Citrus Sinensis ID: 036592
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 519 | 2.2.26 [Sep-21-2011] | |||||||
| Q8W486 | 519 | Uncharacterized protein A | no | no | 0.793 | 0.793 | 0.367 | 5e-70 |
| >sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 | Back alignment and function desciption |
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Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 242/444 (54%), Gaps = 32/444 (7%)
Query: 75 EMWGPRLLKGWPSCFSHNSDLSLAAQFSPLPAKIVLPPKRVYKNNGYLMVSCNGGLNQMR 134
E+W GW + SD P P K + NGYL V CNGGLNQ R
Sbjct: 61 ELWESAKSGGWRPSSAPRSDW-------PPPTK---------ETNGYLRVRCNGGLNQQR 104
Query: 135 AAICDMVAIARYLNVTLIVPELDKTSFWNDPSEFKDIFDVDHFIASLRDEVRILKELPPR 194
+AIC+ V AR +N TL++PELD SFW+D S F+ I+DV+HFI +L+ +V+I+ ++P
Sbjct: 105 SAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDV 164
Query: 195 LKT-RVELGMLYSLPPISWSDISYYHNQILPLLQKHKVVHLNKTDARLANNGLPLEFQKL 253
K + + + + P + I +Y L +++H ++L RLA E+Q+L
Sbjct: 165 HKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRL 224
Query: 254 RCRVNFKALKFTSQIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGCTHGCNIEEVEE 313
RCRVN+ AL+F I +L +V LR +G F+ +HLR+EMDMLAF+GC N EE +
Sbjct: 225 RCRVNYHALRFKPHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKI 284
Query: 314 LTQMRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLTALGIDHNVQIYIAAGEIYGGQ 373
L + R + +++I +E +R G CPLTPEE L+L A+ D++ +IY+AAGE++GG+
Sbjct: 285 LRKYRKEN-FADKRLIYNE-RRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGE 342
Query: 374 RRMAALAEAFPNLVRKETLLKSDLKFFQNHSSQMAALDYLVSLESDIFIPTYDG--NMAK 431
+ M FP L ++ S+ + +A+DY+V L SDIF+PTYDG N A
Sbjct: 343 QFMKPFRTLFPRLDNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFAN 402
Query: 432 VVEGHRRFLGFKKTILLNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDL-MGNPKARVV 490
+ GHR + GF+ TI +R+ L + G + F V+ V + G P RV
Sbjct: 403 NLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRAG--FEEAVRRVMLKTNFGGPHKRV- 459
Query: 491 IPDKPKEEDYFYANP-HECLQQLD 513
+ FY N EC Q++
Sbjct: 460 ------SPESFYTNSWPECFCQMN 477
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Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 519 | ||||||
| 224120708 | 489 | predicted protein [Populus trichocarpa] | 0.930 | 0.987 | 0.834 | 0.0 | |
| 90657544 | 514 | hypothetical protein [Cleome spinosa] | 0.944 | 0.953 | 0.831 | 0.0 | |
| 90657636 | 509 | hypothetical protein [Cleome spinosa] | 0.932 | 0.950 | 0.833 | 0.0 | |
| 255569962 | 502 | conserved hypothetical protein [Ricinus | 0.913 | 0.944 | 0.829 | 0.0 | |
| 224119228 | 501 | predicted protein [Populus trichocarpa] | 0.938 | 0.972 | 0.823 | 0.0 | |
| 298204445 | 520 | unnamed protein product [Vitis vinifera] | 0.951 | 0.95 | 0.799 | 0.0 | |
| 225451838 | 496 | PREDICTED: DUF246 domain-containing prot | 0.951 | 0.995 | 0.799 | 0.0 | |
| 297734110 | 514 | unnamed protein product [Vitis vinifera] | 0.974 | 0.984 | 0.770 | 0.0 | |
| 42567872 | 508 | O-fucosyltransferase family protein [Ara | 0.959 | 0.980 | 0.774 | 0.0 | |
| 297811711 | 505 | hypothetical protein ARALYDRAFT_488418 [ | 0.934 | 0.960 | 0.800 | 0.0 |
