Citrus Sinensis ID: 036719

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-
MLAIGSPNYSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRANGNGSMTPTPRRYSIGSGTPELLTPRSYSSRQNGHFREMRRLSTAPLNFVAISKEDTMSSYTSVCGSEPGSPPQG
ccccccccccccHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccc
mlaigspnysvrtSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGElnihspiqtekRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGeisgydhlsnslinslsleeedlSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVlgldfgqtvsdvhpslhgtamghstnisnstLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELwnlmdspiqdknsFSKITSILRlseseitepgvlSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMthiepdtstaaeksnamidsglvdpseLLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYnqddnrynagrgahinlKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKMQDLLLTEKeaiygskpsprksnsfrkpngcrangngsmtptprrysigsgtpelltprsyssrqnghfremrrlstaplnfvaiskedtmssytsvcgsepgsppqg
mlaigspnysvrTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNihspiqtekrstslkeklasiaplvedlrtkkEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRITECQThlrtlqkeksdRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLmdspiqdknsFSKITSILRlseseitepgvlstevieqasteverltklkatrmkelvlkkrseLEEICKMthiepdtstaaeKSNAMIDSGLVDPSELLANIEAQivkvkdealsrkdiMDRIDRWLYACEEEKWLeeynqddnrynagrgahinlkraerarvtvskipaivdnlinrtlaweEEKKIFflydgvrlvsilddykltrvqreeekkryrdqkkmqdllltekeaiygskpsprksnsfrkpngcrangngsmtptprrysigsgtpelltprsyssrqnghfremrrlstapLNFVAISKEDTMSSYTsvcgsepgsppqg
MLAIGSPNYSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYDHlsnslinslsleeedlslRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRANGNGSMTPTPRRYSIGSGTPELLTPRSYSSRQNGHFREMRRLSTAPLNFVAISKEDTMSSYTSVCGSEPGSPPQG
**************TSCNALLRELQQIWSDIGES**EKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNI****************************************IKAQIEKISGEISGYDHLSNSLINSLSL***DLSLRRITECQTHLRTLQK**SDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRL******************************************************************************LLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRV***********************************************************************************************FV*************************
***************SCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEE*******************************************LKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGE***************************TECQ**************NRVLEYVNEVHSICGVLGLDFGQT*******************SNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSK**********************IEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKW************************************IVDNLINRTLAWEEEKKIFFLYDGVRLVSI***********************************************************************************************************************************
MLAIGSPNYSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQ***********KKMQDLLLTEKEAIYGS**********RKPNGCRANGNGSMTPTPRRYSIGSGTPELLTPRSYSSRQNGHFREMRRLSTAPLNFVAISKEDTM*****************
***********RTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNIHS*******STSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGY********NSLSLEEEDLSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHG*****STNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKMQDLLLTEKEAIY**************************************************************STAPLN*****K*********************
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MLAIGSPNYSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECxxxxxxxxxxxxxxxxxxxxxxxxxxxxLATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSIxxxxxxxxxxxxxxxxxxxxxKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRANGNGSMTPTPRRYSIGSGTPELLTPRSYSSRQNGHFREMRRLSTAPLNFVAISKEDTMSSYTSVCGSEPGSPPQG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query601 2.2.26 [Sep-21-2011]
Q9SIS3608 65-kDa microtubule-associ yes no 1.0 0.988 0.723 0.0
Q8L836603 65-kDa microtubule-associ no no 0.991 0.988 0.676 0.0
Q9FLP0587 65-kDa microtubule-associ no no 0.950 0.972 0.471 1e-146
Q8LEG3578 65-kDa microtubule-associ no no 0.911 0.948 0.461 1e-140
Q9FHM4 707 65-kDa microtubule-associ no no 0.881 0.749 0.451 1e-121
Q9LZY0677 65-kDa microtubule-associ no no 0.858 0.762 0.437 1e-120
Q9ZVJ3550 65-kDa microtubule-associ no no 0.895 0.978 0.420 1e-116
Q9C7G0562 65-kDa microtubule-associ no no 0.865 0.925 0.406 1e-114
Q4PSA3549 65-kDa microtubule-associ no no 0.878 0.961 0.4 4e-96
O43663620 Protein regulator of cyto yes no 0.772 0.748 0.229 4e-13
>sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana GN=MAP65-6 PE=1 SV=1 Back     alignment and function desciption
 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/608 (72%), Positives = 528/608 (86%), Gaps = 7/608 (1%)

Query: 1   MLAIGSPN-YSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEE 59
           ML IGSPN    RT+T+CN LLRELQ+IW +IGE+E EKDR+LMELERECL++Y+RKV+E
Sbjct: 1   MLEIGSPNALFFRTNTTCNNLLRELQKIWVEIGETETEKDRMLMELERECLQIYQRKVDE 60

Query: 60  AANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRT 119
           AAN+KA+LHQ+VA+ EAE+A+LMAALG LNI+SPI+ +K S SLKEKLA++ PLVE+LR 
Sbjct: 61  AANSKAKLHQSVASIEAEVASLMAALGVLNINSPIKLDKGSKSLKEKLAAVTPLVEELRI 120

