Citrus Sinensis ID: 037248

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MGLPHKESTFSDEDGFEDEDLSDLNEEEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVEREKGRRIETLEIPSLALEGRKV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHcccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccc
Coil and Loop (DISEMBL)
mglphkestfsdedgfededlsdlneeedvklaepskqavynrdgleeklqdigwpenagwihKLTIDidqeqevdvnddlKREASFYTQALEGTRQAFEKLQsmglpflrpaDYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVERekgrrietleipslalegrkv
Flexible Loop (DISEMBL)
mglphkestfsdedgfedEDLSDLneeedvklaepskqavynrDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKeiqeiglvgrqekvVVVMverekgrrietleipslalegrkv
Low Complexity Region (SEG)
MGLPHKESTFSDEDGFededlsdlneeedVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQkeieeaeerkkareakklakeiQEIGLvgrqekvvvvmverekgrrIETLEIPSLALEGRKV
Disordered region (IsUnstruct)
*********************************************LEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLL************************IQEIGLVGRQEKVVVVMVERE********************
Disordered Region (DISOPRED)
*************************************QAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKV***************************************************************AL*****
Disordered Region (DISEMBL)
************************************KQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKE***************LAKEIQEIGLVGRQEKVVVVMVEREKGRRIETLEIPSLALEGRKV
Disordered Region (DISPRO)
****************************DVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVEREKGRRIETLEIPSLALE****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGLPHKESTFSDEDGFEDEDLSDLNEEEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxEIGLVGRQEKVVVVMVEREKGRRIETLEIPSLALEGRKV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
Q9LUJ5	293	Probable rRNA-processing	yes	no	0.723	0.491	0.671	7e-52
O13802	333	Probable rRNA-processing	yes	no	0.763	0.456	0.367	5e-17
P36049	427	rRNA-processing protein E	yes	no	0.758	0.353	0.335	7e-17
Q09958	340	Probable rRNA-processing	yes	no	0.648	0.379	0.367	5e-15
Q99848	306	Probable rRNA-processing	yes	no	0.708	0.460	0.331	1e-12
Q9D903	306	Probable rRNA-processing	yes	no	0.723	0.470	0.306	1e-12
Q9I8J6	312	Probable rRNA-processing	N/A	no	0.698	0.445	0.307	2e-11
Q9V9Z9	307	Probable rRNA-processing	yes	no	0.447	0.289	0.378	2e-10

>sp|Q9LUJ5|EBP2_ARATH Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1

 Score =  203 bits (516), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 98/146 (67%), Positives = 119/146 (81%), Gaps = 2/146 (1%)

Query: 17  EDEDLSDLNEEEDV--KLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQE 74
           E E LSD + E ++  KLAEP+K A+YNRDGL +KLQDI WPE+  W HKLT++IDQ   
Sbjct: 25  EAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGA 84

Query: 75  VDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLL 134
           VDVNDDL RE +FYTQALEGTR+AF KL  MG+ FLRPA+YYAEMVKSD HMEKVK  LL
Sbjct: 85  VDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLL 144

Query: 135 SEQKEIEEAEERKKAREAKKLAKEIQ 160
            E+K+IEE+EER+KAR+ K++AKE+Q
Sbjct: 145 HEKKQIEESEERRKARDNKRMAKEVQ 170

Required for the processing of the 27S pre-rRNA.
Arabidopsis thaliana (taxid: 3702)

>sp|O13802|EBP2_SCHPO Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ebp2 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 3/155 (1%)

Query: 7   ESTFSDEDGFEDEDLSDLNEEEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLT 66
           ES  SDE   E  DL  +  EED  L    K A+ N   LE   + I +P++  ++    
Sbjct: 63  ESEGSDE--VELSDLEGIELEEDADLIRKRKLAINNTVALENIYERIKYPDDISFVENQA 120

Query: 67  IDIDQEQEV-DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAH 125
           +   +   + +V DDL RE +FY Q +   + AF KL+   +   RP DY+AEM+KSD H
Sbjct: 121 VTTKEPIIIENVEDDLARELAFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDH 180

Query: 126 MEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           MEKV+  L+ E    + +++ KK RE KK  K++Q
Sbjct: 181 MEKVRQELIKEATAKKLSQQAKKQRELKKFGKQVQ 215

Required for the processing of the 27S pre-rRNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P36049|EBP2_YEAST rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EBP2 PE=1 SV=1

 Score = 87.0 bits (214), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 90/155 (58%), Gaps = 4/155 (2%)

Query: 18  DEDLSDLNEEEDVKLAEPSKQAVYNRDGLEEKLQDIG--WPENAGWIHK-LTIDIDQEQE 74
           D  LSD+  + D  +    K  V N   ++  L+ +   W +++   H+ +T + + ++ 
Sbjct: 173 DVPLSDVEFDSDADVVPHHKLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEH 232

