Citrus Sinensis ID: 037552

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
Protein Sequence
YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFKAF
Secondary Structure (PSIPRED)
cHHHHHHccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccHHHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHccccccccHHHHHHHHHHcccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccccHHHHHHHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHEEEEHHcccHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
YERFLEEekllegedlesaHDSISafsssrgnqddifgtEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALyhsgeaysnfhpfllgdpsCIKELNQWFAkqfdtgpcqvvaeegksecsraslddasniLVRDVENSRHQRVSELQWLRLMFGCifycrhhtfyHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAgkqeqgavddqdtfLHGVRDLLsshsntqaglstyvsapRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQllfpssttaqLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIkhhsqevglqrRVFVDfvcsperlrsqvpeLTARVRGFKAF
Flexible Loop (DISEMBL)
YERFLEEEKllegedlesAHDSISafsssrgnqddiFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHgstlvqgrrarvsatstvnghlttlddslsARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIkhhsqevglqrrVFVDFVCSperlrsqvpeltarvrgfkaf
Low Complexity Region (SEG)
YerfleeekllegedlesahdsisafsssRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFKAF
Disordered region (IsUnstruct)
***********************************IFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVA*****************ILVRDVE**RHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQ***************TFLHGVRDLL********GLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPE*******************
Disordered Region (DISOPRED)
*******EKLLEGEDLESAHDSI********************************************************************************************AVLERISSTA*******************LGDPSCIKELNQWFAKQFDTG**********************************************FGCIFYCRHHTFYHV**************VTKTMLRA*****************************************LLSETIPALCWELAQLQDT*IL*GDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLF******************************FLHGV************************Q***SLHSD***********LPQDIKCINELLQQLLFPSST***************************AVEEATLEH****************QRRVFVDFVCSPERLRSQVPELTARV******
Disordered Region (DISEMBL)
YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVV***********SLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQA**********DDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFKAF
Disordered Region (DISPRO)
YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFKA*
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSxxxxxxxxxxxxxxxxxxxxxFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINELLQQLLFPSSTTAQLILAPCALMKExxxxxxxxxxxxxxxxxxxxxHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFKAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	542	2.2.26 [Sep-21-2011]
Q6DCY9	597	HAUS augmin-like complex	N/A	no	0.435	0.395	0.244	4e-06
Q68CZ6	603	HAUS augmin-like complex	yes	no	0.361	0.325	0.251	6e-05

>sp|Q6DCY9|HAUS3_XENLA HAUS augmin-like complex subunit 3 OS=Xenopus laevis GN=haus3 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 38/274 (13%)

Query: 292 SETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQ 351
           +E +P L  + AQL +  I++GDYDL++  +    SRQ +   HL+   A  + L +  +
Sbjct: 331 NEKLPGLVRDNAQLLNMPIVKGDYDLQMAHQTSCSSRQDLVCDHLMKQKASFELLQLGYE 390

Query: 352 LEKKNLFGAYSLLKVIESELQAAAGKQEQ-----------------GAVDDQDTFLHGVR 394
           LE +     Y  L  I  EL+ +  K E+                   +D +D   H + 
Sbjct: 391 LELRKHRDVYRELGSIVQELKESGDKLEERLTMLSDVNLLSASKPRSNIDSKDLTSHRLY 450

Query: 395 DLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKCINEL------ 448
            LL    NTQ    TY     + Q++S    D+ +++  L+ S  +    +++L      
Sbjct: 451 QLLDG-DNTQKLFRTYDGLESVAQKLS---QDIASMRDQLEVSEQEHSLLLSKLDSHLKE 506

Query: 449 LQQLLFPSSTTAQLILAPCALMKEL----DGIEKINAKLSAAVEEATLEHCKKSEIIKHH 504
           L+  ++P   T  L+L    L  E       +EK+N      VE       K+  +  + 
Sbjct: 507 LRDFMYPEGNT--LMLTTPELSGEFHQLGSQLEKLN---HITVEILGDLQLKRKMLESNK 561

Query: 505 SQEVGLQRRVFVDFVCSPERLRSQVPELTARVRG 538
            Q++  +++++V F  + E+L+S V +L A+  G
Sbjct: 562 LQQI--EKQLYVYFFQNEEQLKSIVGKLEAQTGG 593

Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.
Xenopus laevis (taxid: 8355)

>sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1

 Score = 49.7 bits (117), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 19/215 (8%)

Query: 157 WFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIF 216
           +  KQF  G  +VV  E  +E +   LD  +  +  + E    +R   L+  RL    I 
Sbjct: 217 YTKKQFFQGIHEVV--ESSNEDNFQLLDIQTPSICDNQEILEERR---LEMARLQLAYI- 270

Query: 217 YCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVEL 276
            C  H   H+    +S      K+  K    +L SL   A       +D+  L  K   L
Sbjct: 271 -CAQHQLIHLKASNSS-----MKSSIKWAEESLHSLTSKA-------VDKENLDAKISSL 317

Query: 277 VGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHL 336
             E+  L     ++   ++PA+  E AQL +  +++GD+DL++ ++++Y +RQ++ +  L
Sbjct: 318 TSEIMKLEKEVTQIKDRSLPAVVRENAQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQL 377

Query: 337 INHLARHQFLNIACQLEKKNLFGAYSLLKVIESEL 371
           I   A  + L ++ ++E +     Y  L+ +  EL
Sbjct: 378 IKQKASFELLQLSYEIELRKHRDIYRQLENLVQEL 412

Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
449465240	615	PREDICTED: HAUS augmin-like complex subu	0.964	0.850	0.682	0.0
255572632	616	conserved hypothetical protein [Ricinus	0.959	0.844	0.675	0.0
356563368	618	PREDICTED: HAUS augmin-like complex subu	0.963	0.844	0.636	0.0
79531960	617	uncharacterized protein [Arabidopsis tha	0.963	0.846	0.623	0.0
297792035	617	hypothetical protein ARALYDRAFT_494914 [	0.963	0.846	0.620	0.0
224129494	661	predicted protein [Populus trichocarpa]	0.940	0.771	0.590	0.0
413943938	617	hypothetical protein ZEAMMB73_378778 [Ze	0.963	0.846	0.546	1e-162
218197720	617	hypothetical protein OsI_21951 [Oryza sa	0.963	0.846	0.544	1e-161
357124996	617	PREDICTED: HAUS augmin-like complex subu	0.963	0.846	0.533	1e-157
222635095	658	hypothetical protein OsJ_20383 [Oryza sa	0.963	0.793	0.508	1e-156

>gi|449465240|ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis sativus]

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/574 (68%), Positives = 453/574 (78%), Gaps = 51/574 (8%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           Y +FLEE KLLEGEDL+SA+DSISAFSS R NQD +FG EE  LK IR +T+AYK+EA++
Sbjct: 60  YGQFLEEGKLLEGEDLDSAYDSISAFSSRRDNQDALFGGEE-GLKEIREATVAYKSEALQ 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQ+QL HLQSQ+D+LT+  STL QGRRARV+ATS+VNG LT++DDS+SARNL+MNAVL R
Sbjct: 119 LQRQLSHLQSQYDMLTSQASTLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I+STAQ+LA YHSG+      AYS+FHP+L+GD SCIKELNQWF+KQ DTGP ++VAEEG
Sbjct: 179 IASTAQELAHYHSGDEDGIYLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVAEEG 238

Query: 175 KSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTF 234
           KS+CS  SLDD SNILVRD+E S HQRVSELQ LR +FG                 TS  
Sbjct: 239 KSKCSWVSLDDMSNILVRDLETSHHQRVSELQRLRSIFG-----------------TSER 281

Query: 235 RPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLS 292
           + +   V     +A+  ++   + SDEAHIHLD H L++KH ELVGELSNLY  E+KLLS
Sbjct: 282 QWVEAQVENAKQQAILMVLKSQVTSDEAHIHLDLHSLRRKHSELVGELSNLYDKEEKLLS 341

