Citrus Sinensis ID: 036219

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
LAKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHccccHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHEEEEcccc
Coil and Loop (DISEMBL)
lakeqqatGVGIILQIMMLVLSFVLGHvlrrhkfyylpeasASLLIGLSVGalanisntetnirySFSFNELICSSATCLVMILFswqkpffsnfgAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Flexible Loop (DISEMBL)
LAKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Low Complexity Region (SEG)
LAKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Disordered region (IsUnstruct)
*******TGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEV****
Disordered Region (DISOPRED)
******ATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Disordered Region (DISEMBL)
LAKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Disordered Region (DISPRO)
LAK*QQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LAKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	149	2.2.26 [Sep-21-2011]
Q8RWU6	535	Sodium/hydrogen exchanger	yes	no	0.906	0.252	0.605	3e-37
Q8S396	521	Sodium/hydrogen exchanger	no	no	0.906	0.259	0.598	2e-36
Q4L208	575	Sodium/hydrogen exchanger	yes	no	0.711	0.184	0.290	3e-06
Q8R4D1	576	Sodium/hydrogen exchanger	yes	no	0.711	0.184	0.290	3e-06
Q9Y2E8	581	Sodium/hydrogen exchanger	yes	no	0.711	0.182	0.290	3e-06
Q4R8V4	542	Sodium/hydrogen exchanger	N/A	no	0.711	0.195	0.290	3e-06
Q5ZJ75	574	Sodium/hydrogen exchanger	yes	no	0.711	0.184	0.266	2e-05

>sp|Q8RWU6|NHX6_ARATH Sodium/hydrogen exchanger 6 OS=Arabidopsis thaliana GN=NHX6 PE=1 SV=3

 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGL VG LANISNTET+
Sbjct: 19  KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETS 78

Query: 63  IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F++    +      +    FS Q KPFFSNFGAIVTF++ GTF+ASMV G+   
Sbjct: 79  IRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGL--- 135

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L    F  + +P +   M+
Sbjct: 136 LVYLGGVMFLMYRLPFVECLMF 157

Involved in trafficking to the vacuole. Required for cell proliferation and cell expansion, but not for cell differentiation. May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8S396|NHX5_ARATH Sodium/hydrogen exchanger 5 OS=Arabidopsis thaliana GN=NHX5 PE=2 SV=2

 Score =  151 bits (381), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRH+F+YLPEAS SLLIGL VG LANIS+TET+
Sbjct: 18  KQQQAAGVGILLQIMMLVLSFVLGHVLRRHRFHYLPEASGSLLIGLIVGILANISDTETS 77

Query: 63  IRYSFSFNELICSSATCLVMIL---FSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F+E          +I    FS Q KPFFSNFGAIVTFAI GTF+AS+V G    
Sbjct: 78  IRTWFNFHEEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFAIIGTFVASVVTG---G 134

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L  S +  + +P +   M+
Sbjct: 135 LVYLGGSMYLMYKLPFVECLMF 156

Involved in trafficking to the vacuole. Required for cell proliferation and cell expansion, but not for cell differentiation. Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q4L208|SL9A8_RAT Sodium/hydrogen exchanger 8 OS=Rattus norvegicus GN=Slc9a8 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 18/124 (14%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGA---------L 53
           +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA         L
Sbjct: 47  QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKL 106

Query: 54  ANISNTE---TNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLAS 110
           AN    E    N+ +      +I  S   L       +  FF N G+I  FA+FGT +++
Sbjct: 107 ANWKEEEMFRPNMFFLLLLPPIIFESGYSL------HKGNFFQNIGSITLFAVFGTAISA 160

Query: 111 MVMG 114
            V+G
Sbjct: 161 FVVG 164

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Rattus norvegicus (taxid: 10116)

>sp|Q8R4D1|SL9A8_MOUSE Sodium/hydrogen exchanger 8 OS=Mus musculus GN=Slc9a8 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 18/124 (14%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGA---------L 53
           +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA         L
Sbjct: 48  QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKL 107

Query: 54  ANISNTE---TNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLAS 110
           AN    E    N+ +      +I  S   L       +  FF N G+I  FA+FGT +++
Sbjct: 108 ANWKEEEMFRPNMFFLLLLPPIIFESGYSL------HKGNFFQNIGSITLFAVFGTAISA 161

Query: 111 MVMG 114
            V+G
Sbjct: 162 FVVG 165

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Mus musculus (taxid: 10090)

>sp|Q9Y2E8|SL9A8_HUMAN Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 18/124 (14%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGA---------L 53
           +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA         L
Sbjct: 53  QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 112

Query: 54  ANISNTE---TNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLAS 110
           AN    E    N+ +      +I  S   L       +  FF N G+I  FA+FGT +++
Sbjct: 113 ANWKEEEMFRPNMFFLLLLPPIIFESGYSL------HKGNFFQNIGSITLFAVFGTAISA 166

Query: 111 MVMG 114
            V+G
Sbjct: 167 FVVG 170

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q4R8V4|SL9A8_MACFA Sodium/hydrogen exchanger 8 OS=Macaca fascicularis GN=SLC9A8 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 18/124 (14%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGA---------L 53
           +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA         L
Sbjct: 53  QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKL 112

Query: 54  ANISNTE---TNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLAS 110
           AN    E    N+ +      +I  S   L       +  FF N G+I  FA+FGT +++
Sbjct: 113 ANWKEEEMFRPNMFFLLLLPPIIFESGYSL------HKGNFFQNIGSITLFAVFGTAISA 166

Query: 111 MVMG 114
            V+G
Sbjct: 167 FVVG 170

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Macaca fascicularis (taxid: 9541)

