Citrus Sinensis ID: 036912


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-----
MGSTSVEAEANDHVISIWEVKKDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
ccccccccccccEEEEHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHccEEEEcccccccEEEEcccEEEEccEEEcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccccccccccccEEEEEEcccHHHHHHHHHHHcccccHccccccccccEEEEccHHHHHccHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccccccccHHHHHHcccEEEEcccccEEEEEEcccEEEccEEEEcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHcccEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
mgstsveaeandHVISIWEVKKDRLESMNkrisepptllsnsagkqsccifrlpqsfiningksyqphivsigpyhhgEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVsglvkfdpddpmitmswilpFLYRDFLKLENQIPYFVLECLFdlsklpgeesgptLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRsslipsdqaepkvkartpthvIHSISKLRRAGIKLNAVKAESFLVVKFrhgaiemptitidDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEylcdgniiennlgtdAEVALFINNLgkdvafdmDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
mgstsveaeandhvisiWEVKKDRLESMNKRisepptllsnsagKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLvrsslipsdqaepkvkartpthvihsiSKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
MGSTSVEAEANDHVISIWEVKKDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISalaalillllTVAQTVFTVYSAV
*************VISIWEV*************************QSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRS*****************THVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVY***
***********************************************CCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
*********ANDHVISIWEVKKDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPS************THVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
**********NDHVISIWEVKKDRLESMNKRISEPPT**SN*AGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSD**********PTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHii
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MGSTSVEAEANDHVISIWEVKKDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query445 2.2.26 [Sep-21-2011]
Q9SD53476 UPF0481 protein At3g47200 no no 0.907 0.848 0.387 2e-79
P0C897529 Putative UPF0481 protein no no 0.426 0.359 0.263 5e-13
>sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1 Back     alignment and function desciption
 Score =  296 bits (758), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/434 (38%), Positives = 261/434 (60%), Gaps = 30/434 (6%)

Query: 33  SEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRY 92
           S+ P LL  SAGK+SCCIFR+P+SF+ +N K+Y+P +VSIGPYH+GE H+++I++HK R 
Sbjct: 31  SKEPVLLLESAGKESCCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRL 90

Query: 93  LGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLFIIELF 152
           L   L+  K  K +     +KAV  LE K R+ +SE +  G D  + ++VLDG FI+ +F
Sbjct: 91  LQLFLDEAKK-KDVEENVLVKAVVDLEDKIRKSYSEELKTGHD-LMFMMVLDGCFILMVF 148

Query: 153 RKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLA 212
             +SG ++   +DP+ ++ W+L  +  D L LENQ+P+FVL+ L+  SK+ G  S   L 
Sbjct: 149 LIMSGNIELS-EDPIFSIPWLLSSIQSDLLLLENQVPFFVLQTLYVGSKI-GVSS--DLN 204

Query: 213 TLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIP----SDQAE------------ 256
            +A  FF   + +     EK++N+KA+HLLDL+R + +P    SD+A             
Sbjct: 205 RIAFHFFKNPIDKEGSYWEKHRNYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGK 264

Query: 257 ----PKVKARTPTHVIHSISKLRRAGIK--LNAVKAESFLVVKFRHGAIEMPTITIDDFM 310
               P V ++    +I S  +LR  GIK  L   K +S L V+ +   +++P +  D F+
Sbjct: 265 SGNVPSVDSKA-VPLILSAKRLRLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFI 323

Query: 311 TSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYL-CDGNIIENNLGTDAEVAL 369
           +SF LNCVA+EQ  +  S  ITTY   +  L+N   DV +L  D  IIEN+ G++ EV+ 
Sbjct: 324 SSFFLNCVAFEQFYTDSSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSE 383

Query: 370 FINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALIL 429
           F   + KDV F++D  YL+ +F  V++Y     +  WA F++ +F+SPW+F+S+ A L +
Sbjct: 384 FFKTISKDVVFEVDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFV 443

