Citrus Sinensis ID: 036748

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
FCAVIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY
Secondary Structure (PSIPRED)
ccEEEccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccHHHHHHHHHccccccccHHHHHHccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHcHEEEccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
fcavihgpngptphsefehssipATVKKLFNLKsnfltkrdaWAGTFEKFLQLrktprddcpvtlpevtrslrpwgpredKELSEFQVELIQLAAQLVGDYVlntypnmgknmtageaNRYAEDAVKRFLEAGKAAIRAGANESAIVtmrpsltsrtaggdygsyakay
Flexible Loop (DISEMBL)
fcavihgpngptphsefehSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFlqlrktprddcpvtlpevtrslrpwgprEDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIraganesaivtmrpsltsrtaggdygsyakay
Low Complexity Region (SEG)
FCAVIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY
Disordered region (IsUnstruct)
***********************ATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPW*******LSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRA******************************
Disordered Region (DISOPRED)
*CAVI***N******EFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCP***********************FQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGK******************************YA*AY
Disordered Region (DISEMBL)
FCAVIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY
Disordered Region (DISPRO)
FCAVIHGPNGPTPHS*FEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRAGAN*S*I*T***************SY****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FCAVIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAEDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
255569329	537	hydrolase, acting on ester bonds, putati	0.982	0.309	0.819	3e-74
225434610	532	PREDICTED: phospholipase C 3-like [Vitis	0.970	0.308	0.810	1e-72
147833023	1819	hypothetical protein VITISV_028790 [Viti	0.958	0.089	0.820	2e-72
297745907	226	unnamed protein product [Vitis vinifera]	0.970	0.725	0.810	2e-72
449496583	534	PREDICTED: phospholipase C 3-like [Cucum	0.970	0.307	0.756	5e-68
449450802	534	PREDICTED: phospholipase C 3-like [Cucum	0.958	0.303	0.765	7e-68
224059300	535	predicted protein [Populus trichocarpa]	0.982	0.310	0.771	1e-66
8954023	533	Contains similarity to an unknown protei	0.917	0.290	0.748	6e-66
186478224	533	phospholipase C [Arabidopsis thaliana] g	0.917	0.290	0.748	6e-66
125546275	545	hypothetical protein OsI_14148 [Oryza sa	0.917	0.284	0.767	7e-66

>gi|255569329|ref|XP_002525632.1| hydrolase, acting on ester bonds, putative [Ricinus communis] gi|223535068|gb|EEF36750.1| hydrolase, acting on ester bonds, putative [Ricinus communis]

 Score =  282 bits (721), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 136/166 (81%), Positives = 146/166 (87%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPTPHS+FEHSSIPATVKKLFNLKSNFLTKRDAWAGTFE +  +R TPRDDCP 
Sbjct: 372 VIHEPVGPTPHSQFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEDYFHIRDTPRDDCPE 431

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLPEV  SLRP GP ED  LSEFQVELIQLA+QL GD+VLNTYP++GK+MT GEANRYAE
Sbjct: 432 TLPEVQMSLRPRGPIEDMRLSEFQVELIQLASQLNGDHVLNTYPDIGKSMTVGEANRYAE 491

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY 169
           DAVKRFLEAGKAA+RAGANESAIVTMRPSLTSR   GD+ SY KAY
Sbjct: 492 DAVKRFLEAGKAALRAGANESAIVTMRPSLTSRVPVGDHDSYLKAY 537

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434610|ref|XP_002278413.1| PREDICTED: phospholipase C 3-like [Vitis vinifera]

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 143/164 (87%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPTPHS+FEHSSIPATVKKLFNLKSNFLTKRDAWAGTFE +   R TPRDDCP 
Sbjct: 367 VIHEPTGPTPHSQFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFENYFYFRDTPRDDCPE 426

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLPEVT  LRP GP+ED  LSEFQVELIQLA+QL GDYVLNTYP +GK+MT GEANRYAE
Sbjct: 427 TLPEVTTPLRPRGPKEDLSLSEFQVELIQLASQLNGDYVLNTYPYIGKSMTVGEANRYAE 486

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAK 167
           DAV+RFLEAGKAA+RAGAN+SAIVTMRPSLTSRT G DY  Y +
Sbjct: 487 DAVRRFLEAGKAALRAGANDSAIVTMRPSLTSRTMGPDYKKYVE 530

