Citrus Sinensis ID: 036909

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccEEEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEcccHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccEEEEEEEcHcccHHHHHHHHHHHHHHcccccccccEccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MGIRLPGFILAKQILRQSALTAkkgastsldvpkGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEeefgfnhpmggltipceentfiDITSRLERS
Flexible Loop (DISEMBL)
MGIRLPGFILAKQILRQSALTAkkgastsldvpkGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHpmggltipceentfIDITSRLERS
Low Complexity Region (SEG)
MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS
Disordered region (IsUnstruct)
****LPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDI*******
Disordered Region (DISOPRED)
MGIR***FILA************************FLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLE**
Disordered Region (DISEMBL)
MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS
Disordered Region (DISPRO)
*GIRLPGFILAKQILRQSALTAK***STSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
P33080	92	Auxin-induced protein X10	no	no	0.89	0.967	0.587	2e-28
P32295	92	Indole-3-acetic acid-indu	N/A	no	0.89	0.967	0.608	7e-27
P33083	90	Auxin-induced protein 6B	no	no	0.89	0.988	0.587	1e-26
P33079	93	Auxin-induced protein 10A	no	no	0.9	0.967	0.546	1e-25
P33081	82	Auxin-induced protein 15A	no	no	0.81	0.987	0.597	5e-25
P33082	82	Auxin-induced protein X15	no	no	0.81	0.987	0.567	3e-24

>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1

 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 77/97 (79%), Gaps = 8/97 (8%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG       +R++++ A + +S S++VPKG+L VYVG+  R RFL+PVSYLNQP 
Sbjct: 1  MGFRLPG-------IRKTSIAANQASSKSVEVPKGYLVVYVGDKMR-RFLIPVSYLNQPS 52

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLL++AEEEFG++HPMGGLTIPC+E+ F+ +TS L
Sbjct: 53 FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHL 89

Glycine max (taxid: 3847)

>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1

 Score =  119 bits (297), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 8/97 (8%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG       +R++     + +S  LD PKG+LAVYVGE   KRF++PVS+LNQPL
Sbjct: 1  MGFRLPG-------IRKTLSARNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQPL 52

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLLS+AEEEFG++HPMGGLTIPC E+ F  ITS L
Sbjct: 53 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89

Vigna radiata var. radiata (taxid: 3916)

>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 74/97 (76%), Gaps = 8/97 (8%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG       +R+++ +A + +S ++DV KG+LAVYVGE  R RF++PVSYLN+P 
Sbjct: 1  MGFRLPG-------IRKASFSANQASSKAVDVEKGYLAVYVGEKMR-RFVIPVSYLNKPS 52

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLLS+AEEEFG++HP GGLTIPC E+ F  ITS L
Sbjct: 53 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89

Glycine max (taxid: 3847)

>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 73/97 (75%), Gaps = 7/97 (7%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG R+ G      I+R+++    + AS  +DVPKG+ AVYVG+  R RF +PVSYLN+P 
Sbjct: 1  MGFRIAG------IVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMR-RFTIPVSYLNEPS 53

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQ+LLS+AEEEFG++HPMGGLTIPC+E  F+++T+ L
Sbjct: 54 FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHL 90

Glycine max (taxid: 3847)

>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 16/97 (16%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG                + AS + D PKG+LAVYVGE + KRF++PVSYLNQP 
Sbjct: 1  MGFRLPGI---------------RKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 44

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLLS+AEEEFG++HPMGGLTIPC E+ F  ITS L
Sbjct: 45 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81

Glycine max (taxid: 3847)

>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 16/97 (16%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG                + AS ++D PKG+LAVYVGE + KRF++PVSY+NQP 
Sbjct: 1  MGFRLPGI---------------RKASNAVDAPKGYLAVYVGE-KMKRFVIPVSYMNQPS 44

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLL++AEEEFG++HPMGGLTIPC E  F  IT  L
Sbjct: 45 FQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCL 81