Query: 120 KKEERMKQFADIKAQIEKISGEISGY-DHLSNSLINSLSLEEEDLSLRRITECQTHLRTL 178
           +KEERMKQF+DIKAQIEKISGEISGY DHL+ ++  SL+LEE+DL+LR + E QTHLRTL
Sbjct: 121 QKEERMKQFSDIKAQIEKISGEISGYSDHLNKAMNISLTLEEQDLTLRNLNEYQTHLRTL 180

Query: 179 QKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLE 238
           QKEKSDRLN+VL YVNEVH++CGVLG+DF QTVS VHPSLH T    STNIS+STLEGLE
Sbjct: 181 QKEKSDRLNKVLGYVNEVHALCGVLGVDFSQTVSAVHPSLHRTDQEQSTNISDSTLEGLE 240

Query: 239 HAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGV 298
           H I KLK ERK R QKLKD+V SLFELWNLMD+P +D+  F K+T ++R SE+ ITEPG+
Sbjct: 241 HMIQKLKTERKSRFQKLKDVVASLFELWNLMDTPQEDRTKFGKVTYVVRSSEANITEPGI 300

Query: 299 LSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMID 358
           LSTE IEQ STEV+ L+KLKA+RMKELV+K+RSELE++C++THI+PDTST+AEKS A+ID
Sbjct: 301 LSTETIEQVSTEVDSLSKLKASRMKELVMKRRSELEDLCRLTHIQPDTSTSAEKSTALID 360

Query: 359 SGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAG 418
           SGLVDPSELLANIE QI K+KDEA SRKDIMDRIDRWL ACEEE WLEEYN D+NRY+AG
Sbjct: 361 SGLVDPSELLANIEMQINKIKDEAQSRKDIMDRIDRWLSACEEENWLEEYNLDENRYSAG 420

Query: 419 RGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTR 478
           RG H+NLKRAERARVT++KIP +VD LI +TL WEE+ +  FLYDGVRLV+IL+DYKLTR
Sbjct: 421 RGGHVNLKRAERARVTINKIPGMVDTLIKKTLVWEEDMQKSFLYDGVRLVNILEDYKLTR 480

Query: 479 VQREEEKKRYRDQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCR-ANGNGSMTPTPR 537
            Q+EEEKKRYRDQKK QDLLLT++E+IYGSKPSPR+S+SFRKPNG   +NGNGS+ PTPR
Sbjct: 481 KQQEEEKKRYRDQKKRQDLLLTQRESIYGSKPSPRRSSSFRKPNGFNISNGNGSVPPTPR 540

Query: 538 RYSIGSGTPE-LLTPRSYSS--RQNGHFREMRRLSTAPLNFVAISKEDTMS-SYTSVCGS 593
           R S+G+ TP+ LLTPRSYS   RQNG+F+E+RRLST PLN+VA+ KEDT+S +YTS+  S
Sbjct: 541 RGSVGTTTPDVLLTPRSYSGHHRQNGYFKEVRRLSTTPLNYVAMQKEDTVSTTYTSIYSS 600

Query: 594 EPGSPPQG 601
           EP SP QG
Sbjct: 601 EPDSPLQG 608
Microtubule-associated protein that mediates the formation of a mesh-like stable and dense network formed by individual microtubules (MT). Confers MT resistance to high concentration of NaCl.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8L836|MA657_ARATH 65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana GN=MAP65-7 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LEG3|MA652_ARATH 65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana GN=MAP65-2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZY0|MA654_ARATH 65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZVJ3|MA655_ARATH 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2 Back     alignment and function description
>sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2 Back     alignment and function description
>sp|Q4PSA3|MA659_ARATH 65-kDa microtubule-associated protein 9 OS=Arabidopsis thaliana GN=MAP65-9 PE=2 SV=1 Back     alignment and function description
>sp|O43663|PRC1_HUMAN Protein regulator of cytokinesis 1 OS=Homo sapiens GN=PRC1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query601
255561807600 PLE, putative [Ricinus communis] gi|2235 0.998 1.0 0.838 0.0
449521840600 PREDICTED: 65-kDa microtubule-associated 0.993 0.995 0.802 0.0
449464864600 PREDICTED: 65-kDa microtubule-associated 0.993 0.995 0.802 0.0
356575136601 PREDICTED: 65-kDa microtubule-associated 0.996 0.996 0.772 0.0
356532251601 PREDICTED: 65-kDa microtubule-associated 0.996 0.996 0.763 0.0
225424474599 PREDICTED: 65-kDa microtubule-associated 0.995 0.998 0.796 0.0
147827064601 hypothetical protein VITISV_016187 [Viti 0.973 0.973 0.757 0.0
357438951608 hypothetical protein MTR_1g038840 [Medic 0.993 0.981 0.734 0.0
79549632608 microtubule-associated protein 6 [Arabid 1.0 0.988 0.723 0.0
297814432608 atmap65-6 [Arabidopsis lyrata subsp. lyr 1.0 0.988 0.717 0.0
>gi|255561807|ref|XP_002521913.1| PLE, putative [Ricinus communis] gi|223538951|gb|EEF40549.1| PLE, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1026 bits (2654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/601 (83%), Positives = 557/601 (92%), Gaps = 1/601 (0%)