Query: 430 LLLTVAQTVFTVYS 443
           +LLT+ Q+   + S
Sbjct: 444 ILLTMLQSTVAILS 457





Arabidopsis thaliana (taxid: 3702)
>sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
224094939419 predicted protein [Populus trichocarpa] 0.932 0.990 0.655 1e-168
297740074441 unnamed protein product [Vitis vinifera] 0.977 0.986 0.608 1e-161
359482319442 PREDICTED: UPF0481 protein At3g47200-lik 0.977 0.984 0.608 1e-161
224134134419 predicted protein [Populus trichocarpa] 0.932 0.990 0.655 1e-161
147840479441 hypothetical protein VITISV_026781 [Viti 0.977 0.986 0.601 1e-158
356503787444 PREDICTED: UPF0481 protein At3g47200-lik 0.970 0.972 0.637 1e-157
297823459451 hypothetical protein ARALYDRAFT_902761 [ 0.943 0.931 0.602 1e-148
15227658448 uncharacterized protein [Arabidopsis tha 0.943 0.937 0.597 1e-146
255582838461 conserved hypothetical protein [Ricinus 0.975 0.941 0.520 1e-132
224131628458 predicted protein [Populus trichocarpa] 0.970 0.943 0.526 1e-132
>gi|224094939|ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|222853202|gb|EEE90749.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 274/418 (65%), Positives = 349/418 (83%), Gaps = 3/418 (0%)

Query: 28  MNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEE 87
           M ++IS+PP LL+ +A   SCCIF++PQ FI+INGKSYQPHIVSIGPYHHGEAH+++IEE
Sbjct: 1   MRQKISDPPRLLTKAAANSSCCIFKVPQRFIDINGKSYQPHIVSIGPYHHGEAHLRMIEE 60

Query: 88  HKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELLVLDGLF 147
           HKW YLGS+L+R +N   L LE  L+A++ LE+KAREC+S+ IHL T EFVE++VLDG+F
Sbjct: 61  HKWGYLGSMLSRTQN-NGLDLEVLLRAIQPLEMKARECYSQIIHLDTCEFVEMMVLDGVF 119

Query: 148 IIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEES 207
           IIELFRKV  +V F+ DDP++TM+WI+PF YRD L+LENQIP+FVLECLF++++ PGEES
Sbjct: 120 IIELFRKVGEIVGFEADDPIVTMAWIIPFFYRDLLRLENQIPFFVLECLFEITRTPGEES 179

Query: 208 GPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAEPKVKARTPTHV 267
           GP+L+ LAL+FFN A+QRPD ++ ++ N KA+HLLDLVRSS I S+QA+P+    T T +
Sbjct: 180 GPSLSKLALDFFNNALQRPDYIIARHNNGKAKHLLDLVRSSFIDSEQAQPRC-VDTSTPM 238

Query: 268 IHSISKLRRAGIKLN-AVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSG 326
           I S+SKLRRAGIKL     A+SFLVVKF++G IEMPTITIDD ++SFLLNCVA+EQC SG
Sbjct: 239 IQSVSKLRRAGIKLGQGDPADSFLVVKFKNGVIEMPTITIDDTISSFLLNCVAFEQCHSG 298

Query: 327 CSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCY 386
            S H TTYATL+D L+NT +DVEYLCD NIIEN  GTD+EVA F+N+LGK+VAFD++ CY
Sbjct: 299 SSNHFTTYATLLDCLINTIKDVEYLCDCNIIENYFGTDSEVARFVNDLGKEVAFDIERCY 358

Query: 387 LSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLTVAQTVFTVYSA 444
           LS++F+DVH YY    H+QWA+FK+ YF +PWSFISA+AALI+LLLTVAQT +T+Y  
Sbjct: 359 LSEMFSDVHQYYKDRWHLQWASFKFTYFSTPWSFISAMAALIILLLTVAQTFYTIYGT 416




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740074|emb|CBI30256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482319|ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224134134|ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|222836849|gb|EEE75242.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147840479|emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356503787|ref|XP_003520685.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max] Back     alignment and taxonomy information
>gi|297823459|ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] gi|297325451|gb|EFH55871.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15227658|ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana] gi|4581143|gb|AAD24627.1| hypothetical protein [Arabidopsis thaliana] gi|18377795|gb|AAL67047.1| unknown protein [Arabidopsis thaliana] gi|21280851|gb|AAM45097.1| unknown protein [Arabidopsis thaliana] gi|330254159|gb|AEC09253.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255582838|ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis] gi|223528124|gb|EEF30195.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224131628|ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
TAIR|locus:2044918448 AT2G36430 "AT2G36430" [Arabido 0.943 0.937 0.579 2.5e-136
TAIR|locus:2171132492 AT5G22550 "AT5G22550" [Arabido 0.480 0.434 0.416 2.8e-80
TAIR|locus:2171127440 AT5G22540 "AT5G22540" [Arabido 0.903 0.913 0.408 1.2e-79
TAIR|locus:2098140504 AT3G44710 [Arabidopsis thalian 0.503 0.444 0.385 2.5e-75
TAIR|locus:2171147517 AT5G22560 [Arabidopsis thalian 0.534 0.460 0.386 3.7e-74
TAIR|locus:2075671476 AT3G47200 "AT3G47200" [Arabido 0.910 0.850 0.381 1.6e-72
TAIR|locus:2075611480 AT3G47250 [Arabidopsis thalian 0.532 0.493 0.396 1.2e-71
TAIR|locus:2075686474 AT3G47210 [Arabidopsis thalian 0.844 0.793 0.368 4.5e-66
TAIR|locus:2083108539 AT3G50140 [Arabidopsis thalian 0.469 0.387 0.361 4.9e-66
TAIR|locus:2074755541 AT3G50170 "AT3G50170" [Arabido 0.534 0.439 0.348 3.3e-64
TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
 Identities = 249/430 (57%), Positives = 327/430 (76%)