>sp|Q5ZJ75|SL9A8_CHICK Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 18/124 (14%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGA---------L 53
           +E+Q++G+ I   +++L +  +L H+L +++ ++LPE+ A + +G+ +GA         L
Sbjct: 46  QEEQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGIIMGAFIKIIEAQKL 105

Query: 54  ANISNTE---TNIRYSFSFNELICSSATCLVMILFSWQKPFFSNFGAIVTFAIFGTFLAS 110
           AN    E    N+ +      +I  S   L       +  FF N G+I  F++FGT +++
Sbjct: 106 ANWKEEEMFRPNMFFLLLLPPIIFESGYSL------HKGNFFQNIGSITLFSVFGTAISA 159

Query: 111 MVMG 114
            ++G
Sbjct: 160 FIVG 163

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
226495383	536	uncharacterized protein LOC100272972 [Ze	0.912	0.253	0.587	1e-35
414884878	524	TPA: hypothetical protein ZEAMMB73_53850	0.912	0.259	0.587	1e-35
195652333	536	sodium/hydrogen exchanger family protein	0.912	0.253	0.587	1e-35
297842753	536	predicted protein [Arabidopsis lyrata su	0.906	0.251	0.605	1e-35
150247015	526	Na+/H+ antiporter [Mesembryanthemum crys	0.953	0.269	0.58	2e-35
449443680	880	PREDICTED: sodium/hydrogen exchanger 6-l	0.906	0.153	0.598	2e-35
19919848	525	Na+/H+ exchanger 6 [Arabidopsis thaliana	0.906	0.257	0.605	2e-35
22330742	535	sodium/hydrogen exchanger 6 [Arabidopsis	0.906	0.252	0.605	2e-35
357157864	534	PREDICTED: sodium/hydrogen exchanger 6-l	0.906	0.252	0.591	2e-35
60932228	526	Na+/H+ antiporter [Populus tomentosa]	0.765	0.216	0.694	2e-35

>gi|226495383|ref|NP_001140895.1| uncharacterized protein LOC100272972 [Zea mays] gi|194701636|gb|ACF84902.1| unknown [Zea mays]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 102/143 (71%), Gaps = 7/143 (4%)

Query: 2   AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTET 61
            KEQQ  GVGI+LQI MLVLSFVLGHVLRRH+FYYLPEASASLLIGL VG LANISNTET
Sbjct: 28  GKEQQVAGVGILLQISMLVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTET 87

Query: 62  NIRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPV 117
           N R  F+F+E          +I  S      KPFF+NFGAIVTFAI GTF+AS+V G+  
Sbjct: 88  NTRTWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASVVTGV-- 145

Query: 118 SVLFLLCSSFCFWAIPMIWICMW 140
            +++L   +F  + +P++   M+
Sbjct: 146 -LVYLGGLTFLMYKLPLVECLMF 167

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414884878|tpg|DAA60892.1| TPA: hypothetical protein ZEAMMB73_538503 [Zea mays]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 102/143 (71%), Gaps = 7/143 (4%)

Query: 2   AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTET 61
            KEQQ  GVGI+LQI MLVLSFVLGHVLRRH+FYYLPEASASLLIGL VG LANISNTET
Sbjct: 28  GKEQQVAGVGILLQISMLVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTET 87

Query: 62  NIRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPV 117
           N R  F+F+E          +I  S      KPFF+NFGAIVTFAI GTF+AS+V G+  
Sbjct: 88  NTRTWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASVVTGV-- 145

Query: 118 SVLFLLCSSFCFWAIPMIWICMW 140
            +++L   +F  + +P++   M+
Sbjct: 146 -LVYLGGLTFLMYKLPLVECLMF 167

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195652333|gb|ACG45634.1| sodium/hydrogen exchanger family protein [Zea mays] gi|224034271|gb|ACN36211.1| unknown [Zea mays] gi|414884879|tpg|DAA60893.1| TPA: sodium/hydrogen exchanger [Zea mays]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 102/143 (71%), Gaps = 7/143 (4%)

Query: 2   AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTET 61
            KEQQ  GVGI+LQI MLVLSFVLGHVLRRH+FYYLPEASASLLIGL VG LANISNTET
Sbjct: 28  GKEQQVAGVGILLQISMLVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTET 87

Query: 62  NIRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPV 117
           N R  F+F+E          +I  S      KPFF+NFGAIVTFAI GTF+AS+V G+  
Sbjct: 88  NTRTWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASVVTGV-- 145

Query: 118 SVLFLLCSSFCFWAIPMIWICMW 140
            +++L   +F  + +P++   M+
Sbjct: 146 -LVYLGGLTFLMYKLPLVECLMF 167

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842753|ref|XP_002889258.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335099|gb|EFH65517.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGL VG LANISNTET+
Sbjct: 19  KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETS 78

Query: 63  IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F++    +      +    FS Q KPFFSNFGAIVTF++ GTF+ASMV G+   
Sbjct: 79  IRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGV--- 135

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L    F  + +P +   M+
Sbjct: 136 LVYLGGVMFLMYRLPFVECLMF 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|150247015|emb|CAO01506.1| Na+/H+ antiporter [Mesembryanthemum crystallinum]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/150 (58%), Positives = 108/150 (72%), Gaps = 8/150 (5%)

Query: 2   AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTET 61
           AKEQQA GVGI+LQIMMLVLSF+LGHVLRRHKF+Y+PE SASLLIGL VG LANISNTET
Sbjct: 16  AKEQQAAGVGILLQIMMLVLSFILGHVLRRHKFFYIPEVSASLLIGLVVGGLANISNTET 75