| >gi|224120708|ref|XP_002330932.1| predicted protein [Populus trichocarpa] gi|222873126|gb|EEF10257.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/489 (83%), Positives = 448/489 (91%), Gaps = 6/489 (1%)
Query: 32 FNNSKLMKHSSMAVSQSRVKLWMIRAITSILLWTCVVQLMALGEMWGPRLLKGWPSCFSH 91
F K+ K + VS+S +KLWMIRAIT++LLWTCVV L+ALGE+WGPRLLK WPSCFS
Sbjct: 6 FGGGKVDKLKTSVVSRSSMKLWMIRAITTVLLWTCVVHLLALGEIWGPRLLKSWPSCFS- 64
Query: 92 NSDLSLAAQFSPLPAKIVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTL 151
N D A+ + +PAK+VLPPKR+YKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTL
Sbjct: 65 NQD----AELTSVPAKLVLPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTL 120
Query: 152 IVPELDKTSFWNDPSEFKDIFDVDHFIASLRDEVRILKELPPRLKTRVELGMLYSLPPIS 211
+VPELDK+SFWNDPSEF+DIFDVDHFI SLRDEVRILKELPPRLKTRV+LG+ YSLPP+S
Sbjct: 121 VVPELDKSSFWNDPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVKLGLFYSLPPVS 180
Query: 212 WSDISYYHNQILPLLQKHKVVHLNKTDARLANNGLPLEFQKLRCRVNFKALKFTSQIEEL 271
WS+ISYY +QILPLLQK+KVVHLNKTDARLANNGLP+E QKLRCRVNF ALKFTSQIEEL
Sbjct: 181 WSNISYYTHQILPLLQKYKVVHLNKTDARLANNGLPIEIQKLRCRVNFNALKFTSQIEEL 240
Query: 272 GRRVVKILREKGPFLVLHLRYEMDMLAFSGCTHGCNIEEVEELTQMRYAYPWWKEKVINS 331
GRRVV+ILRE+GPFLVLHLRYEMDMLAFSGCTHGCN EE E+LT+MRYAYPWWKEK I+S
Sbjct: 241 GRRVVRILRERGPFLVLHLRYEMDMLAFSGCTHGCNDEETEQLTRMRYAYPWWKEKDISS 300
Query: 332 EMKRKEGLCPLTPEETALVLTALGIDHNVQIYIAAGEIYGGQRRMAALAEAFPNLVRKET 391
EMKRKEGLCPLTPEETALVL+ALGID NVQIY+AAGEIYGG+RRM ALA AFPNLVRKET
Sbjct: 301 EMKRKEGLCPLTPEETALVLSALGIDRNVQIYVAAGEIYGGKRRMEALASAFPNLVRKET 360
Query: 392 LLK-SDLKFFQNHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEGHRRFLGFKKTILLNR 450
LL SDLKFFQNHSSQMAALDYLVSLESDIF+PTY+GNMAKVVEGHRRFLGFKKTI L+R
Sbjct: 361 LLGPSDLKFFQNHSSQMAALDYLVSLESDIFVPTYNGNMAKVVEGHRRFLGFKKTISLDR 420
Query: 451 RQLVDLIDQYNNGSMSWDEFASTVKEVHVDLMGNPKARVVIPDKPKEEDYFYANPHECLQ 510
+ LV LIDQYN GS+SWDEF+STVKE H D MG+PKARVVIPDKPKEEDYFYANP ECLQ
Sbjct: 421 KLLVGLIDQYNKGSLSWDEFSSTVKEAHADRMGSPKARVVIPDKPKEEDYFYANPQECLQ 480
Query: 511 QLDEPLRNT 519
LDEPLR++
Sbjct: 481 LLDEPLRSS 489
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|90657544|gb|ABD96844.1| hypothetical protein [Cleome spinosa] | Back alignment and taxonomy information |
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| >gi|90657636|gb|ABD96934.1| hypothetical protein [Cleome spinosa] | Back alignment and taxonomy information |
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| >gi|255569962|ref|XP_002525944.1| conserved hypothetical protein [Ricinus communis] gi|223534773|gb|EEF36464.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224119228|ref|XP_002331260.1| predicted protein [Populus trichocarpa] gi|222873685|gb|EEF10816.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|298204445|emb|CBI16925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225451838|ref|XP_002278298.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297734110|emb|CBI15357.