Query: 1   MLAIGSPNYSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEA 60
           MLAIGSP  SVRTSTSCNALLRELQQIW+DIGE+EAEKDR+L+ELERECLEVYRRKVEEA
Sbjct: 1   MLAIGSPTISVRTSTSCNALLRELQQIWNDIGETEAEKDRMLLELERECLEVYRRKVEEA 60

Query: 61  ANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRTK 120
           ANAKARLHQ+VAAKEAELATLMAALGEL+IHSP QTEKR++SLK+KLAS+ PLVEDLRTK
Sbjct: 61  ANAKARLHQSVAAKEAELATLMAALGELSIHSPTQTEKRASSLKQKLASVTPLVEDLRTK 120

Query: 121 KEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRITECQTHLRTLQK 180
           KEERMKQFADIKAQIEKISGEISGY++L++SLI+S SLE++DLSLR++ E QTHLRTLQK
Sbjct: 121 KEERMKQFADIKAQIEKISGEISGYNNLNSSLISSFSLEDQDLSLRKLNEYQTHLRTLQK 180

Query: 181 EKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHA 240
           EKSDRL++V E++NEVHS+CGVLGLDFGQTVSDVHPSLHG     STNISNSTLEGLE A
Sbjct: 181 EKSDRLHKVFEFINEVHSLCGVLGLDFGQTVSDVHPSLHGVNQEQSTNISNSTLEGLEQA 240

Query: 241 IVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLS 300
           IVKLK ERK RIQKLKDIV SLFELWNLMDSP +DKNSFS+ITSIL  SESEI EPGVLS
Sbjct: 241 IVKLKLERKARIQKLKDIVSSLFELWNLMDSPKEDKNSFSRITSILGSSESEIIEPGVLS 300

Query: 301 TEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMIDSG 360
            E+IEQAS EVERL KLKA+RMKELV+K+RSELE+IC+MTHIEPDTSTAAEKSNA+IDSG
Sbjct: 301 IEIIEQASAEVERLMKLKASRMKELVMKRRSELEDICRMTHIEPDTSTAAEKSNALIDSG 360

Query: 361 LVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRG 420
            VDPSELLA+IEAQIV+ K+EA+SRK++MDRIDRWL ACEEE WLEEYNQD  RY+AGRG
Sbjct: 361 FVDPSELLASIEAQIVRAKEEAMSRKEVMDRIDRWLSACEEENWLEEYNQDSTRYSAGRG 420

Query: 421 AHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQ 480
           AHINLKRAERAR+TVSKIPA+VDNLI++TLAWEEE K  FLYDGVRLV+ILDDYKL R Q
Sbjct: 421 AHINLKRAERARITVSKIPAMVDNLISKTLAWEEENKTLFLYDGVRLVTILDDYKLARHQ 480

Query: 481 REEEKKRYRDQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRANGNGSMTPTPRRYS 540
           REEEKKRYRDQKK+QDLLLTEKE +YGSKPSPRK+NSFRK NG RANGNGSMTPTPRR S
Sbjct: 481 REEEKKRYRDQKKLQDLLLTEKELMYGSKPSPRKTNSFRKSNGYRANGNGSMTPTPRRNS 540

Query: 541 IGSGTPELLTPRSYSSRQNGHFREMRRLSTAPLNFVAISKEDTMSSYTSVCGSEPGSPPQ 600
           +G  TPELLTPRSYS RQNG+F+EMRRLSTAPLNFVAISKE+TM S+ SVCGSEPGSPPQ
Sbjct: 541 VGGATPELLTPRSYSGRQNGYFKEMRRLSTAPLNFVAISKEETM-SFASVCGSEPGSPPQ 599

