Citrus Sinensis ID: 036912
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 445 | ||||||
| 224094939 | 419 | predicted protein [Populus trichocarpa] | 0.932 | 0.990 | 0.655 | 1e-168 | |
| 297740074 | 441 | unnamed protein product [Vitis vinifera] | 0.977 | 0.986 | 0.608 | 1e-161 | |
| 359482319 | 442 | PREDICTED: UPF0481 protein At3g47200-lik | 0.977 | 0.984 | 0.608 | 1e-161 | |
| 224134134 | 419 | predicted protein [Populus trichocarpa] | 0.932 | 0.990 | 0.655 | 1e-161 | |
| 147840479 | 441 | hypothetical protein VITISV_026781 [Viti | 0.977 | 0.986 | 0.601 | 1e-158 | |
| 356503787 | 444 | PREDICTED: UPF0481 protein At3g47200-lik | 0.970 | 0.972 | 0.637 | 1e-157 | |
| 297823459 | 451 | hypothetical protein ARALYDRAFT_902761 [ | 0.943 | 0.931 | 0.602 | 1e-148 | |
| 15227658 | 448 | uncharacterized protein [Arabidopsis tha | 0.943 | 0.937 | 0.597 | 1e-146 | |
| 255582838 | 461 | conserved hypothetical protein [Ricinus | 0.975 | 0.941 | 0.520 | 1e-132 | |
| 224131628 | 458 | predicted protein [Populus trichocarpa] | 0.970 | 0.943 | 0.526 | 1e-132 |
| >gi|224094939|ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|222853202|gb|EEE90749.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/418 (65%), Positives = 349/418 (83%), Gaps = 3/418 (0%)
Query: 28 MNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEE 87
M ++IS+PP LL+ +A SCCIF++PQ FI+INGKSYQPHIVSIGPYHHGEAH+++IEE
Sbjct: 1 MRQKISDPPRLLTKAAANSSCCIFKVPQRFIDINGKSYQPHIVSIGPYHHGEAHLRMIEE 60
Query: 88 HKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLF 147
HKW YLGS+L+R +N L LE L+A++ LE+KAREC+S+ IHL T EFVE++VLDG+F
Sbjct: 61 HKWGYLGSMLSRTQN-NGLDLEVLLRAIQPLEMKARECYSQIIHLDTCEFVEMMVLDGVF 119
Query: 148 IIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEES 207
IIELFRKV +V F+ DDP++TM+WI+PF YRD L+LENQIP+FVLECLF++++ PGEES
Sbjct: 120 IIELFRKVGEIVGFEADDPIVTMAWIIPFFYRDLLRLENQIPFFVLECLFEITRTPGEES 179
Query: 208 GPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHV 267
GP+L+ LAL+FFN A+QRPD ++ ++ N KA+HLLDLVRSS I S+QA+P+ T T +
Sbjct: 180 GPSLSKLALDFFNNALQRPDYIIARHNNGKAKHLLDLVRSSFIDSEQAQPRC-VDTSTPM 238
Query: 268 IHSISKLRRAGIKLN-AVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSG 326
I S+SKLRRAGIKL A+SFLVVKF++G IEMPTITIDD ++SFLLNCVA+EQC SG
Sbjct: 239 IQSVSKLRRAGIKLGQGDPADSFLVVKFKNGVIEMPTITIDDTISSFLLNCVAFEQCHSG 298
Query: 327 CSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCY 386
S H TTYATL+D L+NT +DVEYLCD NIIEN GTD+EVA F+N+LGK+VAFD++ CY
Sbjct: 299 SSNHFTTYATLLDCLINTIKDVEYLCDCNIIENYFGTDSEVARFVNDLGKEVAFDIERCY 358
Query: 387 LSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSA 444
LS++F+DVH YY H+QWA+FK+ YF +PWSFISA+AALI+LLLTVAQT +T+Y
Sbjct: 359 LSEMFSDVHQYYKDRWHLQWASFKFTYFSTPWSFISAMAALIILLLTVAQTFYTIYGT 416
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740074|emb|CBI30256.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482319|ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224134134|ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|222836849|gb|EEE75242.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147840479|emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356503787|ref|XP_003520685.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297823459|ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] gi|297325451|gb|EFH55871.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15227658|ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana] gi|4581143|gb|AAD24627.1| hypothetical protein [Arabidopsis thaliana] gi|18377795|gb|AAL67047.1| unknown protein [Arabidopsis thaliana] gi|21280851|gb|AAM45097.1| unknown protein [Arabidopsis thaliana] gi|330254159|gb|AEC09253.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255582838|ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis] gi|223528124|gb|EEF30195.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224131628|ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 445 | ||||||