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|42567872|ref|NP_197078.2| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|66792694|gb|AAY56449.1| At5g15740 [Arabidopsis thaliana] gi|110743719|dbj|BAE99696.1| hypothetical protein [Arabidopsis thaliana] gi|332004817|gb|AED92200.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297811711|ref|XP_002873739.1| hypothetical protein ARALYDRAFT_488418 [Arabidopsis lyrata subsp. lyrata] gi|297319576|gb|EFH49998.1| hypothetical protein ARALYDRAFT_488418 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 519 | ||||||
| TAIR|locus:2143181 | 508 | AT5G15740 [Arabidopsis thalian | 0.959 | 0.980 | 0.774 | 2.6e-214 | |
| TAIR|locus:2076552 | 512 | AT3G02250 [Arabidopsis thalian | 0.942 | 0.955 | 0.762 | 1.4e-206 | |
| TAIR|locus:2014869 | 499 | AT1G14020 [Arabidopsis thalian | 0.886 | 0.921 | 0.638 | 2.7e-162 | |
| TAIR|locus:2056981 | 508 | AT2G03280 [Arabidopsis thalian | 0.668 | 0.683 | 0.614 | 7.5e-148 | |
| TAIR|locus:2065563 | 638 | AT2G37980 [Arabidopsis thalian | 0.755 | 0.614 | 0.513 | 3.2e-104 | |
| TAIR|locus:2157096 | 652 | AT5G35570 [Arabidopsis thalian | 0.745 | 0.593 | 0.502 | 2.7e-100 | |
| TAIR|locus:2080285 | 638 | AT3G54100 [Arabidopsis thalian | 0.757 | 0.615 | 0.487 | 2.4e-99 | |
| TAIR|locus:2150129 | 631 | FRB1 "FRIABLE 1" [Arabidopsis | 0.755 | 0.621 | 0.502 | 2.4e-99 | |
| TAIR|locus:2009467 | 565 | AT1G22460 [Arabidopsis thalian | 0.757 | 0.695 | 0.470 | 1.5e-97 | |
| TAIR|locus:2174754 | 522 | AT5G64600 [Arabidopsis thalian | 0.755 | 0.750 | 0.459 | 1.5e-92 |
| TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2071 (734.1 bits), Expect = 2.6e-214, P = 2.6e-214
Identities = 392/506 (77%), Positives = 440/506 (86%)
Query: 19 CELQEYLM-----TMGLKF-NNSKLMKHSSMAVSQSRVKLWMIRAITSILLWTCVVQLMA 72
C+++++L M +K SK+ K + VS+ R+ LWMIRA+T +LLW+C V LMA
Sbjct: 2 CKMEKFLYHRKLWEMNVKLLGESKVEKLKNSFVSRPRMSLWMIRAVTVLLLWSCFVHLMA 61
Query: 73 LGEMWGPRLLKGWPSCFSHNSDLSLAAQFSPLPAKIVLPPKRVYKNNGYLMVSCNGGLNQ 132
LGEMWGPRL KGWPSCF+H+ LS AA+ + LP KI LPPKRVY NNGYLMVSCNGGLNQ
Sbjct: 62 LGEMWGPRLFKGWPSCFNHHQ-LSTAAEMTSLPTKIALPPKRVYVNNGYLMVSCNGGLNQ 120
Query: 133 MRAAICDMVAIARYLNVTLIVPELDKTSFWNDPSEFKDIFDVDHFIASLRDEVRILKELP 192
MRAAICDMV +ARY+NVTLIVPELDKTSFWNDPSEFKDIFDVDHFI+SLRDEVRILKELP
Sbjct: 121 MRAAICDMVTVARYMNVTLIVPELDKTSFWNDPSEFKDIFDVDHFISSLRDEVRILKELP 180
Query: 193 PRLKTRVELGMLYSLPPISWSDISYYHNQILPLLQKHKVVHLNKTDARLANNGLPLEFQK 252
PRLK RVELG+ + +PPISWS++SYY NQILPL++KHKV+HLN+TD RLANNGLP+E QK
Sbjct: 181 PRLKKRVELGVYHEMPPISWSNMSYYQNQILPLVKKHKVLHLNRTDTRLANNGLPVEVQK 240
Query: 253 LRCRVNFKALKFTSQIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGCTHGCNIEEVE 312
LRCRVNF LKFT QIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGC+HGCN EE E
Sbjct: 241 LRCRVNFNGLKFTPQIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGCSHGCNPEEEE 300
Query: 313 ELTQMRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLTALGIDHNVQIYIAAGEIYGG 372
ELT+MRYAYPWWKEKVINSE+KRK+GLCPLTPEETAL LTALGID NVQIYIAAGEIYGG
Sbjct: 301 ELTRMRYAYPWWKEKVINSELKRKDGLCPLTPEETALTLTALGIDRNVQIYIAAGEIYGG 360
Query: 373 QRRMAALAEAFPNLVRKETLLKS-DLKFFQNHSSQMAALDYLVSLESDIFIPTYDGNMAK 431