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833023|emb|CAN61893.1| hypothetical protein VITISV_028790 [Vitis vinifera]

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/162 (82%), Positives = 142/162 (87%)

Query: 4    VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
            VIH P GPTPHS+FEHSSIPATVKKLFNLKSNFLTKRDAWAGTFE +   R TPRDDCP 
Sbjct: 1222 VIHEPTGPTPHSQFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFENYFYFRDTPRDDCPE 1281

Query: 64   TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
            TLPEVT  LRP GP+ED  LSEFQVELIQLA+QL GDYVLNTYP +GK+MT GEANRYAE
Sbjct: 1282 TLPEVTTPLRPRGPKEDLSLSEFQVELIQLASQLNGDYVLNTYPYIGKSMTVGEANRYAE 1341

Query: 124  DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSY 165
            DAV+RFLEAGKAA+RAGAN+SAIVTMRPSLTSRT G DY  Y
Sbjct: 1342 DAVRRFLEAGKAALRAGANDSAIVTMRPSLTSRTMGPDYKKY 1383

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745907|emb|CBI15963.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 143/164 (87%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPTPHS+FEHSSIPATVKKLFNLKSNFLTKRDAWAGTFE +   R TPRDDCP 
Sbjct: 61  VIHEPTGPTPHSQFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFENYFYFRDTPRDDCPE 120

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLPEVT  LRP GP+ED  LSEFQVELIQLA+QL GDYVLNTYP +GK+MT GEANRYAE
Sbjct: 121 TLPEVTTPLRPRGPKEDLSLSEFQVELIQLASQLNGDYVLNTYPYIGKSMTVGEANRYAE 180

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAK 167
           DAV+RFLEAGKAA+RAGAN+SAIVTMRPSLTSRT G DY  Y +
Sbjct: 181 DAVRRFLEAGKAALRAGANDSAIVTMRPSLTSRTMGPDYKKYVE 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496583|ref|XP_004160171.1| PREDICTED: phospholipase C 3-like [Cucumis sativus]

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 124/164 (75%), Positives = 141/164 (85%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPT  S+FEHSS+PATVKKLFNLKSNFLTKRDAWAGTF+ +L+LR  PRDDCP 
Sbjct: 369 VIHEPVGPTSTSQFEHSSVPATVKKLFNLKSNFLTKRDAWAGTFDHYLKLRDHPRDDCPE 428

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLP+VT  LRPWGP+E  +LSEFQVELIQLA+QL GD+VLN+YPN+GK MT GEAN+YAE
Sbjct: 429 TLPKVTAPLRPWGPKEHAKLSEFQVELIQLASQLNGDHVLNSYPNIGKYMTVGEANKYAE 488

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAK 167
           DAVKRFLEAG+ A+ AGANESAIVTMRPSLTSRT   D G + +
Sbjct: 489 DAVKRFLEAGRVALMAGANESAIVTMRPSLTSRTTAVDSGPFVE 532

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450802|ref|XP_004143151.1| PREDICTED: phospholipase C 3-like [Cucumis sativus]

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/162 (76%), Positives = 140/162 (86%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPT  S+FEHSS+PATVKKLFNLKSNFLTKRDAWAGTF+ +L+LR  PRDDCP 
Sbjct: 369 VIHEPVGPTSTSQFEHSSVPATVKKLFNLKSNFLTKRDAWAGTFDHYLKLRDHPRDDCPE 428

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLP+VT  LRPWGP+E  +LSEFQVELIQLA+QL GD+VLN+YPN+GK MT GEAN+YAE
Sbjct: 429 TLPKVTAPLRPWGPKEHAKLSEFQVELIQLASQLNGDHVLNSYPNIGKYMTVGEANKYAE 488

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSY 165
           DAVKRFLEAG+ A+ AGANESAIVTMRPSLTSRT   D G +
Sbjct: 489 DAVKRFLEAGRVALMAGANESAIVTMRPSLTSRTTAVDSGPF 530

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059300|ref|XP_002299814.1| predicted protein [Populus trichocarpa] gi|222847072|gb|EEE84619.1| predicted protein [Populus trichocarpa]

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 128/166 (77%), Positives = 145/166 (87%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P+GP P S+FEHSSIPATVKKLFNL SNFLT+RDAWAG+FE +  LR TPRDDCP 
Sbjct: 370 VIHEPDGPRPDSQFEHSSIPATVKKLFNLNSNFLTRRDAWAGSFENYFYLRDTPRDDCPE 429