Query: 62  NIRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPV 117
           +IR  F+F+E          +I  S      KPFFSNFGAIVTF+I GTF+AS++ G+  
Sbjct: 76  SIRGWFNFHEEFFFLFLLPPIIFQSGFILSPKPFFSNFGAIVTFSILGTFIASVLTGL-- 133

Query: 118 SVLFLLCSSFCFWAIPMIWICMWLKFEVSS 147
            +++L   +F  + +P+I  CM     +SS
Sbjct: 134 -LVYLGGITFLMYKLPLIE-CMMFGALISS 161

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443680|ref|XP_004139605.1| PREDICTED: sodium/hydrogen exchanger 6-like [Cucumis sativus]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 102/142 (71%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRH+ Y+LPEASASLLIGL VG LANISNTETN
Sbjct: 77  KDQQAAGVGILLQIMMLVLSFVLGHVLRRHRLYFLPEASASLLIGLIVGGLANISNTETN 136

Query: 63  IRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F+E          +I  S      KPFFSNFGAIVTFAI GTF+AS+V G    
Sbjct: 137 IRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAILGTFIASVVTG---G 193

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L   +F  + +P +   M+
Sbjct: 194 LVYLGGLAFLMYRLPFVECLMF 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|19919848|gb|AAM08407.1|AF490590_1 Na+/H+ exchanger 6 [Arabidopsis thaliana]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGL VG LANISNTET+
Sbjct: 19  KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETS 78

Query: 63  IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F++    +      +    FS Q KPFFSNFGAIVTF++ GTF+ASMV G+   
Sbjct: 79  IRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGL--- 135

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L    F  + +P +   M+
Sbjct: 136 LVYLGGVMFLMYRLPFVECLMF 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22330742|ref|NP_178079.2| sodium/hydrogen exchanger 6 [Arabidopsis thaliana] gi|332278234|sp|Q8RWU6.3|NHX6_ARATH RecName: Full=Sodium/hydrogen exchanger 6; AltName: Full=Na(+)/H(+) exchanger 6; Short=NHE-6 gi|20268694|gb|AAM14051.1| unknown protein [Arabidopsis thaliana] gi|22136726|gb|AAM91682.1| unknown protein [Arabidopsis thaliana] gi|332198151|gb|AEE36272.1| sodium/hydrogen exchanger 6 [Arabidopsis thaliana]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           K+QQA GVGI+LQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGL VG LANISNTET+
Sbjct: 19  KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETS 78

Query: 63  IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
           IR  F+F++    +      +    FS Q KPFFSNFGAIVTF++ GTF+ASMV G+   
Sbjct: 79  IRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGL--- 135

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L    F  + +P +   M+
Sbjct: 136 LVYLGGVMFLMYRLPFVECLMF 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357157864|ref|XP_003577939.1| PREDICTED: sodium/hydrogen exchanger 6-like [Brachypodium distachyon]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 102/142 (71%), Gaps = 7/142 (4%)

Query: 3   KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
           KEQQ  GVGI+LQI MLVLSFVLGHVLRRH+FYYLPEASASLLIGL VG LANISNTETN
Sbjct: 28  KEQQVAGVGILLQISMLVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTETN 87

Query: 63  IRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
            R  F+F+E          +I  S      KPFF+NFGAIVTFAI GTF+AS+V G+   
Sbjct: 88  TRTWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASIVTGM--- 144

Query: 119 VLFLLCSSFCFWAIPMIWICMW 140
           +++L   +F  + +P++   M+
Sbjct: 145 LVYLGGLTFLMYKLPLVECLMF 166

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60932228|gb|AAX37333.1| Na+/H+ antiporter [Populus tomentosa]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 92/118 (77%), Gaps = 4/118 (3%)

Query: 2   AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTET 61
            KEQQA GVGI+LQIMMLVLSFVLGHVLRRH+FYYLPEASASLLIGL VGAL NISNTET
Sbjct: 16  GKEQQAAGVGILLQIMMLVLSFVLGHVLRRHRFYYLPEASASLLIGLIVGALTNISNTET 75

Query: 62  NIRYSFSFNELICSSATCLVMILFSW----QKPFFSNFGAIVTFAIFGTFLASMVMGI 115
           +IR  F+F+E          +I  S      KPFFSNFGAIVTF+I GTF+AS+V G+
Sbjct: 76  SIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFSILGTFIASVVTGV 133

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
TAIR|locus:2019853	535	NHX6 "Na+/H+ antiporter 6" [Ar	0.812	0.226	0.671	7.2e-36
TAIR|locus:2020068	521	NHX5 "sodium hydrogen exchange	0.906	0.259	0.591	2.8e-34
UNIPROTKB|E2R7C3	581	SLC9A8 "Sodium/hydrogen exchan	0.738	0.189	0.3	9.8e-09
UNIPROTKB|Q9Y2E8	581	SLC9A8 "Sodium/hydrogen exchan	0.738	0.189	0.3	9.8e-09
UNIPROTKB|F1MWW1	585	LOC617800 "Sodium/hydrogen exc	0.738	0.188	0.3	9.9e-09
RGD|1308193	575	Slc9a8 "solute carrier family	0.738	0.191	0.291	1.2e-08
UNIPROTKB|Q4L208	575	Slc9a8 "Sodium/hydrogen exchan	0.738	0.191	0.291	1.2e-08
MGI|MGI:1924281	576	Slc9a8 "solute carrier family	0.738	0.190	0.291	1.2e-08
UNIPROTKB|Q5ZJ75	574	Q5ZJ75 "Sodium/hydrogen exchan	0.738	0.191	0.275	4.3e-08
UNIPROTKB|F1N9A5	586	SLC9A8 "Sodium/hydrogen exchan	0.738	0.187	0.275	4.4e-08

