Citrus Sinensis ID: 037516

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
cHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEccccHHHHHHHHHccccEEEEEccccccccccccEEcccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEEccccccccccccccccccc
cHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccEEcccccccccccEEHHHHcccccccEccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcHHHcccHcHHHHHHHHHHHccccccccccccEcEccccccccccccEEEEcccccccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEcccccccHHHcccccEEEEc
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNefadltdeefiashtgykmptrnisnqsqsyannwfgypdsrrglprsidwrargavtpvknqgscgccwIFSAVAAVEGITKIRTgrlislseqqvldcsgsrgcyggwmDDAFSYIIRsqgltdervypyqrregycNWQRGAMKAARIrsyqdvptsELALRYAVsrqpvsvaidasspgfryysggvfagpcgnnlNHAVTIVGygssnegpywliknswgqnwgeggfirmrrdvggaglcgiarkasypia
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTgykmptrnisnqsqSYANNWFGYPDSRRGLPRSIDWRARGAvtpvknqgscGCCWIFSAVAAVEGITKIRTGrlislseqqvlDCSGSRGCYGGWMDDAFSYIIRSqgltdervypyQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLcgiarkasypia
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMrfkifkknfrfiekfnrEGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
*LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM**********SYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR*******
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGY********************YPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM**************NWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
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SSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query330 2.2.26 [Sep-21-2011]
A5HII1380 Actinidain OS=Actinidia d N/A no 0.972 0.844 0.447 2e-81
P00785380 Actinidain OS=Actinidia c N/A no 0.972 0.844 0.444 5e-80
O23791351 Fruit bromelain OS=Ananas N/A no 0.966 0.908 0.462 2e-79
Q9LM66356 Xylem cysteine proteinase no no 0.921 0.853 0.482 1e-78
O65493355 Xylem cysteine proteinase no no 0.918 0.853 0.498 2e-78
P80884345 Ananain OS=Ananas comosus N/A no 0.966 0.924 0.456 3e-78
Q9FGR9361 KDEL-tailed cysteine endo no no 0.975 0.891 0.451 8e-77
P43156360 Thiol protease SEN102 OS= N/A no 0.975 0.894 0.441 2e-75
P43297 462 Cysteine proteinase RD21a no no 0.915 0.653 0.448 2e-74
Q94B08376 Germination-specific cyst no no 0.896 0.787 0.469 1e-73
>sp|A5HII1|ACTN_ACTDE Actinidain OS=Actinidia deliciosa PE=1 SV=1 Back     alignment and function desciption
 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 218/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342
Cysteine protease responsible for the cleavage of kiwellin into kissper and KiTH.
Actinidia deliciosa (taxid: 3627)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 1EC: 4
>sp|P00785|ACTN_ACTCH Actinidain OS=Actinidia chinensis PE=1 SV=4 Back     alignment and function description
>sp|O23791|BROM1_ANACO Fruit bromelain OS=Ananas comosus PE=1 SV=1 Back     alignment and function description
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|P80884|ANAN_ANACO Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|Q94B08|GCP1_ARATH Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
255563110344 cysteine protease, putative [Ricinus com 0.987 0.947 0.548 1e-101
255564910341 cysteine protease, putative [Ricinus com 0.978 0.947 0.541 2e-99
255564908342 cysteine protease, putative [Ricinus com 0.972 0.938 0.543 3e-99
225443827340 PREDICTED: vignain-like [Vitis vinifera] 0.978 0.95 0.555 7e-97
50355621361 cysteine protease [Daucus carota] 0.978 0.894 0.519 1e-96
124484401339 cysteine proteinase precursor [Ipomoea n 0.975 0.949 0.526 2e-95
225446583341 PREDICTED: KDEL-tailed cysteine endopept 0.975 0.944 0.517 4e-95
13491750339 cysteine protease [Ipomoea batatas] 0.963 0.938 0.539 4e-95
147788834341 hypothetical protein VITISV_005140 [Viti 0.975 0.944 0.520 5e-95
225446581341 PREDICTED: vignain [Vitis vinifera] 0.975 0.944 0.517 5e-95
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/337 (54%), Positives = 235/337 (69%), Gaps = 11/337 (3%)