Query: 75  V-DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLL 133
           + D+ DD +RE +FY Q+L+    A ++L+ + +PF RP DY+AEMVKSD HM+K+K  L
Sbjct: 233 IKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKL 292

Query: 134 LSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQ 168
           + E  + +  EE ++ R+ KK  K++Q   L  RQ
Sbjct: 293 IEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQ 327

Required for the processing of the 27S pre-rRNA. Probably involved in the step of the processing of the 27 SA precursor into the 27 SB intermediate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q09958|EBP2_CAEEL Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans GN=C18A3.3 PE=1 SV=2

 Score = 80.9 bits (198), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 7/136 (5%)

Query: 37  KQAVYNRDG-LEEKLQDIGWPENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQAL 92
           K+ + N+   ++EKL +I   ++  W+  L + +    E+D    NDD +RE +FY QA 
Sbjct: 82  KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAE 138

Query: 93  EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREA 152
           +  + A+ +L ++G+  LRP DYYAEM KSD HM+KV+  LL  Q+  E  E  ++ RE 
Sbjct: 139 KAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREE 198

Query: 153 KKLAKEIQEIGLVGRQ 168
           KK A ++Q+  L  + 
Sbjct: 199 KKFAVKVQKEVLAAKN 214

Required for the processing of the 27S pre-rRNA.

Caenorhabditis elegans (taxid: 6239)

>sp|Q99848|EBP2_HUMAN Probable rRNA-processing protein EBP2 OS=Homo sapiens GN=EBNA1BP2 PE=1 SV=2

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 16/157 (10%)

Query: 34  EPSKQAVYNRDGLEEKL----QDIGW-----------PENAGWIHKLTIDIDQEQEVDVN 78
           E  K+AV + +GL++ L    +D+ W           PE  G       + DQ+  VD  
Sbjct: 41  EGPKKAVNDVNGLKQCLAEFKRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQK-AVDPE 99

Query: 79  DDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQK 138
           DD +RE SFY QA         +L  + +P  RP DY+AEM KSD  M+K++  L ++Q 
Sbjct: 100 DDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQA 159

Query: 139 EIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVM 175
            +E +E+ K+ R  +K  K++Q   L  RQ++   +M
Sbjct: 160 AMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMM 196

Required for the processing of the 27S pre-rRNA.

Homo sapiens (taxid: 9606)

>sp|Q9D903|EBP2_MOUSE Probable rRNA-processing protein EBP2 OS=Mus musculus GN=Ebna1bp2 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 19/163 (11%)

Query: 29  DVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDI----------------DQE 72
           +V L +P K+AV +  GL++ L +  +  +  W+ +L + +                DQ+
Sbjct: 37  NVVLEKP-KKAVNDVSGLKQCLAE--FRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQK 93

Query: 73  QEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCL 132
           + V+  DD +RE SFY QA         +L  + +P  RP DY+AEM KSD  M+K++  
Sbjct: 94  KGVNPEDDFQREMSFYRQAQAAVLAVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQK 153

Query: 133 LLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVM 175
           L ++Q  +E++E+ K+ R  +K  K++Q   L  RQ +   +M
Sbjct: 154 LQTKQAAMEKSEKAKQLRALRKYGKKVQTEVLQKRQREKAHMM 196

Required for the processing of the 27S pre-rRNA.

Mus musculus (taxid: 10090)

>sp|Q9I8J6|EBP2_XENLA Probable rRNA-processing protein EBP2 OS=Xenopus laevis GN=ebna1bp2 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 17/156 (10%)

Query: 34  EPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDID-------QEQEVDVN-------D 79
           E  K+   +  GL++ L+D+       W+ +L + +D       Q  + D N       D
Sbjct: 44  EGKKKPFNDASGLKQSLKDLK--NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAED 101

Query: 80  DLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKE 139
           D +RE  FY QA      +  +L+ + +   RP DY+AEM K+D HM+K++  L  +Q  
Sbjct: 102 DFQREMCFYRQAQAAVLYSLPRLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQAS 161

Query: 140 IEEAEERKKAREAKKLAKEIQEIGLVGRQ-EKVVVV 174
           +E++E+ K+ R  +K  K++Q   L  RQ EK  +V
Sbjct: 162 MEKSEKAKQLRALRKYGKKVQVEVLQKRQKEKSAMV 197

Required for the processing of the 27S pre-rRNA.