TAIR|locus:2019853 NHX6 "Na+/H+ antiporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 86/128 (67%), Positives = 100/128 (78%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             K+QQA GVGI+LQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGL VG LANISNTET+
Sbjct:    19 KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETS 78

Query:    63 IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPV- 117
             IR  F+F++    +      +    FS Q KPFFSNFGAIVTF++ GTF+ASMV G+ V 
Sbjct:    79 IRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGLLVY 138

Query:   118 --SVLFLL 123
                V+FL+
Sbjct:   139 LGGVMFLM 146

GO:0005737 "cytoplasm" evidence=ISM

GO:0006812 "cation transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA;ISS;RCA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0010351 "lithium ion transport" evidence=RCA

TAIR|locus:2020068 NHX5 "sodium hydrogen exchanger 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 84/142 (59%), Positives = 104/142 (73%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             K+QQA GVGI+LQIMMLVLSFVLGHVLRRH+F+YLPEAS SLLIGL VG LANIS+TET+
Sbjct:    18 KQQQAAGVGILLQIMMLVLSFVLGHVLRRHRFHYLPEASGSLLIGLIVGILANISDTETS 77

Query:    63 IRYSFSFNE---LICSSATCLVMILFSWQ-KPFFSNFGAIVTFAIFGTFLASMVMGIPVS 118
             IR  F+F+E    +      +    FS Q KPFFSNFGAIVTFAI GTF+AS+V G    
Sbjct:    78 IRTWFNFHEEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFAIIGTFVASVVTG---G 134

Query:   119 VLFLLCSSFCFWAIPMIWICMW 140
             +++L  S +  + +P +   M+
Sbjct:   135 LVYLGGSMYLMYKLPFVECLMF 156

GO:0005737 "cytoplasm" evidence=ISM

GO:0006814 "sodium ion transport" evidence=IGI;ISS;RCA

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;ISS

GO:0035725 "sodium ion transmembrane transport" evidence=IGI;ISS

GO:0005768 "endosome" evidence=IDA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0006869 "lipid transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0010351 "lithium ion transport" evidence=IGI;RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

GO:0015081 "sodium ion transmembrane transporter activity" evidence=IGI

UNIPROTKB|E2R7C3 SLC9A8 "Sodium/hydrogen exchanger" [Canis lupus familiaris (taxid:9615)]

 Score = 141 (54.7 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 36/120 (30%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  I   E  
Sbjct:    53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKI--IEFK 110

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   111 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 170

GO:0051453 "regulation of intracellular pH" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9Y2E8 SLC9A8 "Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)]

 Score = 141 (54.7 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 36/120 (30%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  I   E  
Sbjct:    53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKI--IEFK 110

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   111 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 170

GO:0016021 "integral to membrane" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0051453 "regulation of intracellular pH" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1MWW1 LOC617800 "Sodium/hydrogen exchanger" [Bos taurus (taxid:9913)]

 Score = 141 (54.7 bits), Expect = 9.9e-09, P = 9.9e-09
 Identities = 36/120 (30%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  I   E  
Sbjct:    56 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKI--IEFK 113

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   114 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 173

GO:0051453 "regulation of intracellular pH" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1308193 Slc9a8 "solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8" [Rattus norvegicus (taxid:10116)]

 Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/120 (29%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  +   E  
Sbjct:    47 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKV--IEFK 104

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   105 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 164

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006813 "potassium ion transport" evidence=ISO

GO:0006814 "sodium ion transport" evidence=ISO

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;ISO

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA;ISO

GO:0015992 "proton transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISO

GO:0051453 "regulation of intracellular pH" evidence=IEA;ISO

UNIPROTKB|Q4L208 Slc9a8 "Sodium/hydrogen exchanger 8" [Rattus norvegicus (taxid:10116)]

 Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/120 (29%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  +   E  
Sbjct:    47 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKV--IEFK 104

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   105 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 164

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1924281 Slc9a8 "solute carrier family 9 (sodium/hydrogen exchanger), member 8" [Mus musculus (taxid:10090)]

 Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/120 (29%), Positives = 70/120 (58%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+ +GA+  +   E  
Sbjct:    48 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKV--IEFK 105

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  FA+FGT +++ V+G
Sbjct:   106 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG 165

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IDA

GO:0006814 "sodium ion transport" evidence=IDA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IDA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IDA

GO:0015992 "proton transport" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=IDA

GO:0051453 "regulation of intracellular pH" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q5ZJ75 Q5ZJ75 "Sodium/hydrogen exchanger 8" [Gallus gallus (taxid:9031)]

 Score = 135 (52.6 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 33/120 (27%), Positives = 69/120 (57%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L +++ ++LPE+ A + +G+ +GA   I   E  
Sbjct:    46 QEEQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGIIMGAFIKI--IEAQ 103

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  F++FGT +++ ++G
Sbjct:   104 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVG 163

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|F1N9A5 SLC9A8 "Sodium/hydrogen exchanger" [Gallus gallus (taxid:9031)]

 Score = 135 (52.6 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 33/120 (27%), Positives = 69/120 (57%)

Query:     3 KEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN 62
             +E+Q++G+ I   +++L +  +L H+L +++ ++LPE+ A + +G+ +GA   I   E  
Sbjct:    46 QEEQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGIIMGAFIKI--IEAQ 103

Query:    63 IRYSFSFNELICSSATCLVM---ILF----SWQKP-FFSNFGAIVTFAIFGTFLASMVMG 114
                ++   E+   +   L++   I+F    S  K  FF N G+I  F++FGT +++ ++G
Sbjct:   104 KLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVG 163