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
224103287	98	SAUR family protein [Populus trichocarpa	0.97	0.989	0.737	5e-35
224103293	99	SAUR family protein [Populus trichocarpa	0.98	0.989	0.737	1e-34
224080528	99	SAUR family protein [Populus trichocarpa	0.91	0.919	0.747	6e-34
224080530	99	SAUR family protein [Populus trichocarpa	0.92	0.929	0.760	1e-33
224103297	91	SAUR family protein [Populus trichocarpa	0.91	1.0	0.7	6e-32
2924327	99	hypothetical protein [Malus x domestica]	0.97	0.979	0.639	8e-32
224103295	92	SAUR family protein [Populus trichocarpa	0.92	1.0	0.69	1e-31
356517873	100	PREDICTED: auxin-induced protein 10A5-li	0.98	0.98	0.673	3e-31
449531962	100	PREDICTED: auxin-induced protein X10A-li	1.0	1.0	0.6	4e-31
388490922	100	unknown [Lotus japonicus]	0.99	0.99	0.636	5e-31

>gi|224103287|ref|XP_002312996.1| SAUR family protein [Populus trichocarpa] gi|222849404|gb|EEE86951.1| SAUR family protein [Populus trichocarpa]

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/99 (73%), Positives = 83/99 (83%), Gaps = 2/99 (2%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          M IRLPG  LAKQ LR+S  TA K +S  LDVPKGFLAVYVGET++KRF+VPVSYLNQP 
Sbjct: 1  MAIRLPG--LAKQSLRRSFSTANKASSKYLDVPKGFLAVYVGETEKKRFVVPVSYLNQPS 58

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99
          FQDLLS+AE+EFGF+HPMGGLTIPC E TF+ +TS L R
Sbjct: 59 FQDLLSKAEDEFGFDHPMGGLTIPCAEETFLHVTSSLSR 97

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103293|ref|XP_002312998.1| SAUR family protein [Populus trichocarpa] gi|222849406|gb|EEE86953.1| SAUR family protein [Populus trichocarpa]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 1/99 (1%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          M IRL GF LAKQ LR+    A K AS S DVPKGFLAVYVGET++KRF+VPVSYLNQ  
Sbjct: 1  MAIRLLGF-LAKQSLRRPVSCAHKAASKSSDVPKGFLAVYVGETEKKRFVVPVSYLNQAS 59

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99
          FQDLLS+AEEEFGF+HPMGGLTIPC E+TF+D+TS L R
Sbjct: 60 FQDLLSKAEEEFGFDHPMGGLTIPCAEDTFLDVTSSLSR 98

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080528|ref|XP_002306151.1| SAUR family protein [Populus trichocarpa] gi|222849115|gb|EEE86662.1| SAUR family protein [Populus trichocarpa]

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 78/91 (85%)

Query: 10  LAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAE 69
           LAKQILR+S   A K AS SLDVPKGFLAVY+GE ++KRF+VPVSYLN+P FQDLL++AE
Sbjct: 9   LAKQILRRSVWNASKPASRSLDVPKGFLAVYIGEREKKRFVVPVSYLNEPSFQDLLTKAE 68

Query: 70  EEFGFNHPMGGLTIPCEENTFIDITSRLERS 100
           EEFGFNHPMGGLTIPC E+ FID+ S L RS
Sbjct: 69  EEFGFNHPMGGLTIPCREDKFIDVLSSLSRS 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080530|ref|XP_002306152.1| SAUR family protein [Populus trichocarpa] gi|222849116|gb|EEE86663.1| SAUR family protein [Populus trichocarpa]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 76/92 (82%)

Query: 9   ILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRA 68
           ILAKQIL +S     K AS S DVPKGFLAVYVGE  +KRF+VPVSYLN+P FQDLLS+A
Sbjct: 8   ILAKQILCRSVWITNKSASRSSDVPKGFLAVYVGEMDKKRFVVPVSYLNEPSFQDLLSKA 67

Query: 69  EEEFGFNHPMGGLTIPCEENTFIDITSRLERS 100
           EEEFGFNHPMGGLTIPC E+TFIDI S L RS
Sbjct: 68  EEEFGFNHPMGGLTIPCREDTFIDILSSLSRS 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103297|ref|XP_002313000.1| SAUR family protein [Populus trichocarpa] gi|222849408|gb|EEE86955.1| SAUR family protein [Populus trichocarpa]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 9/100 (9%)

Query: 1   MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
           M IRL G  LAKQI R+S        S S DVPKGF+AVYVGET++KRF+VPVSYLNQP+
Sbjct: 1   MAIRLTG-SLAKQIFRRS--------SKSFDVPKGFVAVYVGETEKKRFVVPVSYLNQPI 51