Query: 1   MLIIMVT-WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M +++VT WAS   SR+LHE S+  +H+ WM Q  R YK   EK  RFKIFK+N  FIE 
Sbjct: 12  MAMLLVTLWASQSWSRSLHEASMELRHKTWMTQYGRVYKGNVEKEKRFKIFKENVEFIES 71

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN  GN+ YKL +N F DLT+EEF ASH GY M   ++S+   SY    F Y ++   +P
Sbjct: 72  FNNNGNKPYKLGINAFTDLTNEEFRASHNGYTM---SMSSHQSSYRTKSFRY-ENVTAVP 127

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--- 176
            S+DWR +GAVT +K+QG CGCCW FSAVAA+EGITK+ TG LISLSEQ+++DC  S   
Sbjct: 128 PSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGTLISLSEQELVDCDTSGMD 187

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
           +GC GG MDDAF +II + GLT E  YPY+  +G CN ++ A  AA+I  Y++VP   E 
Sbjct: 188 QGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDGSCNTRKAANHAAKITGYENVPAYDEE 247

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
           ALR AV+ QPVSVAIDA    F++YS G+F G CG  L+H VT+VGYG+S++G  YWL+K
Sbjct: 248 ALRKAVANQPVSVAIDAGESAFQHYSSGIFTGDCGTELDHGVTVVGYGTSDDGTKYWLVK 307

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           NSWG +WGE G+IRM RD+    GLCGIA + SYP A
Sbjct: 308 NSWGTSWGEDGYIRMERDIDAKEGLCGIAMEPSYPTA 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota] Back     alignment and taxonomy information
>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil] Back     alignment and taxonomy information
>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas] Back     alignment and taxonomy information
>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.984 0.942 0.498 6.6e-81
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.951 0.884 0.507 1.2e-79
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.990 0.939 0.497 9e-77
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.918 0.875 0.503 1.5e-74
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.960 0.916 0.469 8.4e-74
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.981 0.950 0.489 9.6e-73
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.918 0.853 0.479 6.3e-69
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.921 0.853 0.460 2.7e-68
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.939 0.669 0.446 4e-67
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.978 0.894 0.426 1.7e-66
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
 Identities = 170/341 (49%), Positives = 224/341 (65%)

Query:     1 MLIIMVTW--ASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMXXXXXXXXXXX 56
             +LII+ T    S   SRT+   E S+  KHE WMA+ +R Y+++ EK M           
Sbjct:    10 VLIILFTGFRISQATSRTVIFREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKF 69

Query:    57 XXXXXXEGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQ--SQSYANNWFGYPDS 114
                   +GN++YKL +NEFAD T+EEF+A HTG K  T    ++  +++ ++  +   D 
Sbjct:    70 IENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLKGLTEVSPSKVVAKTISSQTWNVSDM 129

Query:   115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
                +  S DWRA GAVTPVK QG CGCCW FSAVAAVEG+ KI  G L+SLSEQQ+LDC 
Sbjct:   130 ---VVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSEQQLLDCD 186

Query:   175 GS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
                 RGC GG M DAF+Y+++++G+  E  Y YQ  +G C  +  A  AARI  +Q VP+
Sbjct:   187 REYDRGCDGGIMSDAFNYVVQNRGIASENDYSYQGSDGGC--RSNARPAARISGFQTVPS 244

Query:   233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-Y 290
             + E AL  AVSRQPVSV++DA+  GF +YSGGV+ GPCG + NHAVT VGYG+S +G  Y
Sbjct:   245 NNERALLEAVSRQPVSVSMDATGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKY 304

