Citrus Sinensis ID: 037654

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEGPYSTTSPTADPSHLPR
Secondary Structure (PSIPRED)
cccccEEEEEEEEEEEccHHHHHHHHHHHHccEEEcccccccccEEEEEccccEEEEEEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcHHHHHHHHHHHHHHHcccEcccccccccEEEEEEccccEEEEEEEccccccccccccccccccccHcHccc
Coil and Loop (DISEMBL)
MPVNIGATLNHISRESSDIRRLADFYKEIfgfeeieapnfgefKVIWLNLPGAFALhliernpgtklpegpysttsptadpshlpr
Flexible Loop (DISEMBL)
mpvnigatlnhisressdirRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPgtklpegpysttsptadpshlpr
Low Complexity Region (SEG)
MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEGPYSTTSPTADPSHLPR
Disordered region (IsUnstruct)
*****************DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE**************************
Disordered Region (DISOPRED)
****IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE**************************
Disordered Region (DISEMBL)
MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEG****************
Disordered Region (DISPRO)
*PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPG**********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEGPYSTTSPTADPSHLPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
449444112	145	PREDICTED: uncharacterized protein LOC10	1.0	0.593	0.720	3e-30
297822963	135	hypothetical protein ARALYDRAFT_482141 [	0.918	0.585	0.759	3e-30
21593078	135	unknown [Arabidopsis thaliana]	0.918	0.585	0.746	1e-29
18402873	135	lactoylglutathione lyase / glyoxalase I-	0.918	0.585	0.734	2e-29
297789936	135	hypothetical protein ARALYDRAFT_920158 [	0.918	0.585	0.746	4e-29
255552165	140	lactoylglutathione lyase, putative [Rici	0.988	0.607	0.732	1e-28
388493014	141	unknown [Lotus japonicus]	0.941	0.574	0.695	1e-27
224108031	140	predicted protein [Populus trichocarpa]	0.988	0.607	0.697	1e-27
357480883	140	Lactoylglutathione lyase [Medicago trunc	0.941	0.578	0.707	3e-27
297737061	143	unnamed protein product [Vitis vinifera]	0.988	0.594	0.5	3e-19

>gi|449444112|ref|XP_004139819.1| PREDICTED: uncharacterized protein LOC101211159 [Cucumis sativus] gi|449492582|ref|XP_004159039.1| PREDICTED: uncharacterized LOC101211159 [Cucumis sativus]

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/86 (72%), Positives = 73/86 (84%)

Query: 1  MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE 60
           PV   A+L HI+RESS+I RL+ FYKE+FGFEEIE+P+FGE KVIWLNLP AF LHLI+
Sbjct: 3  FPVAKAASLAHIARESSNIHRLSQFYKEMFGFEEIESPDFGELKVIWLNLPSAFQLHLIQ 62

Query: 61 RNPGTKLPEGPYSTTSPTADPSHLPR 86
          R+P +KLPEGP+S TSP ADPSHLPR
Sbjct: 63 RDPNSKLPEGPWSATSPVADPSHLPR 88

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822963|ref|XP_002879364.1| hypothetical protein ARALYDRAFT_482141 [Arabidopsis lyrata subsp. lyrata] gi|297325203|gb|EFH55623.1| hypothetical protein ARALYDRAFT_482141 [Arabidopsis lyrata subsp. lyrata]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 71/79 (89%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
          A+L HI+RESSDI+RLA+FYKE+FGFEEIE+P+FG+ KVIWLNLPGAFA+H+I+RNP T 
Sbjct: 2  ASLGHIARESSDIKRLAEFYKEVFGFEEIESPDFGDLKVIWLNLPGAFAMHIIQRNPSTN 61

Query: 67 LPEGPYSTTSPTADPSHLP 85
          LPEGPYS TS   DPSHLP
Sbjct: 62 LPEGPYSATSAVRDPSHLP 80

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593078|gb|AAM65027.1| unknown [Arabidopsis thaliana]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 69/79 (87%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
          A+L HI+RESSDI RLA FYKE+FGFEEIE+P+FG+ KV+WLNLPGAFA+H+I+RNP T 
Sbjct: 2  ASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLKVVWLNLPGAFAMHIIQRNPSTN 61