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
           TLP+VT SLRPWGP+ED  LSEFQVE+IQLA+QL GD+VLN YP++GK+MT GEANRYAE
Sbjct: 430 TLPDVTTSLRPWGPKEDASLSEFQVEMIQLASQLNGDHVLNAYPDIGKSMTVGEANRYAE 489

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGDYGSYAKAY 169
           DAV+RFLEAG+AA+RAGANESAIVTM+PSLTSR   GD G Y KAY
Sbjct: 490 DAVRRFLEAGRAALRAGANESAIVTMKPSLTSRVPAGDNGRYQKAY 535

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8954023|gb|AAF82197.1|AC067971_5 Contains similarity to an unknown protein T8P19.120 gi|6523092 from Arabidopsis thaliana BAC T8P19 gb|AL133315. ESTs gb|R84021, gb|AI992399, gb|H76814, gb|F15169, gb|AA585873, and gb|AA605516 come from this gene [Arabidopsis thaliana]

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 116/155 (74%), Positives = 138/155 (89%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPTPHS+FEHSSIPATVKKLFNLKS+FLTKRDAWAGTFEK+ ++R +PR DCP 
Sbjct: 367 VIHEPEGPTPHSQFEHSSIPATVKKLFNLKSHFLTKRDAWAGTFEKYFRIRDSPRQDCPE 426

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
            LPEV  SLRPWG +ED +LSEFQVELIQLA+QLVGD++LN+YP++GKNMT  E N+YAE
Sbjct: 427 KLPEVKLSLRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSEGNKYAE 486

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTA 158
           DAV++FLEAG AA+ AGA+E+ IVTMRPSLT+RT+
Sbjct: 487 DAVQKFLEAGMAALEAGADENTIVTMRPSLTTRTS 521

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478224|ref|NP_172203.2| phospholipase C [Arabidopsis thaliana] gi|21703147|gb|AAM74513.1| At1g07230/F10K1_4 [Arabidopsis thaliana] gi|24417127|dbj|BAC22506.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gi|58652062|gb|AAW80856.1| At1g07230 [Arabidopsis thaliana] gi|332189974|gb|AEE28095.1| phospholipase C [Arabidopsis thaliana]

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 116/155 (74%), Positives = 138/155 (89%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH P GPTPHS+FEHSSIPATVKKLFNLKS+FLTKRDAWAGTFEK+ ++R +PR DCP 
Sbjct: 367 VIHEPEGPTPHSQFEHSSIPATVKKLFNLKSHFLTKRDAWAGTFEKYFRIRDSPRQDCPE 426

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
            LPEV  SLRPWG +ED +LSEFQVELIQLA+QLVGD++LN+YP++GKNMT  E N+YAE
Sbjct: 427 KLPEVKLSLRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSEGNKYAE 486

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTA 158
           DAV++FLEAG AA+ AGA+E+ IVTMRPSLT+RT+
Sbjct: 487 DAVQKFLEAGMAALEAGADENTIVTMRPSLTTRTS 521

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125546275|gb|EAY92414.1| hypothetical protein OsI_14148 [Oryza sativa Indica Group]

 Score =  254 bits (650), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 119/155 (76%), Positives = 137/155 (88%)

Query: 4   VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
           VIH PNGP   S++EHSSIPATVKKLFNL SNFLTKRDAWAGTFE + ++RKTPR DCP 
Sbjct: 382 VIHEPNGPQDSSQYEHSSIPATVKKLFNLHSNFLTKRDAWAGTFENYFKIRKTPRTDCPE 441

Query: 64  TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
            LPEVT+SLRP+GP+ED  LSEFQVELIQLA+QL GD+VLNTYP++G+ MT GEANRYAE
Sbjct: 442 KLPEVTKSLRPFGPKEDSSLSEFQVELIQLASQLNGDHVLNTYPDIGRTMTVGEANRYAE 501

Query: 124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTA 158
           DAV RFLEAG+ A+RAGANESA+VTMRP+LTSR +
Sbjct: 502 DAVARFLEAGRIALRAGANESALVTMRPALTSRAS 536