Query: 601 G 601
           G
Sbjct: 600 G 600

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449521840|ref|XP_004167937.1| PREDICTED: 65-kDa microtubule-associated protein 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449464864|ref|XP_004150149.1| PREDICTED: 65-kDa microtubule-associated protein 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356575136|ref|XP_003555698.1| PREDICTED: 65-kDa microtubule-associated protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|356532251|ref|XP_003534687.1| PREDICTED: 65-kDa microtubule-associated protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|225424474|ref|XP_002281677.1| PREDICTED: 65-kDa microtubule-associated protein 6 [Vitis vinifera] gi|297737577|emb|CBI26778.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147827064|emb|CAN64202.1| hypothetical protein VITISV_016187 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357438951|ref|XP_003589752.1| hypothetical protein MTR_1g038840 [Medicago truncatula] gi|355478800|gb|AES60003.1| hypothetical protein MTR_1g038840 [Medicago truncatula] Back     alignment and taxonomy information
>gi|79549632|ref|NP_178300.3| microtubule-associated protein 6 [Arabidopsis thaliana] gi|75206162|sp|Q9SIS3.1|MA656_ARATH RecName: Full=65-kDa microtubule-associated protein 6; Short=AtMAP65-6 gi|4522009|gb|AAD21782.1| unknown protein [Arabidopsis thaliana] gi|222424469|dbj|BAH20190.1| AT2G01910 [Arabidopsis thaliana] gi|330250422|gb|AEC05516.1| microtubule-associated protein 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297814432|ref|XP_002875099.1| atmap65-6 [Arabidopsis lyrata subsp. lyrata] gi|297320937|gb|EFH51358.1| atmap65-6 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query601
TAIR|locus:2059713608 ATMAP65-6 [Arabidopsis thalian 1.0 0.988 0.708 7e-228
TAIR|locus:2006737603 MAP65-7 "AT1G14690" [Arabidops 0.991 0.988 0.662 1.8e-213
TAIR|locus:2116267578 MAP65-2 "AT4G26760" [Arabidops 0.911 0.948 0.454 5.3e-127
TAIR|locus:2153152 707 PLE "AT5G51600" [Arabidopsis t 0.895 0.760 0.437 6.5e-122
TAIR|locus:2167978549 MAP65-9 "microtubule-associate 0.871 0.954 0.399 1.4e-101
UNIPROTKB|F1NGV8607 PRC1 "Uncharacterized protein" 0.356 0.352 0.282 2.5e-15
MGI|MGI:1858961603 Prc1 "protein regulator of cyt 0.359 0.358 0.250 2.7e-15
UNIPROTKB|F8W9B5566 PRC1 "Protein regulator of cyt 0.322 0.342 0.270 9.3e-15
RGD|1311754606 Prc1 "protein regulator of cyt 0.362 0.359 0.237 1.1e-14
UNIPROTKB|H9KV59606 PRC1 "Protein regulator of cyt 0.322 0.320 0.270 1.2e-14
TAIR|locus:2059713 ATMAP65-6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2199 (779.1 bits), Expect = 7.0e-228, P = 7.0e-228
 Identities = 431/608 (70%), Positives = 513/608 (84%)

Query:     1 MLAIGSPN-YSVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEE 59
             ML IGSPN    RT+T+CN LLRELQ+IW +IGE+E EKDR+LMELERECL++Y+RKV+E
Sbjct:     1 MLEIGSPNALFFRTNTTCNNLLRELQKIWVEIGETETEKDRMLMELERECLQIYQRKVDE 60

Query:    60 AANAKARLHQTVAAKEAELATLMAALGELNIHSPIQTEKRSTSLKEKLASIAPLVEDLRT 119
             AAN+KA+LHQ+VA+ EAE+A+LMAALG LNI+SPI+ +K S SLKEKLA++ PLVE+LR 
Sbjct:    61 AANSKAKLHQSVASIEAEVASLMAALGVLNINSPIKLDKGSKSLKEKLAAVTPLVEELRI 120

Query:   120 KKEERMKQFADIKAQIEKISGEISGY-DHXXXXXXXXXXXXXXXXXXRRITECQTHLRTL 178
             +KEERMKQF+DIKAQIEKISGEISGY DH                  R + E QTHLRTL
Sbjct:   121 QKEERMKQFSDIKAQIEKISGEISGYSDHLNKAMNISLTLEEQDLTLRNLNEYQTHLRTL 180

Query:   179 QKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLE 238
             QKEKSDRLN+VL YVNEVH++CGVLG+DF QTVS VHPSLH T    STNIS+STLEGLE
Sbjct:   181 QKEKSDRLNKVLGYVNEVHALCGVLGVDFSQTVSAVHPSLHRTDQEQSTNISDSTLEGLE 240

Query:   239 HAIVKLKAERKIRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGV 298
             H I KLK ERK R QKLKD+V SLFELWNLMD+P +D+  F K+T ++R SE+ ITEPG+
Sbjct:   241 HMIQKLKTERKSRFQKLKDVVASLFELWNLMDTPQEDRTKFGKVTYVVRSSEANITEPGI 300

Query:   299 LSTEVIEQASTEVERLTKLKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKSNAMID 358
             LSTE IEQ STEV+ L+KLKA+RMKELV+K+RSELE++C++THI+PDTST+AEKS A+ID
Sbjct:   301 LSTETIEQVSTEVDSLSKLKASRMKELVMKRRSELEDLCRLTHIQPDTSTSAEKSTALID 360

Query:   359 SGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAG 418
             SGLVDPSELLANIE QI K+KDEA SRKDIMDRIDRWL ACEEE WLEEYN D+NRY+AG
Sbjct:   361 SGLVDPSELLANIEMQINKIKDEAQSRKDIMDRIDRWLSACEEENWLEEYNLDENRYSAG 420

Query:   419 RGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTR 478
             RG H+NLKRAERARVT++KIP +VD LI +TL WEE+ +  FLYDGVRLV+IL+DYKLTR
Sbjct:   421 RGGHVNLKRAERARVTINKIPGMVDTLIKKTLVWEEDMQKSFLYDGVRLVNILEDYKLTR 480