QRRM AL +AFPN+VRKETLL+S DL F +NHSSQMAALDYLV+LESDIF+PT DGNMA+
Sbjct: 361 QRRMKALTDAFPNVVRKETLLESSDLDFCRNHSSQMAALDYLVALESDIFVPTNDGNMAR 420
Query: 432 VVEGHRRFLGFKKTILLNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDLMGNPKARVVI 491
VVEGHRRFLGFKKTI LNRR LV LID+Y G +SWD F+STVK H MG+PK R+VI
Sbjct: 421 VVEGHRRFLGFKKTIQLNRRFLVKLIDEYTEGLLSWDVFSSTVKAFHSTRMGSPKRRLVI 480
Query: 492 PDKPKEEDYFYANPHECLQQLDEPLR 517
P++PKEEDYFYANP ECLQ LDEPLR
Sbjct: 481 PNRPKEEDYFYANPQECLQLLDEPLR 506
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| TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pg.C_scaffold_155000043 | hypothetical protein (489 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 519 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-162 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 1e-125 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 5e-08 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 460 bits (1187), Expect = e-162
Identities = 173/327 (52%), Positives = 214/327 (65%), Gaps = 39/327 (11%)
Query: 121 YLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWNDPSEFKDIFDVDHFIAS 180
YL+VS NGGLNQ R+ ICD VA+AR LN TL++PELDK S W D S+F DI+DVDHFI S
Sbjct: 1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60
Query: 181 LRDEVRILKELPPRLKTRVELGMLYSLPPISWSDISYYHNQILPLLQKHKVVHLNKTDAR 240
L+D+VR++K+LP L ++ + S S SYY ++LPLL+KH V+ L D+R
Sbjct: 61 LKDDVRVVKKLPEELASKKPE--ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSR 118
Query: 241 LANNGLPLEFQKLRCRVNFKALKFTSQIEELGRRVVKILREK-GPFLVLHLRYEMDMLAF 299
LAN+ LP E Q+LRCRVNF AL+F +IEELG ++V LRE GPFL LHLR+E DMLAF
Sbjct: 119 LANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAF 178
Query: 300 SGCTHGCNIEEVEELTQMRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLTALGIDHN 359
SGC G CPLTPEE L+L ALG +
Sbjct: 179 SGC-----------------------------------GKCPLTPEEVGLLLRALGFPRS 203
Query: 360 VQIYIAAGEIYGGQRRMAALAEAFPNLVRKETLL-KSDLKFFQNHSSQMAALDYLVSLES 418
+IY+AAGEIYGG+RR+ L FPNL KETL +L F HSS++AALDY+V LES
Sbjct: 204 TRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLES 263
Query: 419 DIFIPTYDGNMAKVVEGHRRFLGFKKT 445
D+F+PTY GN AK V GHRR+LG +KT
Sbjct: 264 DVFVPTYGGNFAKAVAGHRRYLGHRKT 290
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Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
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| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 519 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 98.32 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 97.1 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-57 Score=451.78 Aligned_cols=300 Identities=35% Similarity=0.630 Sum_probs=209.1
Q ss_pred EecCcchhhHHHHhHHHHHHHHhCCcEEecccCCCCccCCCCC-----CCccccHHHHHHhcccccEEeccCChhhhhhh
Q 036592 125 SCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWNDPSE-----FKDIFDVDHFIASLRDEVRILKELPPRLKTRV 199 (519)
Q Consensus 125 ~~nGGLNQqR~~IcDaVavARlLNATLViP~L~~~s~W~D~S~-----F~DIFDvdhFI~sL~~dVrIVk~LP~~~~~~~ 199 (519)
.+.||+||||+++++||++|++||+|||||.+...+.|++.++ |+++||++||++.++++|++.+.+|.......