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2007357	533	NPC1 "non-specific phospholipa	0.982	0.311	0.706	1e-61
TAIR|locus:2039563	514	NPC2 "non-specific phospholipa	0.899	0.295	0.612	2.2e-43
TAIR|locus:2114470	520	NPC6 "non-specific phospholipa	0.899	0.292	0.564	3.3e-40
TAIR|locus:2099654	523	NPC3 "non-specific phospholipa	0.881	0.284	0.5	1.3e-32
TAIR|locus:2099639	538	NPC4 "non-specific phospholipa	0.834	0.262	0.475	1e-27
TAIR|locus:2096384	521	NPC5 "non-specific phospholipa	0.834	0.270	0.468	1.9e-26

TAIR|locus:2007357 NPC1 "non-specific phospholipase C1" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 118/167 (70%), Positives = 142/167 (85%)

Query:     4 VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
             VIH P GPTPHS+FEHSSIPATVKKLFNLKS+FLTKRDAWAGTFEK+ ++R +PR DCP 
Sbjct:   367 VIHEPEGPTPHSQFEHSSIPATVKKLFNLKSHFLTKRDAWAGTFEKYFRIRDSPRQDCPE 426

Query:    64 TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPNMGKNMTAGEANRYAE 123
              LPEV  SLRPWG +ED +LSEFQVELIQLA+QLVGD++LN+YP++GKNMT  E N+YAE
Sbjct:   427 KLPEVKLSLRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSEGNKYAE 486

Query:   124 DAVKRFLEAGKAAIRAGANESAIVTMRPSLTSRTAGGD-YGSYAKAY 169
             DAV++FLEAG AA+ AGA+E+ IVTMRPSLT+RT+  +    Y  +Y
Sbjct:   487 DAVQKFLEAGMAALEAGADENTIVTMRPSLTTRTSPSEGTNKYIGSY 533

GO:0005886 "plasma membrane" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

TAIR|locus:2039563 NPC2 "non-specific phospholipase C2" [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 95/155 (61%), Positives = 111/155 (71%)

Query:     4 VIHGPNG-PTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCP 62
             V+HGPNG P P SE+EHSSIPATVKKLFNL S FLTKRD WAGTFE  LQ+RK PR DCP
Sbjct:   359 VVHGPNGSPFPSSEYEHSSIPATVKKLFNLSSPFLTKRDEWAGTFENILQIRKEPRTDCP 418

Query:    63 VTLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPN-MGKNMTAGEANRY 121
              TLPE  + +R     E   L+EFQ EL+QLAA L GD +L T+P  + K MT  E  RY
Sbjct:   419 ETLPEPVK-IRMGEANEKALLTEFQQELVQLAAVLKGDNMLTTFPKEISKGMTVIEGKRY 477

Query:   122 AEDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSR 156
              EDA+KRFLEAG+ A+  GAN+  +V M+ SLT R
Sbjct:   478 MEDAMKRFLEAGRMALSMGANKEELVHMKTSLTGR 512

GO:0005886 "plasma membrane" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

TAIR|locus:2114470 NPC6 "non-specific phospholipase C6" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 87/154 (56%), Positives = 110/154 (71%)

Query:     4 VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
             V+    GPT  SE+EHSSIPAT+KKLFNL SNFLT RDAWA TFE  +    TPR DCP+
Sbjct:   365 VVSEAKGPTESSEYEHSSIPATIKKLFNLSSNFLTHRDAWAATFEDVVSHLTTPRTDCPM 424

Query:    64 TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPN-MGKNMTAGEANRYA 122
             TLPEV   +R   P+ED  LSEFQ E++QLAA L GD+ L+++P  +GK MT  +A+ Y 
Sbjct:   425 TLPEVA-PMRATEPKEDAALSEFQGEVVQLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYV 483

Query:   123 EDAVKRFLEAGKAAIRAGANESAIVTMRPSLTSR 156
             + A  RF+ A K A++ GA++SAIV MR SLT+R
Sbjct:   484 KGATSRFIRASKEAMKLGADKSAIVDMRSSLTTR 517

GO:0005886 "plasma membrane" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

TAIR|locus:2099654 NPC3 "non-specific phospholipase C3" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.3e-32, P = 1.3e-32
 Identities = 77/154 (50%), Positives = 100/154 (64%)

Query:     4 VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
             V+H PNGP P S+FEHSSIPAT+KK+FNLKS FLTKRD WAGT +  +  R +PR DCPV
Sbjct:   352 VLHEPNGPEPTSQFEHSSIPATLKKIFNLKS-FLTKRDEWAGTLDAVIN-RTSPRTDCPV 409