Query: 61  FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS 100
           FQDLL +AEEEFGF+HPMGGLTIPC E+TFI +TS L RS
Sbjct: 52  FQDLLCKAEEEFGFDHPMGGLTIPCREDTFIHVTSSLSRS 91

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2924327|emb|CAB07785.1| hypothetical protein [Malus x domestica]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 80/97 (82%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          MG RLPG + AK+ L +S   +K+ AS +LD+PKG+ AVY GE Q+KRF++P+SYLN PL
Sbjct: 1  MGFRLPGIVSAKRSLIRSLSNSKQTASKTLDIPKGYFAVYAGERQKKRFVIPISYLNDPL 60

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
          FQDLLS+AEEEFG++HPMGG+TIPC E TF+ +TSRL
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEYTFLHLTSRL 97

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103295|ref|XP_002312999.1| SAUR family protein [Populus trichocarpa] gi|222849407|gb|EEE86954.1| SAUR family protein [Populus trichocarpa]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 80/100 (80%), Gaps = 8/100 (8%)

Query: 1   MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
           M IR P  +LAK+I RQS+       S SLDV KGF+AVYVGE  +KRFLVPVSYLNQPL
Sbjct: 1   MAIRFPS-VLAKKIPRQSS-------SKSLDVQKGFIAVYVGEADKKRFLVPVSYLNQPL 52

Query: 61  FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS 100
           F+DLL +AEEEFGF+HPMGGLTIPC+E TF+D+TS L RS
Sbjct: 53  FRDLLCKAEEEFGFDHPMGGLTIPCDEETFLDVTSSLSRS 92

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517873|ref|XP_003527610.1| PREDICTED: auxin-induced protein 10A5-like [Glycine max]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 77/98 (78%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          M IRLP  + AK ILR+S L A   A+TSLDVPKG  AVYVGE ++KRF++PVSYLNQP 
Sbjct: 1  MAIRLPSILSAKYILRRSNLFANHAATTSLDVPKGHFAVYVGEGEKKRFVIPVSYLNQPS 60

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLE 98
          FQ+LLS AEEEFGF+HPMGGL IPC E  F++ITS L 
Sbjct: 61 FQELLSIAEEEFGFSHPMGGLIIPCTEEIFLNITSGLH 98

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531962|ref|XP_004172954.1| PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 79/100 (79%)

Query: 1   MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
           MG RLP  + AKQ L++S+ T    +  ++DVPKG+  VYVGE Q+KRF++P+SYLNQP 
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLERS 100
           FQDLLS++EEEFG+NHPMGG+TIPC E+ F+D+T RL  S
Sbjct: 61  FQDLLSQSEEEFGYNHPMGGITIPCSEDCFLDVTERLNDS 100

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490922|gb|AFK33527.1| unknown [Lotus japonicus]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 80/99 (80%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60
          M IRL   + AK+ILR S+L A + A+TSLDVPKG+ AVYVGE+++KRF++PVS LNQP 
Sbjct: 1  MAIRLSSALSAKRILRGSSLFANQAAATSLDVPKGYFAVYVGESEKKRFVIPVSLLNQPS 60

Query: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99
          FQ+LLS AEEEFGF+HPMGGL IPC E+ F+++ S L R
Sbjct: 61 FQELLSAAEEEFGFSHPMGGLIIPCTEDIFVEVASGLHR 99

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
TAIR|locus:2141772	99	AT4G38840 "AT4G38840" [Arabido	0.96	0.969	0.670	2.3e-30
TAIR|locus:2079389	96	SAUR29 "AT3G03820" [Arabidopsi	0.88	0.916	0.659	1.5e-26
TAIR|locus:2161558	88	AT5G18030 "AT5G18030" [Arabido	0.84	0.954	0.686	1.5e-26
TAIR|locus:2161543	91	SAUR20 "AT5G18020" [Arabidopsi	0.82	0.901	0.674	1.9e-26
TAIR|locus:2172299	90	SAUR24 "AT5G18080" [Arabidopsi	0.81	0.9	0.681	1.9e-26
TAIR|locus:2161573	90	SAUR22 "AT5G18050" [Arabidopsi	0.88	0.977	0.617	3.2e-26
TAIR|locus:2161518	90	SAUR23 "AT5G18060" [Arabidopsi	0.87	0.966	0.636	3.2e-26
TAIR|locus:2079344	93	SAUR26 "AT3G03850" [Arabidopsi	0.84	0.903	0.688	3.6e-25
TAIR|locus:2161538	90	SAUR19 "AT5G18010" [Arabidopsi	0.82	0.911	0.674	3.6e-25
TAIR|locus:2079359	95	SAUR27 "AT3G03840" [Arabidopsi	0.74	0.778	0.706	9.7e-25