T Consensus 5 p~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~ 84 (351)
T PF10250_consen 5 PCMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVF 84 (351)
T ss_dssp --SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhcccc
Confidence 3899999999999999999999999999999999999999987 99999999999999999999998876554421
Q ss_pred hc---------------------------CcccccCCCC-cCChhHHHhhchhhhccc------eeEEEcccCcccccCC
Q 036592 200 EL---------------------------GMLYSLPPIS-WSDISYYHNQILPLLQKH------KVVHLNKTDARLANNG 245 (519)
Q Consensus 200 ~~---------------------------~~~~~~~p~~-ws~~~yY~~~vlP~l~k~------~Vi~l~~~d~RLa~d~ 245 (519)
.. ....+..+.. |+.+.+|.++++|.+.++ +++.|.++..++..+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 164 (351)
T PF10250_consen 85 RLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNY 164 (351)
T ss_dssp -EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--G
T ss_pred chhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcc
Confidence 11 0112222222 788889999999999886 9999999999999988
Q ss_pred CChhhhhhhhhhcccccccchHHHHHHHHHHHHHH-hcCCeEEEeccchhhhHhhhcCCCCCChHHHHHHHHHHhhCccc
Q 036592 246 LPLEFQKLRCRVNFKALKFTSQIEELGRRVVKILR-EKGPFLVLHLRYEMDMLAFSGCTHGCNIEEVEELTQMRYAYPWW 324 (519)
Q Consensus 246 lP~eiQrLRCrvnf~ALrF~~~I~~lg~~lV~RLr-~~G~fiALHLR~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~w 324 (519)
++.++|| +|+|+++|+++|+++++++. ..++|||+|||+|+|| +++|.+++ +...|+.+|. |
T Consensus 165 ~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~----~ 227 (351)
T PF10250_consen 165 LDRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRC----W 227 (351)
T ss_dssp GGGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHH----H
T ss_pred cCccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHh----h
Confidence 8999987 99999999999999999999 7899999999999999 89999955 5666777775 3
Q ss_pred ccccCChHHHhhCCCCCCCHHHHHHHHHHcCCCCCceEEEEeccccCcccchhHHHHhCCccccccccc-hhhhhhhhcc
Q 036592 325 KEKVINSEMKRKEGLCPLTPEETALVLTALGIDHNVQIYIAAGEIYGGQRRMAALAEAFPNLVRKETLL-KSDLKFFQNH 403 (519)
Q Consensus 325 k~k~i~~~~~R~~G~CPLTPeEvgl~L~alGf~~~T~IYlAsgeiyGGe~~l~~Lr~~FPnl~tKe~L~-~eEL~pf~~~ 403 (519)
.++.+++...|..|.||++|++++.+++++|+.+.|.||||++++|||.+.|++|++.||++++|+++. .+|+++|.+
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~- 306 (351)
T PF10250_consen 228 GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND- 306 (351)
T ss_dssp -GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S------
T ss_pred ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc-
Confidence 566788888999999999999999999999999999999999999999999999999999999999999 899998877
Q ss_pred chhhhhhhhhhhccCcccccCCCCchhhhhhHhhhhcCCc
Q 036592 404 SSQMAALDYLVSLESDIFIPTYDGNMAKVVEGHRRFLGFK 443 (519)
Q Consensus 404 ss~~AALDY~Vcl~SDvFV~t~~GNfa~~V~GhR~y~G~~ 443 (519)
.++|+||++||++||+||+|..++|+.+|+++|+|.|+.
