Citrus Sinensis ID: 036182

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEcccccEEHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
matvktkvktgpaqaSMQKMSARVLFYSLLLTLQYgvqpliskrcirreVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Flexible Loop (DISEMBL)
matvktkvktgpaqasmQKMSARVLFYSLLLTLQYGVqpliskrcirREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Low Complexity Region (SEG)
MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Disordered region (IsUnstruct)
*********************ARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYII*
Disordered Region (DISOPRED)
************************LFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Disordered Region (DISEMBL)
*****************QKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Disordered Region (DISPRO)
******************KMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q8LES0	325	CMP-sialic acid transport	yes	no	0.833	0.353	0.730	2e-43
Q93890	368	UDP-galactose/UDP-N-acety	no	no	0.753	0.282	0.304	0.0001
Q6YC49	326	UDP-N-acetylglucosamine t	yes	no	0.818	0.346	0.285	0.0005
Q6AXR5	326	UDP-N-acetylglucosamine t	yes	no	0.818	0.346	0.285	0.0006
O77592	326	UDP-N-acetylglucosamine t	yes	no	0.724	0.306	0.299	0.0008
Q9Y2D2	325	UDP-N-acetylglucosamine t	yes	no	0.818	0.347	0.285	0.0008

>sp|Q8LES0|CSTR5_ARATH CMP-sialic acid transporter 5 OS=Arabidopsis thaliana GN=At5g65000 PE=2 SV=1

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 97/115 (84%)

Query: 10  TGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALI 69
           T     S   M  +VLFYS+LLTLQYG QPLISKRCIR++VIVT+SVLTCE+ KVI ALI
Sbjct: 3   TANGAKSPSSMGPKVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALI 62

Query: 70  FMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQ 124
            MA+ G+LK L+ +WTL+GSLTASGLPA IYALQNSLLQISYR+LDSLTFS+LNQ
Sbjct: 63  LMARNGSLKGLAKEWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQ 117

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
Arabidopsis thaliana (taxid: 3702)

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 21/125 (16%)

Query: 29  LLLTLQYGVQPLISKRCIRREV----IVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQW 84
           + LTLQ  +  L+ +    REV    + T +V   E+ K    L  +A+E T ++     
Sbjct: 47  IWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFICLFLVAQEETPRRF---- 102

Query: 85  TLVGSLTASGL-----------PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALF 133
             + +L    L           PA IY +QN+L  ++  +LD+ TF + +Q KI   A+F
Sbjct: 103 --IHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIF 160

Query: 134 TYIIL 138
           T IIL
Sbjct: 161 TVIIL 165

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 20/133 (15%)

Query: 15  ASMQKMSARVLFY---SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFAL 68
           A+++ +S  +L +   SL+LT++Y        R ++ E    + +T+V+  EL K++  +
Sbjct: 3   ANLKYLSLGILVFQTTSLVLTMRY-------SRTLKEEGPRYLSSTAVVVAELLKIMACI 55

Query: 69  IFMAKEG-----TLKKLSSQWTLVGSLTASGL--PATIYALQNSLLQISYRNLDSLTFSM 121
           + + K+       L ++     L   +    L  P+ IY LQN+LL ++  NLD+ T+ +
Sbjct: 56  LLVYKDSKCSLRALNRILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQV 115

Query: 122 LNQTKIIFTALFT 134
             Q KI+ TALF+
Sbjct: 116 TYQLKILTTALFS 128

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Bos taurus (taxid: 9913)

>sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 20/133 (15%)

Query: 15  ASMQKMSARVLFY---SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFAL 68
           A+++ +S  +L +   SL+LT++Y        R ++ E    + +T+V+  E  K++  +
Sbjct: 3   ANLKYLSLGILVFQTTSLVLTMRY-------SRTLKEEGPRYLSSTAVVVAEFLKIMACI 55

Query: 69  IFMAKEG-----TLKKLSSQWTLVGSLTASGL--PATIYALQNSLLQISYRNLDSLTFSM 121
             + K+      TL ++     L   +    L  P+ IY LQN+LL ++  NLD+ T+ +
Sbjct: 56  FLVYKDSKCSVRTLNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQV 115

Query: 122 LNQTKIIFTALFT 134
             Q KI+ TALF+
Sbjct: 116 TYQLKILTTALFS 128

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Rattus norvegicus (taxid: 10116)

>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 17/117 (14%)

Query: 28  SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEG-----TLKK 79
           SL+LT++Y        R ++ E    + +T+V+  EL K++  ++ + K+       L +
Sbjct: 19  SLVLTMRY-------SRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNR 71

Query: 80  LSSQWTLVGSLTASGL--PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFT 134
           +     L   +    L  P+ IY LQN+LL ++  NLD+ T+ +  Q KI+ TALF+
Sbjct: 72  ILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFS 128

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Canis familiaris (taxid: 9615)

>sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 20/133 (15%)

Query: 15  ASMQKMSARVLFY---SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFAL 68
           A+++ +S  +L +   SL+LT++Y        R ++ E    + +T+V+  EL K++  +
Sbjct: 3   ANLKYVSLGILVFQTTSLVLTMRY-------SRTLKEEGPRYLSSTAVVVAELLKIMACI 55

Query: 69  IFMAKEG-----TLKKLSSQWTLVGSLTASGL--PATIYALQNSLLQISYRNLDSLTFSM 121
           + + K+       L ++     L   +    L  P+ IY LQN+LL ++  NLD+ T+ +
Sbjct: 56  LLVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQV 115