Query:   479 VQREEEKKRYRDQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCR-ANGNGSMTPTPR 537
              Q+EEEKKRYRDQKK QDLLLT++E+IYGSKPSPR+S+SFRKPNG   +NGNGS+ PTPR
Sbjct:   481 KQQEEEKKRYRDQKKRQDLLLTQRESIYGSKPSPRRSSSFRKPNGFNISNGNGSVPPTPR 540

Query:   538 RYSIGSGTPE-LLTPRSYSS--RQNGHFREMRRLSTAPLNFVAISKEDTMSS-YTSVCGS 593
             R S+G+ TP+ LLTPRSYS   RQNG+F+E+RRLST PLN+VA+ KEDT+S+ YTS+  S
Sbjct:   541 RGSVGTTTPDVLLTPRSYSGHHRQNGYFKEVRRLSTTPLNYVAMQKEDTVSTTYTSIYSS 600

Query:   594 EPGSPPQG 601
             EP SP QG
Sbjct:   601 EPDSPLQG 608
GO:0005634 "nucleus" evidence=ISM
GO:0009536 "plastid" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA;IDA
GO:0008017 "microtubule binding" evidence=IDA
GO:0031116 "positive regulation of microtubule polymerization" evidence=IDA
GO:0009524 "phragmoplast" evidence=IDA
GO:0009574 "preprophase band" evidence=IDA
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
TAIR|locus:2006737 MAP65-7 "AT1G14690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116267 MAP65-2 "AT4G26760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153152 PLE "AT5G51600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167978 MAP65-9 "microtubule-associated protein 65-9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGV8 PRC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1858961 Prc1 "protein regulator of cytokinesis 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F8W9B5 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1311754 Prc1 "protein regulator of cytokinesis 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|H9KV59 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIS3MA656_ARATHNo assigned EC number0.72361.00.9884yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query601
pfam03999619 pfam03999, MAP65_ASE1, Microtubule associated prot 9e-51
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.002
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.003
>gnl|CDD|217835 pfam03999, MAP65_ASE1, Microtubule associated protein (MAP65/ASE1 family) Back     alignment and domain information 
 Score =  185 bits (470), Expect = 9e-51
 Identities = 129/564 (22%), Positives = 227/564 (40%), Gaps = 63/564 (11%)

Query: 37  EKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELNIHSPIQT 96
            ++  L +++       +   EE++  K  + + +A   AE+  L A  G     S    
Sbjct: 1   LQNLNLADIKIHYSSFEKDLKEESSTKKQAILKDIAVLRAEIKRLSAENGIEQDISNSLL 60

Query: 97  EKRSTSLKEKLA------SIAPLV---------EDLRTKKEERMKQFADIKAQIEKIS-- 139
            K    L  +        S    V         E LR +K ER  +  ++  Q+ ++   
Sbjct: 61  HKEPLQLLSEKDILQRPKSFPLGVWLLKLRDQLESLRKQKAERRAEIKELLHQLLQLCNE 120

Query: 140 -GEISGYDHLSNSLINSLSLEEEDLSLRRITECQTHLRTLQKEKSDRLNRVLEYVNEVHS 198
            GE        ++   SL   EE    R        L  L++EK  RL  V      + S
Sbjct: 121 LGEPPLSLLRKDADPLSLPNLEELEHFR------ERLGELREEKVRRLEEVDSLKQSIKS 174

Query: 199 ICGVLGLDFGQTV--SDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERKIRIQKLK 256
           +C +LG    +T    DV   L    + +   ++  T++ L+  +  L A++K R  K+ 
Sbjct: 175 LCSLLGTPPARTDFEQDV---LSYGEIPNDHCVTRETIDKLDKMLENLAAQKKQRADKID 231

Query: 257 DIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTK 316
           D+   + ELWN +    +++  F             + E  +LS E I++   EVERL  
Sbjct: 232 DLREQIQELWNRLQISDEEQKRF-------------VREATILSQESIKRLEEEVERLEA 278

Query: 317 LKATRMKELVLKKRSELEEICKMTHIEPDTSTAAEKS--NAMIDSGLVDPSELLANIEAQ 374
           LK   +K+ +   R E++E+  +       S    KS      +        LL   E +
Sbjct: 279 LKKQNLKKFIEDLRIEIQELWDLLFY----SEEQRKSFTPYYEELYTEQ---LLEQHENE 331

Query: 375 IVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVT 434
           I ++K+E  S K+I++ I++W    E  + LE    D NR+N  RG H+ LK  +  +  
Sbjct: 332 IKRLKEEYSSNKEILELIEKWESLWERMEELEAKANDPNRFN-NRGGHL-LKEEKERKRL 389

Query: 435 VSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKM 494
             K+P + + L  +  AWE E    FL  GV L+  +   +    +  +EK+R + +KK+
Sbjct: 390 TRKLPKVEEQLTAKVTAWEGEFGTPFLVHGVPLLERMAQIEAQWERHRQEKQRAKARKKL 449

