Citrus Sinensis ID: 036760
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 315 | ||||||
| 225446010 | 314 | PREDICTED: putative glucose-6-phosphate | 0.996 | 1.0 | 0.888 | 1e-165 | |
| 356530308 | 321 | PREDICTED: putative glucose-6-phosphate | 0.974 | 0.956 | 0.872 | 1e-161 | |
| 356556210 | 330 | PREDICTED: putative glucose-6-phosphate | 0.974 | 0.930 | 0.866 | 1e-161 | |
| 224126135 | 315 | predicted protein [Populus trichocarpa] | 0.974 | 0.974 | 0.880 | 1e-160 | |
| 224142231 | 315 | predicted protein [Populus trichocarpa] | 0.974 | 0.974 | 0.877 | 1e-159 | |
| 357449387 | 318 | hypothetical protein MTR_2g036810 [Medic | 0.968 | 0.959 | 0.865 | 1e-158 | |
| 224053080 | 309 | predicted protein [Populus trichocarpa] | 0.958 | 0.977 | 0.834 | 1e-152 | |
| 449461187 | 323 | PREDICTED: putative glucose-6-phosphate | 0.965 | 0.941 | 0.822 | 1e-152 | |
| 224075930 | 319 | predicted protein [Populus trichocarpa] | 0.971 | 0.959 | 0.816 | 1e-151 | |
| 358248468 | 326 | uncharacterized protein LOC100787970 [Gl | 0.971 | 0.938 | 0.830 | 1e-151 |
| >gi|225446010|ref|XP_002268176.1| PREDICTED: putative glucose-6-phosphate 1-epimerase [Vitis vinifera] gi|297735418|emb|CBI17858.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/315 (88%), Positives = 296/315 (93%), Gaps = 1/315 (0%)
Query: 1 MSTEKFLPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATF 60
MS+E+ +PVE CKG NGL+KVVLRE RGSSAEVYLYGG VTSWKNDHGEELLFVSSKA F
Sbjct: 1 MSSER-VPVELCKGINGLEKVVLREVRGSSAEVYLYGGQVTSWKNDHGEELLFVSSKAIF 59
Query: 61 KPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPS 120
KPPKAIRGGIPICFPQF + GSLE HGFARNR WSID DPP FPTN+SS+A+IDLIL+PS
Sbjct: 60 KPPKAIRGGIPICFPQFGNHGSLEQHGFARNRVWSIDVDPPPFPTNTSSRAFIDLILKPS 119
Query: 121 EEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVR 180
EED+KIWPHS+EFRLRVAL PGGDLML SR+RNTST+GKP +FTFAYHTYFSVSDISEVR
Sbjct: 120 EEDMKIWPHSYEFRLRVALGPGGDLMLTSRIRNTSTEGKPLTFTFAYHTYFSVSDISEVR 179
Query: 181 VEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDG 240
VEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIY+STPTKIAILDHEKKRTFVIRKDG
Sbjct: 180 VEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYVSTPTKIAILDHEKKRTFVIRKDG 239
Query: 241 LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSS 300
LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEW+GR ELS VPSS
Sbjct: 240 LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWRGRQELSAVPSS 299
Query: 301 YCSGQLDPQKVLSSS 315
YCSGQLDPQKVL S
Sbjct: 300 YCSGQLDPQKVLQCS 314
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530308|ref|XP_003533724.1| PREDICTED: putative glucose-6-phosphate 1-epimerase-like isoform 1 [Glycine max] gi|356530310|ref|XP_003533725.1| PREDICTED: putative glucose-6-phosphate 1-epimerase-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356556210|ref|XP_003546419.1| PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224126135|ref|XP_002329669.1| predicted protein [Populus trichocarpa] gi|222870550|gb|EEF07681.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224142231|ref|XP_002324462.1| predicted protein [Populus trichocarpa] gi|222865896|gb|EEF03027.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357449387|ref|XP_003594970.1| hypothetical protein MTR_2g036810 [Medicago truncatula] gi|355484018|gb|AES65221.1| hypothetical protein MTR_2g036810 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224053080|ref|XP_002297697.1| predicted protein [Populus trichocarpa] gi|222844955|gb|EEE82502.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449461187|ref|XP_004148323.1| PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224075930|ref|XP_002304833.1| predicted protein [Populus trichocarpa] gi|222842265|gb|EEE79812.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|358248468|ref|NP_001239631.1| uncharacterized protein LOC100787970 [Glycine max] gi|255635586|gb|ACU18143.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 315 | ||||||
| TAIR|locus:2165580 | 312 | AT5G57330 [Arabidopsis thalian | 0.987 | 0.996 | 0.785 | 3.2e-136 | |