Query: 122 LNQTKIIFTALFT 134
             Q KI+ TALF+
Sbjct: 116 TYQLKILTTALFS 128

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
224096177	327	predicted protein [Populus trichocarpa]	0.963	0.406	0.740	9e-49
356525475	327	PREDICTED: UDP-N-acetylglucosamine trans	0.920	0.388	0.757	9e-48
147784232	480	hypothetical protein VITISV_012657 [Viti	0.971	0.279	0.746	1e-47
255580874	326	UDP-N-acetylglucosamine transporter, put	0.876	0.371	0.809	2e-47
359497266	327	PREDICTED: UDP-N-acetylglucosamine trans	0.971	0.409	0.746	3e-47
224083690	327	predicted protein [Populus trichocarpa]	0.963	0.406	0.719	4e-47
255644839	208	unknown [Glycine max]	0.920	0.610	0.75	1e-46
449451433	331	PREDICTED: CMP-sialic acid transporter 5	1.0	0.416	0.659	1e-43
18424900	325	Nucleotide-sugar transporter family prot	0.833	0.353	0.730	1e-41
42573798	260	Nucleotide-sugar transporter family prot	0.833	0.442	0.730	2e-41

>gi|224096177|ref|XP_002310563.1| predicted protein [Populus trichocarpa] gi|222853466|gb|EEE91013.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 2/135 (1%)

Query: 4   VKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAK 63
           V TK+K G  +  +++ + RV  YS+LLTLQYG QPLISKR  RREVIVTTSVLTCELAK
Sbjct: 2   VTTKLKGGTTR--LERTNPRVWLYSVLLTLQYGAQPLISKRFTRREVIVTTSVLTCELAK 59

Query: 64  VIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLN 123
           V+ AL+ M ++G+LKK+ SQWTLVGSLTASGLPA IYALQNSLLQISY+NLDSLTFS+LN
Sbjct: 60  VVCALVLMVRDGSLKKMFSQWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSILN 119

Query: 124 QTKIIFTALFTYIIL 138
           QTKIIFTA FTYI+L
Sbjct: 120 QTKIIFTAFFTYIML 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525475|ref|XP_003531350.1| PREDICTED: UDP-N-acetylglucosamine transporter-like [Glycine max]

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 97/128 (75%), Positives = 110/128 (85%), Gaps = 1/128 (0%)

Query: 12  PAQASMQKMS-ARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIF 70
           P  +  Q M+ AR+ F+S+LL LQYG QPLISKR IRREVIVT+SVLTCELAKVI A+ F
Sbjct: 7   PKSSQGQVMNNARIHFFSILLALQYGAQPLISKRFIRREVIVTSSVLTCELAKVICAVFF 66

Query: 71  MAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFT 130
           MAK+G+L+KL  +WTLVG+LTASGLPA IYALQNSLLQISY+NLDSLTFSMLNQTKI FT
Sbjct: 67  MAKDGSLRKLYKEWTLVGALTASGLPAAIYALQNSLLQISYKNLDSLTFSMLNQTKIFFT 126

Query: 131 ALFTYIIL 138
           ALF Y IL
Sbjct: 127 ALFAYFIL 134

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784232|emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/138 (74%), Positives = 113/138 (81%), Gaps = 4/138 (2%)

Query: 1   MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCE 60
           MAT K  V T    A  +K S RV  Y +LLTLQYG QPLISKR IRREVIVT+SVLTCE
Sbjct: 1   MATKKRGVPT----AIPEKASPRVWLYLVLLTLQYGAQPLISKRFIRREVIVTSSVLTCE 56

Query: 61  LAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFS 120
           +AKVI AL  +A+ G LKKL ++WTLVGSLTASGLPA IYALQNSLLQISY+NLDSLTFS
Sbjct: 57  VAKVICALFLIARGGGLKKLYNEWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFS 116

Query: 121 MLNQTKIIFTALFTYIIL 138
           MLNQTK+ FTALFTYIIL
Sbjct: 117 MLNQTKLFFTALFTYIIL 134

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580874|ref|XP_002531256.1| UDP-N-acetylglucosamine transporter, putative [Ricinus communis] gi|223529141|gb|EEF31120.1| UDP-N-acetylglucosamine transporter, putative [Ricinus communis]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 104/121 (85%)

Query: 18  QKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTL 77
             M+ARV FYS+LL  QYG QPLISK    REVIVTT VLTCE+AKVI ALI MA++GTL
Sbjct: 13  DGMNARVWFYSMLLAFQYGAQPLISKCFTGREVIVTTLVLTCEIAKVICALILMARDGTL 72

Query: 78  KKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYII 137
           KKL  +WTLVGSLTASGLPA IYALQNSLLQISYRNLDSLTFSMLNQTKI FTALFTYII
Sbjct: 73  KKLYGEWTLVGSLTASGLPAAIYALQNSLLQISYRNLDSLTFSMLNQTKIFFTALFTYII 132

Query: 138 L 138
           L
Sbjct: 133 L 133

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497266|ref|XP_002268717.2| PREDICTED: UDP-N-acetylglucosamine transporter-like [Vitis vinifera] gi|296084745|emb|CBI25889.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/138 (74%), Positives = 113/138 (81%), Gaps = 4/138 (2%)

Query: 1   MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCE 60
           MAT K  V T    A  +K S RV  Y +LLTLQYG QPLISKR IRREVIVT+SVLTCE
Sbjct: 1   MATKKRGVPT----AIPEKASPRVWLYLVLLTLQYGAQPLISKRFIRREVIVTSSVLTCE 56

Query: 61  LAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFS 120
           +AKVI AL  +A+ G LKKL ++WTLVGSLTASGLPA IYALQNSLLQISY+NLDSLTFS
Sbjct: 57  VAKVICALFLIARGGGLKKLYNEWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFS 116

