP**************************************TWIAIGATASSIIVLVLSSFLLWRIKRRKERVKGNVWHYKMVELPTTIRMTFYEDRSI*******************
LLQNS**AAKSDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPI*************************************TWIAIGATASSIIVLVLSSFLLWRIKRRK***********MVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFG*
**********SDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPN********************************RTWIAIGATASSIIVLVLSSFLLWRIKRRKERVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFGP
LLQNSSEAAKSDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPI*********************************KESRTWIAIGATASSIIVLVLSSFLLWRIKRR**************ELPTTIRMTFYEDRSIQATQHFSDENKL*E*GFGP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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LLQNSSEAAKSDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYFRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGSSATAPISPPNKKNGSSDGSGKKKTKESRTWIAIGATASSIIVLVLSSFLLWRIKRRKERVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFGP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query339 2.2.26 [Sep-21-2011]
Q9M0X5 675 Cysteine-rich receptor-li yes no 0.938 0.471 0.301 1e-35
Q8H199 658 Cysteine-rich receptor-li no no 0.834 0.430 0.305 7e-29
Q9T0J1 665 Cysteine-rich receptor-li no no 0.817 0.416 0.315 2e-28
O49564 642 Cysteine-rich receptor-li no no 0.702 0.370 0.334 3e-25
Q5Q0E2324 Cysteine-rich repeat secr no no 0.607 0.635 0.296 1e-23
Q9ZP16 667 Cysteine-rich receptor-li no no 0.823 0.418 0.287 4e-23
Q9LRJ9252 Cysteine-rich repeat secr no no 0.598 0.805 0.296 5e-23
Q8GYA4 669 Cysteine-rich receptor-li no no 0.911 0.461 0.267 2e-22
O65405 683 Cysteine-rich receptor-li no no 0.923 0.458 0.268 2e-21
Q8S9L6 679 Cysteine-rich receptor-li no no 0.828 0.413 0.270 2e-20
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function desciption
 Score =  150 bits (379), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 27/345 (7%)

Query: 11  SDSNYVYHFCPPENNTAAGGLFMYKVGALFRGKLY-NEAGRYLYYNATEGV--DPNKVYG 67
           SD  Y+YH CP     +    ++  +  +       N A   L+ NA  G   D N+VYG
Sbjct: 25  SDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSLSSPNAAYASLFDNAAAGEENDSNRVYG 84

Query: 68  LYHCY-----------FRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTV 116
           ++ C                +N  +  C   K A++WYD+CMVR+SN S    +   P V
Sbjct: 85  VFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWYDECMVRYSNQSIVGQMRIRPGV 144

Query: 117 YAWNIMNVTDRY--KFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQ 174
           +  N  N+T+    +F+    +S   L+ +V  + + S    A +  N + F  +Y+LVQ
Sbjct: 145 FLTNKQNITENQVSRFN----ESLPALLIDVAVKAALSSRKFATEKANFTVFQTIYSLVQ 200

Query: 175 CIPYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFF-APISPPNKKNG 233
           C P L+  DC  CL   +  +P CC    GGRV+ PSC+ RYE YPF+   I+       
Sbjct: 201 CTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYELYPFYNETIAAAPMAPP 260

Query: 234 SSATAPISPPNKKNGSSDGSGKKKTKESRTWIAIGATASSIIVLVLSSFLLWRIKRRKER 293
            S+T    P N    S  G GK  T      +   A   S+ VL+L +      +RR  +
Sbjct: 261 PSSTVTAPPLNIP--SEKGKGKNLT----VIVTAIAVPVSVCVLLLGAMCWLLARRRNNK 314

Query: 294 VKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFG 338
           +           + +T  + F       AT  FS+ NKLG GGFG
Sbjct: 315 LSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFG 359