TAIR|locus:2141772 AT4G38840 "AT4G38840" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 65/97 (67%), Positives = 78/97 (80%)

Query:     1 MGIRLPGFILA-KQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQP 59
             M IR+P  + + KQILRQ+ L +   +S+SLDVPKG+LAVYVGE   KRF+VPVSYL+QP
Sbjct:     1 MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query:    60 LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSR 96
              FQDLL +AEEEFGF+HPMGGLTIPC E  FID+ SR
Sbjct:    61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=RCA

TAIR|locus:2079389 SAUR29 "AT3G03820" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 62/94 (65%), Positives = 73/94 (77%)

Query:     7 GFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRK--RFLVPVSYLNQPLFQDL 64
             GF+ AK+IL  S    +K  S     PKGFLAVYVGE+QRK  R LVPVSYLNQPLFQ L
Sbjct:     6 GFMAAKKILGGSVAGTRKETSA----PKGFLAVYVGESQRKKQRHLVPVSYLNQPLFQAL 61

Query:    65 LSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLE 98
             L +AEEEFGFNHPMGGLTIPC E+TF+ +TS+++
Sbjct:    62 LIKAEEEFGFNHPMGGLTIPCPEDTFLTVTSQIQ 95

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161558 AT5G18030 "AT5G18030" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 59/86 (68%), Positives = 73/86 (84%)

Query:    15 LRQSALTAKK--GASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEF 72
             L +S L AKK    ST+   PKGFLAVYVGE+Q+KR+LVP+SYL+QP FQ LLS++EEEF
Sbjct:     3 LVRSLLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEF 62

Query:    73 GFNHPMGGLTIPCEENTFIDITSRLE 98
             GF+HPMGGLTIPC E+TFI++TSRL+
Sbjct:    63 GFDHPMGGLTIPCPEDTFINVTSRLQ 88

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161543 SAUR20 "AT5G18020" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 60/89 (67%), Positives = 73/89 (82%)

Query:    11 AKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEE 70
             AK+IL +S  TA   A      PKGFLAVYVGE+Q+KR+LVP+SYLNQP FQ LLS++EE
Sbjct:    10 AKKILSRST-TAASAA------PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 62

Query:    71 EFGFNHPMGGLTIPCEENTFIDITSRLER 99
             EFGF+HPMGGLTIPC E+TFI++TSR +R
Sbjct:    63 EFGFDHPMGGLTIPCPEDTFINVTSRFQR 91

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2172299 SAUR24 "AT5G18080" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 60/88 (68%), Positives = 74/88 (84%)

Query:    11 AKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEE 70
             AK+IL +S      GA ++   PKGFLAVYVGE+Q+KR+LVPVSYLNQP FQ LLS++EE
Sbjct:    10 AKKILSRST-----GAGSA--APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 62

Query:    71 EFGFNHPMGGLTIPCEENTFIDITSRLE 98
             EFGF+HPMGGLTIPC E+TFI++TSRL+
Sbjct:    63 EFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161573 SAUR22 "AT5G18050" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 55/89 (61%), Positives = 73/89 (82%)

Query:    10 LAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAE 69
             L + +L    + ++  A+ S   PKGFLAVYVGE+Q+KR+LVP+SYLNQP FQ LLS++E
Sbjct:     3 LVRSLLGAKKILSRSTAAVSA-APKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 61

Query:    70 EEFGFNHPMGGLTIPCEENTFIDITSRLE 98
             +EFGF+HPMGGLTIPC E+TFI++TSRL+
Sbjct:    62 DEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161518 SAUR23 "AT5G18060" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query:    10 LAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAE 69
             L + +L    + ++  A+ S   PKGFLAVYVGE+Q+KR+LVP+SYLNQP FQ LLS++E
Sbjct:     3 LVRSLLVAKKILSRSAAAVSAP-PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 61