Query: 121 MLNQTKIIFTALFTYIIL 138
           MLNQTK+ FTALFTYIIL
Sbjct: 117 MLNQTKLFFTALFTYIIL 134

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083690|ref|XP_002307086.1| predicted protein [Populus trichocarpa] gi|222856535|gb|EEE94082.1| predicted protein [Populus trichocarpa]

 Score =  192 bits (488), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 114/139 (82%), Gaps = 6/139 (4%)

Query: 1   MATVKTKVK-TGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTC 59
           MAT K K   +GP     ++ + RV  YS+LLTLQYG QPLISKR   REVIVTTSVLTC
Sbjct: 1   MATTKRKGGASGP-----ERTNPRVWLYSILLTLQYGAQPLISKRFTGREVIVTTSVLTC 55

Query: 60  ELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTF 119
           E+AKV+ ALI M ++G+LKK+ SQWTLVGSLTASGLPA IYALQNSLLQISY+NLDSLTF
Sbjct: 56  EVAKVVCALILMVRDGSLKKVFSQWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTF 115

Query: 120 SMLNQTKIIFTALFTYIIL 138
           S+LNQTK+ FTA FTYIIL
Sbjct: 116 SILNQTKVFFTAFFTYIIL 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644839|gb|ACU22920.1| unknown [Glycine max]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/128 (75%), Positives = 108/128 (84%), Gaps = 1/128 (0%)

Query: 12  PAQASMQKMS-ARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIF 70
           P  +  Q M+ AR+ F+S+LL LQYG QPLISKR IRREVIVT+SVLTCELAKVI A+ F
Sbjct: 7   PKSSQGQVMNNARIHFFSILLALQYGAQPLISKRFIRREVIVTSSVLTCELAKVICAVFF 66

Query: 71  MAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFT 130
           MAK+G+L+KL  +WTLVG  TASGLPA IYALQNSLLQISY+NLDSLTFSMLNQTKI FT
Sbjct: 67  MAKDGSLRKLYKEWTLVGVSTASGLPAAIYALQNSLLQISYKNLDSLTFSMLNQTKIFFT 126

Query: 131 ALFTYIIL 138
           ALF Y IL
Sbjct: 127 ALFAYFIL 134

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451433|ref|XP_004143466.1| PREDICTED: CMP-sialic acid transporter 5-like [Cucumis sativus] gi|449504815|ref|XP_004162302.1| PREDICTED: CMP-sialic acid transporter 5-like [Cucumis sativus]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 108/138 (78%)

Query: 1   MATVKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCE 60
           M +V  K +   A     +M+  +L YS+LL LQYG QPLISKR  RREVIVT+SVLTCE
Sbjct: 1   MPSVAPKKRPKDAATRADQMNRGILLYSILLALQYGAQPLISKRFTRREVIVTSSVLTCE 60

Query: 61  LAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFS 120
           + KV+ AL  M KEG+LKK  S+WT+ G+LTASGLPA IYALQNSLLQISY+NLDSLTFS
Sbjct: 61  IVKVVCALAIMVKEGSLKKTFSEWTVAGALTASGLPAIIYALQNSLLQISYKNLDSLTFS 120

Query: 121 MLNQTKIIFTALFTYIIL 138
           MLNQTKI+FTA+ TY +L
Sbjct: 121 MLNQTKILFTAVCTYFLL 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424900|ref|NP_569004.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|75155718|sp|Q8LES0.1|CSTR5_ARATH RecName: Full=CMP-sialic acid transporter 5; Short=CMP-SA-Tr 5; Short=CMP-Sia-Tr 5 gi|21553407|gb|AAM62500.1| unknown [Arabidopsis thaliana] gi|110742240|dbj|BAE99046.1| hypothetical protein [Arabidopsis thaliana] gi|124300990|gb|ABN04747.1| At5g65000 [Arabidopsis thaliana] gi|332010598|gb|AED97981.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 97/115 (84%)

Query: 10  TGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALI 69
           T     S   M  +VLFYS+LLTLQYG QPLISKRCIR++VIVT+SVLTCE+ KVI ALI
Sbjct: 3   TANGAKSPSSMGPKVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALI 62

Query: 70  FMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQ 124
            MA+ G+LK L+ +WTL+GSLTASGLPA IYALQNSLLQISYR+LDSLTFS+LNQ
Sbjct: 63  LMARNGSLKGLAKEWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQ 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42573798|ref|NP_974995.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|117958791|gb|ABK59694.1| At5g65000 [Arabidopsis thaliana] gi|332010599|gb|AED97982.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 97/115 (84%)

Query: 10  TGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALI 69
           T     S   M  +VLFYS+LLTLQYG QPLISKRCIR++VIVT+SVLTCE+ KVI ALI
Sbjct: 3   TANGAKSPSSMGPKVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALI 62