Query: 495 QDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRANGNGSMTPTPRRYSIGSGTP------EL 548
            +   T  E  YGS  S         P+  R + N +      + +             L
Sbjct: 450 ANKTSTVMEPPYGSTESSVP----STPSTRRNDRNITSNTPSLKRTPNLTKSSLSQEASL 505

Query: 549 LTPRSYSSRQNGHFREMRRLSTAP 572
           ++  + ++ ++   R +  L   P
Sbjct: 506 ISKSTGNTHKHSTPRRLTTLPKLP 529

Length = 619
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 601
KOG4302660 consensus Microtubule-associated protein essential 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 99.91
KOG4302 660 consensus Microtubule-associated protein essential 99.9
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 93.78
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 93.57
PF15070617 GOLGA2L5: Putative golgin subfamily A member 2-lik 92.99
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 92.74
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 92.38
KOG09331174 consensus Structural maintenance of chromosome pro 91.43
PHA02562562 46 endonuclease subunit; Provisional 90.35
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 89.33
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 89.23
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 89.02
KOG09961293 consensus Structural maintenance of chromosome pro 87.49
PHA02562562 46 endonuclease subunit; Provisional 85.69
TIGR021681179 SMC_prok_B chromosome segregation protein SMC, com 85.39
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 85.18
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 85.14
PRK02224 880 chromosome segregation protein; Provisional 83.45
TIGR00634563 recN DNA repair protein RecN. All proteins in this 82.43
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 82.36
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 80.4
PF10239318 DUF2465: Protein of unknown function (DUF2465); In 80.39
KOG09641200 consensus Structural maintenance of chromosome pro 80.26
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-111  Score=928.84  Aligned_cols=574  Identities=48%  Similarity=0.717  Sum_probs=523.7