Query:    70 EEFGFNHPMGGLTIPCEENTFIDITSRL 97
             EEFGF+HPMGGLTIPC E+TFI++TSRL
Sbjct:    62 EEFGFDHPMGGLTIPCPEDTFINVTSRL 89

GO:0003674 "molecular_function" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2079344 SAUR26 "AT3G03850" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 62/90 (68%), Positives = 71/90 (78%)

Query:    15 LRQSALTAKK--GAS---TSLDVPKGFLAVYVGETQRK-RFLVPVSYLNQPLFQDLLSRA 68
             L +S  +AKK  G S   TS   PKGFLAVYVGE+Q+K R  VPVSYLNQPLFQDLLS+ 
Sbjct:     3 LVRSLFSAKKILGGSLVKTSKAPPKGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKC 62

Query:    69 EEEFGFNHPMGGLTIPCEENTFIDITSRLE 98
             EEEFGF+HPMGGLTIPC  +TFI ITS+L+
Sbjct:    63 EEEFGFDHPMGGLTIPCPVDTFISITSQLQ 92

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161538 SAUR19 "AT5G18010" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 58/86 (67%), Positives = 71/86 (82%)

Query:    17 QSALTAKK--GASTSLD--VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEF 72
             +S L AKK    ST+     PKGFLAVYVGE+Q+KR+LVP+SYL+QP FQ LLS++EEEF
Sbjct:     5 RSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEF 64

Query:    73 GFNHPMGGLTIPCEENTFIDITSRLE 98
             GF HPMGGLTIPC E+TFI++TSRL+
Sbjct:    65 GFAHPMGGLTIPCPEDTFINVTSRLQ 90

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2079359 SAUR27 "AT3G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 53/75 (70%), Positives = 65/75 (86%)

Query:    25 GASTSLDVPKGFLAVYVGETQRK-RFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTI 83
             G   S   PKGFLAVYVGE+Q+K R+LV VSYL+QPLFQDLLS++EEEFGF+HPMGGLTI
Sbjct:    20 GMRKSTSAPKGFLAVYVGESQKKQRYLVLVSYLSQPLFQDLLSKSEEEFGFDHPMGGLTI 79

Query:    84 PCEENTFIDITSRLE 98
             PC E+TF+ +TSR++
Sbjct:    80 PCPEDTFLTVTSRIQ 94

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32295	ARG7_VIGRR	No assigned EC number	0.6082	0.89	0.9673	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	100
pfam02519	99	pfam02519, Auxin_inducible, Auxin responsive prote	4e-41
PLN03220	105	PLN03220, PLN03220, uncharacterized protein; Provi	2e-31
PLN03090	104	PLN03090, PLN03090, auxin-responsive family protei	2e-30
PLN03219	108	PLN03219, PLN03219, uncharacterized protein; Provi	3e-28

>gnl|CDD|217082 pfam02519, Auxin_inducible, Auxin responsive protein

 Score =  130 bits (328), Expect = 4e-41
 Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 5/101 (4%)

Query: 1  MGIRLPGFILAKQILRQSALTAKKG---ASTSLDVPKGFLAVYVGETQRKRFLVPVSYLN 57
          M  RL     AK+ +  +A    +G    S+S DVPKG  AVYVGE + +RF+VP+SYLN
Sbjct: 1  MASRLKKASSAKKWILSAASGRSRGSSSKSSSADVPKGHFAVYVGE-ETRRFVVPISYLN 59

Query: 58 QPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLE 98
           PLFQ+LL RAEEEFGF+   GGLTIPC+   F  +   LE
Sbjct: 60 HPLFQELLDRAEEEFGFDQ-DGGLTIPCDVVVFEHLLWMLE 99

This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role. Length = 99

>gnl|CDD|178759 PLN03220, PLN03220, uncharacterized protein; Provisional

 Score =  106 bits (265), Expect = 2e-31
 Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 6/93 (6%)