Query: 70  FMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQ 124
            MA+ G+LK L+ +WTL+GSLTASGLPA IYALQNSLLQISYR+LDSLTFS+LNQ
Sbjct: 63  LMARNGSLKGLAKEWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQ 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
TAIR|locus:2177674	325	AT5G65000 [Arabidopsis thalian	0.934	0.396	0.736	4.4e-45
WB|WBGene00018414	351	nstp-8 [Caenorhabditis elegans	0.963	0.378	0.330	1.5e-10
WB|WBGene00019451	312	nstp-7 [Caenorhabditis elegans	0.840	0.371	0.314	8.5e-09
WB|WBGene00022577	344	nstp-3 [Caenorhabditis elegans	0.818	0.328	0.325	2.2e-07
ZFIN|ZDB-GENE-050417-460	364	zgc:110602 "zgc:110602" [Danio	0.934	0.354	0.295	2.4e-07
WB|WBGene00015038	383	nstp-6 [Caenorhabditis elegans	0.826	0.297	0.283	4.4e-07
WB|WBGene00005153	368	srf-3 [Caenorhabditis elegans	0.869	0.326	0.310	5.3e-07
UNIPROTKB|Q93890	368	srf-3 "UDP-galactose/UDP-N-ace	0.869	0.326	0.310	5.3e-07
UNIPROTKB|Q9BSB7	220	SLC35A3 "Solute carrier family	0.847	0.531	0.277	5.4e-07
UNIPROTKB|G5EFD3	328	srf-3 "Protein SRF-3, isoform	0.782	0.329	0.324	5.4e-07

TAIR|locus:2177674 AT5G65000 [Arabidopsis thaliana (taxid:3702)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 95/129 (73%), Positives = 109/129 (84%)

Query:    10 TGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALI 69
             T     S   M  +VLFYS+LLTLQYG QPLISKRCIR++VIVT+SVLTCE+ KVI ALI
Sbjct:     3 TANGAKSPSSMGPKVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALI 62

Query:    70 FMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIF 129
              MA+ G+LK L+ +WTL+GSLTASGLPA IYALQNSLLQISYR+LDSLTFS+LNQTKI F
Sbjct:    63 LMARNGSLKGLAKEWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQTKIFF 122

Query:   130 TALFTYIIL 138
             TA FT+IIL
Sbjct:   123 TAFFTFIIL 131

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0010584 "pollen exine formation" evidence=IMP

WB|WBGene00018414 nstp-8 [Caenorhabditis elegans (taxid:6239)]

 Score = 154 (59.3 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 47/142 (33%), Positives = 75/142 (52%)

Query:     4 VKTKVKTGPAQASMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAK 63
             +  KVK+  + + +Q + +  L   + +T  +   P   +       + TTSV   E+ K
Sbjct:    13 IDKKVKSS-SSSIIQGLCSIQLLSMIAVTAHHTAMPFFVQMANTSHFLPTTSVFMMEVLK 71

Query:    64 VIFALI---FMAK--EGTLKKLSSQ-W-TLVGSLTASGLPATIYALQNSLLQISYRNLDS 116
             ++F LI   F  K  E T KKL    W   V +L  S +PA +YA+QN+L  I+  N+D+
Sbjct:    72 LLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLKVS-VPAVVYAIQNNLYYIALANIDA 130

Query:   117 LTFSMLNQTKIIFTALFTYIIL 138
              T+S+  Q +I+ TAL + IIL
Sbjct:   131 TTYSVTVQLRILTTALLSVIIL 152

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

WB|WBGene00019451 nstp-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 137 (53.3 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 40/127 (31%), Positives = 63/127 (49%)

Query:    23 RVLFYSLLL-----TLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEG-- 75
             RVLF   LL     T  +   P + K   +   + TTSV   E+ K+ F LI +  E   
Sbjct:    28 RVLFSVQLLSMIAVTTHHTAMPFLVKIANKSHFLPTTSVFMMEILKLSFCLIIVLIETRS 87

Query:    76 ---TLKKLSSQ-WTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTA 131
                T KKL    W          +PA +YA+QN+L  ++  N+D+ T+S+  Q +I+ TA
Sbjct:    88 IRKTAKKLHKNIWQNWWETMKVSVPALVYAVQNNLYYVALANIDATTYSVTLQLRILTTA 147

Query:   132 LFTYIIL 138
             + + ++L
Sbjct:   148 ILSVVLL 154

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

WB|WBGene00022577 nstp-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 125 (49.1 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 40/123 (32%), Positives = 62/123 (50%)

Query:    26 FYSLLLTLQYGVQPLISKRCIRRE---VIVTT-SVLTCELAKVIF--ALIFMAKEGTLKK 79
             F  LLLT+Q    PL+++    RE   V  TT +V   E+ KV+   A++    +  +K 
Sbjct:    13 FGILLLTIQQASMPLMARYSRAREDSNVFFTTVNVFMMEIIKVVVCSAIMIYTTKSVMKY 72

Query:    80 LSSQWTLVGSLTASGL----PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTY 135
             ++     +    +  L    PA IY LQN+L  I+  +L++ TF +  Q KI  TA+F Y
Sbjct:    73 INELKLAIFEHRSETLKVCIPALIYTLQNNLYYIALSHLEATTFCISYQMKIFTTAIFMY 132

Query:   136 IIL 138
               L
Sbjct:   133 FFL 135

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0002119 "nematode larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

ZFIN|ZDB-GENE-050417-460 zgc:110602 "zgc:110602" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 42/142 (29%), Positives = 73/142 (51%)

Query:    10 TGPAQASMQKMSARVLFYSL-LLTLQYGVQPLISK--RCIRRE--VIVTTSVLTC-ELAK 63
             +G A+AS    S+R+ + SL +L  Q     L  +  R +  E  + + +S + C EL K
Sbjct:    28 SGSAEASSISTSSRLKYASLGVLVFQTTTLVLTMRYSRTLHTEEPLYLASSAVVCAELLK 87

Query:    64 VIFALIFMAKEGTLKKLSSQWTLVGS------LTAS-GLPATIYALQNSLLQISYRNLDS 116
             ++  ++ + ++ +    S    L         LT    +P+ IY LQN+LL ++  NLD+
Sbjct:    88 IVACILLVFRDHSFSVRSLNLVLKEEIINRPLLTLKLAIPSGIYTLQNNLLYVALSNLDA 147