| TAIR|locus:2082842 | 317 | AT3G61610 [Arabidopsis thalian | 0.946 | 0.940 | 0.657 | 2.1e-109 | |
| TAIR|locus:2084233 | 306 | AT3G01590 [Arabidopsis thalian | 0.955 | 0.983 | 0.641 | 1.5e-106 | |
| TAIR|locus:2128519 | 306 | AT4G23730 [Arabidopsis thalian | 0.936 | 0.964 | 0.632 | 2.5e-106 | |
| TAIR|locus:2145748 | 306 | AT5G14500 [Arabidopsis thalian | 0.955 | 0.983 | 0.635 | 2.5e-106 | |
| TAIR|locus:2117572 | 318 | AT4G25900 [Arabidopsis thalian | 0.901 | 0.893 | 0.601 | 1.4e-94 | |
| ASPGD|ASPL0000045178 | 315 | AN10222 [Emericella nidulans ( | 0.825 | 0.825 | 0.397 | 4.5e-43 | |
| UNIPROTKB|Q9KQJ7 | 296 | VC_2001 "Putative uncharacteri | 0.780 | 0.831 | 0.358 | 4.2e-40 | |
| TIGR_CMR|VC_2001 | 296 | VC_2001 "conserved hypothetica | 0.780 | 0.831 | 0.358 | 4.2e-40 | |
| FB|FBgn0028540 | 297 | CG9008 [Drosophila melanogaste | 0.822 | 0.872 | 0.347 | 4.3e-38 |
| TAIR|locus:2165580 AT5G57330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 245/312 (78%), Positives = 281/312 (90%)
Query: 1 MSTEKFLPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATF 60
M+TE+ E KG NGLDK+VLRESRG SAEVYLYG HVTSWKN++GEELL +SSKA F
Sbjct: 1 MATERH-HFELAKGINGLDKIVLRESRGRSAEVYLYGSHVTSWKNENGEELLHLSSKAIF 59
Query: 61 KPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPS 120
KPPK IRGGIP+CFPQF++ G+LESHGFARNR W ++ +PP P NS S A++DLILRP+
Sbjct: 60 KPPKPIRGGIPLCFPQFSNFGTLESHGFARNRIWEVEANPPPLPLNSCSSAFVDLILRPT 119
Query: 121 EEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVR 180
E+DLKIWP++FEFRLR+AL G+L L SR+RNT++DGKPF+FTFAYHTYFSVSDISEVR
Sbjct: 120 EDDLKIWPNNFEFRLRIALGTEGELTLTSRIRNTNSDGKPFTFTFAYHTYFSVSDISEVR 179
Query: 181 VEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDG 240
VEGLETLDYLDNL+++ERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDG
Sbjct: 180 VEGLETLDYLDNLKDRERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDG 239
Query: 241 LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSS 300
L DAVVWNPWDKK+K ++D GD++YKHMLCVEAAA+E+PITLKPGEEWKGRLELS VPSS
Sbjct: 240 LADAVVWNPWDKKSKTISDLGDEDYKHMLCVEAAAIERPITLKPGEEWKGRLELSAVPSS 299
Query: 301 YCSGQLDPQKVL 312
Y SGQLDP+KVL
Sbjct: 300 YSSGQLDPKKVL 311
|
|
| TAIR|locus:2082842 AT3G61610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2084233 AT3G01590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2128519 AT4G23730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2145748 AT5G14500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117572 AT4G25900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000045178 AN10222 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9KQJ7 VC_2001 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
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| TIGR_CMR|VC_2001 VC_2001 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
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| FB|FBgn0028540 CG9008 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00031339001 | SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (314 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00034293001 | • | 0.899 | |||||||||
| GSVIVG00030550001 | • | 0.899 | |||||||||
| GSVIVG00022229001 | • | 0.899 | |||||||||
| GSVIVG00016656001 | • | 0.899 | |||||||||
| GSVIVG00015125001 | • | 0.899 | |||||||||
| GSVIVG00014624001 | • | 0.899 | |||||||||
| GSVIVG00014427001 | • | 0.899 | |||||||||
| GSVIVG00010644001 | • | 0.899 | |||||||||
| GSVIVG00010600001 | • | 0.899 | |||||||||
| GSVIVG00038435001 | • | 0.800 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 315 | |||
| cd09020 | 269 | cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate | 1e-128 | |
| pfam01263 | 301 | pfam01263, Aldose_epim, Aldose 1-epimerase | 4e-72 | |
| COG0676 | 287 | COG0676, COG0676, Uncharacterized enzymes related | 2e-69 | |
| cd09025 | 271 | cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, | 8e-28 | |
| cd01081 | 284 | cd01081, Aldose_epim, aldose 1-epimerase superfami | 1e-13 | |
| COG2017 | 308 | COG2017, GalM, Galactose mutarotase and related en | 1e-07 | |