Query: 12  KQILRQSALTAKK--GASTSLDVPKGFLAVYVGE---TQRKRFLVPVSYLNQPLFQDLLS 66
           KQIL+ ++L  +    +S+S  VPKG +AVYVGE    ++KRF+VP+S+LN P F++ LS
Sbjct: 13  KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 67  RAEEEFGFNHPMGGLTIPCEENTFID-ITSRLE 98
           RAEEEFGFNHPMGGLTIPC E  F+D I SRL 
Sbjct: 73  RAEEEFGFNHPMGGLTIPCREEVFLDLIASRLH 105

Length = 105

>gnl|CDD|178639 PLN03090, PLN03090, auxin-responsive family protein; Provisional

 Score =  103 bits (259), Expect = 2e-30
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 6/98 (6%)

Query: 4   RLPGFILAKQIL-RQSALTAKKG---ASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQP 59
           +L    + KQIL R S+L  K+G       LDVPKG   VYVGE  R R++VP+S+L  P
Sbjct: 8   KLTQTAMLKQILKRCSSLGKKQGYDEDGLPLDVPKGHFPVYVGE-NRSRYIVPISFLTHP 66

Query: 60  LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97
            FQ LL +AEEEFGF+H M GLTIPCEE  F  +TS +
Sbjct: 67  EFQSLLQQAEEEFGFDHDM-GLTIPCEEVVFRSLTSMI 103

Length = 104

>gnl|CDD|178758 PLN03219, PLN03219, uncharacterized protein; Provisional

 Score = 98.3 bits (244), Expect = 3e-28
 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 8/89 (8%)

Query: 11 AKQILRQSALTAKKGAS-------TSLDVPKGFLAVYVGE-TQRKRFLVPVSYLNQPLFQ 62
          AKQI +  ++  K G+S       TS  VPKG +AVYVGE  ++KRF+VP+SYLN PLF+
Sbjct: 11 AKQIFKSQSMRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFR 70

Query: 63 DLLSRAEEEFGFNHPMGGLTIPCEENTFI 91
          + L+RAEEE GF+H MGGLTIPC E +F+
Sbjct: 71 EFLNRAEEECGFHHSMGGLTIPCREESFL 99

Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
PLN03090	104	auxin-responsive family protein; Provisional	100.0
PLN03220	105	uncharacterized protein; Provisional	100.0
PLN03219	108	uncharacterized protein; Provisional	100.0
PF02519	100	Auxin_inducible: Auxin responsive protein; InterPr	100.0
PF02214	94	BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi	88.29
PRK02899	197	adaptor protein; Provisional	83.54

>PLN03090 auxin-responsive family protein; Provisional

Probab=100.00  E-value=2.4e-42  Score=239.92  Aligned_cols=96  Identities=51%  Similarity=0.867  Sum_probs=87.8

Q ss_pred             CCccchh----HHHHHHHHHHhhhhhhcCC----CCcCCCCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhc
Q 036909            1 MGIRLPG----FILAKQILRQSALTAKKGA----STSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEF   72 (100)
Q Consensus         1 m~~~~~~----~~~~k~~l~r~~~~~~~~~----s~~~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEf   72 (100)
                      |||++++    ++++||+|+||+|.+++.+    ..+.+||+||||||||++ ++||+||++|||||+|++||++|||||
T Consensus         1 m~~~k~~ki~~~~~~kq~l~r~~s~~~~~~~~~~~~~~~vpkG~~aVyVG~~-~~RfvVp~~~L~hP~F~~LL~~aeeEf   79 (104)
T PLN03090          1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQGYDEDGLPLDVPKGHFPVYVGEN-RSRYIVPISFLTHPEFQSLLQQAEEEF   79 (104)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHhcccCCcccccCCCCCCCCcEEEEECCC-CEEEEEEHHHcCCHHHHHHHHHHHHHh
Confidence            8888776    5789999999999987654    367799999999999995 799999999999999999999999999


Q ss_pred             CCccCCCceeeeCcHHHHHHHHHHhh
Q 036909           73 GFNHPMGGLTIPCEENTFIDITSRLE   98 (100)
Q Consensus        73 G~~~~~G~L~IPC~~~~F~~vl~~l~   98 (100)
                      ||+|+ |+|+|||+++.|++++|+|+
T Consensus        80 Gf~~~-G~L~IPC~~~~Fe~ll~~i~  104 (104)
T PLN03090         80 GFDHD-MGLTIPCEEVVFRSLTSMIR  104 (104)
T ss_pred             CCCCC-CcEEEeCCHHHHHHHHHHhC
Confidence            99998 89999999999999999983