Query:   117 LTFSMLNQTKIIFTALFTYIIL 138
              T+ +  Q KI+ TALF+  +L
Sbjct:   148 ATYQVTYQLKILTTALFSVSML 169

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

WB|WBGene00015038 nstp-6 [Caenorhabditis elegans (taxid:6239)]

 Score = 123 (48.4 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 34/120 (28%), Positives = 58/120 (48%)

Query:    25 LFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIF-MAKEGTLKKLSSQ 83
             L   + +T      P + +   +   + TTSV   E+ K+ F LI  + K G++KK   +
Sbjct:    37 LISMIAVTAHSTAMPFLVRIANKTHFLPTTSVFMMEVLKLGFCLIITLFKSGSIKKTCHE 96

Query:    84 -----WTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL 138
                  W          +PA +YA+QN+L  I+  N+D  T+S+  Q +I+ TA  +  +L
Sbjct:    97 LHKTIWQNRLETMKVAVPAVVYAIQNNLYYIALANVDPTTYSVTLQIRILTTAALSVCLL 156

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

WB|WBGene00005153 srf-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 122 (48.0 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 41/132 (31%), Positives = 65/132 (49%)

Query:    16 SMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREV----IVTTSVLTCELAKVIFALIFM 71
             S   M   +L +   LTLQ  +  L+ +    REV    + T +V   E+ K    L  +
Sbjct:    37 SKGNMKTAILIW---LTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFICLFLV 93

Query:    72 AKEGTLKK-LSSQWTLVGSLTASGL----PATIYALQNSLLQISYRNLDSLTFSMLNQTK 126
             A+E T ++ + +  T +       L    PA IY +QN+L  ++  +LD+ TF + +Q K
Sbjct:    94 AQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLK 153

Query:   127 IIFTALFTYIIL 138
             I   A+FT IIL
Sbjct:   154 IFTAAIFTVIIL 165

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IC

UNIPROTKB|Q93890 srf-3 "UDP-galactose/UDP-N-acetylglucosamine transporter srf-3" [Caenorhabditis elegans (taxid:6239)]

 Score = 122 (48.0 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 41/132 (31%), Positives = 65/132 (49%)

Query:    16 SMQKMSARVLFYSLLLTLQYGVQPLISKRCIRREV----IVTTSVLTCELAKVIFALIFM 71
             S   M   +L +   LTLQ  +  L+ +    REV    + T +V   E+ K    L  +
Sbjct:    37 SKGNMKTAILIW---LTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFICLFLV 93

Query:    72 AKEGTLKK-LSSQWTLVGSLTASGL----PATIYALQNSLLQISYRNLDSLTFSMLNQTK 126
             A+E T ++ + +  T +       L    PA IY +QN+L  ++  +LD+ TF + +Q K
Sbjct:    94 AQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLK 153

Query:   127 IIFTALFTYIIL 138
             I   A+FT IIL
Sbjct:   154 IFTAAIFTVIIL 165

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

UNIPROTKB|Q9BSB7 SLC35A3 "Solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 117 (46.2 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 38/137 (27%), Positives = 73/137 (53%)

Query:    15 ASMQKMSARVLFY---SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFAL 68
             A+++ +S  +L +   SL+LT++Y        R ++ E    + +T+V+  EL K++  +
Sbjct:     3 ANLKYVSLGILVFQTTSLVLTMRYS-------RTLKEEGPRYLSSTAVVVAELLKIMACI 55

Query:    69 IFMAKEG-----TLKKLSSQWTLVGSLTAS--GLPATIYALQNSLLQISYRNLDSLTFSM 121
             + + K+       L ++     L   +      +P+ IY LQN+LL ++  NLD+ T+ +
Sbjct:    56 LLVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQV 115

Query:   122 LNQTKIIFTALFTYIIL 138
               Q KI+ TALF+  +L
Sbjct:   116 TYQLKILTTALFSVSML 132

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G5EFD3 srf-3 "Protein SRF-3, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 121 (47.7 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 38/117 (32%), Positives = 60/117 (51%)

Query:    31 LTLQYGVQPLISKRCIRREV----IVTTSVLTCELAKVIFALIFMAKEGTLKK-LSSQWT 85
             LTLQ  +  L+ +    REV    + T +V   E+ K    L  +A+E T ++ + +  T
Sbjct:     9 LTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFICLFLVAQEETPRRFIHALRT 68

Query:    86 LVGSLTASGL----PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL 138
              +       L    PA IY +QN+L  ++  +LD+ TF + +Q KI   A+FT IIL
Sbjct:    69 QILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIFTVIIL 125

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LES0	CSTR5_ARATH	No assigned EC number	0.7304	0.8333	0.3538	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_VII0191 hypothetical protein (328 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	138
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	3e-06

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 96  PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL 138
           PA IY LQN+LL ++  NLD+ T+ +  Q KI+ TALF+ ++L
Sbjct: 23  PAFIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLML 65

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.96
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.65
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.08
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	95.88
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.77
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	94.13
KOG3912	372	consensus Predicted integral membrane protein [Gen	93.83
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	93.61
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	93.5
PRK15430	296	putative chloramphenical resistance permease RarD;	92.77
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	91.98
PF13536	113	EmrE: Multidrug resistance efflux transporter	89.44
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	86.76
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	84.16
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	82.69
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	80.91
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	80.01