| cd09024 | 288 | cd09024, Aldose_epim_lacX, Aldose 1-epimerase, sim | 1e-05 |
| >gnl|CDD|185697 cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-128
Identities = 129/278 (46%), Positives = 162/278 (58%), Gaps = 12/278 (4%)
Query: 21 VVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASL 80
++ + G+SAE+ L G V SWK G++LL++S +A F KAIRGGIP+C+P F
Sbjct: 1 AIVLDHPGASAEIALQGAQVLSWKPKGGQDLLWLSPQAPFDGGKAIRGGIPVCWPWFGPH 60
Query: 81 G---SLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRV 137
G L +HGFAR R W + + + L L ++E IWPH+FE RL V
Sbjct: 61 GPNADLPAHGFARTRLWELLEV-----SEDEDGVTVSLELDDTDETRAIWPHAFELRLTV 115
Query: 138 ALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKE 197
L L L V NT KPFSFT A HTYF VSDI +VRVEGLE YLD L ++
Sbjct: 116 TLGFDT-LELELTVTNTGD--KPFSFTAALHTYFRVSDIEQVRVEGLEGATYLDKLTDQR 172
Query: 198 RFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAM 257
QG A+TF+ EVD++YL+TP + I D R I K G P AVVWNPW +KA M
Sbjct: 173 E-KVQGGAVTFDGEVDRVYLNTPAPLTIDDPAWGRRIRIEKSGSPSAVVWNPWIEKAARM 231
Query: 258 ADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELS 295
ADF DD Y+ M+CVEAA V P+TL PGE +S
Sbjct: 232 ADFPDDGYRRMVCVEAANVADPVTLAPGESHTLSQTIS 269
|
D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P. Length = 269 |
| >gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase | Back alignment and domain information |
|---|
| >gnl|CDD|223748 COG0676, COG0676, Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|185702 cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438 | Back alignment and domain information |
|---|
| >gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|185701 cd09024, Aldose_epim_lacX, Aldose 1-epimerase, similar to Lactococcus lactis lacX | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 315 | |||
| KOG1594 | 305 | consensus Uncharacterized enzymes related to aldos | 100.0 | |
| cd09020 | 269 | D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- | 100.0 | |
| COG0676 | 287 | Uncharacterized enzymes related to aldose 1-epimer | 100.0 | |
| cd09025 | 271 | Aldose_epim_Slr1438 Aldose 1-epimerase, similar to | 100.0 | |
| cd09024 | 288 | Aldose_epim_lacX Aldose 1-epimerase, similar to La | 100.0 | |
| cd09021 | 273 | Aldose_epim_Ec_YphB aldose 1-epimerase, similar to | 100.0 | |
| PRK15172 | 300 | putative aldose-1-epimerase; Provisional | 100.0 | |
| cd01081 | 284 | Aldose_epim aldose 1-epimerase superfamily. Aldose | 100.0 | |
| cd09022 | 284 | Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to | 100.0 | |
| PF01263 | 300 | Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 | 100.0 | |
| cd09019 | 326 | galactose_mutarotase_like galactose mutarotase_lik | 100.0 | |
| COG2017 | 308 | GalM Galactose mutarotase and related enzymes [Car | 100.0 | |
| PLN00194 | 337 | aldose 1-epimerase; Provisional | 100.0 | |
| TIGR02636 | 335 | galM_Leloir galactose mutarotase. Members of this | 100.0 | |
| PRK11055 | 342 | galM galactose-1-epimerase; Provisional | 99.98 | |
| PTZ00485 | 376 | aldolase 1-epimerase; Provisional | 99.97 | |
| KOG1604 | 353 | consensus Predicted mutarotase [Carbohydrate trans | 99.92 | |
| cd09023 | 284 | Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t | 99.83 | |
| PF14486 | 302 | DUF4432: Domain of unknown function (DUF4432); PDB | 99.34 | |
| cd09269 | 293 | deoxyribose_mutarotase deoxyribose mutarotase_like | 99.19 | |
| PF14315 | 274 | DUF4380: Domain of unknown function (DUF4380) | 97.71 | |
| TIGR03593 | 366 | yidC_nterm membrane protein insertase, YidC/Oxa1 f | 91.91 | |
| PF14849 | 270 | YidC_periplas: YidC periplasmic domain; PDB: 3BS6_ | 91.47 | |
| PRK01318 | 521 | membrane protein insertase; Provisional | 89.44 | |
| PF09095 | 278 | DUF1926: Domain of unknown function (DUF1926); Int | 85.55 |
| >KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-67 Score=452.70 Aligned_cols=294 Identities=76% Similarity=1.307 Sum_probs=278.1
Q ss_pred cceEEEecCCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCCCCCCc
Q 036760 7 LPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESH 86 (315)