Query: 67 LPEGPYSTTSPTADPSHLP 85
          LPEGPYS TS   DPSHLP
Sbjct: 62 LPEGPYSATSAVKDPSHLP 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402873|ref|NP_565737.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana] gi|16604547|gb|AAL24279.1| At2g32090/F22D22.16 [Arabidopsis thaliana] gi|18958038|gb|AAL79592.1| At2g32090/F22D22.16 [Arabidopsis thaliana] gi|20197625|gb|AAD15395.2| expressed protein [Arabidopsis thaliana] gi|330253539|gb|AEC08633.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
          A+L HI+RESSDI RLA FYKE+FGFEEIE+P+FG+ +V+WLNLPGAFA+H+I+RNP T 
Sbjct: 2  ASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPSTN 61

Query: 67 LPEGPYSTTSPTADPSHLP 85
          LPEGPYS TS   DPSHLP
Sbjct: 62 LPEGPYSATSAVKDPSHLP 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297789936|ref|XP_002862888.1| hypothetical protein ARALYDRAFT_920158 [Arabidopsis lyrata subsp. lyrata] gi|297308652|gb|EFH39147.1| hypothetical protein ARALYDRAFT_920158 [Arabidopsis lyrata subsp. lyrata]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 70/79 (88%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
          A+L HI+RESSDI+RLA+FYKE+FGFEEIE+P+FG+ KVIWLNLPGAFA+H+I+RNP T 
Sbjct: 2  ASLGHIARESSDIKRLAEFYKEVFGFEEIESPDFGDLKVIWLNLPGAFAMHIIQRNPSTN 61

Query: 67 LPEGPYSTTSPTADPSHLP 85
          LPEGP S TS   DPSHLP
Sbjct: 62 LPEGPDSATSAVRDPSHLP 80

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552165|ref|XP_002517127.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223543762|gb|EEF45290.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%)

Query: 1  MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE 60
          M V  G  L+HISRES+DI RLA+FYKE FGFEEIE+P+FG FKVIWLNLP AF+ HLIE
Sbjct: 1  MAVAKGVCLSHISRESTDITRLANFYKETFGFEEIESPDFG-FKVIWLNLPQAFSFHLIE 59

Query: 61 RNPGTKLPEGPYSTTSPTADPSHLPR 86
          R P T+LPEGPYS TSP  DPSHL R
Sbjct: 60 RAPTTRLPEGPYSATSPVLDPSHLSR 85

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493014|gb|AFK34573.1| unknown [Lotus japonicus]

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/82 (69%), Positives = 68/82 (82%), Gaps = 1/82 (1%)

Query: 6  GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFA-LHLIERNPG 64
          G +LNHISRES+DI+RLA FYKE+FGFEE+E+P FGEFKV+WL LP +   LH+IERNP 
Sbjct: 5  GVSLNHISRESTDIKRLAQFYKEVFGFEEVESPVFGEFKVVWLRLPSSLLYLHVIERNPN 64

Query: 65 TKLPEGPYSTTSPTADPSHLPR 86
            LPEGP+S T+P  DPSHLPR
Sbjct: 65 NNLPEGPWSATAPVVDPSHLPR 86

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108031|ref|XP_002314695.1| predicted protein [Populus trichocarpa] gi|222863735|gb|EEF00866.1| predicted protein [Populus trichocarpa]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 70/86 (81%), Gaps = 1/86 (1%)

Query: 1  MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE 60
          M V  GA LNHISRESSD+RRLA+FYK+IFGFEEIE+P   EFKV+W+ +    ALHLIE
Sbjct: 1  MAVAKGACLNHISRESSDVRRLANFYKDIFGFEEIESPKL-EFKVLWIKISPDLALHLIE 59

Query: 61 RNPGTKLPEGPYSTTSPTADPSHLPR 86
          R+P TKLPEGPYS +SP  DP+HLPR
Sbjct: 60 RSPDTKLPEGPYSASSPVLDPTHLPR 85

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480883|ref|XP_003610727.1| Lactoylglutathione lyase [Medicago truncatula] gi|355512062|gb|AES93685.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 1/82 (1%)