Query:   291 WLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
             WL KNSWG+ WGE G+IR+RRDV    G+CG+A+ A YP+A
Sbjct:   305 WLAKNSWGETWGEKGYIRIRRDVAWPQGMCGVAQYAFYPVA 345
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P61277CATK_MACMU3, ., 4, ., 2, 2, ., 3, 80.43550.93330.9361yesno
Q9GLE3CATK_PIG3, ., 4, ., 2, 2, ., 3, 80.43250.93330.9333yesno
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.39930.93030.8274yesno
P43235CATK_HUMAN3, ., 4, ., 2, 2, ., 3, 80.43250.93330.9361yesno
P43236CATK_RABIT3, ., 4, ., 2, 2, ., 3, 80.42630.93330.9361yesno
O70370CATS_MOUSE3, ., 4, ., 2, 2, ., 2, 70.39820.95450.9264yesno
P25326CATS_BOVIN3, ., 4, ., 2, 2, ., 2, 70.40580.93630.9335yesno
Q8HY81CATS_CANFA3, ., 4, ., 2, 2, ., 2, 70.40580.94840.9456yesno
Q23894CYSP3_DICDI3, ., 4, ., 2, 2, ., -0.38500.93630.9169yesno
O35186CATK_RAT3, ., 4, ., 2, 2, ., 3, 80.40880.91210.9148yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921
3rd Layer3.4.22.50LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-106
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-95
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 2e-76
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 2e-70
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-63
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 9e-53
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 6e-35
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 1e-33
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 9e-30
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 2e-29
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 3e-22
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 5e-22
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 3e-16
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 5e-10
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 4e-09
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 6e-07
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 7e-07
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  309 bits (794), Expect = e-106
 Identities = 113/216 (52%), Positives = 144/216 (66%), Gaps = 7/216 (3%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP S DWR +GAVTPVK+QG CG CW FSAV A+EG   I+TG+L+SLSEQQ++DC  G+
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG  D+AF YI ++ G+  E  YPY   +G C +++   K A+I+ Y DVP   E 
Sbjct: 61  NGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDEE 120

Query: 236 ALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLI 293
           AL+ A+    PVSVAIDA    F+ Y  GV+    C   L+HAV IVGYG+ N  PYW++
Sbjct: 121 ALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGTENGVPYWIV 180

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSWG +WGE G+ R+ R V     CGIA +ASYPI
Sbjct: 181 KNSWGTDWGENGYFRIARGV---NECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 330
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.75
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.73
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.61
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.93
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.57
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 96.78
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.74
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 95.68
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 91.03
COG4990195 Uncharacterized protein conserved in bacteria [Fun 82.07
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-85  Score=588.08  Aligned_cols=298  Identities=39%  Similarity=0.748  Sum_probs=264.0

Q ss_pred             hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhcccCCCCCCccc
Q 037516           20 DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISN   99 (330)
Q Consensus        20 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~~   99 (330)
                      ..+.+.|..|+.+|+|+|.+.+|..+|+.||+.|++.++++++....|.++|+|+|||||+|||++++++.+........
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~  144 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG  144 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCcc
Confidence            44588999999999999999999999999999999999999987444899999999999999999999876652110111


Q ss_pred             ccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CC
Q 037516          100 QSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RG  178 (330)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~g  178 (330)
                      .     ....+..+ ...||++||||++|.||||||||+||||||||+++++|++++|++|++++||||+|+||+.. +|
T Consensus       145 ~-----~~~~~~~~-~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~g  218 (372)
T KOG1542|consen  145 D-----AAEAPIEP-GESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNG  218 (372)
T ss_pred             c-----cccCcCCC-CCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCc
Confidence            1     01111111 34899999999999999999999999999999999999999999999999999999999987 99


Q ss_pred             CCCCChHHHHHHHHHcCCCCCCCCCcccCCCC-cccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCC
Q 037516          179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREG-YCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPG  256 (330)
Q Consensus       179 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~  256 (330)
                      |+||.+.+|++|+++.+|+..|++|||++.++ .|... .....+.|.+|..++.|+++|.+.|. +|||+|+|++.  .
T Consensus       219 C~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~-~~~~~v~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~--~  295 (372)
T KOG1542|consen  219 CNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFD-KSKIVVSIKDFSMLSNNEDQIAAWLVTFGPLSVGINAK--P  295 (372)
T ss_pred             CCCCChhHHHHHHHHhCCccccccCCccccCCCccccc-hhhceEEEeccEecCCCHHHHHHHHHhcCCeEEEEchH--H
Confidence            99999999999988888999999999999988 99998 46788999999999999999998887 69999999975  7