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.6e-29  Score=212.42  Aligned_cols=115  Identities=32%  Similarity=0.394  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCC----CcccHhHHHHHHHHHHHHHHHHHHHHhC-C-hhhhhc----cc-eeccchh
Q 036182           23 RVLFYSLLLTLQYGVQPLISKRCIR----REVIVTTSVLTCELAKVIFALIFMAKEG-T-LKKLSS----QW-TLVGSLT   91 (138)
Q Consensus        23 ~~~~~L~lL~~q~~~~~iL~~r~~~----~~y~~st~Vl~~El~Kl~is~~~~~~~~-~-~~~~~~----~~-~~~~~~~   91 (138)
                      +|+++++++++|++++++ +.||+|    ++|.++|+|+++|++|+++|+.+.++|. . .++..+    ++ ..+++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l-~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTL-LLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHH-HHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence            899999999999999986 678875    4699999999999999999999886552 2 122222    22 2233566


Q ss_pred             hhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           92 ASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        92 ~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      +.+|||++|++|||++|++++|+||+||||+||+||+|||+|++++|
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L  140 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLIL  140 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999886

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.65  E-value=1.1e-16  Score=129.20  Aligned_cols=53  Identities=40%  Similarity=0.612  Sum_probs=49.0

Q ss_pred             eccchhhhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           86 LVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        86 ~~~~~~~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      .+++..++++||++|++||||.|++++++||++||+++|+||++||+|++++|
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L   65 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLL   65 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHH
Confidence            33455689999999999999999999999999999999999999999999875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=98.08  E-value=1.8e-06  Score=67.45  Aligned_cols=45  Identities=33%  Similarity=0.267  Sum_probs=42.3

Q ss_pred             hhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHh
Q 036182           92 ASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYII  137 (138)
Q Consensus        92 ~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~ll  137 (138)
                      ++++||.+|+.||++.++++.++|+..+++. |.||++||++++.+
T Consensus         1 ~isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~   45 (222)
T TIGR00803         1 KLSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGS   45 (222)
T ss_pred             CccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999 99999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=95.88  E-value=0.14  Score=41.97  Aligned_cols=82  Identities=12%  Similarity=0.089  Sum_probs=63.1

Q ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCChhhhhccceeccchhhhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHH
Q 036182           51 IVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFT  130 (138)
Q Consensus        51 ~~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~~~~~~~~~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltT  130 (138)
                      .+....+++.+.=.+++.......+      ..-..+..+.++.++++++.+.+.+.+.+++++|.+++++.-..|++.+
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~v  104 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFK------FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPV  104 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcc------ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHH
Confidence            3666777777766666666554333      1111223445789999999999999999999999999999999999999


Q ss_pred             HHHHHHhC
Q 036182          131 ALFTYIIL  138 (138)
Q Consensus       131 Alf~~llL  138 (138)
                      .++.++++
T Consensus       105 mi~~~l~~  112 (303)
T PF08449_consen  105 MILGVLIL  112 (303)
T ss_pred             HHHHHHhc
Confidence            99998764

; GO: 0055085 transmembrane transport

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.77  E-value=0.23  Score=35.76  Aligned_cols=91  Identities=19%  Similarity=0.141  Sum_probs=63.9

Q ss_pred             CcccHhHHHHHHHHHHHHHHHHHH-HHhC-Chhhhhc-----cce-eccchhhhhhhHHHHHHHHHHHHHHHhcCChhhH
Q 036182           48 REVIVTTSVLTCELAKVIFALIFM-AKEG-TLKKLSS-----QWT-LVGSLTASGLPATIYALQNSLLQISYRNLDSLTF  119 (138)
Q Consensus        48 ~~y~~st~Vl~~El~Kl~is~~~~-~~~~-~~~~~~~-----~~~-~~~~~~~~avPA~lY~vQNnL~~val~~Ldaatf  119 (138)
                      .+.++-......-..=.++.+... ..|+ +..+...     +++ ..+.+......+++..+.|...|..+++..|.|+
T Consensus        31 ~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~  110 (153)
T PF03151_consen   31 KKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTY  110 (153)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHH
Confidence            456676666666666655555543 3333 2111111     121 2234456788999999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHhC
Q 036182          120 SMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus       120 qVl~Q~KIltTAlf~~llL  138 (138)
                      +|+.+.|.+.+-++++++.
T Consensus       111 ~v~~~~K~~~~i~~s~~~f  129 (153)
T PF03151_consen  111 SVLGNVKRILVILLSVIFF  129 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhc
Confidence            9999999999999988753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=94.13  E-value=0.54  Score=40.06  Aligned_cols=49  Identities=22%  Similarity=0.289  Sum_probs=46.5

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           90 LTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        90 ~~~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      +.++.+.|++.+.-|.+...|+++-+.+..|++.|+-|+++.++++++|
T Consensus        79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL  127 (334)
T PF06027_consen   79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFL  127 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHH
Confidence            3489999999999999999999999999999999999999999999875

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=93.83  E-value=0.31  Score=41.51  Aligned_cols=89  Identities=21%  Similarity=0.244  Sum_probs=62.7