Query: 293 ETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQL 352
           ETIP LCWELAQLQDTYILQGDYDLKVMR+EFYI RQKVFI+HL+N LARHQFL IACQ+
Sbjct: 342 ETIPDLCWELAQLQDTYILQGDYDLKVMRQEFYIDRQKVFISHLVNQLARHQFLKIACQV 401

Query: 353 EKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVR 394
           EKKN+ GAYSLLKVIESEL                  QAA+  QEQGAVDD+D+FLHGVR
Sbjct: 402 EKKNMLGAYSLLKVIESELQAYLSATKGRVGRCLALIQAASDVQEQGAVDDRDSFLHGVR 461

Query: 395 DLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL----- 448
           DLLS HSN QAG+STYVSAP I+QQIS LHSDL TLQSDL+NSLP D  +CIN+L     
Sbjct: 462 DLLSIHSNIQAGVSTYVSAPGIIQQISHLHSDLRTLQSDLENSLPGDRNRCINDLCSLIQ 521

Query: 449 -LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQE 507
            LQQLLF SSTTAQ +L P ALMKELD +EKINAKLS+AVEE TLEHCKK+EI+KHHSQE
Sbjct: 522 SLQQLLFASSTTAQPLLTPRALMKELDEMEKINAKLSSAVEEVTLEHCKKNEIVKHHSQE 581

Query: 508 VGLQRRVFVDFVCSPERLRSQVPELTARVRGFKA 541
           VGLQRRVFVDF C+PERLRSQV ELTARVR  +A
Sbjct: 582 VGLQRRVFVDFFCNPERLRSQVRELTARVRAMQA 615

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572632|ref|XP_002527249.1| conserved hypothetical protein [Ricinus communis] gi|223533342|gb|EEF35093.1| conserved hypothetical protein [Ricinus communis]

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/573 (67%), Positives = 442/573 (77%), Gaps = 53/573 (9%)

Query: 2   ERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVEL 61
           E+FL+E KLLEGEDL+ A+DSISAFSSSR NQ+ +FG EE  LK IR +T+AY+AEA+EL
Sbjct: 61  EQFLQEGKLLEGEDLDFAYDSISAFSSSRDNQEAVFGAEE-GLKEIRDATVAYRAEALEL 119

Query: 62  QKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERI 121
           Q+QLRHL SQFD+LTA  S L+QGRRARV+ATSTVNG+LT +DDSLSARNL+MN VL RI
Sbjct: 120 QRQLRHLLSQFDMLTAQASALIQGRRARVAATSTVNGYLTAIDDSLSARNLRMNEVLGRI 179

Query: 122 SSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGK 175
            STA++LA YHSG+      AYS+FHP+LLGD SC +E+NQWF+KQ DT      AEEGK
Sbjct: 180 VSTAEELAHYHSGDEDGLYLAYSDFHPYLLGDSSCTREINQWFSKQLDTTQ-DXXAEEGK 238

Query: 176 SECSRASLDDASNILVR-DVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTF 234
           S+CS  SLDD SNILVR D+E S HQRVSELQ LR +FG                 TS  
Sbjct: 239 SKCSWVSLDDISNILVRADLEKSHHQRVSELQRLRSIFG-----------------TSER 281

Query: 235 RPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLS 292
           + +   V     +A+   +   + SDEAHIHLD H L++KH ELVGELSNL+  E+KLLS
Sbjct: 282 QWVEAQVGNAKQQAILMTLKSQITSDEAHIHLDLHTLRRKHSELVGELSNLHHKEEKLLS 341

Query: 293 ETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQL 352
           ETIP LCWELAQLQDTYILQGDYDLKVMR+E+YI+RQK +I HLIN LARHQFL IACQL
Sbjct: 342 ETIPDLCWELAQLQDTYILQGDYDLKVMRQEYYINRQKAYINHLINQLARHQFLKIACQL 401

Query: 353 EKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVR 394
           EKKN+ GA+SLLKVIESEL                  QAA+  QEQGAVDD+D  LHGVR
Sbjct: 402 EKKNMLGAFSLLKVIESELQGYLSATKGRVGRCLALTQAASDIQEQGAVDDRDNLLHGVR 461

Query: 395 DLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL----- 448
           DLLS HSN QAGLSTYVSAP IVQQIS+LHSDLMTLQSDL+NSLP+D  KCINEL     
Sbjct: 462 DLLSIHSNAQAGLSTYVSAPGIVQQISALHSDLMTLQSDLENSLPEDRNKCINELCTLIQ 521

Query: 449 -LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQE 507
            LQQLLF SSTTAQ IL P  LMKELD +EKINAKLSAAVEE TLEHCKK+EI+KHH+QE
Sbjct: 522 SLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSAAVEEVTLEHCKKNEIVKHHAQE 581

Query: 508 VGLQRRVFVDFVCSPERLRSQVPELTARVRGFK 540
           VGLQRRVFVDF C+PERLRSQV ELTARVR  +
Sbjct: 582 VGLQRRVFVDFFCNPERLRSQVRELTARVRALQ 614

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563368|ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max]

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/575 (63%), Positives = 430/575 (74%), Gaps = 53/575 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+F +E KLLEGEDL+ A+DSISAFS  R NQ+ +FGTEE  LK I+ +TLAY+ EA+ 
Sbjct: 60  YEQFKQEGKLLEGEDLDFAYDSISAFSDRRDNQEAVFGTEE-GLKDIKEATLAYREEALA 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQ+QLRHLQSQFD+L+   STL QGRRAR++ATS VNGHL  +DDSLS RNLQMN VLER
Sbjct: 119 LQRQLRHLQSQFDMLSGQASTLTQGRRARLAATSIVNGHLANIDDSLSVRNLQMNGVLER 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I+STA +LA YHSG+      AYS+F+ FLLGD SC+KELNQWFAKQ DTGP ++VAEEG
Sbjct: 179 IASTAHELAHYHSGDEDDIYLAYSDFNQFLLGDSSCLKELNQWFAKQLDTGPFRLVAEEG 238

Query: 175 KSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTF 234
           KS+CS  +LDD SN  VRD+E S HQRVSEL+ LR +FG                  S  
Sbjct: 239 KSKCSWVNLDDISNTYVRDLEKSHHQRVSELRRLRSIFG-----------------VSEK 281

Query: 235 RPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLS 292
           + +   V     +A+   +   ++SDEAHIHLD H L++KH EL GELSNLY  E+KLLS
Sbjct: 282 QWVEAQVENAKQQAILMTLKSQVSSDEAHIHLDLHSLRRKHSELKGELSNLYNHEEKLLS 341

Query: 293 ETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQL 352
           ETI  LCWELAQLQDTYILQGDYDLKVMR+E+YI+RQK FI HLIN LARHQFL +ACQL
Sbjct: 342 ETISDLCWELAQLQDTYILQGDYDLKVMRQEYYINRQKAFINHLINLLARHQFLKMACQL 401

Query: 353 EKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVR 394
           EKK++ GA+SLLKVIESEL                  QAA+  QEQG V D D FLH +R
Sbjct: 402 EKKHMLGAFSLLKVIESELQAYLSATEGRVGRCLALIQAASDVQEQGGVHDSDHFLHAIR 461

Query: 395 DLLSSHSNT--QAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL--- 448
           D+L  +SNT  QA LSTYVSAP IVQQIS+LHSDL++LQSDL+NSLP+D  +CINEL   
Sbjct: 462 DMLKIYSNTQAQATLSTYVSAPGIVQQISALHSDLLSLQSDLENSLPEDRNRCINELRNL 521

Query: 449 ---LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHS 505
              LQ+LLF SSTTAQ IL P  LMKELD +EKINAKLS AVEE TLEH KK+EI+KHH 
Sbjct: 522 IKNLQKLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHVKKNEIVKHHK 581

Query: 506 QEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFK 540
           QE+GLQRRVFVDF C+PERLRSQV +LT RVR  +
Sbjct: 582 QEIGLQRRVFVDFFCNPERLRSQVRDLTDRVRAMQ 616