T Consensus 307 -~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~ 345 (351)
T PF10250_consen 307 -DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKP 345 (351)
T ss_dssp -S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred -cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCC
Confidence 899999999999999999999888999999999999965
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 2e-08
Identities = 71/428 (16%), Positives = 130/428 (30%), Gaps = 137/428 (32%)
Query: 154 PELDKTSF-------WNDPSEFKDIFDV--DHFIASLRDEVRILKELPPRLKTRVELGML 204
P + + +ND F ++V LR + L EL P ++ G+L
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAK-YNVSRLQPYLKLR---QALLELRPAKNVLID-GVL 159
Query: 205 --------------YSLP-----PISWSDISYYHNQILPLLQKHKVVHLNKTDARLANNG 245
Y + I W ++ ++ L L K ++ N
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM------LQKLLYQIDPNW 213
Query: 246 LPLEFQKLRCRVNFKALKFTSQIEELGRRVVKILREKGPFLVL-HLRYEMDMLAFSGCTH 304
++ +++ EL RR++K + LVL +++ AF+
Sbjct: 214 TSRSDHSSNIKLRIHSIQ-----AEL-RRLLKSKPYENCLLVLLNVQNAKAWNAFN---L 264
Query: 305 GCNIEEVEELTQMRYAYPWWKEKVIN-------SEMKRKEGLCPLTPEET-ALVLTALGI 356
C I L R+ +V + + + LTP+E +L+L L
Sbjct: 265 SCKI-----LLTTRFK------QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 357 D-----------HNVQIYIAAGEIYGGQRRMAALAEAFP--NLVRKETLLKSDLKFFQNH 403
+ ++ I A I R A + + N + T+++S L +
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESI----RDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 404 SSQMAALDYLVSLESDIFIPT-----------YDGNMAKVVEGHRRFLGFKK-------- 444
+ D L IPT M V + H+ L K+
Sbjct: 370 EYR-KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 445 -TILLNRRQLVD--------LIDQYN-NGSMSWDEFASTVKEVHVDLMGNPKARVVIPDK 494
+I L + ++ ++D YN + D+
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI----------------------P 466
Query: 495 PKEEDYFY 502
P + YFY
Sbjct: 467 PYLDQYFY 474
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 519 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.6 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 99.31 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 97.87 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 97.86 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=150.39 Aligned_cols=298 Identities=14% Similarity=0.239 Sum_probs=165.5
Q ss_pred cCCcEEEEEe-cC-cchhhHHHHhHHHHHHHHhCCc----EEecccCCCCccCCC------CCCCccccHHHHHHhcccc
Q 036592 117 KNNGYLMVSC-NG-GLNQMRAAICDMVAIARYLNVT----LIVPELDKTSFWNDP------SEFKDIFDVDHFIASLRDE 184 (519)
Q Consensus 117 ~snGYl~V~~-nG-GLNQqR~~IcDaVavARlLNAT----LViP~L~~~s~W~D~------S~F~DIFDvdhFI~sL~~d 184 (519)
..++||+-.. .| |.|+||...-.|.++|+.||.| ||||-...-.-|+.+ -.|++.||++++ +..