Query:    64 TLPEVTRS--LRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYP-NMGKNMTAGEANR 120
             TLPE+ R+  +      ED++L++FQ+ELIQ AA L GD++ + YP  +   M   +A R
Sbjct:   410 TLPELPRARDIDIGTQEEDEDLTDFQIELIQAAAVLKGDHIKDIYPFKLADKMKVLDAAR 469

Query:   121 YAEDAVKRFLEAGKAAIRAGANESAIVTMRPSLT 154
             Y E+A  RF    K A   G +E  IV +    T
Sbjct:   470 YVEEAFTRFHGESKKAKEEGRDEHEIVDLSKGST 503

GO:0005886 "plasma membrane" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0004629 "phospholipase C activity" evidence=IDA

GO:0006796 "phosphate-containing compound metabolic process" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

GO:0052642 "lysophosphatidic acid phosphatase activity" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2099639 NPC4 "non-specific phospholipase C4" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 69/145 (47%), Positives = 95/145 (65%)

Query:     4 VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
             VIHGPNGP P S++EHSSIPATVK +F LK +FL+KRD+WAGTFE  +  R +PR DCP 
Sbjct:   352 VIHGPNGPYPRSQYEHSSIPATVKTIFKLK-DFLSKRDSWAGTFESVIT-RDSPRQDCPE 409

Query:    64 TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYPN-MGKNMTAGEANRYA 122
             TL    + LR    +E+ +LSEFQ +L+ +AA L GDY      + + K     +A++Y 
Sbjct:   410 TLSTPIK-LRGTMAKENAQLSEFQEDLVIMAAGLKGDYKNEELIHKLCKETCVADASKYV 468

Query:   123 EDAVKRFLEAGKAAIRAGANESAIV 147
              +A ++FLE  + A   G +E+ IV
Sbjct:   469 TNAFEKFLEESRKARDRGCDENDIV 493

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

GO:0004629 "phospholipase C activity" evidence=IDA

GO:0009395 "phospholipid catabolic process" evidence=IDA

TAIR|locus:2096384 NPC5 "non-specific phospholipase C5" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 68/145 (46%), Positives = 91/145 (62%)

Query:     4 VIHGPNGPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPV 63
             V+HG NGP   S++EHSSIPATVKK+F LK +FLTKRD+WAGTFE  +  R +PR DCP 
Sbjct:   351 VLHGSNGPYLMSQYEHSSIPATVKKIFKLK-DFLTKRDSWAGTFESVIT-RNSPRQDCPE 408

Query:    64 TLPEVTRSLRPWGPREDKELSEFQVELIQLAAQLVGDYVLNTYP-NMGKNMTAGEANRYA 122
             TL    + +R    +E+ ELS+FQ EL+ +AA L GDY        + K     +A++Y 
Sbjct:   409 TLSNPVK-MRGTVAKENAELSDFQEELVIVAAGLKGDYKNEELLYKLCKKTCVSDASKYV 467

Query:   123 EDAVKRFLEAGKAAIRAGANESAIV 147
               A  +F+E  K A   G +E+ IV
Sbjct:   468 TKAFDKFVEESKKARERGGDENDIV 492


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       169   0.00082  108 3  11 22  0.42    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  143 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.15u 0.11s 16.26t   Elapsed:  00:00:01
  Total cpu time:  16.15u 0.11s 16.26t   Elapsed:  00:00:01
  Start:  Fri May 10 04:52:12 2013   End:  Fri May 10 04:52:13 2013

GO:0005886 "plasma membrane" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

GO:0004629 "phospholipase C activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IMP

GO:0009395 "phospholipid catabolic process" evidence=IMP

GO:0016036 "cellular response to phosphate starvation" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
TIGR03396	690	PC_PLC phospholipase C, phosphocholine-specific, P	98.13
TIGR03397	483	acid_phos_Burk acid phosphatase, Burkholderia-type	93.5

>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type

Probab=98.13  E-value=2.4e-06  Score=82.49  Aligned_cols=58  Identities=21%  Similarity=0.324  Sum_probs=49.1