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|Q8H199|CRK14_ARATH Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2 Back     alignment and function description
>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1 Back     alignment and function description
>sp|O49564|CRK27_ARATH Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=3 SV=2 Back     alignment and function description
>sp|Q5Q0E2|CRR9_ARATH Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZP16|CRK11_ARATH Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2 Back     alignment and function description
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function description
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function description
>sp|O65405|CRK28_ARATH Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=3 SV=2 Back     alignment and function description
>sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
359477817 670 PREDICTED: cysteine-rich receptor-like p 0.873 0.441 0.359 3e-45
147776074 815 hypothetical protein VITISV_005300 [Viti 0.817 0.339 0.356 3e-42
358347848 671 Cysteine-rich receptor-like protein kina 0.923 0.466 0.335 6e-42
358347946 552 Cysteine-rich receptor-like protein kina 0.923 0.567 0.335 7e-42
255555021 686 ATP binding protein, putative [Ricinus c 0.970 0.479 0.321 3e-41
359474717 663 PREDICTED: cysteine-rich receptor-like p 0.923 0.472 0.339 4e-41
255555035 671 ATP binding protein, putative [Ricinus c 0.929 0.469 0.327 3e-40
357444315 562 Cysteine-rich receptor-like protein kina 0.911 0.549 0.334 1e-39
357444313 801 Cysteine-rich receptor-like protein kina 0.914 0.387 0.332 1e-39
357444317 673 Cysteine-rich receptor-like protein kina 0.914 0.460 0.332 1e-39
>gi|359477817|ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 177/367 (48%), Gaps = 71/367 (19%)

Query: 15  YVYHFCPPENNTAAGGL-FMYKVGALFRGKLYNEAGRYLYYNATEGVDPNKVYGLYHCYF 73
           ++Y FC   NN+ AG   F   +GAL    L NE G   +    EG DP+KVYGL+ C  
Sbjct: 30  FLYTFC--NNNSHAGSTKFQSNLGALLSRSLNNEGGISSFSMVYEGEDPDKVYGLFLCRP 87

Query: 74  RLQSNT-----------IVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTVYAWNIM 122
            +  +            IV  C   KEAI+WY++C +R+SN SF  +LE  PT+Y WN  
Sbjct: 88  DVSKHICQSCIDAATLKIVQVCQHKKEAIIWYNECFLRYSNRSFFSNLEMKPTLYMWNTQ 147

Query: 123 NVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKP 182
           N +   KF   +G+ F    QN+T++ ++S    A   V  S+F+ LY +VQC   L   
Sbjct: 148 NASAPDKFDQKLGEMF----QNLTAQATSSDDMYAIGQVEVSNFLNLYGIVQCTRDLRMS 203

Query: 183 DCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGSSATAPISP 242
            C  CL   +  IP    GKQGGRVL PSC IRYE YPF A   P  +   +   + ISP
Sbjct: 204 YCRRCLDEVVGYIPNFMEGKQGGRVLAPSCYIRYEVYPFAAVEDPVVE---AQVPSSISP 260

Query: 243 PNKKNGSSDGSGKKKTKESRTWIAIGATASSIIVLVLSSFLLWRIKRRK----------- 291
             +K         +KTK    WIA G + S I+V+    +  + I+RRK           
Sbjct: 261 RGRKG--------RKTK----WIATGTSLSGIVVVAFCVY--YVIRRRKGADPEEKESKG 306

Query: 292 -------------------ERVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKL 332
                              E ++G++   K  E P       YE     ATQHFS++NKL
Sbjct: 307 DLCLLDLGGGRLDAEDYSSETLQGDMLA-KSKEFPVIGFDIVYE-----ATQHFSNDNKL 360

Query: 333 GEGGFGP 339
           GEGGFGP
Sbjct: 361 GEGGFGP 367




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776074|emb|CAN65425.1| hypothetical protein VITISV_005300 [Vitis vinifera] Back     alignment and taxonomy information
>gi|358347848|ref|XP_003637963.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355503898|gb|AES85101.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|358347946|ref|XP_003638011.1| Cysteine-rich receptor-like protein kinase, partial [Medicago truncatula] gi|355503946|gb|AES85149.1| Cysteine-rich receptor-like protein kinase, partial [Medicago truncatula] Back     alignment and taxonomy information
>gi|255555021|ref|XP_002518548.1| ATP binding protein, putative [Ricinus communis] gi|223542393|gb|EEF43935.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357444315|ref|XP_003592435.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481483|gb|AES62686.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357444313|ref|XP_003592434.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481482|gb|AES62685.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.935 0.469 0.283 6.5e-33
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.687 0.348 0.288 1.2e-26
TAIR|locus:2031341324 AT1G63550 [Arabidopsis thalian 0.681 0.712 0.308 3.2e-26
TAIR|locus:2141762 665 CRK26 "cysteine-rich RLK (RECE 0.740 0.377 0.312 4.4e-26
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.616 0.829 0.305 5.9e-25
TAIR|locus:2123111 669 CRK34 "cysteine-rich RLK (RECE 0.489 0.248 0.309 2.8e-23
TAIR|locus:2121626 830 CRK23 "cysteine-rich RLK (RECE 0.663 0.271 0.286 4.5e-23
TAIR|locus:2127323 642 CRK27 "cysteine-rich RLK (RECE 0.702 0.370 0.304 2.5e-22
TAIR|locus:2031311284 AT1G63570 "AT1G63570" [Arabido 0.690 0.823 0.268 2.6e-22
TAIR|locus:2155130287 AT5G41290 [Arabidopsis thalian 0.648 0.766 0.287 4.9e-21
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 366 (133.9 bits), Expect = 6.5e-33, P = 6.5e-33
 Identities = 98/346 (28%), Positives = 147/346 (42%)