Xenopus laevis (taxid: 8355)

>sp|Q9V9Z9|EBP2_DROME Probable rRNA-processing protein EBP2 homolog OS=Drosophila melanogaster GN=CG1542 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 6/95 (6%)

Query: 77  VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSE 136
           V +D KRE  F+ QA     +A  +L  +G+   RP DY+AEM KSD HM+KV+  L+++
Sbjct: 114 VLNDFKREMLFHRQAQSAVLEAIPRLHELGIKTRRPDDYFAEMAKSDEHMQKVRANLMAK 173

Query: 137 QKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKV 171
           Q+   ++E  K+ RE +K+ K      ++ +Q KV
Sbjct: 174 QQGQAKSERIKQIREQRKMGK------MLAKQTKV 202

Required for the processing of the 27S pre-rRNA.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
255570978	307	rRNA-processing protein EBP2, putative [	0.804	0.521	0.653	7e-56
224134537	300	predicted protein [Populus trichocarpa]	0.773	0.513	0.664	1e-55
356576777	287	PREDICTED: probable rRNA-processing prot	0.663	0.459	0.787	3e-55
359806727	287	uncharacterized protein LOC100805013 [Gl	0.678	0.470	0.755	1e-54
357517997	469	hypothetical protein MTR_8g075400 [Medic	0.663	0.281	0.787	1e-54
357484899	279	hypothetical protein MTR_5g028350 [Medic	0.683	0.487	0.764	2e-54
225455559	302	PREDICTED: probable rRNA-processing prot	0.763	0.503	0.674	3e-53
449488602	311	PREDICTED: probable rRNA-processing prot	0.804	0.514	0.607	5e-51
449451821	312	PREDICTED: probable rRNA-processing prot	0.804	0.512	0.607	6e-51
297835268	294	hypothetical protein ARALYDRAFT_479780 [	0.748	0.506	0.668	6e-51

>gi|255570978|ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis] gi|223534220|gb|EEF35935.1| rRNA-processing protein EBP2, putative [Ricinus communis]

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 139/176 (78%), Gaps = 16/176 (9%)

Query: 1   MGLPHKESTFSDEDGFEDEDLSDLN----------------EEEDVKLAEPSKQAVYNRD 44
           MG   K+ T  DE+  +DE++ +++                EEEDVKL+EPSK AVYNRD
Sbjct: 1   MGARDKDLTAYDEEPIDDEEIDNIDGDESDSEYESEPESESEEEDVKLSEPSKNAVYNRD 60

Query: 45  GLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 104
            L +KLQDI WPEN  WIHKL++DI+QEQEVDVNDDL RE +FYTQALEGTR+AFEKL++
Sbjct: 61  ALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYTQALEGTRKAFEKLET 120

Query: 105 MGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           MGLPFLRP+DYYAEMVKSD HMEKVK  LL+E++ IEEAEER+KARE+K+LAKEIQ
Sbjct: 121 MGLPFLRPSDYYAEMVKSDIHMEKVKGRLLAEKRNIEEAEERRKARESKRLAKEIQ 176

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134537|ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|222868843|gb|EEF05974.1| predicted protein [Populus trichocarpa]

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 109/164 (66%), Positives = 131/164 (79%), Gaps = 10/164 (6%)

Query: 7   ESTFSDEDGFEDEDLSDLNEE----------EDVKLAEPSKQAVYNRDGLEEKLQDIGWP 56
           E T SDE+   D+++ +L+E+          E VKL EPSK A++NRDGL +KLQDI WP
Sbjct: 7   ELTLSDEELITDDEMDNLDEKLSGSESESEDEGVKLPEPSKNAIFNRDGLADKLQDISWP 66

Query: 57  ENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYY 116
           EN GWIHKL ID +QEQEVDVNDDL RE +FYTQALEGTRQA+ KL+SMG+PFLRP DYY
Sbjct: 67  ENVGWIHKLVIDFNQEQEVDVNDDLTRELAFYTQALEGTRQAYAKLESMGIPFLRPPDYY 126

Query: 117 AEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           AEM KSD HMEKVK  LL+E++ IEEAEER+KAR++KKLAKE+Q
Sbjct: 127 AEMAKSDTHMEKVKGRLLAEKRSIEEAEERRKARDSKKLAKEVQ 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576777|ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine max]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 119/132 (90%)

Query: 29  DVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFY 88
           DV+LAEPSK AVYNRD L +KL DI WP N  WIHKL+ID+DQEQEVDVNDDL RE +FY
Sbjct: 32  DVRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFY 91

Query: 89  TQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKK 148
           TQALEGT++AFEKLQSMGLPFLRPADYYAEMVK+D HMEKVK  LLSE++++EEA+ER+K
Sbjct: 92  TQALEGTKEAFEKLQSMGLPFLRPADYYAEMVKTDGHMEKVKGRLLSEKRKMEEADERRK 151

Query: 149 AREAKKLAKEIQ 160
           AREAK+LAKEIQ
Sbjct: 152 AREAKRLAKEIQ 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806727|ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycine max] gi|255634741|gb|ACU17732.1| unknown [Glycine max]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 120/135 (88%)