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0051453 "regulation of intracellular pH" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Al_scaffold_0002_2681 annotation not avaliable (536 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	149
KOG1965	575	consensus Sodium/hydrogen exchanger protein [Inorg	99.96
KOG1966	670	consensus Sodium/hydrogen exchanger protein [Inorg	99.88
TIGR00840	559	b_cpa1 sodium/hydrogen exchanger 3. This model is	99.75
TIGR00831	525	a_cpa1 Na+/H+ antiporter, bacterial form. This mod	98.61
COG0025	429	NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg	98.37
PRK05326	562	potassium/proton antiporter; Reviewed	96.59
TIGR00844	810	c_cpa1 na(+)/h(+) antiporter. This model is specif	94.73
PF00999	380	Na_H_Exchanger: Sodium/hydrogen exchanger family;	93.25
TIGR00932	273	2a37 transporter, monovalent cation:proton antipor	83.79

>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]

Probab=99.96  E-value=7.2e-30  Score=228.68  Aligned_cols=141  Identities=32%  Similarity=0.551  Sum_probs=129.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCcc--ccccccccccceeeccc
Q 036219            2 AKEQQATGVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETN--IRYSFSFNELICSSATC   79 (149)
Q Consensus         2 ~~~~~~~s~~ll~~i~lL~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~--i~~~~~f~~~iFF~~~L   79 (149)
                      +|+||++++++++++++|++|++++|+++++|+||+|||++++++|+++|.+++++.++..  .++...|+|+.||.+ +
T Consensus        27 ~~~e~~~~~al~~~i~lL~l~iv~~hll~~~R~~~l~Esv~~l~iGl~vG~vi~~~~~~~s~~~~~~~~f~~~~ff~v-L  105 (575)
T KOG1965|consen   27 SEQEHASSVALLFFILLLVLCIVLGHLLEETRFRWLPESVAALFIGLLVGLVIRYSSGGKSSRGKRILVFSPDLFFLV-L  105 (575)
T ss_pred             hhhhhcchhhHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhhcCCCcccccceeEEecccHHHHH-h
Confidence            5789999999999999999999999999999999999999999999999999999887432  125668999999999 9


Q ss_pred             ccch----hhhc-chhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhccc
Q 036219           80 LVMI----LFSW-QKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS  147 (149)
Q Consensus        80 LPPI----Gy~l-k~~FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~  147 (149)
                      ||||    ||+| |++||||+++|+.+|+.||+||+.++|.+.|..+. +..  .+++++. ||+.||+..|.
T Consensus       106 LPpiif~sgy~l~k~~fF~n~~si~~fa~~Gt~IS~~~ig~gv~~~~~-~~~--~~~~~f~-d~L~fGaliSA  174 (575)
T KOG1965|consen  106 LPPIIFNSGYSLKKKQFFRNIGSILLFAIFGTFISAVIIGAGVYLLGF-GLL--IYDLSFK-DCLAFGALISA  174 (575)
T ss_pred             hchhhhcccceechhhhhhhhHHHHHhhhcceeeehhHHhhHHHHHhc-ccc--cccccHH-HHHHHhhHhcc
Confidence            9999    9999 99999999999999999999999999999999998 443  5889997 99999998875

>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]

Probab=99.88  E-value=3.1e-23  Score=186.83  Aligned_cols=129  Identities=21%  Similarity=0.281  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCccccccccccccceeecccccch----h
Q 036219            9 GVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMI----L   84 (149)
Q Consensus         9 s~~ll~~i~lL~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~i~~~~~f~~~iFF~~~LLPPI----G   84 (149)
                      ...+-+++++-.++.+.-|..++ --+++||||++|++|+++|.+++...+.    +...++|++||+| |||||    |
T Consensus        41 p~vi~lwil~asLaKi~fh~~~~-l~~i~PES~lLI~~Gl~lG~ii~~~~~~----~~~~L~s~vFFly-LLPPIvlDAG  114 (670)
T KOG1966|consen   41 PYVITLWILVASLAKIVFHLMPK-LRKIVPESCLLIILGLVLGGIIKALATI----APFFLESDVFFLY-LLPPIVLDAG  114 (670)
T ss_pred             chhhHHHHHHHHHHHhccccccc-ccccCchhHHHHHHHHHHHHHHHhhhcc----ccccccccchhhh-hcCHHHhccc
Confidence            34445555555555555555542 2268999999999999999999988762    3457889999999 99999    9


Q ss_pred             hhc-chhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhcc
Q 036219           85 FSW-QKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVS  146 (149)
Q Consensus        85 y~l-k~~FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~  146 (149)
                      |+| +|.||+|+|+|++||++||+||++.+|..+|.+++.|+-..  +++++ +=+.||+..|
T Consensus       115 YfMp~r~Ff~NlgtILlfAVvGTi~Na~~~g~sL~~i~~~glf~~--~~gll-d~LlFgSLIs  174 (670)
T KOG1966|consen  115 YFMPNRAFFENLGTILLFAVVGTIWNAFTIGASLYAISLSGLFGM--SIGLL-DILLFGSLIS  174 (670)
T ss_pred             ccCccHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CchHH-HHHHHHHHHH
Confidence            999 99999999999999999999999999999999999998522  47887 9999998765