| TAIR|locus:2044918 | 448 | AT2G36430 "AT2G36430" [Arabido | 0.943 | 0.937 | 0.579 | 2.5e-136 | |
| TAIR|locus:2171132 | 492 | AT5G22550 "AT5G22550" [Arabido | 0.480 | 0.434 | 0.416 | 2.8e-80 | |
| TAIR|locus:2171127 | 440 | AT5G22540 "AT5G22540" [Arabido | 0.903 | 0.913 | 0.408 | 1.2e-79 | |
| TAIR|locus:2098140 | 504 | AT3G44710 [Arabidopsis thalian | 0.503 | 0.444 | 0.385 | 2.5e-75 | |
| TAIR|locus:2171147 | 517 | AT5G22560 [Arabidopsis thalian | 0.534 | 0.460 | 0.386 | 3.7e-74 | |
| TAIR|locus:2075671 | 476 | AT3G47200 "AT3G47200" [Arabido | 0.910 | 0.850 | 0.381 | 1.6e-72 | |
| TAIR|locus:2075611 | 480 | AT3G47250 [Arabidopsis thalian | 0.532 | 0.493 | 0.396 | 1.2e-71 | |
| TAIR|locus:2075686 | 474 | AT3G47210 [Arabidopsis thalian | 0.844 | 0.793 | 0.368 | 4.5e-66 | |
| TAIR|locus:2083108 | 539 | AT3G50140 [Arabidopsis thalian | 0.469 | 0.387 | 0.361 | 4.9e-66 | |
| TAIR|locus:2074755 | 541 | AT3G50170 "AT3G50170" [Arabido | 0.534 | 0.439 | 0.348 | 3.3e-64 |
| TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 249/430 (57%), Positives = 327/430 (76%)
Query: 22 KDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAH 81
K +E M+K++ EPP LLS++AGK +C IFR+PQS I+ NG+ Y+P +VSIGPYH G+
Sbjct: 19 KIHIERMHKKLKEPPRLLSSAAGKPTCSIFRVPQSMIDCNGRCYEPRVVSIGPYHRGQTQ 78
Query: 82 VKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELL 141
+K+IEEHKWRYL LL R T++L LED++K+V+++E AREC+SETIH+ ++EF E++
Sbjct: 79 LKMIEEHKWRYLNVLLTR---TQNLTLEDYMKSVKNVEEVARECYSETIHMDSEEFNEMM 135
Query: 142 VLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSK 201
VLDG F++ELFRKV+ LV F+P+DP++ M+W+LPF YRDFL LENQIP+FVLE LF+L++
Sbjct: 136 VLDGCFLLELFRKVNNLVPFEPNDPLVAMAWVLPFFYRDFLCLENQIPFFVLETLFNLTR 195
Query: 202 LPGE-ESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAE--PK 258
E E+ +L +LA FFN M R +E + ++K +A+HLLDL+RSS IP + P
Sbjct: 196 GDNENETNASLQSLAFAFFNNMMHRTEEDLARFKELRAKHLLDLLRSSFIPESELHTPPA 255
Query: 259 V---KARTPTHVIHSISKLRRAGIKLNAVK-AESFLVVKFRHGAIEMPTITIDDFMTSFL 314
K + P+H+IHSISKLRRAGIKL +K AESFLVV+FRHG IEMP IT+DDFM+SFL
Sbjct: 256 TNPGKEKMPSHIIHSISKLRRAGIKLRELKDAESFLVVRFRHGTIEMPAITVDDFMSSFL 315
Query: 315 LNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNL 374
NCVAYEQC CS H TTYATL+D L NT +DVEYLCD NIIEN GTD E+A F+N+L
Sbjct: 316 ENCVAYEQCHVACSMHFTTYATLLDCLTNTYKDVEYLCDQNIIENYFGTDTELAKFVNSL 375
Query: 375 GKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISXXXXXXXXXXTV 434
G+DVAFD+ CYL LF +V++YY SS HV+WA FK+ YF+SPWSF+S +V
Sbjct: 376 GRDVAFDITQCYLKDLFEEVNEYYKSSWHVEWATFKFTYFNSPWSFVSALAALVLLVLSV 435
Query: 435 AQTVFTVYSA 444
QT++TV+ A
Sbjct: 436 IQTIYTVFQA 445
|
|
| TAIR|locus:2171132 AT5G22550 "AT5G22550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098140 AT3G44710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171147 AT5G22560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075671 AT3G47200 "AT3G47200" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075611 AT3G47250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075686 AT3G47210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 445 | |||