Q ss_pred             cccHhHHHHHHHHHHHHHHHHHHHHh-C-----Chhhhhcccee-ccchhhhhhhHHHHHHHHHHHHHHHhcCChhhHHh
Q 036182           49 EVIVTTSVLTCELAKVIFALIFMAKE-G-----TLKKLSSQWTL-VGSLTASGLPATIYALQNSLLQISYRNLDSLTFSM  121 (138)
Q Consensus        49 ~y~~st~Vl~~El~Kl~is~~~~~~~-~-----~~~~~~~~~~~-~~~~~~~avPA~lY~vQNnL~~val~~LdaatfqV  121 (138)
                      ++.-+...|+.|+.=+..-..+-.+. |     +.++....-+. -+.. .+--||++-..-..+.|+++-.-.|..||.
T Consensus        39 pvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~-lfl~Pal~Di~gsslm~vgL~lTsASsfQM  117 (372)
T KOG3912|consen   39 PVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV-LFLPPALCDIAGSSLMYVGLNLTSASSFQM  117 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc-eecChHHHHHhhhHHHHHHHHHhhHHHHHH
Confidence            56788899999976544333332221 1     22333332211 1122 234499999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHhC
Q 036182          122 LNQTKIIFTALFTYIIL  138 (138)
Q Consensus       122 l~Q~KIltTAlf~~llL  138 (138)
                      +----|++|++|++.+|
T Consensus       118 lRGaviIFvglfst~~L  134 (372)
T KOG3912|consen  118 LRGAVIIFVGLFSTMFL  134 (372)
T ss_pred             hhcchhhhhHHHHHHHH
Confidence            99999999999999875

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=93.61  E-value=1.6  Score=36.72  Aligned_cols=46  Identities=17%  Similarity=0.205  Sum_probs=41.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           93 SGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        93 ~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      ...-++.|.++|...|.++++++|.++++.+.+|=+.+.+++++++
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~  324 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIF  324 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHh
Confidence            3445789999999999999999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=93.50  E-value=0.65  Score=31.45  Aligned_cols=86  Identities=15%  Similarity=0.106  Sum_probs=60.3

Q ss_pred             cccHhHHHHHHHHHHHHHHHHHHHHhCChhhhhccceeccchhhhhhhHHH-HHHHHHHHHHHHhcCChhhHHhhhhhHH
Q 036182           49 EVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATI-YALQNSLLQISYRNLDSLTFSMLNQTKI  127 (138)
Q Consensus        49 ~y~~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~~~~~~~~~~avPA~l-Y~vQNnL~~val~~LdaatfqVl~Q~KI  127 (138)
                      ++++...++...+.-.+ .+.+....+..+  ...++.+ .+....+-+++ ..+.+.+.+.++++.|++.-..+.++..
T Consensus        16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~p   91 (126)
T PF00892_consen   16 KISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPR-QWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSP   91 (126)
T ss_pred             cCCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChh-hhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHH
Confidence            37888888888887765 343332211111  2222222 22346677777 4888999999999999999999999999


Q ss_pred             HHHHHHHHHhC
Q 036182          128 IFTALFTYIIL  138 (138)
Q Consensus       128 ltTAlf~~llL  138 (138)
                      +.++++.++++
T Consensus        92 v~~~i~~~~~~  102 (126)
T PF00892_consen   92 VFAAILGWLFL  102 (126)
T ss_pred             HHHHHHHHHHc
Confidence            99999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=92.77  E-value=3.4  Score=33.52  Aligned_cols=113  Identities=13%  Similarity=0.095  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCCcccHhHHHHHHHHHHHHHHHHHHHHhCChhhhhccceeccchhhhhhhHHHHHHH
Q 036182           24 VLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPATIYALQ  103 (138)
Q Consensus        24 ~~~~L~lL~~q~~~~~iL~~r~~~~~y~~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~~~~~~~~~~avPA~lY~vQ  103 (138)
                      +.+..++-++-++...+.. |.. .++.+...++..=++=.++.+.+...+++.....+.++.++.......-++.+.++
T Consensus         9 g~~~~l~a~~~wg~~~~~~-k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (296)
T PRK15430          9 GVLLALAAYFIWGIAPAYF-KLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGN   86 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence            4555555566677776644 543 34666666665555433222222222333222211122222322345667889999


Q ss_pred             HHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182          104 NSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus       104 NnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      +.+.|.++++.+++.=.+++.+-=+.+++++++++
T Consensus        87 ~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l  121 (296)
T PRK15430         87 WLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL  121 (296)
T ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999988764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=91.98  E-value=1.7  Score=35.23  Aligned_cols=115  Identities=11%  Similarity=0.139  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCC-CcccHhHHHHHHHHHHHHHHHHHH-HHhCCh---hhhhc---cceeccchhhhhh
Q 036182           24 VLFYSLLLTLQYGVQPLISKRCIR-REVIVTTSVLTCELAKVIFALIFM-AKEGTL---KKLSS---QWTLVGSLTASGL   95 (138)
Q Consensus        24 ~~~~L~lL~~q~~~~~iL~~r~~~-~~y~~st~Vl~~El~Kl~is~~~~-~~~~~~---~~~~~---~~~~~~~~~~~av   95 (138)
                      +.+..++=++-++.+.++.+|..+ .++++.+....+=..=.+..+.+. ..|+..   .+...   .+.....+....+
T Consensus       146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (302)
T TIGR00817       146 GFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLV  225 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHH
Confidence            544444445556666665555443 256655554444333222222222 233311   11111   0111111111334


Q ss_pred             hHH-HHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           96 PAT-IYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        96 PA~-lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      .++ .|...|.+.|.++++.+|.++++...+|-+.+++++++++
T Consensus       226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~l  269 (302)
T TIGR00817       226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFF  269 (302)
T ss_pred             HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhc
Confidence            544 7888888889999999999999999999999999887764

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=89.44  E-value=2.8  Score=29.24  Aligned_cols=64  Identities=17%  Similarity=0.146  Sum_probs=44.5