Query: 6  GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP-GAFALHLIERNPG 64
          G  LNHISRES+DI RLA FY+EIFGFEE+E+P FGEFKV+WL +P  +  LHLIERNP 
Sbjct: 3  GVCLNHISRESNDINRLAKFYQEIFGFEEVESPKFGEFKVVWLRVPSSSLYLHLIERNPS 62

Query: 65 TKLPEGPYSTTSPTADPSHLPR 86
            LPEGP+S TSP  DPSHLPR
Sbjct: 63 NNLPEGPWSATSPVKDPSHLPR 84

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737061|emb|CBI26262.3| unnamed protein product [Vitis vinifera]

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 1  MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE 60
          M    G  ++HI+R S+D++RLA FY+EI GFE +E+PN G  +V+WL LP  F LHLI+
Sbjct: 1  MAAAQGVCIHHIARGSADVKRLAKFYQEILGFERVESPNLG-IEVVWLRLPPVFTLHLIQ 59

Query: 61 RNPGTKLPEGPYSTTSPTADPSHLPR 86
          ++P +KLPE P++ +S   DP HL R
Sbjct: 60 KDPESKLPETPWNPSSAVVDPKHLTR 85

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
TAIR|locus:2045482	135	AT2G32090 "AT2G32090" [Arabido	0.918	0.585	0.734	4.9e-30
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.686	0.320	0.383	7.8e-07

TAIR|locus:2045482 AT2G32090 "AT2G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query:     7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
             A+L HI+RESSDI RLA FYKE+FGFEEIE+P+FG+ +V+WLNLPGAFA+H+I+RNP T 
Sbjct:     2 ASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPSTN 61

Query:    67 LPEGPYSTTSPTADPSHLP 85
             LPEGPYS TS   DPSHLP
Sbjct:    62 LPEGPYSATSAVKDPSHLP 80

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 23/60 (38%), Positives = 34/60 (56%)

Query:     9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP 68
             LNH+SR   D+++  +FY ++ GF EIE P   +F   WL   G   +HL++     KLP
Sbjct:    21 LNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGV-GIHLVQAKDQDKLP 79


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.139   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 22  0.49    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  534 (57 KB)
  Total size of DFA:  105 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.32u 0.17s 11.49t   Elapsed:  00:00:00
  Total cpu time:  11.32u 0.17s 11.49t   Elapsed:  00:00:00
  Start:  Thu May  9 17:10:35 2013   End:  Thu May  9 17:10:35 2013

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.4__1201__AT2G32090.1 annotation not avaliable (135 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	86
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-15
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-04
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	7e-04
cd08351	123	cd08351, ChaP_like, ChaP, an enzyme involved in th	0.002
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	0.003
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	0.003

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 64.9 bits (159), Expect = 2e-15
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP 68
          L+H++    D+     FY ++ G EE   P F  F   WL       LHLIE +P   LP
Sbjct: 1  LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL-FPGAWLYAGDGPQLHLIEEDPPDALP 59

Query: 69 EGP 71
          EGP
Sbjct: 60 EGP 62

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNF--GEFKVIWLNLPGAFALHLIE--RNPG 64
            H      D+ +  DFY ++ G + +   +F  G+F +++L  P   +  ++E   N G
Sbjct: 1  FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 65 TKLPEGPYS 73
          T   E PY 
Sbjct: 61 T---EEPYD 66

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 35.5 bits (82), Expect = 7e-04
 Identities = 11/65 (16%), Positives = 26/65 (40%)

Query: 8  TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKL 67
           ++H++    D+ +  DFY ++ GF+ +E  + GE  +          +  +  N     
Sbjct: 1  RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPP 60

Query: 68 PEGPY 72
              +
Sbjct: 61 AAAGF 65

Length = 120

>gnl|CDD|176699 cd08351, ChaP_like, ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLN 49
           TLNH    + D    A+FY EI G    +   FG F V+ L+
Sbjct: 3  VTLNHTIVPARDREASAEFYAEILGLPWAKP--FGPFAVVKLD 43