Query:    11 SDSNYVYHFCPPENNTAAGGLFMYKVGALFRG-KLYNEAGRYLYYNATEGV--DPNKVYG 67
             SD  Y+YH CP     +    ++  +  +       N A   L+ NA  G   D N+VYG
Sbjct:    25 SDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSLSSPNAAYASLFDNAAAGEENDSNRVYG 84

Query:    68 LYHCY-----------FRLQSNTIVTNCTGAKEAIVWYDQCMVRFSNSSFALSLETAPTV 116
             ++ C                +N  +  C   K A++WYD+CMVR+SN S    +   P V
Sbjct:    85 VFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWYDECMVRYSNQSIVGQMRIRPGV 144

Query:   117 YAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCI 176
             +  N  N+T+  + S    +S   L+ +V  + + S    A +  N + F  +Y+LVQC 
Sbjct:   145 FLTNKQNITEN-QVSRF-NESLPALLIDVAVKAALSSRKFATEKANFTVFQTIYSLVQCT 202

Query:   177 PYLSKPDCNVCLPGALAQIPACCSGKQGGRVLTPSCNIRYERYPFFAPISPPNKKNGSSA 236
             P L+  DC  CL   +  +P CC    GGRV+ PSC+ RYE YPF+         N + A
Sbjct:   203 PDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYELYPFY---------NETIA 253

Query:   237 TAPISPPNXXXXXX---XXXXXXXXXESRTWIAIGATAXXXXXXXXXXXXXWRI-KRRKE 292
              AP++PP                   ++ T I                   W + +RR  
Sbjct:   254 AAPMAPPPSSTVTAPPLNIPSEKGKGKNLTVIVTAIAVPVSVCVLLLGAMCWLLARRRNN 313

Query:   293 RVKGNVWHYKMVELPTTIRMTFYEDRSIQATQHFSDENKLGEGGFG 338
             ++           + +T  + F       AT  FS+ NKLG GGFG
Sbjct:   314 KLSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFG 359




GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0006826 "iron ion transport" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127323 CRK27 "cysteine-rich RLK (RECEPTOR-like protein kinase) 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155130 AT5G41290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00020409001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (654 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 5e-16
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 7e-12
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 72.5 bits (178), Expect = 5e-16
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query: 136 QSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQI 195
            + + L+ +++S  ++S     A   + ++   +Y L QC   LS  DC  CL  A++++
Sbjct: 21  SNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSEL 80

Query: 196 PACCSGKQGGRVLTPSCNIRYERYPF 221
             CC  K+GGR+   SC +RYE YPF
Sbjct: 81  RRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 339
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.9
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.86
KOG1187 361 consensus Serine/threonine protein kinase [Signal 96.99
PF0869340 SKG6: Transmembrane alpha-helix domain; InterPro: 94.31
PLN00113 968 leucine-rich repeat receptor-like protein kinase; 93.63
KOG3653 534 consensus Transforming growth factor beta/activin 93.0
PF04478154 Mid2: Mid2 like cell wall stress sensor; InterPro: 91.31
PF06697278 DUF1191: Protein of unknown function (DUF1191); In 88.26
PTZ0038296 Variant-specific surface protein (VSP); Provisiona 82.09
PF15102146 TMEM154: TMEM154 protein family 80.26
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.90  E-value=7.1e-24  Score=168.02  Aligned_cols=101  Identities=38%  Similarity=0.663  Sum_probs=76.4