Q Consensus 7 ~~~~~~~~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~~~~~H 86 (315)
-++++.++.+|++.|.|+++++.+|+|.++||+|+||+..+|+|+||.+..+.+++.+|||||+|+|||+||..+.+++|
T Consensus 12 ~~~~~~k~~~g~~~ivL~~p~g~taev~L~Gg~V~SWK~~~geElLf~S~kA~f~ppKpIRGGIP~~FPQFG~~g~l~qH 91 (305)
T KOG1594|consen 12 MPVELAKGRNGLDKIVLTDPRGSTAEVYLYGGQVVSWKNENGEELLFVSTKAIFKPPKPIRGGIPICFPQFGNFGSLPQH 91 (305)
T ss_pred ccceeecccCCCceEEEeCCCCCeEEEEEeccEEEEeecCCCceeEEechhhhcCCCCcccCCcceEeeccCCCCccccc
Confidence 34788899999999999999999999999999999999877899999999999999999999999999999999999999
Q ss_pred eeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEeee
Q 036760 87 GFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFA 166 (315)
Q Consensus 87 Gf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g 166 (315)
||||++.|.++......+ .-+.+.|.|.|.+++++.+.|||+|++++++.|.+ +.|+++.+|+|+ +++|+.|+++
T Consensus 92 GFaRn~~W~v~~~p~~lp--~~~~a~Vdl~Lk~~~~~~kiWp~~Fe~~lrv~l~~-g~Lt~~~rV~Nt--d~KpFsF~~a 166 (305)
T KOG1594|consen 92 GFARNRFWEVENNPPPLP--SLGKATVDLILKSSEDDLKIWPHSFELRLRVSLGD-GELTLTSRVRNT--DSKPFSFSFA 166 (305)
T ss_pred ccccceeeEeccCCCCCC--cCCceeEEEEecCChhhhhhCCcceEEEEEEEEcC-CceEEEEEeecC--CCCceEEEeE
Confidence 999999999998764333 22457899999999999999999999999999997 899999999999 9999999999
Q ss_pred ccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCCCeEEEEeCCCCcEEEEEeCCCCcEEE
Q 036760 167 YHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVV 246 (315)
Q Consensus 167 ~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~v~~~~~~~~vv 246 (315)
+|+||.++++.+++++|+++..|+|++....++.++.+.++|++++|++|++.+.+..|.|...+++|.|..+|+|+.||
T Consensus 167 lHtYf~vsdisevrveGL~tldylD~~~~~~~~tE~~davTF~~e~DrvYl~tp~e~aI~dh~~krti~l~k~g~pDaVV 246 (305)
T KOG1594|consen 167 LHTYFRVSDISEVRVEGLETLDYLDNLKNRERFTEQRDAVTFNSEVDRVYLNTPTELAIFDHEKKRTIVLKKEGLPDAVV 246 (305)
T ss_pred eeeeEeecccceEEEeccccccccccccchhhccccCceEeeccceeeEEecCCceEEEEEeccccEEEEeccCCCceEE
Confidence 99999999999999999999999998888888888999999999999999999999999999999999999999999999
Q ss_pred eCCccchhccccCCCCCCCCceEEEceeeecCceEeCCCCEEEEEEEEEEeecCCCCCC
Q 036760 247 WNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSYCSGQ 305 (315)
Q Consensus 247 w~p~~~~~~~~~d~~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~~~~~~~~~~~ 305 (315)
||||.++++.|+||++++|++|+|||+..++.+++|+||++|++++.+.+.++++||+|
T Consensus 247 WNPW~kksk~maD~gde~Y~~mlCVe~a~v~~pI~L~PG~eW~g~q~Lsiv~s~~~s~q 305 (305)
T KOG1594|consen 247 WNPWDKKSKTMADFGDEDYKHMLCVESAAVESPITLKPGEEWKGRQLLSIVPSSYCSGQ 305 (305)
T ss_pred eChhHhhhhhhhhccccccceeEEecccccCCceeecCCccceeEEEEEEeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999997
|
|
| >cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like | Back alignment and domain information |
|---|
| >COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 | Back alignment and domain information |
|---|
| >cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX | Back alignment and domain information |
|---|
| >cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB | Back alignment and domain information |
|---|
| >PRK15172 putative aldose-1-epimerase; Provisional | Back alignment and domain information |
|---|
| >cd01081 Aldose_epim aldose 1-epimerase superfamily | Back alignment and domain information |
|---|
| >cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR | Back alignment and domain information |
|---|
| >PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 | Back alignment and domain information |
|---|
| >cd09019 galactose_mutarotase_like galactose mutarotase_like | Back alignment and domain information |
|---|
| >COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN00194 aldose 1-epimerase; Provisional | Back alignment and domain information |
|---|
| >TIGR02636 galM_Leloir galactose mutarotase | Back alignment and domain information |
|---|
| >PRK11055 galM galactose-1-epimerase; Provisional | Back alignment and domain information |
|---|
| >PTZ00485 aldolase 1-epimerase; Provisional | Back alignment and domain information |
|---|