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 123

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 33.6 bits (77), Expect = 0.003
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 16 SSDIRRLADFYKEIFGFEEI-EAPNFGEFKVIWLNLPGAFALHLIERNP 63
           SD+     FY+E+ GFE   E   + EF++  +   G F   +    P
Sbjct: 3  VSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEP 51

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEG 70
          H+     D+     FY+++ GFE +E    G     +L L G   L L E +       G
Sbjct: 1  HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE-FAFLRLGGTR-LELFEGDEPAPPSGG 58

Query: 71 PYS 73
             
Sbjct: 59 GGV 61

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
PRK11478	129	putative lyase; Provisional	99.27
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.21
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.16
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.09
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.06
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.06
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.05
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.05
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.03
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.02
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.01
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.01
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	98.99
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	98.99
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	98.98
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	98.95
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	98.95
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	98.95
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	98.94
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	98.94
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.94
PLN03042	185	Lactoylglutathione lyase; Provisional	98.94
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	98.93
PLN02300	286	lactoylglutathione lyase	98.91
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	98.9
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	98.9
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	98.9
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	98.89
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	98.88
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	98.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	98.85
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	98.85
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	98.84
PLN02367	233	lactoylglutathione lyase	98.84
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	98.84
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	98.84
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	98.83
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	98.83
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	98.82
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	98.81
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	98.79
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	98.79
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	98.78
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.77
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	98.77
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	98.76
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	98.73
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	98.73
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.69
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.69
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	98.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	98.67
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	98.65
PRK06724	128	hypothetical protein; Provisional	98.65
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.64
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	98.64
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	98.64
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	98.59
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	98.58
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	98.54
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	98.54
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.52
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.51
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.5
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.49
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.49
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.45
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.45
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	98.45
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.44
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	98.43
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	98.41
PRK10291	129	glyoxalase I; Provisional	98.37
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	98.34
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	98.29
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	98.21
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	98.2
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.16
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.13
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	98.13
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.06
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.05
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.03
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.01
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	97.96
PLN02300	286	lactoylglutathione lyase	97.84
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.79
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	97.28
COG3607	133	Predicted lactoylglutathione lyase [General functi	97.15
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.14
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.11
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	97.04
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	97.03
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	97.02
PLN03042	185	Lactoylglutathione lyase; Provisional	96.97
PLN02367	233	lactoylglutathione lyase	96.96
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	96.91
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	96.73
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	96.65
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	96.51
PRK11478	129	putative lyase; Provisional	96.41
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	96.4
PRK10291	129	glyoxalase I; Provisional	96.23
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	96.22
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	95.95
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	95.9
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	95.88
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	95.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	95.76
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	95.58
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	95.5
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	95.45
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.36
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	95.34
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	95.3
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	95.13
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	95.01
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	94.83
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	94.82
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	94.64
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	94.62
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	94.62
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	94.51
PRK10148	147	hypothetical protein; Provisional	94.49
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	94.47
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	94.42
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	94.22
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	93.94
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	93.85
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	93.55
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	93.54
PRK06724	128	hypothetical protein; Provisional	93.5
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	93.35
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	93.21
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	93.0
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	92.99
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	92.72
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	92.6
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	92.57
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	92.38
PRK04101	139	fosfomycin resistance protein FosB; Provisional	92.37
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	92.0
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	91.89
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	91.86
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	91.58
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	91.4
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	90.92
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	89.6
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	89.19
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	88.98
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	88.93
KOG4657	246	consensus Uncharacterized conserved protein [Funct	88.64
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	88.29
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	88.2
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	87.91
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	87.28
PF15067	236	FAM124: FAM124 family	87.15
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	86.14
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	85.43
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	85.28
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	84.75
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	84.67
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	84.04
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	83.23
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	82.26
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	81.64
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	81.11

>PRK11478 putative lyase; Provisional

Probab=99.27  E-value=4.2e-11  Score=73.71  Aligned_cols=60  Identities=20%  Similarity=0.167  Sum_probs=41.9