Q ss_pred             cccccCCEEeCC---CCCC-CCeEEEEEEeeccC-CcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeec
Q 037516          257 FRYYSGGVFAGP---CGNN-LNHAVTIVGYGSSN-EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI  329 (330)
Q Consensus       257 f~~y~~Gi~~~~---~~~~-~~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~  329 (330)
                      +++|.+||+.+.   |+.. ++|+|+|||||... .++|||||||||++|||+||+|+.||.   |+|||+++++-+.
T Consensus       296 mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~---N~CGi~~mvss~~  370 (372)
T KOG1542|consen  296 MQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS---NACGIADMVSSAA  370 (372)
T ss_pred             HHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc---cccccccchhhhh
Confidence            999999999983   8864 89999999999987 899999999999999999999999997   7899999998664

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-65
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-64
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 6e-63
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 6e-63
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 4e-62
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 1e-61
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 7e-61
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 1e-60
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 4e-60
2act_A220 Crystallographic Refinement Of The Structure Of Act 5e-60
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 8e-60
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-59
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 4e-58
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 8e-56
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 2e-55
1pci_A322 Procaricain Length = 322 3e-54
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-53
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 4e-53
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 4e-53
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 4e-53
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 6e-53
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 2e-52
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 2e-52
3hwn_A258 Cathepsin L With Az13010160 Length = 258 3e-52
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 6e-52
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 7e-52
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 1e-51
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 1e-51
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 1e-51
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 2e-51
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 2e-51
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 2e-51
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 2e-51
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 4e-51
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 1e-50
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 1e-50
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-50
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-50
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-50
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 2e-50
3of8_A221 Structural Basis For Reversible And Irreversible In 2e-50
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-50
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 3e-50
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 3e-50
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-49
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 2e-49
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 2e-49
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 2e-49
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 3e-49
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 4e-49
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 4e-49
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 4e-49
1ppo_A216 Determination Of The Structure Of Papaya Protease O 7e-49
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 1e-48
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 1e-48
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 2e-48
2vhs_A217 Cathsilicatein, A Chimera Length = 217 3e-48
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 3e-48
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 7e-48
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 3e-46
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 4e-45
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 2e-44
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 1e-43
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 1e-42
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 3e-42
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-40
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-38
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 1e-38
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-38
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 9e-38
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 1e-37
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 1e-36
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-35
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-35
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 1e-34
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 1e-34
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 1e-27
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 4e-26
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 2e-23
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 2e-23
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 3e-23
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 3e-22
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 2e-21
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 1e-20
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 1e-16
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 2e-16
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 2e-16
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 2e-16
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-15
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-15
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 2e-15
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 2e-15
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 2e-15
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 2e-15
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 2e-15
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 9e-15
1mir_A322 Rat Procathepsin B Length = 322 1e-14
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-14
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 9e-09
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-08
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 2e-07
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 2e-07
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-07
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 2e-07
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 3e-07
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 3e-07
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-06
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure 
Iteration: 1

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/216 (53%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---S 174
           LP  +DWR+ GAV  +K+QG CG CW FS +AAVEGI KI TG LISLSEQ+++DC    
Sbjct: 1   LPDYVDWRSSGAVVDIKDQGQCGSCWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ 60
Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
            +RGC GG+M D F +II + G+  E  YPY   EG CN      K   I +Y++VP  +
Sbjct: 61  NTRGCDGGFMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNN 120
Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVA++A+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++
Sbjct: 121 EWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIV 180
Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSWG  WGE G++R++R+VGG G CGIA+KASYP+
Sbjct: 181 KNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPV 216
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-166
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-158
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-157
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-156
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-151
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-150
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-147
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-145
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-131
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-130
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-127
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-127
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-127
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-126
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-126
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-125
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-125
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-125
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-125
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-119
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-118
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-116
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-116
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-115
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-115
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-114
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-114
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-113
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-113
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-112
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-102
3u8e_A222 Papain-like cysteine protease; papain-like cystein 6e-98
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 2e-96
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 3e-85
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 8e-85
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 4e-77
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 3e-75
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 3e-68
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 3e-66
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 7e-31
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 2e-21
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 3e-10
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  465 bits (1198), Expect = e-166
 Identities = 127/315 (40%), Positives = 185/315 (58%), Gaps = 11/315 (3%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
             + +      WM    + Y+N  EK  RF+IFK N  +I++ N++ N +Y L LNEFAD
Sbjct: 14  STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFAD 72