T Consensus 20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~ 95 (408)
T 4ap5_A 20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN 95 (408)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence 5689999864 56 8999999999999999999999 999966433345332 379999999875 345
Q ss_pred cEEeccCChhhhhhhh---------------------------cCcccccCC------CCcCChhHHHh-----------
Q 036592 185 VRILKELPPRLKTRVE---------------------------LGMLYSLPP------ISWSDISYYHN----------- 220 (519)
Q Consensus 185 VrIVk~LP~~~~~~~~---------------------------~~~~~~~~p------~~ws~~~yY~~----------- 220 (519)
|+|+.- +++.+... ........+ ..+..+.|-..
T Consensus 96 vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~ 173 (408)
T 4ap5_A 96 IPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLS 173 (408)
T ss_dssp SCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEE
T ss_pred CCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEE
Confidence 555522 11111100 000000000 00000000000
Q ss_pred ------hchhhhccc---eeEEEcccCcccccCCCChhhhhhhhhhcccccccchHHHHHHHHHHHHHHhcCCeEEEecc
Q 036592 221 ------QILPLLQKH---KVVHLNKTDARLANNGLPLEFQKLRCRVNFKALKFTSQIEELGRRVVKILREKGPFLVLHLR 291 (519)
Q Consensus 221 ------~vlP~l~k~---~Vi~l~~~d~RLa~d~lP~eiQrLRCrvnf~ALrF~~~I~~lg~~lV~RLr~~G~fiALHLR 291 (519)
.+-|.+.+. .-+-+..+...|+.---..+...+| ..|+|.+.|.+.|++.++..- .++|+++|+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r 247 (408)
T 4ap5_A 174 VQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHL-NSTDDADRIP 247 (408)
T ss_dssp ECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCC
T ss_pred EeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHh-Ccccceeecc
Confidence 011112111 1111112222221110111222221 479999999999999988765 3678888888
Q ss_pred chhhhHhhhcCCCCCChHHHHHHHHHHhhCcccccccCChHHHhhCC-CCCCCHHHHHHHHHHcCCCCCceEEEEecccc
Q 036592 292 YEMDMLAFSGCTHGCNIEEVEELTQMRYAYPWWKEKVINSEMKRKEG-LCPLTPEETALVLTALGIDHNVQIYIAAGEIY 370 (519)
Q Consensus 292 ~E~DMlAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R~~G-~CPLTPeEvgl~L~alGf~~~T~IYlAsgeiy 370 (519)
...|+... |.......-. -+.-.+|+... ...... .+|-.++-+..+.+.+-=-+.+.||||+-+.
T Consensus 248 ~~~dw~~~--~~~~~~~~~~------~y~~~H~Rr~d----~~~~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~- 314 (408)
T 4ap5_A 248 FQEDWMKM--KVKLGSALGG------PYLGVHLRRKD----FIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAV- 314 (408)
T ss_dssp CCSSGGGC--CCCTTCBCCE------EEEEEEECCTT----TTTTTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECCC-
T ss_pred cchhHhhh--hcccccccCC------Ccccccccccc----chhhhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCCc-
Confidence 88877664 4331110000 00001222110 001111 2333322222333333222445899998653
Q ss_pred CcccchhHHHHhCCccccccccchhhhhhhhccchhhhhhhhhhhccCcccccCCCCchhhhhhHhhhhcCCcc
Q 036592 371 GGQRRMAALAEAFPNLVRKETLLKSDLKFFQNHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEGHRRFLGFKK 444 (519)
Q Consensus 371 GGe~~l~~Lr~~FPnl~tKe~L~~eEL~pf~~~ss~~AALDY~Vcl~SDvFV~t~~GNfa~~V~GhR~y~G~~k 444 (519)
+..+..|++.+|.++.-..- .+++..+ ...+.|.||-+||.+||+||+|..++|+..|.-.|.+.|+..
T Consensus 315 --~~~~~~l~~~~~~~~~~~~~-~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 315 --RKEYEELKKLLPEMVRFEPT-WEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp --HHHHHHHHHHCTTEECCCCC-HHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred --hhHHHHHHHhCCCcEEecCc-chhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence 44578899999986543222 3334443 234679999999999999999999999999999999999763
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00