Q ss_pred             cccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 036719           10 SVRTSTSCNALLRELQQIWSDIGESEAEKDRILMELERECLEVYRRKVEEAANAKARLHQTVAAKEAELATLMAALGELN   89 (601)
Q Consensus        10 ~~~~~~~c~~~l~eL~~IWdEIG~~e~eR~~~l~~le~e~l~v~~~~V~e~~~~k~~L~q~I~~~~~El~~L~~eLg~~~   89 (601)
                      +....+||++++.+|+.|||+||+++++|++++..|++||+++|+++|+++...+++|+++|+.++++++.||++||+++
T Consensus         9 ~~~~~~t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~~kve~a~~~~~~L~~~ia~~eael~~l~s~l~~~~   88 (660)
T KOG4302|consen    9 SLQIEATCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYKRKVEEASESKARLLQEIAVIEAELNDLCSALGEPS   88 (660)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            56779999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccCccCCCCcHHHHH
Q 036719           90 IHSPIQTEKRSTSLKEKLASIAPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYDHLSNSLINSLSLEEEDLSLRRIT  169 (601)
Q Consensus        90 ~~~~~~~~~~~~tL~eql~~l~~~le~Lrk~K~eR~~ef~~l~~qi~~L~~eL~~~~~~~~e~l~~~~~~e~dlS~~~L~  169 (601)
                      +.. ..+++..+||++++..+.+.++.|+++|++|+++|.+++.||+.||.+|||. +...   .....|+.|||+++|+
T Consensus        89 ~~~-~~~~k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~~qie~l~~~l~g~-~~~~---~~~~~D~~dlsl~kLe  163 (660)
T KOG4302|consen   89 IIG-EISDKIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELYHQIEKLCEELGGP-EDLP---SFLIADESDLSLEKLE  163 (660)
T ss_pred             ccc-ccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccCC---cccccCcccccHHHHH
Confidence            762 1256788899999999999999999999999999999999999999999998 2211   1345578899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 036719          170 ECQTHLRTLQKEKSDRLNRVLEYVNEVHSICGVLGLDFGQTVSDVHPSLHGTAMGHSTNISNSTLEGLEHAIVKLKAERK  249 (601)
Q Consensus       170 ~l~~~L~~Lq~EK~~R~~kv~~l~~~I~~L~~~Lg~d~~~~v~ev~~sl~~~~~~~~~~lS~~~L~~L~~~~~~L~e~K~  249 (601)
                      +|+.+|.+|++||..|+++|.+++.+|+.||.+||++|..+|+++||+|.+..++++++||++||++|..++..|+++|.
T Consensus       164 elr~~L~~L~~ek~~Rlekv~~~~~~I~~l~~~Lg~~~~~~vt~~~~sL~~~~~~~~~~is~etl~~L~~~v~~l~~~k~  243 (660)
T KOG4302|consen  164 ELREHLNELQKEKSDRLEKVLELKEEIKSLCSVLGLDFSMTVTDVEPSLVDHDGEQSRSISDETLDRLDKMVKKLKEEKK  243 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhhhhhccCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHhhhcccCccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036719          250 IRIQKLKDIVVSLFELWNLMDSPIQDKNSFSKITSILRLSESEITEPGVLSTEVIEQASTEVERLTKLKATRMKELVLKK  329 (601)
Q Consensus       250 ~R~~kl~~L~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~~~~~~~~LS~~~I~~le~Ev~RLe~lK~~~mk~lI~k~  329 (601)
                      +|.+++++|+.+|.+|||+|++|++||..|.+++      ++|++.+++||.++|.+++.||.||++||+++||+||+++
T Consensus       244 qr~~kl~~l~~~~~~LWn~l~ts~Ee~~~f~~~t------~~e~t~~~~ls~d~I~~ve~Ev~Rl~qlK~s~mKeli~k~  317 (660)
T KOG4302|consen  244 QRLQKLQDLRTKLLELWNLLDTSDEERQRFVHVT------ESEATEPNSLSLDIIEQVEKEVDRLEQLKASNMKELIEKK  317 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCHHHHHHHcccc------HHHhhccccccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999999999985      8899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCccchHHHhhhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHHHHHHc
Q 036719          330 RSELEEICKMTHIEPDTSTAAEKSNAMIDSGLVDPSELLANIEAQIVKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYN  409 (601)
Q Consensus       330 r~eLeelWd~~~~~~e~~~~~~~~~~~~~s~~~~~eelL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~~e~~~LE~~~  409 (601)
                      |.||++||+.+||+++....+.++..++++|.++..++|+.++.+|.++|+++.+||+|+++|++|.++|+++.||++|+
T Consensus       318 r~Eleel~~~~h~s~~~e~~~~f~~~~~ds~~~d~~ell~~~d~~i~k~keea~srk~il~~ve~W~sa~EeE~~lee~n  397 (660)
T KOG4302|consen  318 RSELEELWRLLHYSEENESRRRFITYLIDSGTEDVLELLENIDNLIKKYKEEALSRKEILERVEKWESACEEESWLEEYN  397 (660)
T ss_pred             HHHHHHHHHHHhccccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccc
Confidence            99999999999999964445556777789999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCCccccchHHHHHHHhhhhhHHHHHHHHHHHHHHHHHcCCceEECCccHHHHHHHHHHHHHhhHHHHHHHH
Q 036719          410 QDDNRYNAGRGAHINLKRAERARVTVSKIPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYR  489 (601)
Q Consensus       410 ~D~~R~~~~RG~h~~LlreEK~Rk~i~KlPkl~~~L~~~l~~wE~e~g~~Fl~dG~~ll~~lee~~~~r~eKE~ek~r~R  489 (601)
                      +|.|||+++||||++|+||||+|++|+|||+|++.|+.++.+||.++|+||+|||++|++|+++|..||++||++|+|+|
T Consensus       398 ~D~nR~~~~Rg~h~lLkreekar~~vsKlP~~~~~L~~k~~~wE~e~~~~FL~~g~~ll~m~~e~~~~r~~ke~~k~r~r  477 (660)
T KOG4302|consen  398 RDSNRYNAGRGAHLLLKREEKARKLVSKLPKMVEALTAKVTAWEEEKGRPFLVDGVPLLEMLEEYEEHRQEKEQEKARQR  477 (660)
T ss_pred             chhhhHhccccchhHHHHHHHHHHHhhhCchhhHHHHHHHHHHHHhcCCceeecCccHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999998899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhHHHhhhhhhccCCCCCCCCCCCccCCCCCCCC--CCCCCCCCCCCccCCCCCCCCCCCCCcccccCcccccccc
Q 036719          490 DQKKMQDLLLTEKEAIYGSKPSPRKSNSFRKPNGCRAN--GNGSMTPTPRRYSIGSGTPELLTPRSYSSRQNGHFREMRR  567 (601)
Q Consensus       490 ~~kk~~~~~~~e~e~~~Gs~ps~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  567 (601)
                      ++||.++|+.++++..|||+|||.+|+|.||..|+++|  ++.+++|+.|++|.|.......+... ..  +  -+..+.
T Consensus       478 d~kk~s~q~~~~~~~~~~sk~sp~~p~s~rk~~~~~t~~~~~~~~~ps~~~~s~~~~~~s~~~~~~-~~--s--~r~~~~  552 (660)
T KOG4302|consen  478 DQKKTSGQLKPEQEGRYGSKPSPSKPNSPRKNRGRSTPPNGSLSKTPSKRPLSGGNSAASTQNRTT-PL--S--PRRLRA  552 (660)
T ss_pred             cccccccccCccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCccCcCCCCCCCCCcccCCC-CC--C--cccccC
Confidence            99999999999999999999999999999999998885  44788999888887665432111101 10  1  133344


Q ss_pred             ccCCCCcccccccCccccc--cccccCCCCCCCC
Q 036719          568 LSTAPLNFVAISKEDTMSS--YTSVCGSEPGSPP  599 (601)
Q Consensus       568 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  599 (601)
                      .++.|.||++..+.++.++  ++.++++.|.+|+
T Consensus       553 ~st~p~n~~~~~~~~~l~s~~~~~~~~~~~~~~~  586 (660)
T KOG4302|consen  553 SSTTPANKVARQKIESLNSNNSSPASSSLSTSQT  586 (660)
T ss_pred             CCCCCchhhhcccccccccCCCCCccCCCCCCCC
Confidence            5578999999999988864  3335666666553