Q ss_pred             HhCChhhhhccceeccchhhhhhhHHHH-HHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           73 KEGTLKKLSSQWTLVGSLTASGLPATIY-ALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~avPA~lY-~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      ..++.++..+..+.++.. ....=+++. .+.+.+.+.|+++.++ .-.++.++-.+.+++++++++
T Consensus        18 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen   18 IRGRLRDLFRALRRKPWL-WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHccHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            345555555545443322 222224444 4889999999999995 777999999999999998864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=86.76  E-value=1.4  Score=35.72  Aligned_cols=50  Identities=10%  Similarity=0.082  Sum_probs=44.5

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           89 SLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        89 ~~~~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      .+.....-+++.++.+.+.+.++++.+++.++++..+-.+.|++++++++
T Consensus        64 ~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~  113 (302)
T TIGR00817        64 LLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFL  113 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHh
Confidence            44467777888889999999999999999999999999999999998864

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=84.16  E-value=8.8  Score=32.58  Aligned_cols=35  Identities=20%  Similarity=0.106  Sum_probs=31.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHH
Q 036182           93 SGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKI  127 (138)
Q Consensus        93 ~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KI  127 (138)
                      +..=++++..+|...|..+.+..|.||||.++.|-
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~  272 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKR  272 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceE
Confidence            44445999999999999999999999999999984

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=82.69  E-value=24  Score=29.59  Aligned_cols=84  Identities=18%  Similarity=0.074  Sum_probs=57.9

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCChhhhhccce-eccchhhhhhhHHHHHHHHHHHHHHHhcCChhhHHhhhhhHHHHH
Q 036182           52 VTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWT-LVGSLTASGLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFT  130 (138)
Q Consensus        52 ~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~~-~~~~~~~~avPA~lY~vQNnL~~val~~LdaatfqVl~Q~KIltT  130 (138)
                      +-+...+.=++-.+++..+. .-+- .+. .+++ .++.++.....++++...+...+.+++..+++.+|++.-+--+.|
T Consensus        78 P~~l~~~~~~~~~l~~~~~~-~~~~-~~~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft  154 (350)
T PTZ00343         78 PWTISSLQLFVGWLFALLYW-ATGF-RKI-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFT  154 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHH-HhCC-CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHH
Confidence            67777666666655444332 2111 010 0111 122344677888889888888999999999999999999999999


Q ss_pred             HHHHHHhC
Q 036182          131 ALFTYIIL  138 (138)
Q Consensus       131 Alf~~llL  138 (138)
                      ++++++++
T Consensus       155 ~lls~~~l  162 (350)
T PTZ00343        155 ALLSILFL  162 (350)
T ss_pred             HHHHHHHh
Confidence            99998864

>TIGR00688 rarD rarD protein

Probab=80.91  E-value=25  Score=27.56  Aligned_cols=113  Identities=13%  Similarity=0.057  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCCcccHhHHHHHHHHHHHHHHHHHHHHhCChhhhhccc---eeccchhhhhhhHHHH
Q 036182           24 VLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQW---TLVGSLTASGLPATIY  100 (138)
Q Consensus        24 ~~~~L~lL~~q~~~~~iL~~r~~~~~y~~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~---~~~~~~~~~avPA~lY  100 (138)
                      +++..++-++-++...+. .|+- .+.++...++.--+.=.++-+.+....++.+...+.+   +.++......+-+++.
T Consensus         3 g~~~~i~a~~~wg~~~~~-~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYY-SKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI   80 (256)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence            445555566667777754 4553 2477777777665543222111111222211111111   1222233467888889


Q ss_pred             HHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182          101 ALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus       101 ~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      .+.+.+.|.++++.+++.=.++.++==+.+++++++++
T Consensus        81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l  118 (256)
T TIGR00688        81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFL  118 (256)
T ss_pred             HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998888999888764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=80.01  E-value=33  Score=28.59  Aligned_cols=110  Identities=16%  Similarity=0.135  Sum_probs=75.0

Q ss_pred             ccchHHHHHHHHHHHHHhhhhhhhhhcCCCcccHhHHHHHHHHHHHHHHHHHHHHhCChhhhhccceeccchhhhhhhHH
Q 036182           19 KMSARVLFYSLLLTLQYGVQPLISKRCIRREVIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTASGLPAT   98 (138)
Q Consensus        19 ~~~~~~~~~L~lL~~q~~~~~iL~~r~~~~~y~~st~Vl~~El~Kl~is~~~~~~~~~~~~~~~~~~~~~~~~~~avPA~   98 (138)
                      +...+.+..+++-++-+..++.+ -|+.+  .+. ...++-|.+=++++..++..-.     .+..+.+..+ +-.++.+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~-~~~~~--~~~-~~~~lPqaiGm~i~a~i~~~~~-----~~~~~~k~~~-~nil~G~  203 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVI-PKAFH--VSG-WSAFLPQAIGMLIGAFIFNLFS-----KKPFFEKKSW-KNILTGL  203 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHH-HHhcC--CCh-hHhHHHHHHHHHHHHHHHhhcc-----cccccccchH-HhhHHHH
Confidence            33455677777778888777764 45432  233 3445577777766655542211     1112223333 5688999


Q ss_pred             HHHHHHHHHHHHHhcCChhhHHhhhhhHHHHHHHHHHHhC
Q 036182           99 IYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIIL  138 (138)
Q Consensus        99 lY~vQNnL~~val~~LdaatfqVl~Q~KIltTAlf~~llL  138 (138)
                      ++.+-|...+++.+++..++=-.++|+-++...+...++|
T Consensus       204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il  243 (269)
T PF06800_consen  204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFIL  243 (269)
T ss_pred             HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEE
Confidence            9999999999999999999999999999998888766543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00