Query:    22 KDRLESMNKRISEPPTLLSNSAGKQSCCIFRLPQSFININGKSYQPHIVSIGPYHHGEAH 81
             K  +E M+K++ EPP LLS++AGK +C IFR+PQS I+ NG+ Y+P +VSIGPYH G+  
Sbjct:    19 KIHIERMHKKLKEPPRLLSSAAGKPTCSIFRVPQSMIDCNGRCYEPRVVSIGPYHRGQTQ 78

Query:    82 VKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSETIHLGTDEFVELL 141
             +K+IEEHKWRYL  LL R   T++L LED++K+V+++E  AREC+SETIH+ ++EF E++
Sbjct:    79 LKMIEEHKWRYLNVLLTR---TQNLTLEDYMKSVKNVEEVARECYSETIHMDSEEFNEMM 135

Query:   142 VLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVLECLFDLSK 201
             VLDG F++ELFRKV+ LV F+P+DP++ M+W+LPF YRDFL LENQIP+FVLE LF+L++
Sbjct:   136 VLDGCFLLELFRKVNNLVPFEPNDPLVAMAWVLPFFYRDFLCLENQIPFFVLETLFNLTR 195

Query:   202 LPGE-ESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSSLIPSDQAE--PK 258
                E E+  +L +LA  FFN  M R +E + ++K  +A+HLLDL+RSS IP  +    P 
Sbjct:   196 GDNENETNASLQSLAFAFFNNMMHRTEEDLARFKELRAKHLLDLLRSSFIPESELHTPPA 255

Query:   259 V---KARTPTHVIHSISKLRRAGIKLNAVK-AESFLVVKFRHGAIEMPTITIDDFMTSFL 314
                 K + P+H+IHSISKLRRAGIKL  +K AESFLVV+FRHG IEMP IT+DDFM+SFL
Sbjct:   256 TNPGKEKMPSHIIHSISKLRRAGIKLRELKDAESFLVVRFRHGTIEMPAITVDDFMSSFL 315

Query:   315 LNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNIIENNLGTDAEVALFINNL 374
              NCVAYEQC   CS H TTYATL+D L NT +DVEYLCD NIIEN  GTD E+A F+N+L
Sbjct:   316 ENCVAYEQCHVACSMHFTTYATLLDCLTNTYKDVEYLCDQNIIENYFGTDTELAKFVNSL 375

Query:   375 GKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISXXXXXXXXXXTV 434
             G+DVAFD+  CYL  LF +V++YY SS HV+WA FK+ YF+SPWSF+S          +V
Sbjct:   376 GRDVAFDITQCYLKDLFEEVNEYYKSSWHVEWATFKFTYFNSPWSFVSALAALVLLVLSV 435

Query:   435 AQTVFTVYSA 444
              QT++TV+ A
Sbjct:   436 IQTIYTVFQA 445




GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009741 "response to brassinosteroid stimulus" evidence=RCA
TAIR|locus:2171132 AT5G22550 "AT5G22550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098140 AT3G44710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171147 AT5G22560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075671 AT3G47200 "AT3G47200" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075611 AT3G47250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075686 AT3G47210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
pfam03140387 pfam03140, DUF247, Plant protein of unknown functi 1e-143
>gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function Back     alignment and domain information
 Score =  413 bits (1064), Expect = e-143
 Identities = 167/394 (42%), Positives = 239/394 (60%), Gaps = 17/394 (4%)

Query: 50  IFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLE 109
           I+R+P    ++N ++Y+P +VSIGPYHHG+ H++ +EEHKWRYL   L+R     SL  E
Sbjct: 1   IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSL--E 58