>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>TIGR00634 recN DNA repair protein RecN Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>PF10239 DUF2465: Protein of unknown function (DUF2465); InterPro: IPR018797 FAM98A, B and C are glycine-rich proteins found from worms to humans whose function is unknown Back     alignment and domain information
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query601
3nrx_A130 Insights Into Anti-Parallel Microtubule Crosslinkin 9e-04
>pdb|3NRX|A Chain A, Insights Into Anti-Parallel Microtubule Crosslinking By Prc1, A Conserved Non-Motor Microtubule Binding Protein Length = 130 Back     alignment and structure 
Iteration: 1

 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 386 KDIMDRIDRWLYACEEEKW-----LEEYNQDDNRYNAGRGAHINLKRAERARVTVSK-IP 439
           K++ + + +W     EE W      E    D NR+   RG   NL + E+ R  + K +P
Sbjct: 13  KELFEGVQKW-----EETWRLFLEFERKASDPNRF-TNRGG--NLLKEEKQRAKLQKMLP 64
Query: 440 AIVDNLINRTLAWEEEKKIFFLYDGVRLVS-ILDDYKLTRVQREEEKKRYRDQKKMQDLL 498
            + + L  R   WE+E    F+ +G + +  + + +++ R+    EK+R + ++++++  
Sbjct: 65  KLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQWEMHRL----EKERAKQERQLKNKK 120
Query: 499 LTEKEAIYGS 508
            TE E +YGS
Sbjct: 121 QTETEMLYGS 130

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query601
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 1e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-09
2xs1_A704 Programmed cell death 6-interacting protein; prote 2e-04
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Length = 130 Back     alignment and structure
 Score =  112 bits (282), Expect = 1e-29
 Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 7/133 (5%)

Query: 377 KVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVS 436
            +K+     K++ + + +W          E    D NR+    G   NL + E+ R  + 
Sbjct: 4   ALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGG---NLLKEEKQRAKLQ 60

Query: 437 K-IPAIVDNLINRTLAWEEEKKIFFLYDGVRLVSILDDYKLTRVQREEEKKRYRDQKKMQ 495
           K +P + + L  R   WE+E    F+ +G + +  + +          EK+R + +++++
Sbjct: 61  KMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQ---WEMHRLEKERAKQERQLK 117

Query: 496 DLLLTEKEAIYGS 508
           +   TE E +YGS
Sbjct: 118 NKKQTETEMLYGS 130
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query601
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 100.0
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 80.94
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Back     alignment and structure
Probab=100.00  E-value=1.5e-38  Score=286.99  Aligned_cols=126  Identities=26%  Similarity=0.514  Sum_probs=116.7

Q ss_pred             HHHHHHHhhhhHHHHHHHHHHHHhHHHHHHHHHcCCccccccCCCccccchHHHHHHHhhhh-hHHHHHHHHHHHHHHHH
Q 036719          376 VKVKDEALSRKDIMDRIDRWLYACEEEKWLEEYNQDDNRYNAGRGAHINLKRAERARVTVSK-IPAIVDNLINRTLAWEE  454 (601)
Q Consensus       376 ~~lke~~~~~k~Il~~vekw~~l~~e~~~LE~~~~D~~R~~~~RG~h~~LlreEK~Rk~i~K-lPkl~~~L~~~l~~wE~  454 (601)
                      ++|+++|.+|++||++|++|..+|.+...||+|++|||||+ ||||  +|++|||+|++|+| ||+|++.|+++|.+||.
T Consensus         3 ~rLk~~y~~~k~Ile~vekweelw~~~~eLE~~~~D~sR~~-~Rgg--~LlreEK~Rk~i~k~lP~l~~~L~~~i~~wE~   79 (130)
T 3nrx_A            3 AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFT-NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQ   79 (130)
T ss_dssp             CHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHcCChhhhh-ccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999 8999  99999999999998 99999999999999999


Q ss_pred             HcCCceEECCccHHHHH-HHHHHHHHhhHHHHHHHHHHHhhhHHHhhhhhhccCC
Q 036719          455 EKKIFFLYDGVRLVSIL-DDYKLTRVQREEEKKRYRDQKKMQDLLLTEKEAIYGS  508 (601)
Q Consensus       455 e~g~~Fl~dG~~ll~~l-ee~~~~r~eKE~ek~r~R~~kk~~~~~~~e~e~~~Gs  508 (601)
                      ++|.||+|||++|+++| ++|+.+|++||+||+| |++||.   +++|+||+|||
T Consensus        80 e~g~~Flv~G~~~le~l~eqw~~~r~~KE~eK~~-R~~kk~---~~~e~e~~~gs  130 (130)
T 3nrx_A           80 EHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQE-RQLKNK---KQTETEMLYGS  130 (130)
T ss_dssp             HHTSCCEETTEEHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHHCC
T ss_pred             HcCCeeeEcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHhccCC
Confidence            99999999999999999 5699999999999999 999998   48999999998
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00