>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3

Probab=99.75  E-value=2.5e-18  Score=155.22  Aligned_cols=129  Identities=23%  Similarity=0.330  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCccccccccccccceeecccccch----hhh
Q 036219           11 GIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMI----LFS   86 (149)
Q Consensus        11 ~ll~~i~lL~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~i~~~~~f~~~iFF~~~LLPPI----Gy~   86 (149)
                      .+.+++++..++ ..++.+.|++.+.+||+++.+++|+++|.+.+..+..    +...+||++||.+ +||||    ||+
T Consensus        10 ~~~~~~l~~~~~-~~~~~~~~~~~~~lP~s~llil~GlllG~i~~~~~~~----~~~~l~~~lf~~~-~LPpIlFe~g~~   83 (559)
T TIGR00840        10 EFILWILLASLA-KIGFHLTHKVIRAVPESVLLIVYGLLVGGIIKASPHI----DPPTLDSSYFFLY-LLPPIVLDAGYF   83 (559)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHcCCCC----ccCCcCHHHHHHH-HHHHHHHHHHhc
Confidence            333443333333 3567777788889999999999999999987766542    3457999999999 99999    999


Q ss_pred             c-chhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhccc
Q 036219           87 W-QKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS  147 (149)
Q Consensus        87 l-k~~FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~  147 (149)
                      + +|.|++|+++|+++|++||+++++++|..+|++...+.... .++|+. +|+.||+-+|+
T Consensus        84 l~~~~f~~n~~~Il~lAv~Gvlit~~~ig~~l~~~~~~~~~~~-~~l~~~-~allfGAiiSa  143 (559)
T TIGR00840        84 MPQRNFFENLGSILIFAVVGTLINAFVIGLSLYGICLIGGFGS-IDIGLL-DNLLFGSLISA  143 (559)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCCHH-HHHHHhHHhcC
Confidence            9 99999999999999999999999999999998765443211 467876 99999998876

This model is specific for the eukaryotic members members of this family.

>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form

Probab=98.61  E-value=8.9e-08  Score=86.09  Aligned_cols=108  Identities=19%  Similarity=0.287  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCccccccccccccceeecccccch----hhhc-chhhhc
Q 036219           19 LVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMI----LFSW-QKPFFS   93 (149)
Q Consensus        19 L~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~i~~~~~f~~~iFF~~~LLPPI----Gy~l-k~~FF~   93 (149)
                      +++........++.   -+|.....++.|+++|......        ...+||+.++.. .|||+    |+++ .+.|.+
T Consensus         7 ~~~~~~~~~l~~r~---~lP~~v~lil~Gi~lg~~~~~~--------~~~~~~~~~~~~-~Lp~lLF~~g~~~~~~~l~~   74 (525)
T TIGR00831         7 VMLATAVAVTVKFI---RLPYPIALILAGLLLGLAGLLP--------EVPLDREIVLFL-FLPPLLFEAAMNTDLRELRE   74 (525)
T ss_pred             HHHHHHHHHHhccc---CCCHHHHHHHHHHHHHhccccC--------CCCCCHHHHHHH-HHHHHHHHHHhcCCHHHHHH
Confidence            33333344444433   4899999999999999653211        245788999998 99999    9999 999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhcccC
Q 036219           94 NFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSSA  148 (149)
Q Consensus        94 N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~~  148 (149)
                      |..+|...|+.|+++++.++|...++.  .|       +|+. .|+.+|+-+|+.
T Consensus        75 ~~~~i~~la~~~vlit~~~v~~~~~~~--~~-------l~~~-~alllGails~T  119 (525)
T TIGR00831        75 NFRPIALIAFLLVVVTTVVVGFSLNWI--LG-------IPLA-LALILGAVLSPT  119 (525)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-------ccHH-HHHHHHHHhCCC
Confidence            999999999999999999999888763  33       3455 899999988763

This model is specific for the bacterial members of this family.

>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]

Probab=98.37  E-value=1.2e-06  Score=77.23  Aligned_cols=121  Identities=18%  Similarity=0.247  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCccccccccccccceeecccccch----h
Q 036219            9 GVGIILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMI----L   84 (149)
Q Consensus         9 s~~ll~~i~lL~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~i~~~~~f~~~iFF~~~LLPPI----G   84 (149)
                      ...++...+++.+....++..++.+   +|+-....+.|++.|........     ....++++.|... .+||+    |
T Consensus         5 ~~~~~~~~lil~l~~~~~~~~~~l~---~~~i~~~ll~g~i~g~~~l~~~~-----~~~~~~~el~~~l-~l~ilLf~~g   75 (429)
T COG0025           5 LMLLFLLLLILLLGLLVSVLAGRLL---LPEIPLLLLLGLLGGPPGLNLIS-----PDLELDPELFLVL-FLAILLFAGG   75 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHHHhhhhhcccc-----ccccCChHHHHHH-HHHHHHHHhH
Confidence            3445555666666666677766555   44555556666666633322221     1245778888887 99999    9


Q ss_pred             hhc-chhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhccc
Q 036219           85 FSW-QKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS  147 (149)
Q Consensus        85 y~l-k~~FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~  147 (149)
                      +++ +|+..||..+|...|..|+++++.++|...|+.  +|      ++|+. +|+.+|+-+|.
T Consensus        76 ~~l~~~~l~~~~~~I~~La~~~v~it~~~~g~~~~~l--~~------~i~~~-~a~l~gAilsp  130 (429)
T COG0025          76 LELDLRELRRVWRSILVLALPLVLITALGIGLLAHWL--LP------GIPLA-AAFLLGAILSP  130 (429)
T ss_pred             hcCCHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hC------ChhHH-HHHHHhHHhcC
Confidence            999 999999999999999999999999999999998  33      35676 99999998763