Query: 110 DFLKAVESLEIKARECFSE-TIHLGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMI 168
           D L AV  LE +AR C++E    + ++EFVE+L+LDG FI+ELF ++S    +  +DP+ 
Sbjct: 59  DLLAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLSE-GIYGENDPLF 117

Query: 169 TMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEESGPTLATLALEFF--NYAMQRP 226
              W+L  + RD L LENQIP+FVLE LF+L     ++   +L  LAL FF    ++  P
Sbjct: 118 ARRWLLSLIRRDLLLLENQIPFFVLEKLFELLT-GRQDVKTSLNDLALRFFYDCESLLPP 176

Query: 227 DEVVEKYKNHKARHLLDLVRSSLIPSD------QAEPKVKARTPTHVIHSISKLRRAGIK 280
           D+++E+       HLLDL+R SL+PS        A P+        +I S ++LR AG++
Sbjct: 177 DDLIEE---SNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREAGVR 233

Query: 281 L-NAVKAESFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLID 339
                 A   L V F+ G +E+P + +DD   S L N +A+EQC  G   H+T+Y   +D
Sbjct: 234 FKRRKTASCILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYVAFMD 293

Query: 340 YLVNTARDVEYLCDGNIIENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYS 399
            L+NTA DV  L    I+EN LG+D EVA F N L + V FD+D  YLS +F DV+ Y  
Sbjct: 294 NLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVNRYCR 353

Query: 400 SSRHVQWAAFKYKYFDSPWSFISALAALILLLLT 433
           S  +   A  + KYF +PW+ IS LAA++LL+LT
Sbjct: 354 SRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387


The function of the plant proteins constituting this family is unknown. Length = 387

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 445
PF03140391 DUF247: Plant protein of unknown function; InterPr 100.0
>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown Back     alignment and domain information
Probab=100.00  E-value=4.3e-110  Score=860.84  Aligned_cols=379  Identities=44%  Similarity=0.761  Sum_probs=340.2

Q ss_pred             eeecCccccccCCCCCcccEEEeCcccCCCchhchHHHHHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHhccccc
Q 036912           50 IFRLPQSFININGKSYQPHIVSIGPYHHGEAHVKIIEEHKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIKARECFSET  129 (445)
Q Consensus        50 I~rVP~~lr~~n~~aY~P~~VSIGPyHhg~~~L~~mE~~K~~~l~~~l~r~~~~~~~~l~~~~~~i~~~e~~aR~~Y~~~  129 (445)
                      |||||+++|++|++||+|++|||||||||+++|+.||++|++|++.|++|.+ ..+.++++++++|+++|++||+||+++
T Consensus         1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~-~~~~~l~~~~~~i~~~e~~~R~~Y~~~   79 (391)
T PF03140_consen    1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSG-APAESLEDYVEAIRSLEEEARACYAED   79 (391)
T ss_pred             CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhC-CCcccHHHHHHHHHHHHHHHHHHhccc
Confidence            8999999999999999999999999999999999999999999999999942 123899999999999999999999999


Q ss_pred             CC-CChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-cCccccchhHHHhHHhhhccCcchHHHHHHhhccCCCCCCC
Q 036912          130 IH-LGTDEFVELLVLDGLFIIELFRKVSGLVKFDPDDP-MITMSWILPFLYRDFLKLENQIPYFVLECLFDLSKLPGEES  207 (445)
Q Consensus       130 ~~-~~~~ef~~MlllDGCFILe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQIPffVLe~L~~~~~~~~~~~  207 (445)
                      +. +++++|++||++|||||||+|+++..  ..+.+|| ++..+|....|++||+|||||||||||++||++........
T Consensus        80 ~~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~~~~  157 (391)
T PF03140_consen   80 IDDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSKSDV  157 (391)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccccCc
Confidence            98 99999999999999999999999875  2345788 89999999999999999999999999999999998554467


Q ss_pred             chhHHHHHHHHcccccC-CCchhhhhccCCCCCChHHHHHHhcCCCCCCC---CCCCC-----CCCcccccCHHHHHHhC
Q 036912          208 GPTLATLALEFFNYAMQ-RPDEVVEKYKNHKARHLLDLVRSSLIPSDQAE---PKVKA-----RTPTHVIHSISKLRRAG  278 (445)
Q Consensus       208 ~~~l~~l~~~~f~~~~~-~~~~~~~~~~~~~~~HLLdL~~~~~~p~~~~~---~~~~~-----~~~~~~~~sAteL~~aG  278 (445)
                      ..++.+++.+||..... ....  ......+++|||||+|++++|++...   +..+.     ..+...|||||||++||
T Consensus       158 ~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~~aG  235 (391)
T PF03140_consen  158 DESLIDLVLKFFYKHWPSWPPD--EPISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELREAG  235 (391)
T ss_pred             cchHHHHHHhHhcccccccccc--ccccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHHhCC
Confidence            89999999999942111 1111  12455679999999999999932211   11111     11226899999999999