| pfam03140 | 387 | pfam03140, DUF247, Plant protein of unknown functi | 1e-143 |
| >gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function | Back alignment and domain information |
|---|
Score = 413 bits (1064), Expect = e-143
Identities = 167/394 (42%), Positives = 239/394 (60%), Gaps = 17/394 (4%)
Query: 50 IFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLE 109
I+R+P ++N ++Y+P +VSIGPYHHG+ H++ +EEHKWRYL L+R SL E
Sbjct: 1 IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSL--E 58
Query: 110 DFLKAVESLEIKARECFSE-TIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMI 168
D L AV LE +AR C++E + ++EFVE+L+LDG FI+ELF ++S + +DP+
Sbjct: 59 DLLAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLSE-GIYGENDPLF 117
Query: 169 TMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFF--NYAMQRP 226
W+L + RD L LENQIP+FVLE LF+L ++ +L LAL FF ++ P
Sbjct: 118 ARRWLLSLIRRDLLLLENQIPFFVLEKLFELLT-GRQDVKTSLNDLALRFFYDCESLLPP 176
Query: 227 DEVVEKYKNHKARHLLDLVRSSLIPSD------QAEPKVKARTPTHVIHSISKLRRAGIK 280
D+++E+ HLLDL+R SL+PS A P+ +I S ++LR AG++
Sbjct: 177 DDLIEE---SNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREAGVR 233
Query: 281 L-NAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLID 339
A L V F+ G +E+P + +DD S L N +A+EQC G H+T+Y +D
Sbjct: 234 FKRRKTASCILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYVAFMD 293
Query: 340 YLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYS 399
L+NTA DV L I+EN LG+D EVA F N L + V FD+D YLS +F DV+ Y
Sbjct: 294 NLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVNRYCR 353
Query: 400 SSRHVQWAAFKYKYFDSPWSFISALAALILLLLT 433
S + A + KYF +PW+ IS LAA++LL+LT
Sbjct: 354 SRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387
|
The function of the plant proteins constituting this family is unknown. Length = 387 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 445 | |||
| PF03140 | 391 | DUF247: Plant protein of unknown function; InterPr | 100.0 |
| >PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-110 Score=860.84 Aligned_cols=379 Identities=44% Similarity=0.761 Sum_probs=340.2
Q ss_pred eeecCccccccCCCCCcccEEEeCcccCCCchhchHHHHHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHhccccc
Q 036912 50 IFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSET 129 (445)
Q Consensus 50 I~rVP~~lr~~n~~aY~P~~VSIGPyHhg~~~L~~mE~~K~~~l~~~l~r~~~~~~~~l~~~~~~i~~~e~~aR~~Y~~~ 129 (445)
|||||+++|++|++||+|++|||||||||+++|+.||++|++|++.|++|.+ ..+.++++++++|+++|++||+||+++
T Consensus 1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~-~~~~~l~~~~~~i~~~e~~~R~~Y~~~ 79 (391)
T PF03140_consen 1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSG-APAESLEDYVEAIRSLEEEARACYAED 79 (391)
T ss_pred CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhC-CCcccHHHHHHHHHHHHHHHHHHhccc
Confidence 8999999999999999999999999999999999999999999999999942 123899999999999999999999999
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-cCccccchhHHHhHHhhhccCcchHHHHHHhhccCCCCCCC
Q 036912 130 IH-LGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDP-MITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEES 207 (445)
Q Consensus 130 ~~-~~~~ef~~MlllDGCFILe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQIPffVLe~L~~~~~~~~~~~ 207 (445)
+. +++++|++||++|||||||+|+++.. ..+.+|| ++..+|....|++||+|||||||||||++||++........