>PRK05326 potassium/proton antiporter; Reviewed

Probab=96.59  E-value=0.0068  Score=54.90  Aligned_cols=116  Identities=17%  Similarity=0.240  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccCcchhhhhhhhhhhheecc-ccCCccccccccccccceeecccccch----hhh
Q 036219           12 IILQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANI-SNTETNIRYSFSFNELICSSATCLVMI----LFS   86 (149)
Q Consensus        12 ll~~i~lL~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~-~~~~~~i~~~~~f~~~iFF~~~LLPPI----Gy~   86 (149)
                      ++...++++++.+.+...+|.+   +|.-...++.|+++|--... ...++ . +   . .+.+-.. -++.|    |++
T Consensus         8 ll~~~~ll~l~~~~~~l~~r~~---~P~ll~~il~GillGp~~lg~i~~~~-~-~---~-~~~i~~l-~L~~iLF~~Gl~   77 (562)
T PRK05326          8 LLIGALLLLLSILASRLSSRLG---IPSLLLFLAIGMLAGEDGLGGIQFDN-Y-P---L-AYLVGNL-ALAVILFDGGLR   77 (562)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC---CcHHHHHHHHHHHhCccccCCcccCc-H-H---H-HHHHHHH-HHHHHHHcCccC
Confidence            3334455666666677666554   78888889999999863321 11100 0 0   0 1334444 66777    999


Q ss_pred             c-chhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhccc
Q 036219           87 W-QKPFFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS  147 (149)
Q Consensus        87 l-k~~FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~  147 (149)
                      + .+.+.+|..+++..|.+|+++++..+|...+..-  |.       |.. +|+.+|+-+++
T Consensus        78 ~~~~~l~~~~~~~~~la~~gv~~t~~~~g~~~~~l~--g~-------~~~-~alllgai~s~  129 (562)
T PRK05326         78 TRWSSFRPALGPALSLATLGVLITAGLTGLFAHWLL--GL-------DWL-EGLLLGAIVGS  129 (562)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cC-------CHH-HHHHHhhhhcc
Confidence            9 8999999999999999999999999887765442  33       455 89999988775

>TIGR00844 c_cpa1 na(+)/h(+) antiporter

Probab=94.73  E-value=0.097  Score=50.14  Aligned_cols=111  Identities=13%  Similarity=0.147  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHhhccccccCcchhhhhhhhhhhheec-cccCCccccccccccccc---eeecccccch----hhhc-chh
Q 036219           20 VLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALAN-ISNTETNIRYSFSFNELI---CSSATCLVMI----LFSW-QKP   90 (149)
Q Consensus        20 ~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~-~~~~~~~i~~~~~f~~~i---FF~~~LLPPI----Gy~l-k~~   90 (149)
                      ++..++..+++++.  .+|++.+.++.|+++|-... ..++.    + ...+..+   +.-+ .|+.+    |..+ ++.
T Consensus        23 ll~~l~s~~lkeRl--~Ls~~~v~Ll~GiilGP~~l~~idP~----~-~g~~d~i~leIteI-vL~I~LFa~Gl~L~~~~   94 (810)
T TIGR00844        23 SIFSLVSLFVKEKL--YIGESMVASIFGLIVGPHCLNWFNPL----S-WGNTDSITLEISRI-LLCLQVFAVSVELPRKY   94 (810)
T ss_pred             HHHHHHHHHHHhhc--CCcHHHHHHHHHHHhhhhhhccCChh----h-cccchHHHHHHHHH-HHHHHHHHHHHhCCHHH
Confidence            33444556666444  79999999999999997543 22211    0 1111111   3223 45555    9999 999


Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhccc
Q 036219           91 FFSNFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVSS  147 (149)
Q Consensus        91 FF~N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~~  147 (149)
                      ..+|..++...+++|..++..+++...|++- .|       +|+. .|+++|+-+++
T Consensus        95 Lrr~wrsV~rLl~~~M~lT~livAL~a~~Li-~G-------L~~~-~ALLLGAILAP  142 (810)
T TIGR00844        95 MLKHWVSVTMLLVPVMTSGWLVIALFVWILV-PG-------LNFP-ASLLMGACITA  142 (810)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC-------CCHH-HHHHHHhhhcC
Confidence            9999999999999999999999888877652 12       3444 89999988765

This model is specific for the fungal members of this family.

>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ]

Probab=93.25  E-value=0.024  Score=47.93  Aligned_cols=109  Identities=20%  Similarity=0.309  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHhhccccccCcchhhhhhhhhhhheeccccCCccccccccccccceeecccccch----hhhc-chhhhcc
Q 036219           20 VLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANISNTETNIRYSFSFNELICSSATCLVMI----LFSW-QKPFFSN   94 (149)
Q Consensus        20 ~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~~~~~~~i~~~~~f~~~iFF~~~LLPPI----Gy~l-k~~FF~N   94 (149)
                      ..+.+.++..||.|   +|+....++.|++.|......-+++      .-+.+.+... -++.+    |+++ .+.+.||
T Consensus         6 ~~~~~~~~l~~r~~---iP~~i~~i~~Gi~lg~~~~~~~~~~------~~~~~~l~~i-~l~~llF~~G~~~d~~~l~~~   75 (380)
T PF00999_consen    6 LLAFVAGILFRRLG---IPSIIGYILVGIVLGPSGLGLLEPD------NPSFELLAEI-GLAFLLFEAGLELDIKELRRN   75 (380)
T ss_dssp             ---------------------------------------------------S-SSHHH-HS--SSHHHHTTGGGG-----
T ss_pred             ehHHHHHHHHHHhC---CCHHHHHHHheeehhhhhhhhccch------hhHHHHHHHH-HHHHHHHHHHHhhcccccccc
Confidence            33444555444444   8999999999999998765422111      1224556665 77777    9999 8899999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccccchHHHHHhhhhhcc
Q 036219           95 FGAIVTFAIFGTFLASMVMGIPVSV-LFLLCSSFCFWAIPMIWICMWLKFEVS  146 (149)
Q Consensus        95 ~g~Il~fAvlGT~is~~~ig~~~y~-~~~~gl~~~~~~~~~~~~c~~~~~~~~  146 (149)
                      ....+..+..++..+...+|..++. ....|       .|.. +|+++|.-.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~al~l~~~~~  120 (380)
T PF00999_consen   76 WRRALALGLVGFLLPFILVGFLLSFFLFILG-------LSWA-EALLLGAILS  120 (380)
T ss_dssp             ----------------------------------------------TTHHHHT
T ss_pred             cccccccccceeeehhhHHHHHHHHhhccch-------hhhH-HHhhhHHhhh
Confidence            9999999999999999987877774 31222       3454 7777776554