Q ss_pred             EEEe---eccc-CChhHHHHHHHHHHHHHHHHhhcCCcCCCCcccccccccCCcceEEEEeeccCCCChhhHhhHHHHHH
Q 036179          117 YAWN---IMNV-TDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGAL  192 (339)
Q Consensus       117 ~~~n---~~~~-~~~~~f~~~l~~ll~~l~~~a~~~~s~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~  192 (339)
                      ..|+   .+++ +++..|+.++..||..|+..++.. +..+|+  +++.+ .+.++||||+||++||++++|+.||+.++
T Consensus         2 ~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~-~~~~f~--~~~~~-~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~   77 (106)
T PF01657_consen    2 HFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASS-SSKGFA--TGSAG-SGPDTVYGLAQCRGDLSPSDCRACLADAV   77 (106)
T ss_dssp             --E---SSB----TT-THHHHHHHHHHHHHHHGGGT-T-TEEE--EEE---ST---EEEEEEE-TTS-HHHHHHHHHHHH
T ss_pred             CcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhc-cccCcE--EeecC-CCCCeEEEEEEcCCCCChhhhHHHHHHHH
Confidence            4555   3444 456669999999999999998742 246899  88764 47789999999999999999999999999


Q ss_pred             hhccccCCCCccEEEECcceeeeeecCCC
Q 036179          193 AQIPACCSGKQGGRVLTPSCNIRYERYPF  221 (339)
Q Consensus       193 ~~i~~~c~~~~g~~v~~~~C~lRy~~~~F  221 (339)
                      .+|+.+|++++||+|++++|+||||+++|
T Consensus        78 ~~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   78 ANISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             CCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] Back     alignment and domain information
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] Back     alignment and domain information
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region Back     alignment and domain information
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function Back     alignment and domain information
>PTZ00382 Variant-specific surface protein (VSP); Provisional Back     alignment and domain information
>PF15102 TMEM154: TMEM154 protein family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 7e-21
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 9e-15
3uim_A 326 Brassinosteroid insensitive 1-associated receptor; 2e-04
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query339
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.93
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.93
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.92
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.91
2ks1_B44 Epidermal growth factor receptor; ERBB1, ERBB2, tr 88.58
2l2t_A44 Receptor tyrosine-protein kinase ERBB-4; transmemb 87.31
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.93  E-value=4.2e-26  Score=179.92  Aligned_cols=103  Identities=25%  Similarity=0.435  Sum_probs=92.2

Q ss_pred             eEEEEeecccCChhHHHHHHHHHHHHHHHHhhcCCcCCCCcccccccccCCcceEEEEeeccCCCChhhHhhHHHHHHhh
Q 036179          115 TVYAWNIMNVTDRYKFSNIVGQSFSDLIQNVTSRHSNSKYPAAAQTVNASSFVKLYTLVQCIPYLSKPDCNVCLPGALAQ  194 (339)
Q Consensus       115 ~~~~~n~~~~~~~~~f~~~l~~ll~~l~~~a~~~~s~~~fa~~~~~~~~~~~~~vYglaQC~~Dls~~~C~~CL~~a~~~  194 (339)
                      .+..||.++++.++.|+.+|+.||..|+.+++.  +..+|+  ++..+..+.++||||+||++||++++|+.||+.++.+
T Consensus         6 v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~--s~~~~~--t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~   81 (108)
T 3a2e_A            6 VSSACNTQKIPSGSPFNRNLRAMLADLRQNTAF--SGYDYK--TSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNR   81 (108)
T ss_dssp             EEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGG--TTSEEE--EEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred             eeeecCCCccCCCChHHHHHHHHHHHHHhhCcc--ccCCce--EeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456789889999999999999999999998864  345677  6665545668999999999999999999999999999


Q ss_pred             ccccCCCCccEEEECcceeeeeecCCC
Q 036179          195 IPACCSGKQGGRVLTPSCNIRYERYPF  221 (339)
Q Consensus       195 i~~~c~~~~g~~v~~~~C~lRy~~~~F  221 (339)
                      |+++|++++||+||+++|+||||+++|
T Consensus        82 ~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           82 IFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            999999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} Back     alignment and structure
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00