Q ss_pred             CCCCCCccccccHHHHHHHHhCCCCCCCch-hhhhccchHHhhhcCCCCCCCCCCCCccc
Q 036748           10 GPTPHSEFEHSSIPATVKKLFNLKSNFLTK-RDAWAGTFEKFLQLRKTPRDDCPVTLPEV   68 (169)
Q Consensus        10 Gp~~~s~YeHSSIlaTl~~Lf~L~~~~LT~-RdawA~tFe~llt~l~tPRtDcP~~Lp~p   68 (169)
                      |-..+..|||||||++|.++|||....+|+ |++++++|.++|. ...|.+..+..||.+
T Consensus       404 G~V~s~~~DHtSvLrflE~~fgl~~~nis~wRra~~gDLtsafd-f~~p~~~~~p~lp~~  462 (690)
T TIGR03396       404 GWVNSQVFDHTSVLRFLEKRFGVREPNISPWRRAVCGDLTSAFD-FSRPDTTPFPALPDT  462 (690)
T ss_pred             CcccCccccHHHHHHHHHHHhCCCCcccChhhhcccccHHHhcC-CCCCCcccCCCCCCc
Confidence            455778999999999999999999767898 9999999999999 777766654566655

Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.

>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type

Probab=93.50  E-value=0.052  Score=51.18  Aligned_cols=33  Identities=24%  Similarity=0.395  Sum_probs=25.7

Q ss_pred             CCCCCCccccccHHHHHHHHhCCCC-CCCchhhh
Q 036748           10 GPTPHSEFEHSSIPATVKKLFNLKS-NFLTKRDA   42 (169)
Q Consensus        10 Gp~~~s~YeHSSIlaTl~~Lf~L~~-~~LT~Rda   42 (169)
                      |-..+..|+|+||++||.++|||++ ..+|+|++
T Consensus       430 G~v~~~~~dh~SiL~Tie~~~GL~~L~~is~~~~  463 (483)
T TIGR03397       430 GYVDHTPYDTTSILRFITRRFGLPPLPGVKARDR  463 (483)
T ss_pred             CcEeCceeeeehHHHHHHHHhCCCCcCCCchhhh
Confidence            4456789999999999999999994 23466654

A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
2d1g_A	498	Acid phosphatase; ACPA, decavanadate vanadate, hyd	5e-06

>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp} Length = 498

 Score = 44.5 bits (104), Expect = 5e-06
 Identities = 7/69 (10%), Positives = 18/69 (26%), Gaps = 2/69 (2%)

Query: 10  GPTPHSEFEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKFLQLRKTPRDDCPVTLPEVT 69
               HS    +S+   ++  + + S      D ++          K  +      + +  
Sbjct: 427 NYVDHSLLNQASVLKFIEYNWGIGSVSKYSNDKYSNNILNMFDFNKEQKT--LKLILDPK 484

Query: 70  RSLRPWGPR 78
             L      
Sbjct: 485 TGLVMDKLN 493

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
2d1g_A	498	Acid phosphatase; ACPA, decavanadate vanadate, hyd	97.8

>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp}

Probab=97.80  E-value=1e-05  Score=73.96  Aligned_cols=48  Identities=13%  Similarity=0.268  Sum_probs=40.8

Q ss_pred             CCCCCCccccccHHHHHHHHhCCCCCCCch--hhhhccchHHhhhcCCCCCC
Q 036748           10 GPTPHSEFEHSSIPATVKKLFNLKSNFLTK--RDAWAGTFEKFLQLRKTPRD   59 (169)
Q Consensus        10 Gp~~~s~YeHSSIlaTl~~Lf~L~~~~LT~--RdawA~tFe~llt~l~tPRt   59 (169)
                      |-..+..|+|+|||+||.++|||+  .|++  ||++|+++..+++-...||+
T Consensus       427 G~V~~~~~dH~Silrtie~~~gl~--~l~~~~~da~a~~l~~~F~F~~~p~~  476 (498)
T 2d1g_A          427 NYVDHSLLNQASVLKFIEYNWGIG--SVSKYSNDKYSNNILNMFDFNKEQKT  476 (498)
T ss_dssp             TEEECCCEETHHHHHHHHHHHTCC--CSCTTCGGGGCCCSGGGBCSSCSSCC
T ss_pred             CceeCCccchhHHHHHHHHHhCCC--CCCcccccccccCHHHHhCCCCCCCC
Confidence            445677899999999999999999  7887  99999999999994344774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00