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           L+++EF   + G  +      +  + + N           LP ++DWR +GAVTPV++QG
Sbjct: 73  LSNDEFNEKYVGSLIDATIEQSYDEEFINEDIV------NLPENVDWRKKGAVTPVRHQG 126

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQG 196
           SCG CW FSAVA VEGI KIRTG+L+ LSEQ+++DC   S GC GG+   A  Y+ ++ G
Sbjct: 127 SCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 185

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           +     YPY+ ++G C  ++      +      V   +E  L  A+++QPVSV +++   
Sbjct: 186 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGR 245

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ Y GG+F GPCG  ++ AVT VGYG S    Y LIKNSWG  WGE G+IR++R  G 
Sbjct: 246 PFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGN 305

Query: 316 -AGLCGIARKASYPI 329
             G+CG+ + + YP 
Sbjct: 306 SPGVCGLYKSSYYPT 320
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.81
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.76
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.09
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.07
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 96.66
3erv_A236 Putative C39-like peptidase; structural genomics, 86.92
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=1.9e-88  Score=635.92  Aligned_cols=308  Identities=42%  Similarity=0.800  Sum_probs=267.1

Q ss_pred             hhccCCC-chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhccc
Q 037516           12 VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGY   90 (330)
Q Consensus        12 ~~~~~~~-~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~   90 (330)
                      -+...+. ++.+.++|++||++|+|+|.+.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.
T Consensus        51 y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~  129 (363)
T 3tnx_A           51 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGS  129 (363)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCS
T ss_pred             CChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccc
Confidence            3344443 788999999999999999999999999999999999999999997 78999999999999999999998876


Q ss_pred             CCCCCCcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhh
Q 037516           91 KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQV  170 (330)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l  170 (330)
                      ..........  .  .... ......+||++||||++|+|+||||||.||||||||+++++|++++++++.++.||+|+|
T Consensus       130 ~~~~~~~~~~--~--~~~~-~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~L  204 (363)
T 3tnx_A          130 IAGNYTTTEL--S--YEEV-LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQEL  204 (363)
T ss_dssp             SCSCCCCSSS--S--SSCC-CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHH
T ss_pred             cccccccccc--c--cccc-cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHH
Confidence            5433110110  0  0111 111233799999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC-CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEE
Q 037516          171 LDCSGS-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSV  248 (330)
Q Consensus       171 ~dc~~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v  248 (330)
                      +||+.. .||+||.+..|+.|+.++ |+++|++|||.+.++.|..........++.++..++ .++..++.++++|||+|
T Consensus       205 vdC~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsv  283 (363)
T 3tnx_A          205 LDCDRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSV  283 (363)
T ss_dssp             HHHCTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEE
T ss_pred             hcccCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEE
Confidence            999877 899999999999999987 999999999999888887654444556777888777 78889999999999999


Q ss_pred             EEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceee
Q 037516          249 AIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASY  327 (330)
Q Consensus       249 ~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~y  327 (330)
                      +|++..++|++|++|||..+|+..++|||+|||||+    +|||||||||++|||+|||||+|+.++ .|+|||++.|+|
T Consensus       284 ai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y  359 (363)
T 3tnx_A          284 VLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY  359 (363)
T ss_dssp             EECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred             EEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence            999876789999999999999888999999999987    699999999999999999999999876 688999999999


Q ss_pred             ecC
Q 037516          328 PIA  330 (330)
Q Consensus       328 p~~  330 (330)
                      |+.
T Consensus       360 Pik  362 (363)
T 3tnx_A          360 PVK  362 (363)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            973
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 330
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 2e-69
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 3e-63
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-61
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 3e-60
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 4e-60
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 2e-59
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-58
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-58
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 2e-58
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 4e-58
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 7e-57
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 2e-55
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 4e-55
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 2e-54
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 2e-54
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 1e-53
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 6e-50
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 6e-46
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 2e-45
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 1e-42
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 3e-07
d3gcba_ 458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 0.002
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 2e-05
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  217 bits (552), Expect = 2e-69
 Identities = 120/323 (37%), Positives = 166/323 (51%), Gaps = 24/323 (7%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + S+ A+   W A   R Y    E+  R  +++KN + IE  N+E   G  ++ +++N F
Sbjct: 5   DHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAF 63