| >KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 | Back alignment and domain information |
|---|
| >PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A | Back alignment and domain information |
|---|
| >cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like | Back alignment and domain information |
|---|
| >PF14315 DUF4380: Domain of unknown function (DUF4380) | Back alignment and domain information |
|---|
| >TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain | Back alignment and domain information |
|---|
| >PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B | Back alignment and domain information |
|---|
| >PRK01318 membrane protein insertase; Provisional | Back alignment and domain information |
|---|
| >PF09095 DUF1926: Domain of unknown function (DUF1926); InterPro: IPR015179 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 315 | ||||
| 2cir_A | 297 | Structure-Based Functional Annotation: Yeast Ymr099 | 1e-32 | ||
| 2ciq_A | 297 | Structure-Based Functional Annotation: Yeast Ymr099 | 1e-32 | ||
| 2hta_A | 309 | Crystal Structure Of A Putative Mutarotase (Yead) F | 1e-27 | ||
| 1jov_A | 270 | Crystal Structure Analysis Of Hi1317 Length = 270 | 3e-23 | ||
| 3k25_A | 289 | Crystal Structure Of Slr1438 Protein From Synechocy | 9e-10 |
| >pdb|2CIR|A Chain A, Structure-Based Functional Annotation: Yeast Ymr099c Codes For A D-Hexose-6-Phosphate Mutarotase. Complex With Glucose-6-Phosphate Length = 297 | Back alignment and structure |
|
| >pdb|2CIQ|A Chain A, Structure-Based Functional Annotation: Yeast Ymr099c Codes For A D-Hexose-6-Phosphate Mutarotase Length = 297 | Back alignment and structure |
| >pdb|2HTA|A Chain A, Crystal Structure Of A Putative Mutarotase (Yead) From Salmonella Typhimurium In Orthorhombic Form Length = 309 | Back alignment and structure |
| >pdb|1JOV|A Chain A, Crystal Structure Analysis Of Hi1317 Length = 270 | Back alignment and structure |
| >pdb|3K25|A Chain A, Crystal Structure Of Slr1438 Protein From Synechocystis Sp. Pcc 6803, Northeast Structural Genomics Consortium Target Sgr112 Length = 289 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 315 | |||
| 2cir_A | 297 | Hexose-6-phosphate mutarotase; hypothetical protei | 1e-105 | |
| 2hta_A | 309 | Putative enzyme related to aldose 1-epimerase; car | 1e-101 | |
| 3k25_A | 289 | SLR1438 protein; structural genomics, PSI-2, prote | 2e-79 | |
| 1jov_A | 270 | HI1317; hypothetical protein, structure 2 function | 4e-78 | |
| 3dcd_A | 307 | Galactose mutarotase related enzyme; Q5FKD7 LAR33 | 2e-41 | |
| 3q1n_A | 294 | Galactose mutarotase related enzyme; structural ge | 1e-39 | |
| 3os7_A | 341 | Galactose mutarotase-like protein; structural geno | 2e-21 | |
| 3mwx_A | 326 | Aldose 1-epimerase; structural genomics, joint cen | 4e-16 | |
| 3nre_A | 291 | Aldose 1-epimerase; structural genomics, joint cen | 1e-15 | |
| 3ty1_A | 384 | Hypothetical aldose 1-epimerase; supersandwich, st | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Length = 297 | Back alignment and structure |
|---|
Score = 307 bits (787), Expect = e-105
Identities = 94/302 (31%), Positives = 133/302 (44%), Gaps = 23/302 (7%)
Query: 17 GLDKVVLRESRGS--SAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICF 74
+VVL S + YG V SWK EE L++S+ A K +RGGIP+ F
Sbjct: 6 TDKEVVLTHPADETTSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVF 64
Query: 75 PQFASL------GSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRP---SEEDLK 125
P F L HG ARN W + + L+P + E K
Sbjct: 65 PVFGKNSTDEHLSKLPQHGLARNSTWEFL------GQTKENPPTVQFGLKPEIANPELTK 118
Query: 126 IWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLE 185
+WP + L V L L V NTS+ K F + +HTYF + DI V L
Sbjct: 119 LWPMDYLLILTVELGSDY-LKTAIEVENTSSS-KELKFNWLFHTYFRIEDIEGTMVSNLA 176
Query: 186 TLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHE-KKRTFVIRKDGLPDA 244
+ D L KE + ++ +TF E D IY + + AI + + +++ LPD
Sbjct: 177 GMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRYNLPDT 235
Query: 245 VVWNPWDKKAKAMADFGDDE-YKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSYCS 303