Query: 26  EEEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREA 85
           ++EDVKL EPSK AVYNRD L +KL DI WPEN  WIHKL++D+DQEQEVDVNDDL RE 
Sbjct: 29  QDEDVKLTEPSKNAVYNRDALLDKLGDISWPENVEWIHKLSVDVDQEQEVDVNDDLAREL 88

Query: 86  SFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEE 145
           +FYTQALEGT++AFEK QSMGLPFLRPADYYAEMVK+D HM KVK  LL+E++++EEA+E
Sbjct: 89  AFYTQALEGTKEAFEKFQSMGLPFLRPADYYAEMVKTDGHMVKVKGRLLAEKRKMEEADE 148

Query: 146 RKKAREAKKLAKEIQ 160
           R+KAREAK+LAKEIQ
Sbjct: 149 RRKAREAKRLAKEIQ 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517997|ref|XP_003629287.1| hypothetical protein MTR_8g075400 [Medicago truncatula] gi|355523309|gb|AET03763.1| hypothetical protein MTR_8g075400 [Medicago truncatula]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 119/132 (90%)

Query: 29  DVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFY 88
           DVKLAEPSK AV NRD L +KL DI WPEN  WIHKL+IDIDQEQEVDVNDDL RE +FY
Sbjct: 97  DVKLAEPSKTAVNNRDALLDKLGDISWPENVEWIHKLSIDIDQEQEVDVNDDLARELAFY 156

Query: 89  TQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKK 148
           TQALEGTRQAFEKLQS+GLPFLRPADYYAEMVK+D+HMEKVK  LL+E++++ EAEER+K
Sbjct: 157 TQALEGTRQAFEKLQSIGLPFLRPADYYAEMVKTDSHMEKVKSRLLAEKQKMVEAEERRK 216

Query: 149 AREAKKLAKEIQ 160
           AREAK+L+KE+Q
Sbjct: 217 AREAKRLSKEVQ 228

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484899|ref|XP_003612737.1| hypothetical protein MTR_5g028350 [Medicago truncatula] gi|355514072|gb|AES95695.1| hypothetical protein MTR_5g028350 [Medicago truncatula]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/136 (76%), Positives = 119/136 (87%)

Query: 25  NEEEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKRE 84
           + EEDVKLAEPSK AV NRD + +KL DI WPEN  W HKL+IDIDQ QEVDVNDDL RE
Sbjct: 19  DSEEDVKLAEPSKTAVNNRDAILDKLGDISWPENVDWKHKLSIDIDQGQEVDVNDDLARE 78

Query: 85  ASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAE 144
            SFYTQALEGTRQAFEKL+SMGLPFLRPADYYAEMVK D+HMEKVK  LL E++++EEA+
Sbjct: 79  LSFYTQALEGTRQAFEKLESMGLPFLRPADYYAEMVKGDSHMEKVKSRLLDEKRKMEEAD 138

Query: 145 ERKKAREAKKLAKEIQ 160
           ER+KAREAK+L+KE+Q
Sbjct: 139 ERRKAREAKRLSKEVQ 154

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455559|ref|XP_002267474.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Vitis vinifera]

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 110/163 (67%), Positives = 130/163 (79%), Gaps = 11/163 (6%)

Query: 9   TFSDEDGFEDEDLSDLNEEED-----------VKLAEPSKQAVYNRDGLEEKLQDIGWPE 57
           T SDED  ED +  DL EEE            VKLAEPSK ++YN+DGL +KL DI WPE
Sbjct: 9   TLSDEDMMEDNETGDLYEEESELESESEEDEDVKLAEPSKTSIYNKDGLLDKLGDISWPE 68

Query: 58  NAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYA 117
           N GWIHKL+I+IDQEQEVDVNDD  RE SF   AL+GTRQAFE LQSMGLPFLRP+DYYA
Sbjct: 69  NVGWIHKLSINIDQEQEVDVNDDSAREGSFSILALKGTRQAFENLQSMGLPFLRPSDYYA 128

Query: 118 EMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           EMVK+D+HMEKVK  LL+++K+IEEA+ER+KAREAK++AKE+Q
Sbjct: 129 EMVKTDSHMEKVKGRLLAQKKQIEEADERRKAREAKRIAKEVQ 171

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488602|ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus]

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 107/176 (60%), Positives = 129/176 (73%), Gaps = 16/176 (9%)

Query: 1   MGLPHKESTFSDEDGFEDEDLSDLNEEEDVKLAE----------------PSKQAVYNRD 44
           MG+  K+++F +ED  ED D S  + E + +                   PSK A+YN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 45  GLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 104
           GL +KL DI WPEN  WIHKLT DI+QE+EVDVNDDL RE +FYTQAL+GTR A EK QS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 105 MGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           +GLPFLRP+DYYAEMVK+D HM+KVK  LLSEQ+++EEAEER+KAREAKKLAKEIQ
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQ 176