Q ss_pred             cEEeecCCC-ceeeeEEeccEEEeccEEecCcchhhhhhHHHHhhhcCCCCcchhhHHHHHHHhhCChhhHHHHhhCCcc
Q 036912          279 IKLNAVKAE-SFLVVKFRHGAIEMPTITIDDFMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLCDGNII  357 (445)
Q Consensus       279 V~Fk~~~~~-~llDI~F~~G~L~IP~L~id~~T~~llrNLiA~Eq~~~~~~~~vTsYv~fM~~Li~t~~DV~lL~~~GIi  357 (445)
                      |+||++++. +++||+|++|+|+||+|.||++|+++||||||||||++..+.+|||||.||++||+|++||++|+++|||
T Consensus       236 V~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~~kgIi  315 (391)
T PF03140_consen  236 VKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLRRKGII  315 (391)
T ss_pred             cEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHHhCCeE
Confidence            999999876 5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHHHHhccCcccCCCcccHHHHHHHHHHHhcCchHHHHHHhccccccchHHHHHHHHHHHHHHHH
Q 036912          358 ENNLGTDAEVALFINNLGKDVAFDMDLCYLSKLFNDVHDYYSSSRHVQWAAFKYKYFDSPWSFISALAALILLLLT  433 (445)
Q Consensus       358 ~~~lgsdeeva~lF~~L~~~~~~~~~~~y~~~v~~~l~~y~~~rw~~w~a~l~~~yf~nPW~~~s~~aA~ill~lT  433 (445)
                      +|++|+||||++|||+||+++.++.+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|+||
T Consensus       316 ~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~lT  391 (391)
T PF03140_consen  316 VNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLLT  391 (391)
T ss_pred             ecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999987789999999999999999999999999999999999999999999999997




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 56/365 (15%), Positives = 107/365 (29%), Gaps = 126/365 (34%)

Query: 76  HHGEAHVKI-IEEHKWRYLGSLLNRLKNTKSLGLEDFLKA-VESLEIKARECFSETIHLG 133
           HH   H+     EH+++Y           K + L  F  A V++ + K  +   ++I L 
Sbjct: 1   HHHHHHMDFETGEHQYQY-----------KDI-LSVFEDAFVDNFDCKDVQDMPKSI-LS 47

Query: 134 TDEFVELLVLDGLFIIELFRKVSGLVKFDPDDPMITMSWILPFLYRDFLKLENQIPYFVL 193
            +E   +++                   D     + + W L        K E  +  FV 
Sbjct: 48  KEEIDHIIMSK-----------------DAVSGTLRLFWTL------LSKQEEMVQKFVE 84

Query: 194 ECL-----FDLSKLPGEESGPTLATLALEFFNYAMQRPDEVVEKYKNHKARHLLDLVRSS 248
           E L     F +S +  E+  P++ T         +   ++V  KY         ++ R  
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY---------NVSR-- 133

Query: 249 LIPSDQAEPKVKARTPTHVIHSISKLRRAGIKLNAVKAESFLVVKFRHGAIEMPTITIDD 308
                              +    KLR+A   L  ++    +++    G   +       
Sbjct: 134 -------------------LQPYLKLRQA---LLELRPAKNVLI---DG---VL------ 159

Query: 309 FMTSFLLNCVAYEQCQSGCSKHITTYATLIDYLVNTARDVEYLC--DGNIIENNLGTDAE 366
                            G  K  T  A      ++     +  C  D  I   NL     
Sbjct: 160 -----------------GSGK--TWVA------LDVCLSYKVQCKMDFKIFWLNLKNCNS 194

Query: 367 VALFINNLGKDVAFDMDLCY-LSKLFNDVHDYYSSSRH-VQWAAFKYKYFDSPWSFISAL 424
               +  L         L Y +   +    D+ S+ +  +     + +       + + L
Sbjct: 195 PETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 425 AALIL 429
             L+L
Sbjct: 248 --LVL 250


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00