VVWNPW +K++ MADF Y+ M+C+E V I+L PG++W L Y +
Sbjct: 236 VVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEELKYQA 295
Query: 304 GQ 305
Q
Sbjct: 296 IQ 297
|
| >2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Length = 309 | Back alignment and structure |
|---|
| >3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Length = 289 | Back alignment and structure |
|---|
| >1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Length = 270 | Back alignment and structure |
|---|
| >3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Length = 307 | Back alignment and structure |
|---|
| >3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Length = 294 | Back alignment and structure |
|---|
| >3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 | Back alignment and structure |
|---|
| >3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 | Back alignment and structure |
|---|
| >3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 | Back alignment and structure |
|---|
| >3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Length = 384 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 315 | |||
| 2hta_A | 309 | Putative enzyme related to aldose 1-epimerase; car | 100.0 | |
| 2cir_A | 297 | Hexose-6-phosphate mutarotase; hypothetical protei | 100.0 | |
| 1jov_A | 270 | HI1317; hypothetical protein, structure 2 function | 100.0 | |
| 3k25_A | 289 | SLR1438 protein; structural genomics, PSI-2, prote | 100.0 | |
| 3q1n_A | 294 | Galactose mutarotase related enzyme; structural ge | 100.0 | |
| 3dcd_A | 307 | Galactose mutarotase related enzyme; Q5FKD7 LAR33 | 100.0 | |
| 3nre_A | 291 | Aldose 1-epimerase; structural genomics, joint cen | 100.0 | |
| 3os7_A | 341 | Galactose mutarotase-like protein; structural geno | 100.0 | |
| 3mwx_A | 326 | Aldose 1-epimerase; structural genomics, joint cen | 100.0 | |
| 1yga_A | 342 | Hypothetical 37.9 kDa protein in BIO3-HXT17 interg | 100.0 | |
| 1snz_A | 344 | Aldose 1-epimerase; mutarotase, galactosemia, isom | 100.0 | |
| 1lur_A | 339 | Aldose 1-epimerase; vitamin B12, methyltransferase | 100.0 | |
| 1nsx_A | 347 | Galactose mutarotase; epimerase, galactose metabol | 100.0 | |
| 3imh_A | 338 | Galactose-1-epimerase; structural genomics, PSI-2, | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3ty1_A | 384 | Hypothetical aldose 1-epimerase; supersandwich, st | 99.91 | |
| 3bs6_A | 280 | Inner membrane protein OXAA; YIDC/OXA1/ALB3 family | 93.71 | |
| 3blc_A | 330 | Inner membrane protein OXAA; YIDC, membrane assemb | 92.11 |
| >2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-52 Score=386.19 Aligned_cols=274 Identities=29% Similarity=0.489 Sum_probs=239.4
Q ss_pred ceEEEecCCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCC--CCCC
Q 036760 8 PVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG--SLES 85 (315)
Q Consensus 8 ~~~~~~~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~--~~~~ 85 (315)
.+++.. .++++.++|+|+ +++|+|..+||+|+||+.++|+|+||.++.+.|...+++|||+|+||||+||+. .+++
T Consensus 32 ~~~~~~-~~~~~~~~L~n~-~~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~~ 109 (309)
T 2hta_A 32 VLSRRQ-LDDLDLIVVDHP-QVKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLPS 109 (309)
T ss_dssp SEEEEE-ETTEEEEEEEET-TEEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCCT
T ss_pred ceEEee-cCCceEEEEeCC-CeEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCCCCC
Confidence 377876 889999999999 599999999999999998656899999888888888899999999999999996 5799
Q ss_pred ceeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEee
Q 036760 86 HGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTF 165 (315)
Q Consensus 86 HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~ 165 (315)
|||+|++.|++++... +++.++++|+|.++++++++|||+|+++++|+| + ++|+++++++| +|||++
T Consensus 110 HGfar~~~W~v~~~~~-----~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~-~~L~i~~~~~N------~~~~~~ 176 (309)
T 2hta_A 110 HGFARNLPWALKAHNE-----DDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-G-KTCEIELEAHG------EFATTS 176 (309)