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451821|ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus]

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 107/176 (60%), Positives = 129/176 (73%), Gaps = 16/176 (9%)

Query: 1   MGLPHKESTFSDEDGFEDEDLSDLNEEEDVKLAE----------------PSKQAVYNRD 44
           MG+  K+++F +ED  ED D S  + E + +                   PSK A+YN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 45  GLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 104
           GL +KL DI WPEN  WIHKLT DI+QE+EVDVNDDL RE +FYTQAL+GTR A EK QS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 105 MGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           +GLPFLRP+DYYAEMVK+D HM+KVK  LLSEQ+++EEAEER+KAREAKKLAKEIQ
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQ 176

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835268|ref|XP_002885516.1| hypothetical protein ARALYDRAFT_479780 [Arabidopsis lyrata subsp. lyrata] gi|297331356|gb|EFH61775.1| hypothetical protein ARALYDRAFT_479780 [Arabidopsis lyrata subsp. lyrata]

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 103/154 (66%), Positives = 123/154 (79%), Gaps = 5/154 (3%)

Query: 12  DEDGFED---EDLSDLNEEEDV--KLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLT 66
           DED   D   E LSD + E ++  KLAEP+K AVYNRDGL +KLQDI WPE+  W HKLT
Sbjct: 17  DEDSATDSEAESLSDSDTENEITEKLAEPTKTAVYNRDGLLDKLQDISWPEDVDWTHKLT 76

Query: 67  IDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHM 126
           ++IDQ Q VDVNDDL RE +FYTQALEGTR+AF KL  MG+ FLRPA+YYAEMVKSD HM
Sbjct: 77  VEIDQGQAVDVNDDLAREMAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDIHM 136

Query: 127 EKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQ 160
           EKVK  LL E+K+IEE+EER+KAR+ K++AKE+Q
Sbjct: 137 EKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQ 170

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
TAIR|locus:2094384	293	AT3G22660 [Arabidopsis thalian	0.537	0.365	0.719	5.5e-38
WB|WBGene00015941	340	C18A3.3 [Caenorhabditis elegan	0.673	0.394	0.319	2.9e-14
UNIPROTKB|Q09958	340	C18A3.3 "Probable rRNA-process	0.673	0.394	0.319	2.9e-14
CGD|CAL0002033	426	orf19.4492 [Candida albicans (	0.507	0.237	0.390	5.8e-14
UNIPROTKB|Q59TD8	426	EBP2 "Likely EBNA-like pre-rRN	0.507	0.237	0.390	5.8e-14
SGD|S000001655	427	EBP2 "Required for 25S rRNA ma	0.502	0.234	0.355	9.3e-13
POMBASE|SPAC17H9.05	333	ebp2 "rRNA processing protein	0.527	0.315	0.358	1.3e-12
UNIPROTKB|G4MRW1	446	MGG_02453 "rRNA processing pro	0.306	0.136	0.524	2.2e-12
ASPGD|ASPL0000058158	376	AN0074 [Emericella nidulans (t	0.336	0.178	0.5	2.4e-11
UNIPROTKB|F1MUZ0	305	EBNA1BP2 "Uncharacterized prot	0.522	0.340	0.350	6.1e-10

TAIR|locus:2094384 AT3G22660 [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 77/107 (71%), Positives = 88/107 (82%)

Query:    31 KLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQ 90
             KLAEP+K A+YNRDGL +KLQDI WPE+  W HKLT++IDQ   VDVNDDL RE +FYTQ
Sbjct:    41 KLAEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQ 100

Query:    91 ALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQ 137
             ALEGTR+AF KL  MG+ FLRPA+YYAEMVKSD HMEKVK  LL E+
Sbjct:   101 ALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEK 147

GO:0005634 "nucleus" evidence=ISM

GO:0001510 "RNA methylation" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

WB|WBGene00015941 C18A3.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 45/141 (31%), Positives = 73/141 (51%)

Query:     1 MGLPHKESTFSDEDGFXXXXXXXXXXXXXVKLAEPSKQAVYNRDG-LEEKLQDIGWPENA 59
             M +   ES   D++               + +    K+ + N+   ++EKL +I   ++ 
Sbjct:    46 MDIEEVESDGDDDERELQAAFAAGLLKDGLNIQVAKKRPIINKSAEMKEKLAEI--TKDL 103

Query:    60 GWIHKLTIDIDQEQEVDV---NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYY 116
              W+  L + +    E+D    NDD +RE +FY QA +  + A+ +L ++G+  LRP DYY
Sbjct:   104 PWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYY 162