>PLN03220 uncharacterized protein; Provisional

Probab=100.00  E-value=4.2e-40  Score=228.93  Aligned_cols=95  Identities=57%  Similarity=0.994  Sum_probs=84.0

Q ss_pred             CCccchhHHHH-HHHHHHhhhhhhcC---CCCcCCCCCCeEEEEEcCC---CceEEEEeccccCcHHHHHHHHhhHHhcC
Q 036909            1 MGIRLPGFILA-KQILRQSALTAKKG---ASTSLDVPKGFLAVYVGET---QRKRFLVPVSYLNQPLFQDLLSRAEEEFG   73 (100)
Q Consensus         1 m~~~~~~~~~~-k~~l~r~~~~~~~~---~s~~~~vpkG~~aVyVG~~---~~~RfvVp~~~L~hP~F~~LL~~aeEEfG   73 (100)
                      ||+++++|... ||+|+||+ .+++.   ++.+.+|||||||||||++   +++|||||++|||||.|++||++||||||
T Consensus         1 ~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~VPkGh~aVyVGe~~~~e~kRFVVPv~yL~hP~F~~LL~~AeEEfG   79 (105)
T PLN03220          1 MGLSRFAISNATKQILKLNS-LANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFG   79 (105)
T ss_pred             CCcchhhhHHHHHHHHHHHh-hcccccccccccCCCCCCeEEEEECCCCCccceEEEEEHHHcCChHHHHHHHHHHHHhC
Confidence            99999999854 99999999 44332   2466799999999999983   47999999999999999999999999999


Q ss_pred             CccCCCceeeeCcHHHHHHHHHH
Q 036909           74 FNHPMGGLTIPCEENTFIDITSR   96 (100)
Q Consensus        74 ~~~~~G~L~IPC~~~~F~~vl~~   96 (100)
                      |+|++|+|+|||+++.|++++..
T Consensus        80 f~~~~G~L~IPCd~~~F~~ll~s  102 (105)
T PLN03220         80 FNHPMGGLTIPCREEVFLDLIAS  102 (105)
T ss_pred             CCCCCCCEEeeCCHHHHHHHHHh
Confidence            99855999999999999999863

>PLN03219 uncharacterized protein; Provisional

Probab=100.00  E-value=1.8e-37  Score=216.68  Aligned_cols=97  Identities=53%  Similarity=0.927  Sum_probs=84.5

Q ss_pred             CCccchhHHHHHHHHHHhhhhhhcCC-------CCcCCCCCCeEEEEEcC-CCceEEEEeccccCcHHHHHHHHhhHHhc
Q 036909            1 MGIRLPGFILAKQILRQSALTAKKGA-------STSLDVPKGFLAVYVGE-TQRKRFLVPVSYLNQPLFQDLLSRAEEEF   72 (100)
Q Consensus         1 m~~~~~~~~~~k~~l~r~~~~~~~~~-------s~~~~vpkG~~aVyVG~-~~~~RfvVp~~~L~hP~F~~LL~~aeEEf   72 (100)
                      ||+.++.+..+||+.+-.+...+..+       +.+.+||+||+|||||+ ++++|||||++|||||+|++||++|||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpkGh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEf   80 (108)
T PLN03219          1 MGLMRSMLPNAKQIFKSQSMRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEEC   80 (108)
T ss_pred             CchHHHHHhhHHHHHHHHHHhcccCCCCCccCCCCCCCCCCCeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHh
Confidence            89999999999999986666544332       24467999999999998 35899999999999999999999999999


Q ss_pred             CCccCCCceeeeCcHHHHHHHHHHh
Q 036909           73 GFNHPMGGLTIPCEENTFIDITSRL   97 (100)
Q Consensus        73 G~~~~~G~L~IPC~~~~F~~vl~~l   97 (100)
                      ||+|++|+|+|||+++.|+++++.-
T Consensus        81 Gf~~~~G~L~IPCd~~~F~~ll~~~  105 (108)
T PLN03219         81 GFHHSMGGLTIPCREESFLHLITSH  105 (108)
T ss_pred             CCCCCCCCEEEeCCHHHHHHHHHhh
Confidence            9998669999999999999999864