T ss_dssp TBSGGGSBCEEEEEEE-----CSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-S-SSEEEEEEEES------SEEEEE
T ss_pred ccCcCCCceEEEeEec-----CCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-C-CceEEEEEEEC------CeEehh
Confidence 9999999999987631 122367999999877788999999999999999 7 89999999975 799999
Q ss_pred eccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCCCeEEEEeCCCCcEEEEEeCCCCcEE
Q 036760 166 AYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAV 245 (315)
Q Consensus 166 g~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~v~~~~~~~~v 245 (315)
|+||||+++++.++.+.++ +..|+|++++++.....+..++|..++|++|.+....++|.++.+++.|+|.++++|++|
T Consensus 177 g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~ 255 (309)
T 2hta_A 177 ALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVV 255 (309)
T ss_dssp EECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEE
T ss_pred cCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEE
Confidence 9999999998777888877 677888777766544556778999999999986556789999999999999998899999
Q ss_pred EeCCccchhccccCCCCCCCCceEEEceeeecCceEeCCCCEEEEEEEEEEe
Q 036760 246 VWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGV 297 (315)
Q Consensus 246 vw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~~~ 297 (315)
||||+.++++.|.|+.+++|++|||||||+..+.++|+|||+|+.+++|++.
T Consensus 256 vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 256 GWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred EECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 9999755666778888888899999999998778999999999999999986
|
| >2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* | Back alignment and structure |
|---|
| >1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 | Back alignment and structure |
|---|
| >3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} | Back alignment and structure |
|---|
| >3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} | Back alignment and structure |
|---|
| >3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
| >3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} | Back alignment and structure |
|---|
| >3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
| >3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* | Back alignment and structure |
|---|
| >1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 | Back alignment and structure |
|---|
| >1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* | Back alignment and structure |
|---|
| >3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
| >3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
| >3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 315 | ||||
| d1jova_ | 269 | b.30.5.7 (A:) Hypothetical protein HI1317 {Haemoph | 4e-84 |
| >d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Length = 269 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: Hypothetical protein HI1317 domain: Hypothetical protein HI1317 species: Haemophilus influenzae [TaxId: 727]
Score = 252 bits (644), Expect = 4e-84
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 32/287 (11%)
Query: 9 VEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHG-EELLFVSSKATFKPPKAIR 67
+ + +N + + L+ + G+ A++ L G + SWK + +++L++S FK AIR
Sbjct: 13 LHLVQ-HNDIPVLHLKHAVGT-AKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIR 70
Query: 68 GGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIW 127
GG+PIC+P F + +HG AR R W + + E +L
Sbjct: 71 GGVPICYPWFGGVK-QPAHGTARIRLWQLSHYYI------------SVHKVRLEFELFSD 117
Query: 128 PHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETL 187
+ E ++ + T + T S A HTYF++ DI++V V+GL
Sbjct: 118 LNIIEAKVSMVFT------DKCHLTFTHY--GEESAQAALHTYFNIGDINQVEVQGLPET 169
Query: 188 DYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVW 247
+ Q +E VD IY + + ILD RT + V+W
Sbjct: 170 CFNSLNQQQE---NVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLW 226
Query: 248 NPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLEL 294
NPW KK M++ G Y+ MLC+E A + L+ GE + L