Query:   117 AEMVKSDAHMEKVKCLLLSEQ 137
             AEM KSD HM+KV+  LL  Q
Sbjct:   163 AEMAKSDTHMQKVRKRLLGIQ 183

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

UNIPROTKB|Q09958 C18A3.3 "Probable rRNA-processing protein EBP2 homolog" [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 45/141 (31%), Positives = 73/141 (51%)

Query:     1 MGLPHKESTFSDEDGFXXXXXXXXXXXXXVKLAEPSKQAVYNRDG-LEEKLQDIGWPENA 59
             M +   ES   D++               + +    K+ + N+   ++EKL +I   ++ 
Sbjct:    46 MDIEEVESDGDDDERELQAAFAAGLLKDGLNIQVAKKRPIINKSAEMKEKLAEI--TKDL 103

Query:    60 GWIHKLTIDIDQEQEVDV---NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYY 116
              W+  L + +    E+D    NDD +RE +FY QA +  + A+ +L ++G+  LRP DYY
Sbjct:   104 PWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYY 162

Query:   117 AEMVKSDAHMEKVKCLLLSEQ 137
             AEM KSD HM+KV+  LL  Q
Sbjct:   163 AEMAKSDTHMQKVRKRLLGIQ 183

GO:0005515 "protein binding" evidence=IPI

CGD|CAL0002033 orf19.4492 [Candida albicans (taxid:5476)]

 Score = 187 (70.9 bits), Expect = 5.8e-14, P = 5.8e-14
 Identities = 41/105 (39%), Positives = 64/105 (60%)

Query:    36 SKQAVYNRDGLEEKLQ--DIGWPENAGWIHKLTIDIDQ-EQEV-DVNDDLKREASFYTQA 91
             +K  + N   L E L   ++ W +++   H+     D+ E E+ D+ DD +RE +FY Q 
Sbjct:   176 TKLTINNMAALRESLARIELPWSKHSFIEHQSITSADKTESEIKDIYDDTERELAFYKQG 235

Query:    92 LEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSE 136
             L+  +Q+ + L  + +PF RP DY+AEMVKSD HM+K+K  LL+E
Sbjct:   236 LDAVKQSRKTLLKLKIPFSRPMDYFAEMVKSDEHMDKLKNKLLTE 280

GO:0003674 "molecular_function" evidence=ND

GO:0000280 "nuclear division" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0034399 "nuclear periphery" evidence=IEA

GO:0005816 "spindle pole body" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

UNIPROTKB|Q59TD8 EBP2 "Likely EBNA-like pre-rRNA processing factor EBP2p" [Candida albicans SC5314 (taxid:237561)]

 Score = 187 (70.9 bits), Expect = 5.8e-14, P = 5.8e-14
 Identities = 41/105 (39%), Positives = 64/105 (60%)

Query:    36 SKQAVYNRDGLEEKLQ--DIGWPENAGWIHKLTIDIDQ-EQEV-DVNDDLKREASFYTQA 91
             +K  + N   L E L   ++ W +++   H+     D+ E E+ D+ DD +RE +FY Q 
Sbjct:   176 TKLTINNMAALRESLARIELPWSKHSFIEHQSITSADKTESEIKDIYDDTERELAFYKQG 235

Query:    92 LEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSE 136
             L+  +Q+ + L  + +PF RP DY+AEMVKSD HM+K+K  LL+E
Sbjct:   236 LDAVKQSRKTLLKLKIPFSRPMDYFAEMVKSDEHMDKLKNKLLTE 280

GO:0003674 "molecular_function" evidence=ND

SGD|S000001655 EBP2 "Required for 25S rRNA maturation and 60S ribosomal subunit assembly" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 176 (67.0 bits), Expect = 9.3e-13, P = 9.3e-13
 Identities = 37/104 (35%), Positives = 65/104 (62%)

Query:    37 KQAVYNRDGLEEKLQ--DIGWPENAGWIHK-LTIDIDQEQEV-DVNDDLKREASFYTQAL 92
             K  V N   ++  L+   + W +++   H+ +T + + ++ + D+ DD +RE +FY Q+L
Sbjct:   192 KLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSL 251

Query:    93 EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSE 136
             +    A ++L+ + +PF RP DY+AEMVKSD HM+K+K  L+ E
Sbjct:   252 DAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEE 295

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0006364 "rRNA processing" evidence=IMP

GO:0005730 "nucleolus" evidence=IEA;IDA

GO:0000280 "nuclear division" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

GO:0034399 "nuclear periphery" evidence=IDA

POMBASE|SPAC17H9.05 ebp2 "rRNA processing protein Ebp2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 38/106 (35%), Positives = 58/106 (54%)

Query:    32 LAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQEVD-VNDDLKREASFYTQ 90
             L    K A+ N   LE   + I +P++  ++    +   +   ++ V DDL RE +FY Q
Sbjct:    86 LIRKRKLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIENVEDDLARELAFYKQ 145

Query:    91 ALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSE 136
              +   + AF KL+   +   RP DY+AEM+KSD HMEKV+  L+ E
Sbjct:   146 GVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKE 191

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=ISO;IDA

GO:0005816 "spindle pole body" evidence=IPI

GO:0006364 "rRNA processing" evidence=ISO

GO:0044732 "mitotic spindle pole body" evidence=IDA

UNIPROTKB|G4MRW1 MGG_02453 "rRNA processing protein Ebp2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 173 (66.0 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 32/61 (52%), Positives = 45/61 (73%)

Query:    76 DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLS 135
             DV+DDL RE + Y Q+L+  ++A + L++ G+PF RP DY+AEMVK D HMEKVK  L+ 
Sbjct:   227 DVSDDLARELALYKQSLDAAKRARQLLRAEGVPFTRPGDYFAEMVKPDEHMEKVKAKLVE 286

Query:   136 E 136
             +
Sbjct:   287 D 287

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000058158 AN0074 [Emericella nidulans (taxid:162425)]

 Score = 162 (62.1 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 34/68 (50%), Positives = 42/68 (61%)

Query:    70 DQEQEV-DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEK 128
             + E ++ D NDDL RE SFY  A      A + L+  G+PF RP DY+AEMVKSD HM K
Sbjct:   161 EDEMDIPDANDDLNRELSFYKTAQTAAYTARKLLKKEGVPFTRPGDYFAEMVKSDEHMGK 220

Query:   129 VKCLLLSE 136
             +K  L  E
Sbjct:   221 IKKKLYDE 228

GO:0044732 "mitotic spindle pole body" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0034399 "nuclear periphery" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0000280 "nuclear division" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|F1MUZ0 EBNA1BP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 147 (56.8 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 41/117 (35%), Positives = 62/117 (52%)

Query:    34 EPSKQAVYNRDGLEEKL----QDIGWPENA----GWIHKLT--IDIDQEQE---VDVNDD 80
             E  K+AV + +GL++ L    +D+ W E      G + +++      Q Q+   VD  DD
Sbjct:    41 EGPKKAVNDVNGLKQCLAEFKRDLEWVERLDVTLGPVPEISGPQSTSQNQDPKAVDPEDD 100

Query:    81 LKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQ 137
              KRE SFY QA         +L  + +P  RP DY+AEM KSD  M+K++  L ++Q
Sbjct:   101 FKREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDQQMQKIRQKLQAKQ 157

GO:0005730 "nucleolus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	199
pfam05890	270	pfam05890, Ebp2, Eukaryotic rRNA processing protei	2e-44

>gnl|CDD|218797 pfam05890, Ebp2, Eukaryotic rRNA processing protein EBP2

 Score =  148 bits (375), Expect = 2e-44
 Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 21/179 (11%)

Query: 17  EDEDLSDLNE----EEDVKLAEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTI---DI 69
            D +L +       +  + +    K+ + N   L+ KL+ I  P    W+ +L +   + 
Sbjct: 3   SDVELQEAFADGELKPGLNVVPHQKKTINNTAALKAKLERIKLP--LPWVERLDVTSPEP 60

Query: 70  DQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKV 129
              Q  DV DD KRE +FY QAL    +A + L+ +G+PF RP DY+AEMVKSD HM+KV
Sbjct: 61  TDLQIEDVEDDFKRELAFYKQALAAVLEARKLLKKLGVPFKRPDDYFAEMVKSDEHMQKV 120

Query: 130 KCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVEREKGRRIETLE 188
           +  LL+E    + +EE +K RE KK  K++Q           V  + ER K ++ + LE
Sbjct: 121 RKKLLAEAAAKKASEEARKQRELKKFGKQVQ-----------VEKLQERAKEKK-DMLE 167

This family consists of several Eukaryotic rRNA processing protein EBP2 sequences. Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis. This family also plays a role in chromosome segregation. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
PF05890	271	Ebp2: Eukaryotic rRNA processing protein EBP2; Int	100.0
KOG3080	328	consensus Nucleolar protein-like/EBNA1-binding pro	100.0

>PF05890 Ebp2: Eukaryotic rRNA processing protein EBP2; InterPro: IPR008610 This family consists of several eukaryotic rRNA processing protein EBP2 sequences

Probab=100.00  E-value=4.9e-59  Score=410.16  Aligned_cols=148  Identities=47%  Similarity=0.723  Sum_probs=138.2