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79531960|ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] gi|110737416|dbj|BAF00652.1| hypothetical protein [Arabidopsis thaliana] gi|332008298|gb|AED95681.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/574 (62%), Positives = 429/574 (74%), Gaps = 52/574 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+F  + KLLEG+DL+ A+DSISAFSS R NQ+ +FG EE  +K +R +TLA+KAEA+E
Sbjct: 60  YEQFQRDGKLLEGDDLDQAYDSISAFSSRRNNQEAVFGAEE-SIKEVRDATLAHKAEALE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQ+QLR LQ+Q+D+LT   S L+QGRRARV+ATS V+G +T ++DSLSARNLQMN VL R
Sbjct: 119 LQRQLRRLQTQYDLLTGQSSALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           ++ST+Q+LA YHSGE      AYS+FH +L GD +C KELNQWFAKQ DTGP ++VAEEG
Sbjct: 179 LASTSQELAHYHSGEEDGIYLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEG 238

Query: 175 KSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTF 234
           KS+CS  SLDD SN+L RD+E S+HQRV+ELQ LR +FG                 TS  
Sbjct: 239 KSKCSWVSLDDTSNML-RDLEKSQHQRVAELQRLRSIFG-----------------TSER 280

Query: 235 RPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLS 292
           + +   V     +A+   +   + S EAHIH D H L++KH +LV E+S LY  E+KLLS
Sbjct: 281 QWIEAQVENAKQQAILLTLKSQVTSVEAHIHFDLHSLRRKHADLVEEISTLYQKEEKLLS 340

Query: 293 ETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQL 352
           ETIP LCWELAQLQDTYILQGDYDLKVMR+E YIS+QKVFI HL+N LARHQFL +ACQL
Sbjct: 341 ETIPELCWELAQLQDTYILQGDYDLKVMRQELYISKQKVFINHLVNQLARHQFLKLACQL 400

Query: 353 EKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVR 394
           EKKN+ GA+SLLKVIESEL                  QAA+  QEQGAVDD+D+FLHGVR
Sbjct: 401 EKKNMLGAFSLLKVIESELQGYLSATRSRVGRCSALIQAASDVQEQGAVDDRDSFLHGVR 460

Query: 395 DLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL----- 448
           DLLS HSNTQAGLSTYVSAP I+QQI +L SDL +LQSDL+NSLP D  +CINEL     
Sbjct: 461 DLLSIHSNTQAGLSTYVSAPAIIQQIVALQSDLSSLQSDLENSLPDDRNRCINELCTHIQ 520

Query: 449 -LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQE 507
            LQQLLF SSTTAQ IL P  LMKELD + KIN+KLS AVEE TLEH  K EI+KHH+++
Sbjct: 521 NLQQLLFASSTTAQPILTPWPLMKELDEMGKINSKLSTAVEEVTLEHRNKREIVKHHAKD 580

Query: 508 VGLQRRVFVDFVCSPERLRSQVPELTARVRGFKA 541
           V LQRRVFVDF C+PERLR+QV EL A VR  +A
Sbjct: 581 VELQRRVFVDFFCNPERLRNQVRELNALVRARQA 614

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792035|ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata]

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/574 (62%), Positives = 429/574 (74%), Gaps = 52/574 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+F  + KLLEG+DL+ A+DSISAFSS R NQ+ +FG EE  +K +R +TLA+KAEA+E
Sbjct: 60  YEQFQRDGKLLEGDDLDQAYDSISAFSSRRNNQEAVFGAEE-SIKEVRDATLAHKAEALE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQ+QLR LQ+Q+D+LT   S L+QGRRARV+ATS V+G +T+++DSLSARNLQMN VL R
Sbjct: 119 LQRQLRRLQTQYDLLTGQSSALIQGRRARVAATSAVSGQITSIEDSLSARNLQMNGVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           ++ST+Q+LA YHSGE      AYS+FH +L GD +C KELNQWFAKQ DTGP ++VAEEG
Sbjct: 179 LASTSQELAHYHSGEEDGIYLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEG 238

Query: 175 KSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTF 234
           KS+CS  SLDD SN+L RD+E S+HQRV+ELQ LR +FG                 TS  
Sbjct: 239 KSKCSWVSLDDTSNML-RDLEKSQHQRVAELQRLRSIFG-----------------TSER 280

Query: 235 RPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLS 292
           + +   V     +A+   +   + S EAHIH D H L++KH +LV E+S LY  E+KLLS
Sbjct: 281 QWIEAQVENAKQQAILLTLKSQVTSVEAHIHFDLHSLRRKHADLVEEISTLYQKEEKLLS 340

Query: 293 ETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQL 352
           ETIP LCWELAQLQDTYILQG YDLKVMR+E YIS+QKVFI HL+N LARHQFL +ACQL
Sbjct: 341 ETIPELCWELAQLQDTYILQGYYDLKVMRQELYISKQKVFINHLVNQLARHQFLKLACQL 400

Query: 353 EKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVR 394
           EKKN+ GA+SLLKVIESEL                  QAA+  QEQGAVDD+D+FLHGVR
Sbjct: 401 EKKNMLGAFSLLKVIESELQGYLSATRSRVGRCSALIQAASDVQEQGAVDDRDSFLHGVR 460

Query: 395 DLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL----- 448
           DLLS HS+TQAGLSTYVSAP I+QQI +L SDL +LQSDL+NSLP D  +CINEL     
Sbjct: 461 DLLSIHSSTQAGLSTYVSAPAIIQQIVALQSDLSSLQSDLENSLPDDRNRCINELCTHIQ 520

Query: 449 -LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQE 507
            LQQLLF SSTTAQ IL P  LMKELD + KIN+KLS AVEE TLEH  K EI+KHH+++
Sbjct: 521 NLQQLLFASSTTAQPILTPWPLMKELDEMGKINSKLSTAVEEVTLEHRNKREIVKHHAKD 580

Query: 508 VGLQRRVFVDFVCSPERLRSQVPELTARVRGFKA 541
           V LQRRVFVDF C+PERLR+QV EL A VR  +A
Sbjct: 581 VELQRRVFVDFFCNPERLRNQVRELNALVRARQA 614

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129494|ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1| predicted protein [Populus trichocarpa]

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/630 (59%), Positives = 427/630 (67%), Gaps = 120/630 (19%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRV----------- 49
           YE+FL+EEKLLEGEDLE A+DSISAFSS R NQ+++FG EE  LK IR            
Sbjct: 60  YEQFLQEEKLLEGEDLEFAYDSISAFSSRRDNQEEVFGAEEP-LKDIRQFPLLNHLFSSL 118

Query: 50  --------STLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLT 101
                   +T AYKAEA+ELQKQLRHLQ+QFD+L+   S L+QGRRARV+ATSTVNG L 
Sbjct: 119 QTFQLYADATSAYKAEALELQKQLRHLQAQFDLLSGQASALIQGRRARVAATSTVNGCLA 178

Query: 102 TLDDSLSARNLQMNAVLERISSTAQDLALYHSGE-------------------------- 135
            +DD+LSARNL+MN VL RI+STAQ+L+ YHSG+                          
Sbjct: 179 AVDDTLSARNLRMNEVLGRIASTAQELSHYHSGDGSVSLSVFNLLFWPFEIIELQSTFNF 238

Query: 136 -------------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRAS 182
                        AYS+FH + L D SC KE+NQWF+KQ DTGP ++VAEEGKS+CS  S
Sbjct: 239 RSFTFKHMGGIYLAYSDFHQYWLQDSSCTKEINQWFSKQLDTGPFRLVAEEGKSKCSWVS 298

Query: 183 LDDASNILVR---DVENSRHQR--VSELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPL 237
           LDD SNIL     D   ++  R   SE QW+                             
Sbjct: 299 LDDISNILASLMVDKNANKFDRFGTSERQWVE---------------------------- 330

Query: 238 FKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETI 295
              V     +A+  ++   + SDEAHIHLD H L++KHV LV ELSNL+  E KLLSETI
Sbjct: 331 -AQVENAKQQAILMVLKSQVTSDEAHIHLDLHSLRRKHVVLVEELSNLHHKEDKLLSETI 389

Query: 296 PALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKK 355
           P LCWELAQLQDTYILQGDYDLKVMR+E YI+RQK+FI HLIN LARHQFL IACQLEKK
Sbjct: 390 PDLCWELAQLQDTYILQGDYDLKVMRQECYINRQKMFINHLINQLARHQFLKIACQLEKK 449

Query: 356 NLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHGVRDLL 397
           N+ GAYSLLKVIESEL                  QAA+  QEQGAVDD+DT LHG+RDLL
Sbjct: 450 NMLGAYSLLKVIESELQGYLSATKGRVGCCLALTQAASDIQEQGAVDDRDTLLHGIRDLL 509

Query: 398 SSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQD-IKCINEL------LQ 450
           S HSN QAGLS YVSAP IVQQIS+LH+DLMTLQSDL+NSLP+D  +CI EL      LQ
Sbjct: 510 SIHSNAQAGLSIYVSAPGIVQQISALHADLMTLQSDLENSLPEDRNRCIIELCTLIQSLQ 569

Query: 451 QLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGL 510
           QLLF SSTTAQ IL P  LMKELD +EKINAKLS AVEE TLEHCKK+EI+KHHSQEVGL
Sbjct: 570 QLLFASSTTAQPILTPRTLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIVKHHSQEVGL 629

Query: 511 QRRVFVDFVCSPERLRSQVPELTARVRGFK 540
           QRRVFVDF C+PERLRSQV ELTARVR  +
Sbjct: 630 QRRVFVDFFCNPERLRSQVRELTARVRALQ 659

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413943938|gb|AFW76587.1| hypothetical protein ZEAMMB73_378778 [Zea mays]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 314/575 (54%), Positives = 407/575 (70%), Gaps = 53/575 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+ +EE +LLEGEDL+SA DSISAFSS + NQ+ +FG+EE  L  IR + LAY+AE  E
Sbjct: 60  YEQLVEEGRLLEGEDLDSAFDSISAFSSKKDNQEAVFGSEETILD-IREAKLAYRAEVFE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQKQL   Q+QFD+L    STL+QGRR+RVSA S V+G L +LD+ LS+RNL+MN+VL R
Sbjct: 119 LQKQLVRQQAQFDLLAGQASTLIQGRRSRVSAMSAVSGELISLDEILSSRNLEMNSVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I++T Q+LA YHSG+      AYS+FH +++GD +C KELN+WF+KQF+ GP ++VAEEG
Sbjct: 179 ITATTQELAHYHSGDEESIYLAYSDFHSYVVGDLACTKELNRWFSKQFEKGPFRLVAEEG 238

Query: 175 KSECSRASLDDASNILVR-DVENSRH-QRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTS 232
           KS+CS  SLDD +N L+R D E S H QRV+ELQ LR +F                  TS
Sbjct: 239 KSKCSWVSLDDITNCLIRGDSEKSHHHQRVAELQRLRSIFA-----------------TS 281

Query: 233 TFRPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKL 290
             + +   V     +A+ S++   ++SDEAHIH D H L++K  EL GELS L    + L
Sbjct: 282 ERQWIEAQVENAKQQAILSILKAQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAL 341

Query: 291 LSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIAC 350
           +SETIP LC ELAQLQ TYILQGDYDLKVMR+E+YI+RQK FI HL+N LARHQFL IAC
Sbjct: 342 VSETIPCLCSELAQLQGTYILQGDYDLKVMRQEYYINRQKTFINHLVNQLARHQFLKIAC 401

Query: 351 QLEKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHG 392
           QLE+KN+  AYSLL+VIESEL                  QAA+  +EQGA+DD+DTFLH 
Sbjct: 402 QLERKNIASAYSLLRVIESELQSYLSAVNTRLGHYNSLIQAASEVREQGAIDDRDTFLHA 461

Query: 393 VRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIK-CINEL--- 448
           VRDLL  HSN QA + TY+SA  +VQQIS+L SDL++LQS+L+N+LP D K CINEL   
Sbjct: 462 VRDLLCIHSNVQATVPTYMSAHALVQQISALQSDLLSLQSELENTLPADRKRCINELCTL 521

Query: 449 ---LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHS 505
              ++QLLF SSTTA+ IL P  LM+ LD +E  NA++  +VEE T    +K +I ++ +
Sbjct: 522 IQTVEQLLFASSTTAEPILTPWPLMRALDDMENANAQVEVSVEEVTKARTQKIKIFENRA 581

Query: 506 QEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFK 540
            EVG +R++FVDF C+PERL++QV ELT+RV+  +
Sbjct: 582 HEVGRERQIFVDFFCNPERLKNQVRELTSRVKALQ 616

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218197720|gb|EEC80147.1| hypothetical protein OsI_21951 [Oryza sativa Indica Group]

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 313/575 (54%), Positives = 404/575 (70%), Gaps = 53/575 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+ +EE +LLEGEDL+SA DSISAFSS + NQ+ +FG+EE  L  IR + LAY+AE  E
Sbjct: 60  YEQLVEEGRLLEGEDLDSAFDSISAFSSKKDNQEAVFGSEETILD-IREAKLAYRAEVFE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQKQL   Q+QFD+L    STL+QGRRARV+A S V+G L +LD+ LS+RNL+MNAVL R
Sbjct: 119 LQKQLARQQAQFDLLAGQASTLIQGRRARVTAMSAVSGQLISLDEQLSSRNLEMNAVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I++T Q+LA YHSG+      AYS+FHP+++GD +C KELN+WF+KQF+ GP ++VAEEG
Sbjct: 179 ITATTQELAHYHSGDDESIYLAYSDFHPYVVGDLACTKELNRWFSKQFEKGPFRLVAEEG 238

Query: 175 KSECSRASLDDASNILVR-DVENSRH-QRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTS 232
           KS+CS  SLDD +N L+R D E S H QRV+ELQ LR +F                  TS
Sbjct: 239 KSKCSWVSLDDITNGLIRGDSEKSHHHQRVAELQRLRSIFA-----------------TS 281

Query: 233 TFRPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKL 290
             + +   V     +A+ S++   ++SDEAHIH D H L++K  EL GELS L    +  
Sbjct: 282 ERQWIEAQVENAKQQAILSILKSQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAF 341

Query: 291 LSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIAC 350
           +SETIP LC ELAQLQ TYILQGDYDLKVMR+E+YI+RQK FI+HL N LARHQFL IAC
Sbjct: 342 VSETIPCLCSELAQLQGTYILQGDYDLKVMRQEYYINRQKTFISHLANQLARHQFLKIAC 401

Query: 351 QLEKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHG 392
           QLE+KN+  AYSLL+VIESEL                  QAA   +EQGA+DD+DT LH 
Sbjct: 402 QLERKNIASAYSLLRVIESELQSYLSAVNTRLGHCTSLIQAATEVREQGAIDDRDTLLHA 461

Query: 393 VRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIK-CINEL--- 448
           VRDLL  HSN QA + TY+SA  +VQQIS+L SDL++LQS+L+++LP D K CINEL   
Sbjct: 462 VRDLLCVHSNVQATMPTYMSAHALVQQISALQSDLLSLQSELESALPADRKRCINELCTL 521

Query: 449 ---LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHS 505
              ++QLLF SSTTA+ IL P  LM+ LD +E  NA++  +VEE T    +K +I ++ +
Sbjct: 522 IQTVEQLLFASSTTAEPILTPWPLMRALDDMENANAQVEVSVEEVTKARTQKIKIFENRA 581

Query: 506 QEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFK 540
            EVG +R+VFVDF  +PERL++QV ELT+RV+  +
Sbjct: 582 HEVGRERQVFVDFFSNPERLKNQVRELTSRVKALQ 616

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357124996|ref|XP_003564182.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Brachypodium distachyon]

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/575 (53%), Positives = 403/575 (70%), Gaps = 53/575 (9%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+ +EE +LLEGEDL+SA DSISAFSS + NQ+ +F  EE  L  IR + +AY+AE  E
Sbjct: 60  YEQLVEEGRLLEGEDLDSAFDSISAFSSKKDNQEAVFEAEETILD-IREAKVAYRAEVFE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQKQL   Q+QFD+L+   S+L+QGRRARVSA STVN  L +LD+ LS+RN++MNAVL R
Sbjct: 119 LQKQLARQQAQFDLLSGQASSLIQGRRARVSAMSTVNVQLISLDEILSSRNIEMNAVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I++T Q+LA YHSG+      AYS+F+P+++GD +C KELN+WF+KQF+ GP ++VAEEG
Sbjct: 179 IAATTQELAHYHSGDEDSIYLAYSDFNPYVIGDLACTKELNRWFSKQFEKGPFRLVAEEG 238

Query: 175 KSECSRASLDDASNILVR-DVENSRH-QRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTS 232
           KS+CS  SLDD +N L R D E S H QRV+ELQ LR +F                  TS
Sbjct: 239 KSKCSWVSLDDITNCLARGDSEKSHHHQRVAELQRLRSIFA-----------------TS 281

Query: 233 TFRPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKL 290
             + +   V     +A+ S++   ++SDEAHIH D H L++K  EL GELS L    +  
Sbjct: 282 ERQWVEAQVENAKQQAILSILKSQVSSDEAHIHRDIHSLRRKSSELAGELSTLSQKVQAF 341

Query: 291 LSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIAC 350
           +SETIP LC ELAQLQ TYILQGDYDLKVMR+E+YI+RQK FI HL+N L++HQFL IAC
Sbjct: 342 VSETIPCLCSELAQLQGTYILQGDYDLKVMRQEYYINRQKTFINHLVNQLSKHQFLKIAC 401

Query: 351 QLEKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHG 392
           QLE+K++  AYSLL+VIESEL                  QAA+  +EQGA+DD+DTFLH 
Sbjct: 402 QLERKHIASAYSLLRVIESELQSYLTAVNTRLGHYNSLIQAASEVREQGAIDDRDTFLHA 461

Query: 393 VRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIK-CINEL--- 448
           VRDLL  HSN QA + TY+SA  +VQQIS+L SDL++LQS+L+N+LP D K CINEL   
Sbjct: 462 VRDLLCIHSNAQAAVPTYMSAHALVQQISALQSDLLSLQSELENTLPADRKRCINELCTL 521

Query: 449 ---LQQLLFPSSTTAQLILAPCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHS 505
              ++QLLF SSTTA+ +L P  LM+ LD +E  NA++  +VEE T    +K +I ++ +
Sbjct: 522 IQTVEQLLFASSTTAEPVLTPWPLMRALDDMENANAQVEVSVEEVTKARTQKIKIFENRA 581

Query: 506 QEVGLQRRVFVDFVCSPERLRSQVPELTARVRGFK 540
            EVG +R+VFVDF  + ERL++QV ELT+RV+  +
Sbjct: 582 HEVGRERQVFVDFFSNHERLKNQVRELTSRVKALQ 616

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222635095|gb|EEE65227.1| hypothetical protein OsJ_20383 [Oryza sativa Japonica Group]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 313/616 (50%), Positives = 403/616 (65%), Gaps = 94/616 (15%)

Query: 1   YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVE 60
           YE+ +EE +LLEGEDL+SA DSISAFSS + NQ+ +FG+EE  L  IR   LAY+AE  E
Sbjct: 60  YEQLVEEGRLLEGEDLDSAFDSISAFSSKKDNQEAVFGSEETILD-IREEKLAYRAEVFE 118

Query: 61  LQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLER 120
           LQKQL   Q+QFD+L    STL+QGRRARV+A S V+G L +LD+ LS+RNL+MNAVL R
Sbjct: 119 LQKQLARQQAQFDLLAGQASTLIQGRRARVTAMSAVSGQLISLDEQLSSRNLEMNAVLGR 178

Query: 121 ISSTAQDLALYHSGE------AYSNFHPFLLGDPSCIKELNQWFAKQFDTGPCQVVAEEG 174
           I++T Q+LA YHSG+      AYS+FHP+++GD +C KELN+WF+KQF+ GP ++VAEEG
Sbjct: 179 ITATTQELAHYHSGDDESIYLAYSDFHPYVVGDLACTKELNRWFSKQFEKGPFRLVAEEG 238

Query: 175 KSECSRASLDDASNILVR-DVENSRH-QRVSELQWLRLMFGCIFYCRHHTFYHVFFRYTS 232
           KS+CS  SLDD +N L+R D E S H QRV+ELQ LR +F                  TS
Sbjct: 239 KSKCSWVSLDDITNGLIRGDSEKSHHHQRVAELQRLRSIFA-----------------TS 281

Query: 233 TFRPLFKNVTKTMLRALFSLV--DLASDEAHIHLDRHLLKKKHVELVGELSNLYLTEKKL 290
             + +   V     +A+ S++   ++SDEAHIH D H L++K  EL GELS L    +  
Sbjct: 282 ERQWIEAQVENAKQQAILSILKSQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAF 341

Query: 291 LSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIAC 350
           +SETIP LC ELAQLQ TYILQGDYDLKVMR+E+YI+RQK FI+HL N LARHQFL IAC
Sbjct: 342 VSETIPCLCSELAQLQGTYILQGDYDLKVMRQEYYINRQKTFISHLANQLARHQFLKIAC 401

Query: 351 QLEKKNLFGAYSLLKVIESEL------------------QAAAGKQEQGAVDDQDTFLHG 392
           QLE+KN+  AYSLL+VIESEL                  QAA   +EQGA+DD+DT LH 
Sbjct: 402 QLERKNIASAYSLLRVIESELQSYLSAVNTRLGHCTSLIQAATEVREQGAIDDRDTLLHA 461

Query: 393 VRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIK-CINEL--- 448
           VRDLL  HSN QA + TY+SA  +VQQIS+L SDL++LQS+L+++LP D K CINEL   
Sbjct: 462 VRDLLCVHSNVQATMPTYMSAHALVQQISALQSDLLSLQSELESALPADRKRCINELVSS 521

Query: 449 --------------------------------------------LQQLLFPSSTTAQLIL 464
                                                       ++QLLF SSTTA+ IL
Sbjct: 522 DLSKPTHILGLVNRTVVSHVVKAVRHPNSWQSIGSMVRCTLIQTVEQLLFASSTTAEPIL 581

Query: 465 APCALMKELDGIEKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPER 524
            P  LM+ LD +E  NA++  +VEE T    +K +I ++ + EVG +R+VFVDF  +PER
Sbjct: 582 TPWPLMRALDDMENANAQVEVSVEEVTKARTQKIKIFENRAHEVGRERQVFVDFFSNPER 641

Query: 525 LRSQVPELTARVRGFK 540
           L++QV ELT+RV+  +
Sbjct: 642 LKNQVRELTSRVKALQ 657

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
TAIR|locus:2166071	617	AUG3 "AT5G48520" [Arabidopsis	0.909	0.799	0.622	2.8e-160
UNIPROTKB|B4DF64	489	HAUS3 "cDNA FLJ52073" [Homo sa	0.566	0.627	0.220	1.4e-05
UNIPROTKB|Q68CZ6	603	HAUS3 "HAUS augmin-like comple	0.695	0.625	0.212	1.5e-05
RGD|1591723	533	Haus3 "HAUS augmin-like comple	0.221	0.225	0.253	7.4e-05
UNIPROTKB|F1NCU4	610	HAUS3 "Uncharacterized protein	0.485	0.431	0.207	0.00031
UNIPROTKB|F1PDJ8	603	HAUS3 "Uncharacterized protein	0.199	0.179	0.259	0.00066

TAIR|locus:2166071 AUG3 "AT5G48520" [Arabidopsis thaliana (taxid:3702)]

 Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
 Identities = 339/545 (62%), Positives = 405/545 (74%)

Query:    30 RGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRAR 89
             R NQ+ +FG EE  +K +R +TLA+KAEA+ELQ+QLR LQ+Q+D+LT   S L+QGRRAR
Sbjct:    89 RNNQEAVFGAEE-SIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQSSALIQGRRAR 147

Query:    90 VSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLALYHSGE------AYSNFHPF 143
             V+ATS V+G +T ++DSLSARNLQMN VL R++ST+Q+LA YHSGE      AYS+FH +
Sbjct:   148 VAATSAVSGQITAIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGIYLAYSDFHAY 207

Query:   144 LLGDPSCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVS 203
             L GD +C KELNQWFAKQ DTGP ++VAEEGKS+CS  SLDD SN+L RD+E S+HQRV+
Sbjct:   208 LAGDSACTKELNQWFAKQLDTGPYRLVAEEGKSKCSWVSLDDTSNML-RDLEKSQHQRVA 266

Query:   204 ELQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLV--DLASDEAH 261
             ELQ LR +FG                 TS  + +   V     +A+   +   + S EAH
Sbjct:   267 ELQRLRSIFG-----------------TSERQWIEAQVENAKQQAILLTLKSQVTSVEAH 309

Query:   262 IHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMR 321
             IH D H L++KH +LV E+S LY  E+KLLSETIP LCWELAQLQDTYILQGDYDLKVMR
Sbjct:   310 IHFDLHSLRRKHADLVEEISTLYQKEEKLLSETIPELCWELAQLQDTYILQGDYDLKVMR 369

Query:   322 KEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQ--------- 372
             +E YIS+QKVFI HL+N LARHQFL +ACQLEKKN+ GA+SLLKVIESELQ         
Sbjct:   370 QELYISKQKVFINHLVNQLARHQFLKLACQLEKKNMLGAFSLLKVIESELQGYLSATRSR 429

Query:   373 ---------AAAGKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSL 423
                      AA+  QEQGAVDD+D+FLHGVRDLLS HSNTQAGLSTYVSAP I+QQI +L
Sbjct:   430 VGRCSALIQAASDVQEQGAVDDRDSFLHGVRDLLSIHSNTQAGLSTYVSAPAIIQQIVAL 489

Query:   424 HSDLMTLQSDLKNSLPQDI-KCINEL------LQQLLFPSSTTAQLILAPCALMKELDGI 476
              SDL +LQSDL+NSLP D  +CINEL      LQQLLF SSTTAQ IL P  LMKELD +
Sbjct:   490 QSDLSSLQSDLENSLPDDRNRCINELCTHIQNLQQLLFASSTTAQPILTPWPLMKELDEM 549

Query:   477 EKINAKLSAAVEEATLEHCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPELTARV 536
              KIN+KLS AVEE TLEH  K EI+KHH+++V LQRRVFVDF C+PERLR+QV EL A V
Sbjct:   550 GKINSKLSTAVEEVTLEHRNKREIVKHHAKDVELQRRVFVDFFCNPERLRNQVRELNALV 609

Query:   537 RGFKA 541
             R  +A
Sbjct:   610 RARQA 614

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005819 "spindle" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0080175 "phragmoplast microtubule organization" evidence=IMP

UNIPROTKB|B4DF64 HAUS3 "cDNA FLJ52073" [Homo sapiens (taxid:9606)]

 Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 78/353 (22%), Positives = 150/353 (42%)

Query:    44 LKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGH---- 99
             LK  + S L  K   ++  K+L  L+ +   L    +  +Q RR +    ++V  H    
Sbjct:    81 LKTCKTSDL--KTPRLD-DKELEKLEDEVQTLLKLKNLKIQ-RRNKCQLMASVTSHKSLR 136

Query:   100 LTTLDDSLSARNLQ----MNAVLERISSTAQDLA--------LYHSGEAYSNFHPFL-LG 146
             L   ++  + +  Q    +NA++ +IS+  Q L          +         +P + L 
Sbjct:   137 LNAKEEEATKKLKQSQGILNAMITKISNELQALTDEVTQLMMFFRHSNLGQGTNPLVFLS 196

Query:   147 DPSCIKELNQWFAKQFDTGPCQVVAE----EGKSECSRASLDDASNIL-VRDVENSRHQR 201
               S  K L+Q   ++  T    +  +    +G  E   +S +D   +L ++      +Q 
Sbjct:   197 QFSLEKYLSQ---EEQSTAALTLYTKKQFFQGIHEVVESSNEDNFQLLDIQTPSICDNQE 253

Query:   202 VSE---LQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASD 258
             + E   L+  RL    I  C  H   H+    +S      K+  K    +L SL   A  
Sbjct:   254 ILEERRLEMARLQLAYI--CAQHQLIHLKASNSS-----MKSSIKWAEESLHSLTSKA-- 304

Query:   259 EAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLK 318
                  +D+  L  K   L  E+  L     ++   ++PA+  E AQL +  +++GD+DL+
Sbjct:   305 -----VDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVVRENAQLLNMPVVKGDFDLQ 359

Query:   319 VMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESEL 371
             + ++++Y +RQ++ +  LI   A  + L ++ ++E +     Y  L+ +  EL
Sbjct:   360 IAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLVQEL 412

GO:0051225 "spindle assembly" evidence=IEA

GO:0070652 "HAUS complex" evidence=IEA

UNIPROTKB|Q68CZ6 HAUS3 "HAUS augmin-like complex subunit 3" [Homo sapiens (taxid:9606)]

 Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 91/428 (21%), Positives = 176/428 (41%)

Query:    44 LKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGH---- 99
             LK  + S L  K   ++  K+L  L+ +   L    +  +Q RR +    ++V  H    
Sbjct:    81 LKTCKTSDL--KTPRLD-DKELEKLEDEVQTLLKLKNLKIQ-RRNKCQLMASVTSHKSLR 136

Query:   100 LTTLDDSLSARNLQ----MNAVLERISSTAQDLA--------LYHSGEAYSNFHPFL-LG 146
             L   ++  + +  Q    +NA++ +IS+  Q L          +         +P + L 
Sbjct:   137 LNAKEEEATKKLKQSQGILNAMITKISNELQALTDEVTQLMMFFRHSNLGQGTNPLVFLS 196

Query:   147 DPSCIKELNQWFAKQFDTGPCQVVAE----EGKSECSRASLDDASNIL-VRDVENSRHQR 201
               S  K L+Q   ++  T    +  +    +G  E   +S +D   +L ++      +Q 
Sbjct:   197 QFSLEKYLSQ---EEQSTAALTLYTKKQFFQGIHEVVESSNEDNFQLLDIQTPSICDNQE 253

Query:   202 VSE---LQWLRLMFGCIFYCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASD 258
             + E   L+  RL    I  C  H   H+    +S      K+  K    +L SL   A  
Sbjct:   254 ILEERRLEMARLQLAYI--CAQHQLIHLKASNSS-----MKSSIKWAEESLHSLTSKA-- 304

Query:   259 EAHIHLDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLK 318
                  +D+  L  K   L  E+  L     ++   ++PA+  E AQL +  +++GD+DL+
Sbjct:   305 -----VDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVVRENAQLLNMPVVKGDFDLQ 359

Query:   319 VMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESELQAA---A 375
             + ++++Y +RQ++ +  LI   A  + L ++ ++E +     Y  L+ +  EL  +    
Sbjct:   360 IAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLVQELSQSNMML 419

Query:   376 GKQEQGAVDDQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLK 435
              KQ +   D   +     R+ + +   +   L   +      +++   H +L  +   LK
Sbjct:   420 YKQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLEGENKKKELFLTHGNLEEVAEKLK 479

Query:   436 N--SLPQD 441
                SL QD
Sbjct:   480 QNISLVQD 487

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0051225 "spindle assembly" evidence=IMP

GO:0051297 "centrosome organization" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0070652 "HAUS complex" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

RGD|1591723 Haus3 "HAUS augmin-like complex, subunit 3" [Rattus norvegicus (taxid:10116)]

 Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 32/126 (25%), Positives = 72/126 (57%)

Query:   251 SLVDLASDEAHIHLDRHLLKKKHVEL-VGELSN--LYLTEK--KLLSETIPALCWELAQL 305
             S V  A +  H  L + ++ K++++  +  L++  + L E+   +   T+PAL  E AQL
Sbjct:   288 SSVKWAEENLH-RLTKEVVGKENLDAKISSLNSEIIKLEEQITHIKGRTLPALVKENAQL 346

Query:   306 QDTYILQGDYDLKVMRKEFYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLK 365
              +  +++GD+DL++ ++++Y +RQ++ +  LI   A  + + +A ++E +  +  Y  L+
Sbjct:   347 LNMPVVKGDFDLQISKQDYYTARQELVLNELIKQKASFELVQLAYEIELRKHWDTYRQLE 406

Query:   366 VIESEL 371
              +  +L
Sbjct:   407 SLVQQL 412

GO:0005813 "centrosome" evidence=ISO

GO:0051225 "spindle assembly" evidence=IEA;ISO

GO:0051297 "centrosome organization" evidence=ISO

GO:0070652 "HAUS complex" evidence=IEA;ISO

UNIPROTKB|F1NCU4 HAUS3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
 Identities = 58/279 (20%), Positives = 119/279 (42%)

Query:   269 LKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISR 328
             ++ K   L  E+S +     ++ +E +P+L  E AQL    ++  D D ++ +++ + S+
Sbjct:   314 VEAKISSLNDEISTIKQQIAQINNEDLPSLLKERAQLFTAPVVMADLDREIAQQDHFASK 373

Query:   329 QKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLK-VIESELQAAAGKQEQGAVDDQD 387
             Q    +HLI   A  + + +A  +E K     +  L+ +IES  Q++   Q++  V  + 
Sbjct:   374 QDEICSHLIRQKASFELIQLAYDIELKKHKDIHCQLENLIESLKQSSNEMQQRLEVLSKQ 433

Query:   388 TFLHGVRDLLSSHSNTQAGL----------STYVSAPRIVQQISSLHSDLMTLQSDLKNS 437
             T L   R+ +SS  +    L            + +   + Q    LH D +T Q  L  S
Sbjct:   434 TELAKPRNSISSKDDFSCRLYQLLEGENKKQVFKTYKNLEQMAQKLHQDCVTAQDQLAVS 493

Query:   438 LPQDIKCINELLQQL--LFPSSTTA--QLILAPCALMKELDGIEKINAKLSAAVEEATLE 493
               +    +++L   +  L  +      Q++L    L ++   +E    KL+  + +   +
Sbjct:   494 SQEQSLLLSKLDSDVNALHDALYCGGNQILLTSRELTEQFHQLEGDLNKLNQLIMDLIAD 553

Query:   494 HCKKSEIIKHHSQEVGLQRRVFVDFVCSPERLRSQVPEL 532
                K   +  +     ++R ++V F      L+  V +L
Sbjct:   554 VKSKRNFLASNKVHQ-MERNLYVYFFRDENHLKEMVEKL 591

GO:0051225 "spindle assembly" evidence=IEA

GO:0070652 "HAUS complex" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0051297 "centrosome organization" evidence=IEA

UNIPROTKB|F1PDJ8 HAUS3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
 Identities = 28/108 (25%), Positives = 60/108 (55%)

Query:   264 LDRHLLKKKHVELVGELSNLYLTEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKE 323
             LD+  L  K   L  E+  L      +  +++PA+  E AQL +  +++GD+DL++ +++
Sbjct:   305 LDKDNLDAKISTLNSEILKLEEQISHMKDKSLPAVIKENAQLLNMPVVKGDFDLQIAKQD 364

Query:   324 FYISRQKVFIAHLINHLARHQFLNIACQLEKKNLFGAYSLLKVIESEL 371
             +Y +RQ++ +  LI   A  + L ++ ++E +  +  +  L+ +  EL
Sbjct:   365 YYTARQELVLNQLIKQKASFELLQLSYEIELRKHWDIHRQLENLVQEL 412


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      542       514   0.00088  119 3  11 22  0.49    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  282 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  53.27u 0.15s 53.42t   Elapsed:  00:00:03
  Total cpu time:  53.28u 0.15s 53.43t   Elapsed:  00:00:03
  Start:  Tue May 21 01:10:53 2013   End:  Tue May 21 01:10:56 2013

GO:0051297 "centrosome organization" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0070652 "HAUS complex" evidence=IEA

GO:0051225 "spindle assembly" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	542
PF14932	256	HAUS-augmin3: HAUS augmin-like complex subunit 3	100.0
PF00038	312	Filament: Intermediate filament protein; InterPro:	83.21

>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3

Probab=100.00  E-value=3e-41  Score=338.08  Aligned_cols=205  Identities=27%  Similarity=0.312  Sum_probs=180.4

Q ss_pred             ChhhhhhhcccCccchHHHHhhcccccCCCCCCCCccchhhhhhhhHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 037552            1 YERFLEEEKLLEGEDLESAHDSISAFSSSRGNQDDIFGTEEVRLKAIRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHGS   80 (542)
Q Consensus         1 f~~L~~sGKiLeg~aLdeal~t~~~~~~~~~~~~~~~~~~e~~led~r~~~e~Le~E~~~Lqk~~~~~~~r~nkLq~~as   80 (542)
                      |++|+++||||||+|||+||++|++++++.+           +++|  .++++|++|+++|+++++++++++|+|+.+++
T Consensus        33 ~~~L~~~GkiLeg~~Ld~aL~~~~~~~~~~~-----------~~~e--~~le~Le~el~~l~~~~~~~~~~~~~lq~~~~   99 (256)
T PF14932_consen   33 FEELQKSGKILEGEALDEALKTISAFSPKLL-----------ELEE--EDLEALEEELEALQEYKELYEQLRNKLQQLDS   99 (256)
T ss_pred             HHHHHHcCCcCCHHHHHHHHHHcccccCCcc-----------ccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999988           5555  68899999999999999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhhchhhhhhhHHhhhhHHHHHHHHHHHHHHHHHHh----hccc--c------cccCChhhhccCc
Q 037552           81 TLVQGRRARVSATSTVNGHLTTLDDSLSARNLQMNAVLERISSTAQDLAL----YHSG--E------AYSNFHPFLLGDP  148 (542)
Q Consensus        81 ~l~~~~~~l~~~~~~~~~~lk~~~~~l~a~N~k~N~~L~~L~~~v~eL~~----~~s~--~------Sq~dL~~Yl~~Ee  148 (542)
                      +++|....+..+.+++..++++....+.+.|.++|+.|+.|++.|.++++    +|+|  +      ||+||++|+++|+
T Consensus       100 ~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~k~~~~l~~l~~~v~~l~~~~~~~~~~~~~~~~~flsq~~l~~Y~~~ee  179 (256)
T PF14932_consen  100 SLSQELSELEGKEEEAQKKLKKAQKELSAECSKLNNELNQLLGEVSKLASELAHAHSGQQQNPPVFLSQMPLEQYLSQEE  179 (256)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCchhhhCCHHHHHHHHH
Confidence            99999999999999999999999998887666666666655555555554    4445  2      9999999999999


Q ss_pred             hhHHHHHHHHHhhcccccccccccCCcccccccccccchh-hhccc-cchhhhhhhhHHHHHHHhhhhhhhhcccchhhh
Q 037552          149 SCIKELNQWFAKQFDTGPCQVVAEEGKSECSRASLDDASN-ILVRD-VENSRHQRVSELQWLRLMFGCIFYCRHHTFYHV  226 (542)
Q Consensus       149 ~~TkaL~~y~kKQFf~Gi~~lv~~E~s~~~~f~~L~D~~~-~~~~~-~e~~~~~r~~EL~RLq~~~~~~yicaq~qli~~  226 (542)
                      +||++|+.|||||||+||+++|  |+++.++|+ +.|+++ +.++| .+..++++. ||+|||++    ||||+||+|.+
T Consensus       180 ~~t~~L~~y~kKqF~~g~~~~~--e~s~~~~~~-lld~~~~~~~~d~~e~~~~~~~-EL~rLq~~----~~~aq~q~I~~  251 (256)
T PF14932_consen  180 QFTKYLTSYTKKQFFQGISELV--ESSNEDNFQ-LLDISNPSIRGDEEEVLEERRS-ELARLQSA----YICAQHQLIQA  251 (256)
T ss_pred             HHHHHHHHHHHHhcccccchhh--ccccchhhH-HhhccccccccchHHHHHHHHH-HHHHHHHH----HHHHHHHHHHH
Confidence            9999999999999999999999  999999999 888988 67744 455545555 99999999    99999999998

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope

Probab=83.21  E-value=40  Score=34.69  Aligned_cols=85  Identities=12%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhhhhhhhhhhhhhch---hhhhhhHHhhhhHHHHHHHHHHHHHH
Q 037552           49 VSTLAYKAEAVELQKQLRHLQSQFDVLTAHGSTLVQGRRARVSATSTVNGH---LTTLDDSLSARNLQMNAVLERISSTA  125 (542)
Q Consensus        49 ~~~e~Le~E~~~Lqk~~~~~~~r~nkLq~~as~l~~~~~~l~~~~~~~~~~---lk~~~~~l~a~N~k~N~~L~~L~~~v  125 (542)
                      .++..++..|..+.+.+..+.-.++.+..-+..+........+....+...   ++..-+.-......+.+-++.|.+..
T Consensus        54 ~el~~lr~~id~~~~eka~l~~e~~~l~~e~~~~r~k~e~e~~~~~~le~el~~lrk~ld~~~~~r~~le~~i~~L~eEl  133 (312)
T PF00038_consen   54 EELRELRRQIDDLSKEKARLELEIDNLKEELEDLRRKYEEELAERKDLEEELESLRKDLDEETLARVDLENQIQSLKEEL  133 (312)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHhHHhhhhHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHhHHHHHHHHHHHHH
Confidence            356677777777777777777777777777766655544333333333332   33333344555666777777777766


Q ss_pred             HHHHhhcc
Q 037552          126 QDLALYHS  133 (542)
Q Consensus       126 ~eL~~~~s  133 (542)
                      .-+-..|.
T Consensus       134 ~fl~~~he  141 (312)
T PF00038_consen  134 EFLKQNHE  141 (312)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhhhh
Confidence            66655555

They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	542
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 59/414 (14%), Positives = 117/414 (28%), Gaps = 126/414 (30%)

Query: 43  RLKAIRVSTLAYKAEAVELQKQ---------LRHLQSQ-----FDVLTAHGSTLVQGRRA 88
               I++   + +AE   L K          L ++Q+      F++       L+  R  
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL---SCKILLTTRFK 275

Query: 89  RV--SATSTVNGHLT--------TLDDSLS--ARNLQMNAVLERISSTAQDLALYHSGEA 136
           +V    ++    H++        T D+  S   + L             QDL      E 
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP---------QDLPR----EV 322

Query: 137 YSNFHPFLLGDPSCIKEL-----NQWFAKQFDTGPCQVVAEEGKSECSRASLDDASNILV 191
            +  +P  L   S I E        W    +       V  +  +    +SL+       
Sbjct: 323 LTT-NPRRL---SIIAESIRDGLATW--DNWKH-----VNCDKLTTIIESSLNVLEPAEY 371

Query: 192 RDV--------ENSR-HQRVSELQWL--------RLMFGCIFYC--------RHHTFYHV 226
           R +         ++     +  L W          ++     Y            +   +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 227 FFRYTSTFRPLF----KNVTKTMLRALFSLVDLASDEA----HIHLDRHLLKKKHVELVG 278
           +          +      V    +   F   DL         + H+  HL   +H E + 
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 279 ELSNLYL----TEKKLLSETIPALCWELAQLQDTYILQGDYDLKVMRKEFYISRQ----- 329
               ++L     E+K+  ++          + +T  LQ    LK  +   YI        
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTA--WNASGSILNT--LQ---QLKFYKP--YICDNDPKYE 542

Query: 330 ------KVFIAHLINHLARHQFLNI---ACQLEKKNLFGAYSLLKVIESELQAA 374
                   F+  +  +L   ++ ++   A   E + +F         E+  Q  
Sbjct: 543 RLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF--------EEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 3e-07
 Identities = 90/594 (15%), Positives = 172/594 (28%), Gaps = 191/594 (32%)

Query: 1   YERFLEE----------EKLLEGEDLESAHDSISAFSSSRG---NQDDIFGTEEV-RLKA 46
            ++F+EE            +   E  + +  +   +   R    N + +F    V RL+ 
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKT-EQRQPSMMTRM-YIEQRDRLYNDNQVFAKYNVSRLQP 136

Query: 47  IRVSTLAYKAEAVELQKQLRHLQSQFDVLTAHG------STLVQGRRARVSATSTVNGHL 100
                        +L++ L  L+   +V    G      + +       V  +  V    
Sbjct: 137 YL-----------KLRQALLELRPAKNV-LIDGVLGSGKTWVA----LDVCLSYKV---Q 177

Query: 101 TTLDDS---LSARNLQ-MNAVLERISSTAQDLALYHSGEAYSNFHPFLLGDPSCIKELNQ 156
             +D     L+ +N      VLE +    Q L LY     +++           I  +  
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEML----QKL-LYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 157 WFAKQFDTGPCQVVAEEGKSECSRASLDDASNILVRDVENSRHQRVSELQWLRLMFGCIF 216
              +              KS+     L     +L  +V+N++        W      C  
Sbjct: 233 ELRRLL------------KSKPYENCLL----VL-LNVQNAKA-------WNAFNLSC-- 266

Query: 217 YCRHHTFYHVFFRYTSTFRPLFKNVTKTMLRALFSLVDLASDEAHIHLDRHLLKKKHVEL 276
                             + L   +T T  + +   +  A+   HI LD H +     E+
Sbjct: 267 ------------------KIL---LT-TRFKQVTDFLS-AATTTHISLDHHSMTLTPDEV 303

Query: 277 VGELSN-LYLTEKKLLSE---TIP---ALCWELAQLQDTYILQGDYDLKVMRKEFYISRQ 329
              L   L    + L  E   T P   ++  E   ++D  +   D    V   +   +  
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--IRD-GLATWDNWKHVNCDKL-TTII 359

Query: 330 KVFIAHLINHLARHQFLNIACQLEKKNLFGA-----YSLLKVIESELQAAAGKQEQGAVD 384
           +  +  L     R  F  ++       +F         LL +I  ++     K +   V 
Sbjct: 360 ESSLNVLEPAEYRKMFDRLS-------VFPPSAHIPTILLSLIWFDVI----KSDVMVVV 408

Query: 385 DQDTFLHGVRDLLSSHSNTQAGLSTYVSAPRIVQQISSLHSDLMTLQSDLKNSLPQDIKC 444
           ++   LH    L+          ST            S+ S    +  +LK  L  +   
Sbjct: 409 NK---LHK-YSLVEKQPKE----STI-----------SIPS----IYLELKVKLENEYAL 445

Query: 445 INELLQQLLFPSSTTAQLILAPCALMKELDG-IEKINAKLSAAVEEATLEHCKKSEIIKH 503
              ++     P +  +  ++ P      LD                    H      I H
Sbjct: 446 HRSIVDHYNIPKTFDSDDLIPPY-----LDQYF---------------YSH------IGH 479

Query: 504 H------SQEVGLQRRVFVDF---------VCSPERLRSQVPELTARVRGFKAF 542
           H       + + L R VF+DF           +       +     +++ +K +
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00