Sbjct: 227 NPWHKKTSGMSETG---YQKMLCLETARIHH--LLEFGESLSVEISL 268
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 315 | |||
| d1jova_ | 269 | Hypothetical protein HI1317 {Haemophilus influenza | 100.0 | |
| d1z45a1 | 342 | Galactose mutarotase {Baker's yeast (Saccharomyces | 99.97 | |
| d1nsza_ | 340 | Galactose mutarotase {Lactococcus lactis [TaxId: 1 | 99.97 | |
| d1lura_ | 329 | Aldose 1-epimerase homologue {Nematode (Caenorhabd | 99.97 | |
| d1so0a_ | 344 | Galactose mutarotase {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1k1xa2 | 275 | 4-alpha-glucanotransferase, C-terminal domain {Arc | 88.38 |
| >d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: Hypothetical protein HI1317 domain: Hypothetical protein HI1317 species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=1.1e-53 Score=385.23 Aligned_cols=257 Identities=28% Similarity=0.496 Sum_probs=213.2
Q ss_pred ceEEEecCCCceEEEEecCCCcEEEEEcCCeEEEEEEeC-CCeeEEEeCCCCCCCCCCCccccccEEccccCCCCCCCCc
Q 036760 8 PVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKND-HGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESH 86 (315)
Q Consensus 8 ~~~~~~~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~~~~~H 86 (315)
.|++.+ .+++++++|+|+. .+|+|+.+||+|+||+.+ +++|+||+++.+.|+..++||||+|+||||||+. .+++|
T Consensus 12 ~~~~~~-~~~l~~i~i~~~~-~~a~i~~~Ga~l~s~~~~~~~~e~Lw~s~~a~~~~~~~IRGGiPi~fP~fG~~-~~p~H 88 (269)
T d1jova_ 12 ELHLVQ-HNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGV-KQPAH 88 (269)
T ss_dssp TEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGG-SSSTT
T ss_pred eEEeec-cCCccEEEEeCCC-EEEEEECCCCEEEEEEECCCCceEEEeCChhhccCCCcccCCcceeCcccCCC-CCCCC
Confidence 378888 7899999999995 999999999999999985 4579999999999999999999999999999985 57999
Q ss_pred eeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEeee
Q 036760 87 GFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFA 166 (315)
Q Consensus 87 Gf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g 166 (315)
||||++.|+|++.+. +...+.+++. ...|||.|+++++|+|+- +++|+|+ ++++|||++|
T Consensus 89 GFAR~~~w~l~~~~~-------~~~~~~l~~~-----l~~~~~~f~~~~~~~ltl------~~~l~n~--~~~~~pf~~g 148 (269)
T d1jova_ 89 GTARIRLWQLSHYYI-------SVHKVRLEFE-----LFSDLNIIEAKVSMVFTD------KCHLTFT--HYGEESAQAA 148 (269)
T ss_dssp BSGGGSBCEEEEEEE-------ETTEEEEEEE-----EECTTSCEEEEEEEEESS------SEEEEEE--ECCSSCEEEE
T ss_pred ccccccceEEEEEec-------CCceEEEEEE-----eccCCCcceEEEEEEecc------EEEEEEc--cCCCccceec
Confidence 999999999998742 2333444332 235888999999998863 2345567 6678999999
Q ss_pred ccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCCCeEEEEeCCCCcEEEEEeCCCCcEEE
Q 036760 167 YHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVV 246 (315)
Q Consensus 167 ~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~v~~~~~~~~vv 246 (315)
+||||++++..++.+.|+++..|.+ ..... ....+.+.+.+++|++|.+.+..+.|.|+..+++|+|..+|++++||
T Consensus 149 ~HpyF~v~d~~~~~v~gl~~~~~~~-~~~~~--~~~~~~~~~~~~~D~i~~~~~~~~~i~d~~~~~~i~v~~~g~~~~vV 225 (269)
T d1jova_ 149 LHTYFNIGDINQVEVQGLPETCFNS-LNQQQ--ENVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVL 225 (269)
T ss_dssp ECCEEECSCGGGEEEESCCSEEEET-TTTEE--EECCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEE
T ss_pred ccceEecCCccceEEecCCcccccc-ccccc--cccCCCcccCcCeeEEecCCCCcEEEEeCCCCCEEEEEEeCCCcEEE
Confidence 9999999999999999988766544 22222 22345677888999999988888999999999999999999999999
Q ss_pred eCCccchhccccCCCCCCCCceEEEceeeecCceEeCCCCEEEEEEEEE
Q 036760 247 WNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELS 295 (315)
Q Consensus 247 w~p~~~~~~~~~d~~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~ 295 (315)
||||.++++ +|.+++|++||||||+.+. .+|+|||+|+++++|+
T Consensus 226 WnP~~~~a~---~~~d~~~~~fvCVEp~~~~--~~L~PGes~~~~~~ir 269 (269)
T d1jova_ 226 WNPWHKKTS---GMSETGYQKMLCLETARIH--HLLEFGESLSVEISLK 269 (269)
T ss_dssp EECTTSCCT---TCCTTGGGGEEEEEEEEEE--EEECTTCEEEEEEEEC
T ss_pred ECCccchhc---cccccCCCCEEEECcccCC--ceECCCCeEEEEEEEC
Confidence 999987664 5666789999999998864 4799999999998874
|
| >d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|