Q ss_pred             cCCCCCcccCHHHHHHHHHhcCCCCCCCcceeeeeccCCCcc---CCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 037248           33 AEPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQEQE---VDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPF  109 (199)
Q Consensus        33 a~~~k~~InN~~~L~~kL~eI~~~~~lpWiEtL~vt~~~~~~---vDv~DDl~RE~aFY~QAl~aV~~a~~~L~~~gIpf  109 (199)
                      +.+.+.+|||+++|.++|++|.|+.++||+|||+||++.+..   .|++|||+||++||+|||+||++|+++|+++||||
T Consensus        24 ~~~~k~~inn~~~L~~kl~ei~~~~~~pWiE~L~vts~~~~~~~~~d~~dD~~RE~aFy~qAl~av~~a~~~L~~~gip~  103 (271)
T PF05890_consen   24 APEQKKAINNKEALKQKLKEIKLPKKLPWIETLDVTSPEPTDEQIKDVNDDLKRELAFYKQALEAVKEARPRLKKLGIPF  103 (271)
T ss_pred             cccccccccCHHHHHHHHHHhcccCCCCCeeEEeeecCccchhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            677999999999999999999998899999999999876654   48999999999999999999999999999999999


Q ss_pred             CCCCchhhhhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHhhc
Q 037248          110 LRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVEREKG  181 (199)
Q Consensus       110 ~RP~DYFAEMvKSD~HM~KVr~kLl~eq~~ie~sE~aKk~Re~KKfgKqVQ~ek~~eR~k~K~~~~~~r~~g  181 (199)
                      +||+||||||||||+||+|||++|+.++++|+++|++|++|++|||||+||++++++|+++|+ .+.++|+.
T Consensus       104 ~RP~DYfAEMvKSD~HM~KVr~kLl~~~~~ie~~E~~rk~Re~KKfgKqvQ~ek~~eR~keKk-~~le~Ik~  174 (271)
T PF05890_consen  104 KRPDDYFAEMVKSDEHMEKVRQKLLKEQKRIEASEEARKQRELKKFGKQVQVEKLQERAKEKK-EMLEKIKK  174 (271)
T ss_pred             cCCCcchHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999994 44444443

Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis [].

>KOG3080 consensus Nucleolar protein-like/EBNA1-binding protein [RNA processing and modification]

Probab=100.00  E-value=3.3e-51  Score=364.55  Aligned_cols=145  Identities=42%  Similarity=0.655  Sum_probs=132.3

Q ss_pred             CCCCCcccCHHHHHHHHHhcCCCCCCCcceeeeeccCC---------CccCC---CcchHHHHHHHHHHHHHHHHHHHHH
Q 037248           34 EPSKQAVYNRDGLEEKLQDIGWPENAGWIHKLTIDIDQ---------EQEVD---VNDDLKREASFYTQALEGTRQAFEK  101 (199)
Q Consensus        34 ~~~k~~InN~~~L~~kL~eI~~~~~lpWiEtL~vt~~~---------~~~vD---v~DDl~RE~aFY~QAl~aV~~a~~~  101 (199)
                      ++.+..||+..+|+++|.+|+  ..+||+|+|++++.-         ...|.   |+|||+|||+||+||++||+.|+++
T Consensus        80 e~~~d~in~~~~l~~kl~~ik--~~lew~E~ld~~~~~~~l~~ei~~~~~v~~~~~eDDf~RElaFYkQa~~aVl~A~~r  157 (328)
T KOG3080|consen   80 EGDKDAINKRDGLLDKLVAIK--NDLEWVERLDVISFVEPLTVEIDTDEAVIPNNPEDDFARELAFYKQALSAVLEAFPR  157 (328)
T ss_pred             cCccchhhhhHHHHHHHHHHH--hccccccchhhhhccCccccccccCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            568999999999999999996  689999999998431         12333   4499999999999999999999999


Q ss_pred             HHhCCCCCCCCCchhhhhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHhhc
Q 037248          102 LQSMGLPFLRPADYYAEMVKSDAHMEKVKCLLLSEQKEIEEAEERKKAREAKKLAKEIQEIGLVGRQEKVVVVMVEREKG  181 (199)
Q Consensus       102 L~~~gIpf~RP~DYFAEMvKSD~HM~KVr~kLl~eq~~ie~sE~aKk~Re~KKfgKqVQ~ek~~eR~k~K~~~~~~r~~g  181 (199)
                      |+.+||||.||+||||||+|||+||+|||++|+.+|++++++|++|++|++|||||+||.+++++||.+| +.+.+.++-
T Consensus       158 L~elgV~~~RP~DYfAEMaKSD~HMqKVr~~Li~eq~~ke~sE~ark~RelKKfgKqVQ~~~l~~Rq~EK-k~~lekiKk  236 (328)
T KOG3080|consen  158 LHELGVPFLRPTDYFAEMAKSDEHMQKVRQRLIKEQTAKERSEEARKQRELKKFGKQVQKAKLQERQREK-KETLEKIKK  236 (328)
T ss_pred             HHHcCCCccCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999 666666665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00