T Consensus 80 ~~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~~~~ 157 (391)
T PF03140_consen 80 IDDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSKSDV 157 (391)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccccCc
Confidence 98 99999999999999999999999875 2345788 89999999999999999999999999999999998554467
Q ss_pred chhHHHHHHHHcccccC-CCchhhhhccCCCCCChHHHHHHhcCCCCCCC---CCCCC-----CCCcccccCHHHHHHhC
Q 036912 208 GPTLATLALEFFNYAMQ-RPDEVVEKYKNHKARHLLDLVRSSLIPSDQAE---PKVKA-----RTPTHVIHSISKLRRAG 278 (445)
Q Consensus 208 ~~~l~~l~~~~f~~~~~-~~~~~~~~~~~~~~~HLLdL~~~~~~p~~~~~---~~~~~-----~~~~~~~~sAteL~~aG 278 (445)
..++.+++.+||..... .... ......+++|||||+|++++|++... +..+. ..+...|||||||++||
T Consensus 158 ~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~~aG 235 (391)
T PF03140_consen 158 DESLIDLVLKFFYKHWPSWPPD--EPISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELREAG 235 (391)
T ss_pred cchHHHHHHhHhcccccccccc--ccccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHHhCC
Confidence 89999999999942111 1111 12455679999999999999932211 11111 11226899999999999
Q ss_pred cEEeecCCC-ceeeeEEeccEEEeccEEecCcchhhhhhHHHHhhhcCCCCcchhhHHHHHHHhhCChhhHHHHhhCCcc
Q 036912 279 IKLNAVKAE-SFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNII 357 (445)
Q Consensus 279 V~Fk~~~~~-~llDI~F~~G~L~IP~L~id~~T~~llrNLiA~Eq~~~~~~~~vTsYv~fM~~Li~t~~DV~lL~~~GIi 357 (445)
|+||++++. +++||+|++|+|+||+|.||++|+++||||||||||++..+.+|||||.||++||+|++||++|+++|||
T Consensus 236 V~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~~kgIi 315 (391)
T PF03140_consen 236 VKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLRRKGII 315 (391)
T ss_pred cEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHHhCCeE
Confidence 999999876 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHHhccCcccCCCcccHHHHHHHHHHHhcCchHHHHHHhccccccchHHHHHHHHHHHHHHHH
Q 036912 358 ENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLT 433 (445)
Q Consensus 358 ~~~lgsdeeva~lF~~L~~~~~~~~~~~y~~~v~~~l~~y~~~rw~~w~a~l~~~yf~nPW~~~s~~aA~ill~lT 433 (445)
+|++|+||||++|||+||+++.++.+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|+||
T Consensus 316 ~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~lT 391 (391)
T PF03140_consen 316 VNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLLT 391 (391)
T ss_pred ecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999987789999999999999999999999999999999999999999999999997
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 445 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 1e-08
Identities = 56/365 (15%), Positives = 107/365 (29%), Gaps = 126/365 (34%)
Query: 76 HHGEAHVKI-IEEHKWRYLGSLLNRLKNTKSLGLEDFLKA-VESLEIKARECFSETIHLG 133
HH H+ EH+++Y K + L F A V++ + K + ++I L
Sbjct: 1 HHHHHHMDFETGEHQYQY-----------KDI-LSVFEDAFVDNFDCKDVQDMPKSI-LS 47
Query: 134 TDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVL 193
+E +++ D + + W L K E + FV
Sbjct: 48 KEEIDHIIMSK-----------------DAVSGTLRLFWTL------LSKQEEMVQKFVE 84
Query: 194 ECL-----FDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSS 248
E L F +S + E+ P++ T + ++V KY ++ R
Sbjct: 85 EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY---------NVSR-- 133
Query: 249 LIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDD 308
+ KLR+A L ++ +++ G +
Sbjct: 134 -------------------LQPYLKLRQA---LLELRPAKNVLI---DG---VL------ 159
Query: 309 FMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLC--DGNIIENNLGTDAE 366
G K T A ++ + C D I NL
Sbjct: 160 -----------------GSGK--TWVA------LDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 367 VALFINNLGKDVAFDMDLCY-LSKLFNDVHDYYSSSRH-VQWAAFKYKYFDSPWSFISAL 424
+ L L Y + + D+ S+ + + + + + + L
Sbjct: 195 PETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 425 AALIL 429
L+L
Sbjct: 248 --LVL 250
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00