>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []

Probab=100.00  E-value=1.2e-36  Score=208.95  Aligned_cols=96  Identities=51%  Similarity=0.826  Sum_probs=76.8

Q ss_pred             CCccchhHHHHHHHHHHhhhhhhcC----CCCcCCCCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCcc
Q 036909            1 MGIRLPGFILAKQILRQSALTAKKG----ASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNH   76 (100)
Q Consensus         1 m~~~~~~~~~~k~~l~r~~~~~~~~----~s~~~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~   76 (100)
                      |..++..+...++...+++......    ++...++|+||||||||++ ++||+||++|||||+|++||++|||||||+|
T Consensus         1 M~~~~k~~~~~~k~~~~~~~~~~~~~~~~~~~~~~vp~G~~~VyVG~~-~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~~   79 (100)
T PF02519_consen    1 MASRLKSLASAKKWQSRARSKSSSSSSSRSSSESDVPKGHFAVYVGEE-RRRFVVPVSYLNHPLFQELLEQAEEEFGFDQ   79 (100)
T ss_pred             CccHHHHHHHHHhhhhhhhhcccccccccccccCCCCCCeEEEEeCcc-ceEEEechHHcCchhHHHHHHHHhhhcCcCC
Confidence            4445555555555544444322211    1234789999999999995 7999999999999999999999999999999


Q ss_pred             CCCceeeeCcHHHHHHHHHHhh
Q 036909           77 PMGGLTIPCEENTFIDITSRLE   98 (100)
Q Consensus        77 ~~G~L~IPC~~~~F~~vl~~l~   98 (100)
                      + |+|+|||+++.|++++|+|+
T Consensus        80 ~-G~l~iPC~~~~Fe~~l~~le  100 (100)
T PF02519_consen   80 D-GPLTIPCDVVLFEHLLWLLE  100 (100)
T ss_pred             C-CcEEeeCCHHHHHHHHHHhC
Confidence            7 99999999999999999985

Proteins from this ARG7 auxin responsive genes family have no identified functional role [].

>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=88.29  E-value=0.63  Score=29.98  Aligned_cols=57  Identities=25%  Similarity=0.241  Sum_probs=41.6

Q ss_pred             EEEcCCCceEEEEeccccC-cH--HHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909           39 VYVGETQRKRFLVPVSYLN-QP--LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER   99 (100)
Q Consensus        39 VyVG~~~~~RfvVp~~~L~-hP--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~   99 (100)
                      +-||.   ++|.++.+.|. +|  .|..++........ ..++|.+-|-++...|++|+..++.
T Consensus         3 lNVGG---~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~-~~~~~~~fiDRdp~~F~~IL~ylr~   62 (94)
T PF02214_consen    3 LNVGG---TIFETSRSTLTRYPDSLLARLFSGERSDDY-DDDDGEYFIDRDPELFEYILNYLRT   62 (94)
T ss_dssp             EEETT---EEEEEEHHHHHTSTTSTTTSHHHTGHGGGE-ETTTTEEEESS-HHHHHHHHHHHHH
T ss_pred             EEECC---EEEEEcHHHHhhCCCChhhhHHhhcccccc-CCccceEEeccChhhhhHHHHHHhh
Confidence            45775   79999999887 54  68888886522211 2234899999999999999998864

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....

>PRK02899 adaptor protein; Provisional

Probab=83.54  E-value=1  Score=34.06  Aligned_cols=24  Identities=33%  Similarity=0.803  Sum_probs=20.7

Q ss_pred             HHHHHHHHhhHHhcCCccCCCceee
Q 036909           59 PLFQDLLSRAEEEFGFNHPMGGLTI   83 (100)
Q Consensus        59 P~F~~LL~~aeEEfG~~~~~G~L~I   83 (100)
                      -+|.++|++|..|+||.-+ |||+|
T Consensus        39 ~lF~~mm~Ea~~e~~F~~~-~pl~~   62 (197)
T PRK02899         39 QLFRDMMQEANKELGFEAD-GPIAV   62 (197)
T ss_pred             HHHHHHHHHhhhccCcccC-CeEEE
Confidence            4588889999999999986 89985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00