These proteins are found in organisms across all domains of life. In archaea, bacteria, yeast and plants, these exchangers provide increased salt tolerance by removing sodium in exchanger for extracellular protons. In mammals they participate in the regulation of cell pH, volume, and intracellular sodium concentration, as well as for the reabsorption of NaCl across renal, intestinal, and other epithelia [, , , ]. Human NHE is also involved in heart disease, cell growth and in cell differentiation []. The removal of intracellular protons in exchange for extracellular sodium effectively eliminates excess acid from actively metabolising cells. In mammalian cells, NHE activity is found in both the plasma membrane and inner mitochondrial membrane. To date, nine mammalian isoforms have been identified (designated NHE1-NHE9) [, ]. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N terminus and a large cytoplasmic region at the C terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. There is some evidence that the exchangers may exist in the cell membrane as homodimers, but little is currently known about the mechanism of their antiport []. This entry represents a number of cation/proton exchangers, including Na+/H+ exchangers, K+/H+ exchangers and Na+(K+,Li+,Rb+)/H+ exchangers.; GO: 0015299 solute:hydrogen antiporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2L0E_A 2HTG_A 2KBV_A 2E30_B 1Y4E_A.

>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family

Probab=83.79  E-value=1.5  Score=35.68  Aligned_cols=105  Identities=10%  Similarity=0.152  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHhhccccccCcchhhhhhhhhhhheecc-ccCCccccccccccccceeecccccch----hhhc-chhhhc
Q 036219           20 VLSFVLGHVLRRHKFYYLPEASASLLIGLSVGALANI-SNTETNIRYSFSFNELICSSATCLVMI----LFSW-QKPFFS   93 (149)
Q Consensus        20 ~~~~~~~~~l~~~~~~~lpEs~~~il~Gli~G~il~~-~~~~~~i~~~~~f~~~iFF~~~LLPPI----Gy~l-k~~FF~   93 (149)
                      .++.+.+...||.|   +|+....++.|++.|-.... .+++    +....=.++     -+..+    |+.+ .|.+.|
T Consensus         2 ~~a~~~~~l~~~l~---lP~~v~~il~GillGp~~lg~i~~~----~~~~~l~~i-----gl~~llF~~Gl~~d~~~l~~   69 (273)
T TIGR00932         2 LAAVLAVPLSRRLG---IPSVLGYLLAGVLIGPSGLGLISNV----EGVNHLAEF-----GVILLMFLIGLELDLERLWK   69 (273)
T ss_pred             cHHHHHHHHHHHhC---CCHHHHHHHHHHHhCcccccCCCCh----HHHHHHHHH-----HHHHHHHHHHhCCCHHHHHH
Confidence            34556677777654   77888889999999853321 1111    111110111     11222    9999 889999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHhhhhhcc
Q 036219           94 NFGAIVTFAIFGTFLASMVMGIPVSVLFLLCSSFCFWAIPMIWICMWLKFEVS  146 (149)
Q Consensus        94 N~g~Il~fAvlGT~is~~~ig~~~y~~~~~gl~~~~~~~~~~~~c~~~~~~~~  146 (149)
                      |......-|..|.+++++.+|......  .|.       |.. +|+.+|+-++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~-~~~~lg~~ls  112 (273)
T TIGR00932        70 LRKAAFGVGVLQVLVPGVLLGLLLGHL--LGL-------ALG-AAVVIGIILA  112 (273)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC-------CHH-HHHHHHHHHH
Confidence            999999999999999977777644332  233       344 7777776554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	149
1y4e_A	27	Sodium/hydrogen exchanger 1; NHE1 isoform, transme	98.08

>1y4e_A Sodium/hydrogen exchanger 1; NHE1 isoform, transmembrane, membrane protein; HET: HSL; NMR {Homo sapiens}

Probab=98.08  E-value=4.8e-07  Score=50.43  Aligned_cols=21  Identities=10%  Similarity=-0.066  Sum_probs=19.1

Q ss_pred             ccccceeecccccch----hhhc-chh
Q 036219           69 FNELICSSATCLVMI----LFSW-QKP   90 (149)
Q Consensus        69 f~~~iFF~~~LLPPI----Gy~l-k~~   90 (149)
                      |+|++||++ |||||    ||+| +|+
T Consensus         2 ~~~~~FF~~-LLPPII~~aGy~l~~r~   27 (27)
T 1y4e_A            2 LQSDVFFLF-LLPPIILDAGYFLPLRX   27 (27)
T ss_dssp             CCSCSSHHH-HSCCSSHHHHTTGGGGC
T ss_pred             Cccceeeee-ccCccEeeccccccCCC
Confidence            789999999 99999    9999 763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00