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T EEF     G++          Q                PRS+DWR +G VTPVKN
Sbjct: 64  GDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE---------APRSVDWREKGYVTPVKN 114

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYII 192
           QG CG CW FSA  A+EG    +TGRLISLSEQ ++DCSG     GC GG MD AF Y+ 
Sbjct: 115 QGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQ 174

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDA 252
            + GL  E  YPY+  E  C +      A            +  ++   +  P+SVAIDA
Sbjct: 175 DNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDA 234

Query: 253 SSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGF 306
               F +Y  G++  P     +++H V +VGYG     S+   YWL+KNSWG+ WG GG+
Sbjct: 235 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY 294

Query: 307 IRMRRDVGGAGLCGIARKASYPI 329
           ++M +       CGIA  ASYP 
Sbjct: 295 VKMAK--DRRNHCGIASAASYPT 315
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.78
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.72
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 94.57
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 93.57
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-81  Score=580.79  Aligned_cols=299  Identities=43%  Similarity=0.840  Sum_probs=257.6

Q ss_pred             chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCCCC
Q 037516           19 EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTR   95 (330)
Q Consensus        19 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~   95 (330)
                      +..++.+|++||++|+|+|.+. |+.+|++||++|+++|++||++   ++.+|++|+|+|+|||.+||.+++++......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~~-ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCTT-HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCCH-HHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            5667889999999999999875 7789999999999999999986   56799999999999999999998876554321


Q ss_pred             CcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC
Q 037516           96 NISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG  175 (330)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~  175 (330)
                         ..     .... ..+...+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.
T Consensus        84 ---~~-----~~~~-~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~  154 (316)
T d1cs8a_          84 ---RK-----GKVF-QEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSG  154 (316)
T ss_dssp             ---SC-----CEEC-CCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred             ---cc-----Cccc-cCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccc
Confidence               11     1111 11223389999999999999999999999999999999999999999999999999999999986


Q ss_pred             C---CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEe
Q 037516          176 S---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAID  251 (330)
Q Consensus       176 ~---~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~  251 (330)
                      .   .+|.||.+..|+.|++.++++.+|.+|||.+....|... .......+..+.....+++.|+++|. .|||++++.
T Consensus       155 ~~~~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~  233 (316)
T d1cs8a_         155 PQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIPKQEKALMKAVATVGPISVAID  233 (316)
T ss_dssp             GGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEEC
T ss_pred             cccCCCCCCCchHHHHHHHHhcCcccccccccccccccccccc-cccccccccccccccCcHHHHHHHHHHhCCeEEEEE
Confidence            4   788999999999999999668899999999988888765 33344556666666678888988887 699999999


Q ss_pred             eCCCCcccccCCEEeCC-CC-CCCCeEEEEEEeecc----CCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccce
Q 037516          252 ASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSS----NEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKA  325 (330)
Q Consensus       252 ~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~----~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~  325 (330)
                      +...+|..|++|||..+ |+ ..++|||+|||||.+    ++++|||||||||++|||+|||||+|+..  |.|||++.+
T Consensus       234 ~~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~--n~CGI~~~~  311 (316)
T d1cs8a_         234 AGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR--NHCGIASAA  311 (316)
T ss_dssp             CCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSC
T ss_pred             eccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC--CcCccCCee
Confidence            98678999999999887 76 467999999999965    57899999999999999999999999863  789999999


Q ss_pred             eeecC
Q 037516          326 SYPIA  330 (330)
Q Consensus       326 ~yp~~  330 (330)
                      +||+|
T Consensus       312 ~yP~v  316 (316)
T d1cs8a_         312 SYPTV  316 (316)
T ss_dssp             EEECC
T ss_pred             eeeeC
Confidence            99986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure