Citrus Sinensis ID: 037637

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHINEGIKF
Secondary Structure (PSIPRED)
cccccccEEEEEccHHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEEcHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLaagfikdhhLRSSIALVAAILSMVMLGIAGAalgkvptmrsCVRVVVGGFVavpirwgkvkiiENRLHINEGIKF
Flexible Loop (DISEMBL)
mriatsvlvsvhtqvdtinfqaerdfKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGfvavpirwgkvkiienrlhinegikf
Low Complexity Region (SEG)
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCvrvvvggfvavPIRWGKVKIIENRLHINEGIKF
Disordered region (IsUnstruct)
*****SVLVSVHTQVDTINFQAERDFK****VDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHIN*****
Disordered Region (DISOPRED)
MRIATSVLVSVHTQVDTINFQA*****************SAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHINEGIK*
Disordered Region (DISEMBL)
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHINEGIKF
Disordered Region (DISPRO)
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHINEGIKF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKIIENRLHINEGIKF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
Q9M2C0	198	Vacuolar iron transporter	yes	no	0.875	0.601	0.377	2e-16
Q9M2C3	200	Vacuolar iron transporter	no	no	0.919	0.625	0.382	6e-13
Q9LPU9	200	Vacuolar iron transporter	no	no	0.875	0.595	0.377	2e-12
Q9SRD3	196	Vacuolar iron transporter	no	no	0.860	0.596	0.398	4e-12
P16313	206	Nodulin-21 OS=Glycine max	no	no	0.705	0.466	0.330	1e-08
Q7XTL7	208	Vacuolar iron transporter	yes	no	0.889	0.581	0.382	1e-07
Q9LSF6	219	Vacuolar iron transporter	no	no	0.852	0.529	0.335	4e-06
Q6H658	232	Vacuolar iron transporter	no	no	0.889	0.521	0.333	0.0001

>sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana GN=At3g43660 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
           +A    +SV++Q D    Q +R+   E    ++  +PS  Q A+AS+LAF     VP+LA
Sbjct: 75  MAIGEFISVYSQYDIEVAQMKRESGGET---KKEKLPSPTQAAIASALAFTLGAIVPLLA 131

Query: 63  AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK 122
           A F+K++ +R  + + A  L++VM G  GA LGK P ++S VRV++GG++A+ I +G  K
Sbjct: 132 AAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTK 191

Query: 123 II 124
           ++
Sbjct: 192 LV 193

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M2C3|VITH3_ARATH Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana GN=At3g43630 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
           +A    VSV++Q D    Q +R+   E    ++  +PS  Q A AS+LAF     VP+LA
Sbjct: 74  MAIGEFVSVYSQYDIEVAQMKRETGGEI---EKEKLPSPTQAAAASALAFSLGAMVPLLA 130

Query: 63  AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK 122
           A F+K++ +R    + A  L++VM G  GA LGK P ++S +RV+VGG++A+ I +G  K
Sbjct: 131 AAFVKEYKVRIGAIVAAVTLALVMFGWLGAVLGKAPVVKSSLRVLVGGWLAMAITYGFTK 190

Query: 123 IIENRLHI 130
           +I +  H+
Sbjct: 191 LIGSHSHM 198

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPU9|VITH1_ARATH Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana GN=At1g21140 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
           +A    VSV++Q D    Q +R+   +    ++  +PS +Q A AS+LAF     VP++A
Sbjct: 77  MAIGEFVSVYSQYDIEVAQMKRENGGQV---EKEKLPSPMQAAAASALAFSLGAIVPLMA 133

Query: 63  AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK 122
           A F+KD+H+R    + A  L++VM G  GA LGK P  +S  RV++GG++A+ + +G  K
Sbjct: 134 AAFVKDYHVRIGAIVAAVTLALVMFGWLGAVLGKAPVFKSSARVLIGGWLAMAVTFGLTK 193

Query: 123 II 124
           +I
Sbjct: 194 LI 195

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD3|VITH2_ARATH Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana GN=At1g76800 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVD-QRTAVPSAIQIAVASSLAFLFWGKVPML 61
           +A    VSV++Q D    Q ERD     SV+ ++  +PS +Q A AS+LAF     VP+L
Sbjct: 74  MAIGEFVSVYSQYDIEVAQMERD-----SVEIEKEKLPSPMQAAAASALAFSAGAIVPLL 128

Query: 62  AAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKV 121
           AA F+K++ +R    +VA  +++++ G  GAALGK P +RS  RV+ GG++A+ + +G  
Sbjct: 129 AAAFVKEYKMRIISVVVAVTVALMVFGWLGAALGKAPAVRSSARVLFGGWLAMAVTFGLT 188

Query: 122 KII 124
           K+I
Sbjct: 189 KLI 191

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|P16313|NO21_SOYBN Nodulin-21 OS=Glycine max PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKM----ERSVD---QRTAVPSAIQIAVASSLAFLFW 55
           +A    V+V+TQ +    Q +RD  M    ER ++   +R  +P+ +Q  +AS+L F   
Sbjct: 103 MAIGEFVAVYTQYEVEVGQMKRDMNMSVGGERDLEMEMERRTLPNPLQATLASALCFSIG 162

Query: 56  GKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVP 98
             VP+L+A FI+++  R  + +  + L++V+ G  GA LGK P
Sbjct: 163 ALVPLLSAAFIENYRTRIIVVVAMSCLALVVFGWVGAKLGKTP 205

May play an important role in symbiotic nitrogen fixation.

Glycine max (taxid: 3847)

>sp|Q7XTL7|VITH5_ORYSJ Vacuolar iron transporter homolog 5 OS=Oryza sativa subsp. japonica GN=Os04g0686800 PE=2 SV=3

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
           +A    VSV +Q D    Q ERD K  R  ++  A+PS  Q A AS++AF     VP+LA
Sbjct: 84  MAIGEFVSVCSQRDVELAQLERDGK--RGGEEEKALPSPAQAAAASAMAFSVGAVVPLLA 141

Query: 63  AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK 122
           AGFI ++ LR ++ +  A +++   G  GA LG+    RS  RVV+GG+ A+ I +G ++
Sbjct: 142 AGFIVNYRLRIAVVVAVASVALAAFGCVGAVLGRAAVARSSARVVLGGWAAMGITFGLMR 201

Query: 123 IIE 125
           + +
Sbjct: 202 LFK 204

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LSF6|VTH21_ARATH Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana GN=At3g25190 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 21/137 (15%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAV---------------PSAIQIAVA 47
           +A    VSV TQ D    Q      M+R+++ +T++               P+  Q A+A
Sbjct: 82  MAIGEFVSVCTQRDIETAQ------MKRAIEHKTSLSAIDEQEEEEKKERLPNPGQAAIA 135

Query: 48  SSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVV 107
           S+LAF     +P+L A FI++H +R  +  V A +++V+ G+ GA LGK   ++S VRVV
Sbjct: 136 SALAFSVGAAMPLLGAVFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVV 195

Query: 108 VGGFVAVPIRWGKVKII 124
           +GG++A+ + +G  K I
Sbjct: 196 IGGWMAMALTFGLTKFI 212

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6H658|VITH1_ORYSJ Vacuolar iron transporter homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0644200 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 3   IATSVLVSVHTQVDTINFQAER--DFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPM 60
           +A    VSV+ Q D    Q ER    K     ++   +PS    AVAS+L+F     +P+
Sbjct: 104 MAIGEFVSVYAQCDIQAAQIERARGGKDADGGEEEEELPSPTMAAVASALSFAAGAALPL 163

Query: 61  LAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGK 120
           LA GF++    R +    A+ L +   G+A A LG     RS VR++VGG++A+ + +G 
Sbjct: 164 LAGGFVRPWAARVAAVCAASSLGLAGFGVASAYLGGAGVARSGVRMLVGGWLAMAVTYGV 223

Query: 121 VKI 123
           +K+
Sbjct: 224 LKL 226

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
357443695	217	Nodulin-like protein [Medicago truncatul	0.889	0.557	0.411	3e-15
15229736	198	vacuolar iron transporter-like protein [	0.875	0.601	0.377	1e-14
147779495	224	hypothetical protein VITISV_032099 [Viti	0.897	0.544	0.354	6e-14
225447854	224	PREDICTED: vacuolar iron transporter hom	0.897	0.544	0.354	6e-14
296081521	269	unnamed protein product [Vitis vinifera]	0.897	0.453	0.354	6e-14
356576049	219	PREDICTED: vacuolar iron transporter hom	0.897	0.557	0.409	8e-14
449443796	217	PREDICTED: vacuolar iron transporter hom	0.897	0.562	0.395	8e-14
449444935	196	PREDICTED: vacuolar iron transporter hom	0.919	0.637	0.340	1e-13
255579330	220	Nodulin, putative [Ricinus communis] gi|	0.897	0.554	0.392	2e-13
356510711	229	PREDICTED: vacuolar iron transporter hom	0.897	0.532	0.409	1e-12

>gi|357443695|ref|XP_003592125.1| Nodulin-like protein [Medicago truncatula] gi|355481173|gb|AES62376.1| Nodulin-like protein [Medicago truncatula]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 83/124 (66%), Gaps = 3/124 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMER--SVDQRTAVPSAIQIAVASSLAFLFWGKVPM 60
           +A    VSV++Q+D    Q +RD  +ER  +++++ ++P+ +Q A AS+LAF     VP+
Sbjct: 90  MAIGEFVSVYSQLDIEIAQLKRD-NIERGNNIEEKESLPNPLQAAAASALAFSIGAMVPL 148

Query: 61  LAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGK 120
           LAA FIKD+ +R  + L A   ++V+ G  GA LGK P +RSC+RV++GG++A+ I +G 
Sbjct: 149 LAASFIKDYKVRVGVVLGAVSFALVVFGWLGAVLGKAPVLRSCLRVLLGGWIAMAITFGL 208

Query: 121 VKII 124
            K+I
Sbjct: 209 TKLI 212

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229736|ref|NP_189952.1| vacuolar iron transporter-like protein [Arabidopsis thaliana] gi|75182792|sp|Q9M2C0.1|VITH4_ARATH RecName: Full=Vacuolar iron transporter homolog 4; AltName: Full=Protein NODULIN-LIKE 4 gi|7362791|emb|CAB83067.1| nodulin-like protein [Arabidopsis thaliana] gi|34365643|gb|AAQ65133.1| At3g43660 [Arabidopsis thaliana] gi|51970300|dbj|BAD43842.1| nodulin - like protein [Arabidopsis thaliana] gi|332644295|gb|AEE77816.1| vacuolar iron transporter-like protein [Arabidopsis thaliana]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
           +A    +SV++Q D    Q +R+   E    ++  +PS  Q A+AS+LAF     VP+LA
Sbjct: 75  MAIGEFISVYSQYDIEVAQMKRESGGET---KKEKLPSPTQAAIASALAFTLGAIVPLLA 131

Query: 63  AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK 122
           A F+K++ +R  + + A  L++VM G  GA LGK P ++S VRV++GG++A+ I +G  K
Sbjct: 132 AAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTK 191

Query: 123 II 124
           ++
Sbjct: 192 LV 193

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779495|emb|CAN65436.1| hypothetical protein VITISV_032099 [Vitis vinifera]

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 5/127 (3%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTA-----VPSAIQIAVASSLAFLFWGK 57
           +A    VSV+TQ+D    Q +RD +   S +         +P+  Q  +AS+L+F     
Sbjct: 93  MAIGEFVSVYTQLDIELAQMKRDKRRRDSTENEEKTENEKLPNPFQAGIASALSFALGAM 152

Query: 58  VPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIR 117
           +P+LAA FI++H +R  + + A+ L+++  G  GA LG+ P  RSC RV+VGG++A+ I 
Sbjct: 153 IPLLAAAFIREHKVRLGVVVAASSLALLAFGGLGAVLGRTPVGRSCARVLVGGWMAMAIT 212

Query: 118 WGKVKII 124
           +G  ++I
Sbjct: 213 FGLTRLI 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447854|ref|XP_002268564.1| PREDICTED: vacuolar iron transporter homolog 4-like [Vitis vinifera]

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 5/127 (3%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTA-----VPSAIQIAVASSLAFLFWGK 57
           +A    VSV+TQ+D    Q +RD +   S +         +P+  Q  +AS+L+F     
Sbjct: 93  MAIGEFVSVYTQLDIELAQMKRDKRRRDSTENEEKTENEKLPNPFQAGIASALSFALGAM 152

Query: 58  VPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIR 117
           +P+LAA FI++H +R  + + A+ L+++  G  GA LG+ P  RSC RV+VGG++A+ I 
Sbjct: 153 IPLLAAAFIREHKVRLGVVVAASSLALLAFGGLGAVLGRTPVGRSCARVLVGGWMAMAIT 212

Query: 118 WGKVKII 124
           +G  ++I
Sbjct: 213 FGLTRLI 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081521|emb|CBI20044.3| unnamed protein product [Vitis vinifera]

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 5/127 (3%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTA-----VPSAIQIAVASSLAFLFWGK 57
           +A    VSV+TQ+D    Q +RD +   S +         +P+  Q  +AS+L+F     
Sbjct: 138 MAIGEFVSVYTQLDIELAQMKRDKRRRDSTENEEKTENEKLPNPFQAGIASALSFALGAM 197

Query: 58  VPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIR 117
           +P+LAA FI++H +R  + + A+ L+++  G  GA LG+ P  RSC RV+VGG++A+ I 
Sbjct: 198 IPLLAAAFIREHKVRLGVVVAASSLALLAFGGLGAVLGRTPVGRSCARVLVGGWMAMAIT 257

Query: 118 WGKVKII 124
           +G  ++I
Sbjct: 258 FGLTRLI 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576049|ref|XP_003556147.1| PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max]

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 78/127 (61%), Gaps = 5/127 (3%)

Query: 3   IATSVLVSVHTQVD----TINFQAERD-FKMERSVDQRTAVPSAIQIAVASSLAFLFWGK 57
           +A    VSV++Q+D     +  + ERD    E    ++  +P+ I  A AS+LAF     
Sbjct: 88  MAIGEFVSVYSQLDIEVAQMKREKERDNIDQEEDGYEKEKLPNPIHAAAASALAFSVGAL 147

Query: 58  VPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIR 117
           VP+LAA FI+D+ +R  + L A  L++V+ G  GA LGK PT RSCVRV++GG++A+ I 
Sbjct: 148 VPLLAASFIRDYKVRLGVILGAVSLALVVFGWLGAVLGKAPTFRSCVRVLLGGWLAMAIT 207

Query: 118 WGKVKII 124
           +G  K+I
Sbjct: 208 FGLTKLI 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443796|ref|XP_004139663.1| PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus] gi|449525553|ref|XP_004169781.1| PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus]

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 2/124 (1%)

Query: 3   IATSVLVSVHTQVD--TINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPM 60
           +A    VSV++Q+D      +  RD + E   ++   +P+ +Q AVAS+LAF     VP+
Sbjct: 89  MAIGEFVSVYSQLDIEMAQIKRSRDHRKELEEEETAKLPNPLQAAVASALAFSTGAIVPL 148

Query: 61  LAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGK 120
           LAA FI+++ +R  + +VA  +++V  G  GAALGK PT+RS VRV++GG+ A+ + +G 
Sbjct: 149 LAAAFIREYRVRLGVVVVAVTVTLVGFGWLGAALGKAPTVRSVVRVLIGGWAAMAVTFGL 208

Query: 121 VKII 124
            K+I
Sbjct: 209 TKLI 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444935|ref|XP_004140229.1| PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus]

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 79/132 (59%), Gaps = 7/132 (5%)

Query: 3   IATSVLVSVHTQVDTINFQAERDFKMERSV-------DQRTAVPSAIQIAVASSLAFLFW 55
           +A    VSV+TQ D    Q +R+ K + +        ++   +P+ +Q A+AS++AF   
Sbjct: 63  MAIGEFVSVYTQYDIEKAQLKRNGKEKNNNMEPNHPGEEEEKLPNPLQAALASAIAFSVG 122

Query: 56  GKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVP 115
             +P++AA FI+DH +R  +    A L++++ GI GA LG+ P  +S  RVVVGG++A+ 
Sbjct: 123 AVIPLVAAVFIRDHKVRLGVVAAVASLTLLVFGIVGAILGRTPVGKSAARVVVGGWMAMA 182

Query: 116 IRWGKVKIIENR 127
           I +G  K++ ++
Sbjct: 183 ITFGLTKLLGSK 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579330|ref|XP_002530510.1| Nodulin, putative [Ricinus communis] gi|223529967|gb|EEF31894.1| Nodulin, putative [Ricinus communis]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 3   IATSVLVSVHTQVDTINFQAERD---FKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVP 59
           +A    VSV++Q+D    Q +RD    + E     + ++P+ +Q AVAS+LAF     VP
Sbjct: 91  MAIGEFVSVYSQLDIELAQEKRDHGNEEEEEEEGDKESLPNPLQAAVASALAFSMGAIVP 150

Query: 60  MLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWG 119
           +LAA FI ++  R    + A  L++V+ G  GA LGK P +RS  RV+VGG +A+ I +G
Sbjct: 151 LLAASFISNYKARLGAVVGAVSLALVIFGWVGAVLGKAPVVRSSARVLVGGLIAIAITFG 210

Query: 120 KVKII 124
             K+I
Sbjct: 211 LTKLI 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510711|ref|XP_003524079.1| PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 5/127 (3%)

Query: 3   IATSVLVSVHTQVD--TINFQAERDFKMERSVDQ---RTAVPSAIQIAVASSLAFLFWGK 57
           +A    VSV+TQ D      + ER+    R V++   R  +P+    A+AS+LAF     
Sbjct: 98  MAIGEFVSVYTQYDIEKTQLKREREADNNRGVNEEARREKLPNPFHAALASALAFSVGAL 157

Query: 58  VPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIR 117
           VPMLAA FI+ H +R  +   A  L++++ G AGA LGK P  RSC+RV+VGG++A+ I 
Sbjct: 158 VPMLAAVFIRSHKVRMGVVAAAVSLALLVFGGAGAVLGKTPVTRSCIRVLVGGWMAMAIT 217

Query: 118 WGKVKII 124
           +G  K+I
Sbjct: 218 FGLTKLI 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
TAIR|locus:2199572	200	AT1G21140 "AT1G21140" [Arabido	0.867	0.59	0.357	7.1e-13
TAIR|locus:2030091	196	AT1G76800 "AT1G76800" [Arabido	0.860	0.596	0.357	9.1e-13
TAIR|locus:2080193	200	AT3G43630 "AT3G43630" [Arabido	0.911	0.62	0.356	1.2e-12
TAIR|locus:2080213	198	AT3G43660 "AT3G43660" [Arabido	0.875	0.601	0.327	2.4e-12
TAIR|locus:2090305	219	AT3G25190 "AT3G25190" [Arabido	0.897	0.557	0.290	1.8e-09

TAIR|locus:2199572 AT1G21140 "AT1G21140" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 44/123 (35%), Positives = 67/123 (54%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    VSV++Q D    Q +R+        ++  +PS +Q A AS+LAF     VP++A
Sbjct:    77 MAIGEFVSVYSQYDIEVAQMKRE---NGGQVEKEKLPSPMQAAAASALAFSLGAIVPLMA 133

Query:    63 AGFIKDHHLRSSIALVAAI-LSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             A F+KD+H+R   A+VAA+ L++VM G  GA LGK P  +S             + +G  
Sbjct:   134 AAFVKDYHVRIG-AIVAAVTLALVMFGWLGAVLGKAPVFKSSARVLIGGWLAMAVTFGLT 192

Query:   122 KII 124
             K+I
Sbjct:   193 KLI 195

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

TAIR|locus:2030091 AT1G76800 "AT1G76800" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 44/123 (35%), Positives = 68/123 (55%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVD-QRTAVPSAIQIAVASSLAFLFWGKVPML 61
             +A    VSV++Q D    Q ERD     SV+ ++  +PS +Q A AS+LAF     VP+L
Sbjct:    74 MAIGEFVSVYSQYDIEVAQMERD-----SVEIEKEKLPSPMQAAAASALAFSAGAIVPLL 128

Query:    62 AAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             AA F+K++ +R    +VA  +++++ G  GAALGK P +RS             + +G  
Sbjct:   129 AAAFVKEYKMRIISVVVAVTVALMVFGWLGAALGKAPAVRSSARVLFGGWLAMAVTFGLT 188

Query:   122 KII 124
             K+I
Sbjct:   189 KLI 191

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

TAIR|locus:2080193 AT3G43630 "AT3G43630" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 46/129 (35%), Positives = 70/129 (54%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    VSV++Q D    Q +R+   E    ++  +PS  Q A AS+LAF     VP+LA
Sbjct:    74 MAIGEFVSVYSQYDIEVAQMKRETGGEI---EKEKLPSPTQAAAASALAFSLGAMVPLLA 130

Query:    63 AGFIKDHHLRSSIALVAAI-LSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             A F+K++ +R   A+VAA+ L++VM G  GA LGK P ++S             I +G  
Sbjct:   131 AAFVKEYKVRIG-AIVAAVTLALVMFGWLGAVLGKAPVVKSSLRVLVGGWLAMAITYGFT 189

Query:   122 KIIENRLHI 130
             K+I +  H+
Sbjct:   190 KLIGSHSHM 198

GO:0008150 "biological_process" evidence=ND

GO:0010039 "response to iron ion" evidence=IEP

TAIR|locus:2080213 AT3G43660 "AT3G43660" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 40/122 (32%), Positives = 65/122 (53%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    +SV++Q D    Q +R+   E   ++   +PS  Q A+AS+LAF     VP+LA
Sbjct:    75 MAIGEFISVYSQYDIEVAQMKRESGGETKKEK---LPSPTQAAIASALAFTLGAIVPLLA 131

Query:    63 AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKVK 122
             A F+K++ +R  + + A  L++VM G  GA LGK P ++S             I +G  K
Sbjct:   132 AAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTK 191

Query:   123 II 124
             ++
Sbjct:   192 LV 193

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090305 AT3G25190 "AT3G25190" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 38/131 (29%), Positives = 65/131 (49%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSV---------DQRTAVPSAIQIAVASSLAFL 53
             +A    VSV TQ D    Q +R  + + S+         +++  +P+  Q A+AS+LAF 
Sbjct:    82 MAIGEFVSVCTQRDIETAQMKRAIEHKTSLSAIDEQEEEEKKERLPNPGQAAIASALAFS 141

Query:    54 FWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXX 113
                 +P+L A FI++H +R  +  V A +++V+ G+ GA LGK   ++S           
Sbjct:   142 VGAAMPLLGAVFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVVIGGWMA 201

Query:   114 XPIRWGKVKII 124
               + +G  K I
Sbjct:   202 MALTFGLTKFI 212


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      136       125   0.00091  102 3  11 22  0.42    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  540 (57 KB)
  Total size of DFA:  106 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.04u 0.13s 10.17t   Elapsed:  00:00:00
  Total cpu time:  10.04u 0.13s 10.17t   Elapsed:  00:00:00
  Start:  Thu May  9 16:15:47 2013   End:  Thu May  9 16:15:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT3G43660	nodulin, putative; nodulin, putative; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- sperm cell; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF125, transmembrane (InterPro-IPR008217); BEST Arabidopsis thaliana protein match is- nodulin, putative (TAIR-AT3G43630.1); Has 1038 Blast hits to 1034 proteins in 345 species- Archae - 39; Bacteria - 639; Metazoa - 0; Fungi - 57; Plants - 101; Viruses - 0; Other Eukaryotes - 202 (source- NCBI BLink). (198 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G64870	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (479 aa)							•		0.463

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	136
cd02432	218	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-re	3e-08
pfam01988	209	pfam01988, VIT1, VIT family	3e-07
COG1814	229	COG1814, COG1814, Uncharacterized membrane protein	1e-04
cd02436	152	cd02436, Nodulin-21, Nodulin-21	7e-04

>gnl|CDD|153123 cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 45/150 (30%)

Query: 9   VSVHTQVDT-------------INFQAER----DFKMERSVDQRTAVPSAIQI------- 44
           VSV +Q DT              + +AE     D   ER +    A   A ++       
Sbjct: 60  VSVSSQRDTEKADIAKERRELAEDPEAELEELADIYEERGLSPELARQVADELMAKDALE 119

Query: 45  --------------------AVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSM 84
                               A+AS+++F     +P+LA         +  + ++A +L++
Sbjct: 120 AHARDELGITEGEYANPWQAALASAISFSVGALLPLLAILLAP-AAWKVPVTIIATLLAL 178

Query: 85  VMLGIAGAALGKVPTMRSCVRVVVGGFVAV 114
            + G   A LG    +R+ +R V+ G +A+
Sbjct: 179 ALTGYVSARLGGASVLRAILRNVIWGALAM 208

Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. . Length = 218

>gnl|CDD|216831 pfam01988, VIT1, VIT family

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 39  PSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVP 98
            S ++ A+AS L+F+  G +P+L         L  SIA+    L   +LG   A L    
Sbjct: 127 ASPLKAALASGLSFILGGLIPLLPYLLAPPSALIVSIAVTLLAL--FLLGYVKARLSGRS 184

Query: 99  TMRSCVRVVVGGFVA 113
            +RS +R+VV G +A
Sbjct: 185 PLRSALRMVVIGLLA 199

This family includes the vacuolar Fe2+/Mn2+ uptake transporter, Ccc1 and the vacuolar iron transporter VIT1. Length = 209

>gnl|CDD|224727 COG1814, COG1814, Uncharacterized membrane protein [Function unknown]

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 17/68 (25%), Positives = 37/68 (54%)

Query: 46  VASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVR 105
           ++S ++F+    +P+L   F+ D       +++ A+L++ +LG   A L      +S +R
Sbjct: 147 LSSGISFIIGALLPLLPFFFLPDVLSALIASIILALLALAILGAVLARLSGASIAKSILR 206

Query: 106 VVVGGFVA 113
           +V+ G +A
Sbjct: 207 MVLLGLLA 214

Length = 229

>gnl|CDD|153127 cd02436, Nodulin-21, Nodulin-21

 Score = 37.2 bits (86), Expect = 7e-04
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 23  ERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAIL 82
             D + E     R   PS    A AS+L+F      P+LAA F+  +  R  +    +  
Sbjct: 80  APDSEPEGL---RRQAPSPSSAATASALSFAAGALFPLLAAWFVASYASR-RVLPPQSSA 135

Query: 83  SMVMLGIAGAALGKVP 98
                G + A +    
Sbjct: 136 PAAPPGRSPATVTASS 151

Nodulin-21: This is a family of proteins that may be unique to certain plants. The family member in soybean is found to be nodule-specific and is abundant during nodule development. The proteins of this family thus may play a role in symbiotic nitrogen fixation. . Length = 152

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
cd02432	218	Nodulin-21_like_1 Nodulin-21 and CCC1-related prot	100.0
cd02433	234	Nodulin-21_like_2 Nodulin-21 and CCC1-related prot	100.0
cd02434	225	Nodulin-21_like_3 Nodulin-21 and CCC1-related prot	100.0
cd02435	241	CCC1 CCC1. CCC1: This domain is present in the CCC	100.0
KOG4473	247	consensus Uncharacterized membrane protein [Functi	100.0
PF01988	213	VIT1: VIT family; InterPro: IPR008217 Proteins con	100.0
cd02431	149	Ferritin_CCC1_C CCC1-related domain of ferritin. F	99.97
TIGR00267	169	conserved hypothetical protein TIGR00267. This fam	99.96
cd02437	175	CCC1_like_1 CCC1-related protein family. CCC1_like	99.95
cd02436	152	Nodulin-21 Nodulin-21. Nodulin-21: This is a famil	99.95
cd01059	143	CCC1_like CCC1-related family of proteins. CCC1_li	99.92
COG1814	229	Uncharacterized membrane protein [Function unknown	99.9
cd02437	175	CCC1_like_1 CCC1-related protein family. CCC1_like	88.94
PF08006	181	DUF1700: Protein of unknown function (DUF1700); In	87.12

>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=4.9e-38  Score=247.28  Aligned_cols=123  Identities=21%  Similarity=0.297  Sum_probs=115.0

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhh--------------------------------------------cCCCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMER--------------------------------------------SVDQRT   36 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~--------------------------------------------lGi~~~   36 (136)
                      +|||+|||+|+|||||.++++++||+||++                                            +|++++
T Consensus        52 ~SMa~G~yls~~sq~d~~~~~~~~e~~~i~~~p~~e~~el~~~~~~~G~~~~~a~~~a~~l~~~~~~~~~~~~e~g~~~~  131 (218)
T cd02432          52 LSMAAGEYVSVSSQRDTEKADIAKERRELAEDPEAELEELADIYEERGLSPELARQVADELMAKDALEAHARDELGITEG  131 (218)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcChHHHHHHHhcCCCCC
Confidence            699999999999999999999999998652                                            677777


Q ss_pred             CcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHH
Q 037637           37 AVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPI  116 (136)
Q Consensus        37 ~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~v  116 (136)
                      +.+|||++|++||+||++|+++|++||+|. +...+++.+++++.++|+++|+++++++++|++|+++||+++|++|+++
T Consensus       132 ~~~~p~~aal~s~~sf~lg~liPllpy~~~-~~~~~~~~s~~~~~~aL~~~G~~~a~~~~~~~~~~~l~~~~iG~~aa~v  210 (218)
T cd02432         132 EYANPWQAALASAISFSVGALLPLLAILLA-PAAWKVPVTIIATLLALALTGYVSARLGGASVLRAILRNVIWGALAMAL  210 (218)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence            778999999999999999999999999987 5567799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh
Q 037637          117 RWGKVKII  124 (136)
Q Consensus       117 ty~iG~l~  124 (136)
                      ||++|+++
T Consensus       211 ty~iG~l~  218 (218)
T cd02432         211 TYLIGRLF  218 (218)
T ss_pred             HHHHHhhC
Confidence            99999875

Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=1e-37  Score=247.74  Aligned_cols=125  Identities=17%  Similarity=0.102  Sum_probs=116.7

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhh----------------------------------------------cCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMER----------------------------------------------SVDQ   34 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~----------------------------------------------lGi~   34 (136)
                      +|||+|||+|+|||+|.++++++||+||++                                              +|++
T Consensus        64 ~SMa~GeYls~kse~d~~~~~~~re~~~i~~~p~~e~~el~~iy~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~e~g~~  143 (234)
T cd02433          64 LSMAAGEYVSVTSQRELLEASIPDERRELRKHPLEEAAELALIYRAKGLDEEEAKRVASQLMNDPEQALDTLAREELGLD  143 (234)
T ss_pred             HHHHhhhhhhhhhHHHHHHHHHHHHHHHhhhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCcchhHHHHHHHhcCCC
Confidence            699999999999999999999999998652                                              7788


Q ss_pred             CCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHH
Q 037637           35 RTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAV  114 (136)
Q Consensus        35 ~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa  114 (136)
                      +++.+|||++|++||+||++|+++||+||++..+...++.++++++.++|+++|+++++++++|+||+++||+++|++|+
T Consensus       144 ~~~~~~P~~aAl~sflsF~ig~liPLLPf~~~~~~~~~~~~s~~~~~~~L~~lG~~~a~~s~~~~~~~~l~~~~~G~~aa  223 (234)
T cd02433         144 PELLGNPWSAAVSSFLLFALGALIPVLPFLFGMSGLAALVLSVLLVGLALLATGAVTGLLSGRSPGISALRQLAIGGGAA  223 (234)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Confidence            88888999999999999999999999999987455578999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 037637          115 PIRWGKVKIIE  125 (136)
Q Consensus       115 ~vty~iG~l~~  125 (136)
                      +++|++|++|+
T Consensus       224 ~vsy~iG~l~~  234 (234)
T cd02433         224 AVTYLLGLLFG  234 (234)
T ss_pred             HHHHHHHHHcC
Confidence            99999999874

Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=7.2e-36  Score=235.80  Aligned_cols=124  Identities=15%  Similarity=0.173  Sum_probs=112.7

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhh----------------------------------------------cCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMER----------------------------------------------SVDQ   34 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~----------------------------------------------lGi~   34 (136)
                      +|||.|||+|+|||+|.+++|++||+||++                                              +|++
T Consensus        47 ~SMa~GeYls~kse~d~~~~e~~re~~~i~~~pe~E~~el~~iy~~kG~~~~~a~~v~~~l~~~~~~~~~~m~~~elg~~  126 (225)
T cd02434          47 ISMAAGEYVSTKAERDFLHSEKKREEWEIENYPEGEKSEMVEIYSLKGLSEEVADQVVELLSKYRKLFVDIMMTEELGLI  126 (225)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCchhhHHHHHHhhccCC
Confidence            599999999999999999999999998752                                              6777


Q ss_pred             CCC-cccHHHHHHHHHHHHHhhhhhhhHHHhcccc------hhhHHHHHHHH-HHHHHHHHHHHhHHhcCCCchhHHHHH
Q 037637           35 RTA-VPSAIQIAVASSLAFLFWGKVPMLAAGFIKD------HHLRSSIALVA-AILSMVMLGIAGAALGKVPTMRSCVRV  106 (136)
Q Consensus        35 ~~~-~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~------~~~~~~~s~~~-~~~aL~~lG~~~a~~s~~~~~rs~~~~  106 (136)
                      +++ ..|||++|++||+||.+|+++||+||++..+      ....+.+++++ +.++|+++|++|++++++||+|+++||
T Consensus       127 ~~~~~~~P~~aAl~sflsf~~ggliPLlp~~~~~~~~~~~~~~~~~~~s~~~~~~~~L~~~G~~~~~~~~~~~~~~~l~~  206 (225)
T cd02434         127 PDDELPSPLKTALVTFLSFLVFGIIPLLPYLLGLYYYSQKEIDSVFALSILIFVAFTLFLLGSFKSKLYNGKWIISGIIM  206 (225)
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence            766 5799999999999999999999999998632      14567888888 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 037637          107 VVGGFVAVPIRWGKVKII  124 (136)
Q Consensus       107 l~~G~~aa~vty~iG~l~  124 (136)
                      +++|++|+++||++|+++
T Consensus       207 ~~~G~~aa~~ty~iG~l~  224 (225)
T cd02434         207 LINGAASGGVSFFLGVLF  224 (225)
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            999999999999999886

Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>cd02435 CCC1 CCC1

Probab=100.00  E-value=1.3e-35  Score=236.57  Aligned_cols=124  Identities=15%  Similarity=0.222  Sum_probs=114.6

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHh------------------------------------------------hcC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKME------------------------------------------------RSV   32 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~------------------------------------------------~lG   32 (136)
                      +|||+|||+|+|||+|.++++++||+||+                                                |+|
T Consensus        65 ~SMa~GeYlS~~sq~d~~~~~~~~e~~~i~~~~~~E~~e~l~~~~~~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~elg  144 (241)
T cd02435          65 ISMGLGGYLAAKSERDHYQREHKRKQEAVEASPSTEQEEIILYDLVQYGLVPLETAASTVTDLRKNPQALVDFLMRFGLG  144 (241)
T ss_pred             HHHHHhhHHHhhhhHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhChhHHHHHHHHHhhC
Confidence            69999999999999999999999988753                                                167


Q ss_pred             CCCCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCch-----hHHHHHH
Q 037637           33 DQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTM-----RSCVRVV  107 (136)
Q Consensus        33 i~~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~-----rs~~~~l  107 (136)
                      +++++..|||++|++||+||++|+++|++||++..+...++.++++++.++|+++|++++++++++++     |+++||+
T Consensus       145 ~~~~~~~~p~~aAl~s~lsf~lG~liPLlPy~~~~~~~~a~~~si~l~~~aL~ilG~~~s~~s~~~~~~~~~~~s~lrml  224 (241)
T cd02435         145 LEEPDTSRALISALTIGLSYFIGGLIPLLPYFFVSTVGEALLLSVIVTLVALFVFGYVKTWFTGGWGGAGGGVWGAVQML  224 (241)
T ss_pred             CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHH
Confidence            77777789999999999999999999999999875566899999999999999999999999999998     9999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037637          108 VGGFVAVPIRWGKVKII  124 (136)
Q Consensus       108 ~~G~~aa~vty~iG~l~  124 (136)
                      ++|++|+++||+++++|
T Consensus       225 ~~G~~aa~vty~l~~~~  241 (241)
T cd02435         225 VVGGLAAGAAWGLVKLL  241 (241)
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            99999999999999875

CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.

>KOG4473 consensus Uncharacterized membrane protein [Function unknown]

Probab=100.00  E-value=1.5e-34  Score=225.71  Aligned_cols=125  Identities=36%  Similarity=0.499  Sum_probs=118.4

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHh--------------------------------------------hcCCCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKME--------------------------------------------RSVDQRT   36 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~--------------------------------------------~lGi~~~   36 (136)
                      ||||+|||+|+|||+|+|.+|+++||+|.                                            |+|++++
T Consensus        79 ~SMaiGeyvsv~Sq~D~e~ae~q~erre~~a~~~~e~~E~~~Il~g~~~~E~lpvi~alq~~p~~~ldf~~R~elGl~~p  158 (247)
T KOG4473|consen   79 CSMAIGEYVSVKSQYDIEVAEVQMERREFYANSNLENDEIADILLGEEEKEELPVIKALQRTPELMLDFIIRYELGLDEP  158 (247)
T ss_pred             HHHhhccceeecchhhHHHHHHHHHHHHhhccchhhhHHHHHHhcCCCchhccchhHHhhhChHHHHHHHHHhhcccCCC
Confidence            79999999999999999999888888542                                            2889999


Q ss_pred             CcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHH
Q 037637           37 AVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPI  116 (136)
Q Consensus        37 ~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~v  116 (136)
                      +..+|.|+|++++++|.+||++||+||+|.+++..++.++++++.++|+.+|++++.+++.++.|+++|++++|++||++
T Consensus       159 ~~~~p~qaA~asa~afslGg~vPLl~~~fi~~~~~~~v~~vv~~~~aL~~fG~~ga~lg~ak~vrs~~r~vv~G~lAmaa  238 (247)
T KOG4473|consen  159 AENRPLQAAAASALAFSLGGIVPLLPAAFVKDYKVRIVVSVVATTFALFMFGYVGAHLGKAKVVRSSVRVVVGGWLAMAA  238 (247)
T ss_pred             CCCchHHHHHHHHHHHHhccHHhhhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhh
Q 037637          117 RWGKVKIIE  125 (136)
Q Consensus       117 ty~iG~l~~  125 (136)
                      ||+++++++
T Consensus       239 tf~l~Klig  247 (247)
T KOG4473|consen  239 TFGLTKLIG  247 (247)
T ss_pred             HHHHHHhcC
Confidence            999999874

>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=2.4e-34  Score=224.71  Aligned_cols=123  Identities=20%  Similarity=0.222  Sum_probs=113.7

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhh---------------------------------------------cCCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMER---------------------------------------------SVDQR   35 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~---------------------------------------------lGi~~   35 (136)
                      +|||+|+|+|+|+|||++++|++||+||++                                             +|+++
T Consensus        46 ~SMa~G~yls~~se~~~~~~e~~re~~e~~~~pe~e~~el~~iy~~~Gl~~~~a~~i~~~l~~~~~~~~~m~~ee~g~~~  125 (213)
T PF01988_consen   46 ISMAVGEYLSVKSERDLYEAEREREEWELENNPEEEKEELVEIYRAKGLSEEDAEEIAEELSKDKDALDFMMREELGLSP  125 (213)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHhHHHHHHHHhChHhHHHHHHHHHHHCCCCHHHHHHHHHHHHhCchHHHHHHhhhccCCc
Confidence            599999999999999999999999998753                                             56677


Q ss_pred             CCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHH
Q 037637           36 TAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVP  115 (136)
Q Consensus        36 ~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~  115 (136)
                      ++..|||++|+++|+||++|+++|++||++......++.++++++.++|+++|++|++++++|++|+++||+++|+++++
T Consensus       126 ~~~~~p~~~al~~~~sf~lg~liPllp~~~~~~~~~a~~~s~~~~~~~L~~~G~~~a~~~~~~~~~~~l~~~~~G~~aa~  205 (213)
T PF01988_consen  126 EEEESPWKAALATFLSFILGGLIPLLPYFFLPSVSEAFIASIAVTILALFILGYFKARISGQSWWRSGLEMLLIGLIAAA  205 (213)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence            77889999999999999999999999999983124789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 037637          116 IRWGKVKI  123 (136)
Q Consensus       116 vty~iG~l  123 (136)
                      ++|++|+|
T Consensus       206 ~~~~iG~L  213 (213)
T PF01988_consen  206 VTYLIGYL  213 (213)
T ss_pred             HHHHHhhC
Confidence            99999975

They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].

>cd02431 Ferritin_CCC1_C CCC1-related domain of ferritin

Probab=99.97  E-value=1.1e-31  Score=200.66  Aligned_cols=105  Identities=10%  Similarity=0.173  Sum_probs=98.8

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHH
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAA   80 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~lGi~~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~   80 (136)
                      +||+.|||+|+|||||.+++                   ||||+|++|++||.+|+++|++||++..+...++.++++++
T Consensus        45 ~SMa~G~YlS~kse~d~~~~-------------------~p~~~al~s~~sf~~g~~iPllp~~~~~~~~~a~~~s~~~~  105 (149)
T cd02431          45 LSMAIGAYLSTKSESGVKES-------------------NPVKSALYTGIAYIIGVVIPILPYLLLSSVYLALALSVTLA  105 (149)
T ss_pred             HHHHHHHHHHHhhHHhHHhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence            59999999999999997654                   89999999999999999999999998844468999999999


Q ss_pred             HHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 037637           81 ILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKII  124 (136)
Q Consensus        81 ~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~vty~iG~l~  124 (136)
                      .++|+++|+++++++++|++|+++||+++|.+++.++|++|+++
T Consensus       106 ~~~L~~~G~~~~~~s~~~~~~~~l~~~~~G~~aa~~t~~iG~l~  149 (149)
T cd02431         106 VLAILIFNFYISVASGISFRKKFIEMAGLALGAAFISFLLGYLL  149 (149)
T ss_pred             HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999875

Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea.

>TIGR00267 conserved hypothetical protein TIGR00267

Probab=99.96  E-value=6.8e-29  Score=188.67  Aligned_cols=120  Identities=12%  Similarity=0.148  Sum_probs=103.7

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhhcCCCCC------CcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHH
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRT------AVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSS   74 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~lGi~~~------~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~   74 (136)
                      +||+.|||++.|+|+|.|+.|.+++. ..+.|+.++      ...|||++|+++++||++|+++|++||++. |...++.
T Consensus        43 ~Sma~GeYv~e~ae~~~e~~ele~~~-~~~~g~~~~~~~~~~~~~~p~~aAl~sgls~~~g~liPllp~~~~-~~~~a~~  120 (169)
T TIGR00267        43 MSNAFGAFTAERAEEEREMRELEKSM-LMDEGKLDDTIIYKQARRRVYMSGFIDGFSTFMGSFVPVLPFLVF-DRMTATI  120 (169)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCchhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-chhHHHH
Confidence            59999999998888886665554333 233454433      346999999999999999999999999984 7778999


Q ss_pred             HHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 037637           75 IALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVK  122 (136)
Q Consensus        75 ~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~vty~iG~  122 (136)
                      ++++++.++|+++|+++++++++|++|+++||+++|.+++++||++|.
T Consensus       121 ~s~~~~~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G~~aa~it~~iG~  168 (169)
T TIGR00267       121 VTVLLTLIALLVLGVYLGRISRENILISSLKMVVIGLLVAVVSLLIEG  168 (169)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999974

This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.

>cd02437 CCC1_like_1 CCC1-related protein family

Probab=99.95  E-value=1.8e-27  Score=181.27  Aligned_cols=123  Identities=13%  Similarity=0.146  Sum_probs=99.2

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHH---HHHhh--cCCCCCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHH
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERD---FKMER--SVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSI   75 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re---~~e~~--lGi~~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~   75 (136)
                      +||+.|||+|.|+|+.-++.|.++.   .+|.+  ...+++...|||++++.+++||++|+++|++||++. |...++.+
T Consensus        48 ~Sma~g~yvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~al~sgls~~~G~llPLlp~~~~-~~~~a~~~  126 (175)
T cd02437          48 ISNGLGAAVAEEGSLRGMLEEKEKILLRLEQMLTSTREELAIRKADLPSGLIQGISTTLGGLLPLLPFLPF-DLWLAAGI  126 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHH
Confidence            6999999999997632222111110   01111  112233446899999999999999999999999976 56689999


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 037637           76 ALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKII  124 (136)
Q Consensus        76 s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~vty~iG~l~  124 (136)
                      +++++.++|+++|+++++++++|++|+++|++.+|+++++++|.+|++|
T Consensus       127 si~~~~~~L~~~G~~~~~~~~~~~~~~~~r~~~~g~la~~~t~~vg~l~  175 (175)
T cd02437         127 AVAIVLAILFILGLVIGKISKINVAISFVWAVGMVITGISLVFSVGKLF  175 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999875

CCC1_like_1: This is a protein family closely related to CCC1, a family of proteins involved in iron and manganese transport. Yeast CCC1 is a vacuole transmembrane protein responsible for the iron and manganese accumulation in vacuole.

>cd02436 Nodulin-21 Nodulin-21

Probab=99.95  E-value=1.6e-27  Score=177.63  Aligned_cols=97  Identities=21%  Similarity=0.125  Sum_probs=89.7

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHh--------hcCCCCCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhH
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKME--------RSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLR   72 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~--------~lGi~~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~   72 (136)
                      +||+.|||+|++||+|.|+++++||++|+        |+|+++++..||||+|+.|++||.+|+++|+++++|..|..++
T Consensus        47 ~SMa~GeYvSv~sq~d~e~a~i~~e~~el~rGl~~~lelgi~~~~~~~P~qAA~aSa~sF~~Ga~lPll~~~fl~p~~~~  126 (152)
T cd02436          47 CPMAIGEFVRVYRQYRRPRAARCLRGRNRARGPAPDSEPEGLRRQAPSPSSAATASALSFAAGALFPLLAAWFVASYASR  126 (152)
T ss_pred             HHHhhcchhhcccccchHHHHHHHHHHHhhcCCChhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence            69999999999999999999999999875        5778888889999999999999999999999999955577778


Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhcCCC
Q 037637           73 SSIALVAAILSMVMLGIAGAALGKVP   98 (136)
Q Consensus        73 ~~~s~~~~~~aL~~lG~~~a~~s~~~   98 (136)
                       .++++.+.++|+++|++.+++++.+
T Consensus       127 -~~~~~~~~~aL~~~G~~~A~~g~a~  151 (152)
T cd02436         127 -RVLPPQSSAPAAPPGRSPATVTASS  151 (152)
T ss_pred             -hHHHHHHHHHHHHHhHHHHHhcCCC
Confidence             8999999999999999999999876

Nodulin-21: This is a family of proteins that may be unique to certain plants. The family member in soybean is found to be nodule-specific and is abundant during nodule development. The proteins of this family thus may play a role in symbiotic nitrogen fixation.

>cd01059 CCC1_like CCC1-related family of proteins

Probab=99.92  E-value=1.5e-24  Score=160.55  Aligned_cols=98  Identities=28%  Similarity=0.446  Sum_probs=92.5

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHH-
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVA-   79 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~lGi~~~~~~~P~~aal~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~-   79 (136)
                      +||+.|||+|+|+|+|                          ++|+++++||.+|+++|++||++..+.+.++..++++ 
T Consensus        45 ~Sma~g~yls~~~e~~--------------------------~~al~~~~s~~~g~lipllp~~~~~~~~~a~~~si~~~   98 (143)
T cd01059          45 ISMAAGEYVSVKSQRD--------------------------KAALASGLSFILGGLLPLLPYLLLPAGSLALAVSVALV   98 (143)
T ss_pred             HHHHHHHHHHHhhHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence            5999999999999999                          9999999999999999999999884446788999998 


Q ss_pred             HHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 037637           80 AILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGKVKII  124 (136)
Q Consensus        80 ~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~vty~iG~l~  124 (136)
                      +.++|+++|+.|+|.+++||+|+++||+.+|.+++.++|.+|+++
T Consensus        99 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~~a~i~~~~g~l~  143 (143)
T cd01059          99 VALALFLLGAFVAKLGGAKKIRAALRMVVLGLLAAALTYLLGRLF  143 (143)
T ss_pred             HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999875

CCC1_like: This protein family includes the proteins related to CCC1, a yeast vacuole transmembrane protein responsible for the iron and manganese transport from the cytosol into vacuole. It also includes the proteins similar to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation.

>COG1814 Uncharacterized membrane protein [Function unknown]

Probab=99.90  E-value=2.7e-23  Score=164.38  Aligned_cols=127  Identities=17%  Similarity=0.229  Sum_probs=111.2

Q ss_pred             CceecchhhhhhhhhHHHHHHHHHHHHHhh--------------------------------------------cCCCCC
Q 037637            1 MRIATSVLVSVHTQVDTINFQAERDFKMER--------------------------------------------SVDQRT   36 (136)
Q Consensus         1 ~SMa~GeYlS~~sq~d~~~ae~~re~~e~~--------------------------------------------lGi~~~   36 (136)
                      +||+.|||+|+++|.|.+.++.++|+++..                                            .++...
T Consensus        57 l~mi~ge~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  136 (229)
T COG1814          57 LSMIIGEYLSVSSQLDAELAEIQKERRLLALSLGVADALVEILGALRGESEEEAREVAEQLLQGLIVGVHGRLSMGIGAY  136 (229)
T ss_pred             HHHHHhhhhhHHHHHhhhhhhhHHHHHHHhcCcchhHHHHHHHHHHcCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence            589999999999999999999886553310                                            223333


Q ss_pred             CcccHHHHH-HHHHHHHHhhhhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHhHHhcCCCchhHHHHHHHHHHHHHH
Q 037637           37 AVPSAIQIA-VASSLAFLFWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVP  115 (136)
Q Consensus        37 ~~~~P~~aa-l~s~~sF~~Gg~vPllp~~~~~~~~~~~~~s~~~~~~aL~~lG~~~a~~s~~~~~rs~~~~l~~G~~aa~  115 (136)
                      ...+|++++ +++++||++|+++|++||++..+...+++++++++.++|+++|++++++++.+++|+++||+..|++++.
T Consensus       137 ~~~~~~~~~~l~sg~s~~~G~l~Pllp~~~~~~~~~al~~si~~~~l~L~ilG~~~a~~s~~~~~~~~lr~v~~gl~aa~  216 (229)
T COG1814         137 LSSRPLLAATLSSGISFIIGALLPLLPFFFLPDVLSALIASIILALLALAILGAVLARLSGASIAKSILRMVLLGLLAAL  216 (229)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence            336899999 7999999999999999999995555578999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q 037637          116 IRWGKVKIIENR  127 (136)
Q Consensus       116 vty~iG~l~~~~  127 (136)
                      ++|.+|++++..
T Consensus       217 lt~~vg~l~~~~  228 (229)
T COG1814         217 LTYLVGRLFGIF  228 (229)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999864

>cd02437 CCC1_like_1 CCC1-related protein family

Probab=88.94  E-value=3.6  Score=31.10  Aligned_cols=33  Identities=15%  Similarity=0.192  Sum_probs=17.0

Q ss_pred             HhhcCCCCCCcccHHHHHHHHHHHHHhhhhhhhH
Q 037637           28 MERSVDQRTAVPSAIQIAVASSLAFLFWGKVPML   61 (136)
Q Consensus        28 e~~lGi~~~~~~~P~~aal~s~~sF~~Gg~vPll   61 (136)
                      ++|++...++..+|+++++.. .-..+.-++|.+
T Consensus        84 ~~e~~~~~~~~~~al~sgls~-~~G~llPLlp~~  116 (175)
T cd02437          84 REELAIRKADLPSGLIQGIST-TLGGLLPLLPFL  116 (175)
T ss_pred             HHHhccccChHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            334455444555666666633 334555555554

CCC1_like_1: This is a protein family closely related to CCC1, a family of proteins involved in iron and manganese transport. Yeast CCC1 is a vacuole transmembrane protein responsible for the iron and manganese accumulation in vacuole.

>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT)

Probab=87.12  E-value=9.2  Score=28.72  Aligned_cols=25  Identities=12%  Similarity=0.114  Sum_probs=16.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh
Q 037637          102 SCVRVVVGGFVAVPIRWGKVKIIEN  126 (136)
Q Consensus       102 s~~~~l~~G~~aa~vty~iG~l~~~  126 (136)
                      .++-.+.+|++...+++.+.+.+-+
T Consensus       142 ~~i~~~glGlll~~~~~~l~k~~~~  166 (181)
T PF08006_consen  142 FGIGLFGLGLLLIVITFYLTKLFIK  166 (181)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3555667777777777777766644

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00