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC--ceeEEEEecCCCcEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG--EFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~--~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +|++.+++||+|.|+|+++|++||+++|||++..+....  ......+..+++..|+|+...
T Consensus         1 ~~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   62 (129)
T PRK11478          1 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP   62 (129)
T ss_pred             CCCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEec
Confidence            356889999999999999999999999999986432111  001122344456778887644

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.21  E-value=2e-10  Score=69.73  Aligned_cols=55  Identities=24%  Similarity=0.422  Sum_probs=42.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeee--CCCCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEA--PNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~--~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +++||+|.|+|+++|++||+++|||++..+  ....+....|+..+++..|+|++..
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCc
Confidence            478999999999999999999999997533  1112245678887666788888643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.16  E-value=2.3e-10  Score=74.43  Aligned_cols=57  Identities=28%  Similarity=0.528  Sum_probs=43.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC----C----------------CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP----N----------------FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~----~----------------~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+++||+|.|+|+++|++||+++|||++..+.    .                ......+++..+++..|+|++..+
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            57999999999999999999999999875321    0                011456777776667799998664

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.09  E-value=1e-09  Score=69.63  Aligned_cols=31  Identities=16%  Similarity=0.386  Sum_probs=28.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      ++.|++|.|+|+++|++||+++|||++..+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~   32 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHE   32 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeee
Confidence            6899999999999999999999999986543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.06  E-value=6.7e-10  Score=68.03  Aligned_cols=43  Identities=19%  Similarity=0.275  Sum_probs=36.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEec
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNL   50 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~   50 (86)
                      |.+.+++|++|.|+|+++|++||+++|||++..+.+    ..+|+..
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~   44 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----QSVYLRA   44 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----CeEEEEe
Confidence            678899999999999999999999999999876542    3456654

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.06  E-value=1.7e-09  Score=65.28  Aligned_cols=54  Identities=19%  Similarity=0.231  Sum_probs=41.5

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |.+++||.|.|+|++++++||+++|||+...+.+..  ...++..++ ..+++....
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~-~~~~l~~~~   54 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKALRFGS-QKINLHPVG   54 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceEEEeCC-EEEEEecCC
Confidence            468999999999999999999999999987654321  345666653 677776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.05  E-value=2.5e-09  Score=67.02  Aligned_cols=57  Identities=16%  Similarity=0.230  Sum_probs=40.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-------------CceeEEEEec-CCCcEEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-------------GEFKVIWLNL-PGAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-------------~~~~~~~l~~-~~~~~l~L~~~~~   63 (86)
                      |.+++||+|.|+|+++|++||++ |||++..+...             .....+++.. +++..|+|++..+
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~   71 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHH   71 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecC
Confidence            46899999999999999999999 99987543211             1133455554 2357889987543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.05  E-value=1.1e-09  Score=66.11  Aligned_cols=55  Identities=24%  Similarity=0.541  Sum_probs=41.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecCCCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +|+||+|.|+|++++++||+++|||+++....    .......++..+ ...++|+....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~   59 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-EGHIELFLNPS   59 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-SSCEEEEEEES
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-ccceeeeeecc
Confidence            68999999999999999999999999975432    222455667765 45566665443

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.03  E-value=4.5e-09  Score=63.47  Aligned_cols=57  Identities=26%  Similarity=0.346  Sum_probs=40.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-C-ceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-G-EFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~-~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+++||+|.|+|++++++||+++|||++..+... + ..-.+++..+++..++|+....
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~   60 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPN   60 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCC
Confidence            6899999999999999999999999998654211 1 0112334444456777775443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.02  E-value=1.2e-09  Score=64.56  Aligned_cols=54  Identities=35%  Similarity=0.650  Sum_probs=41.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      |+|++|.|+|++++++||+++|||+...+.... ...+|+..++...++|+....
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~   54 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL-FPGAWLYAGDGPQLHLIEEDP   54 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC-CCceEEEeCCCcEEEEEecCC
Confidence            689999999999999999999999987654322 245788876555788876544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.01  E-value=3.3e-09  Score=67.67  Aligned_cols=48  Identities=19%  Similarity=0.209  Sum_probs=36.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-C-CCc-eeEEEEecC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP-N-FGE-FKVIWLNLP   51 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~-~~~-~~~~~l~~~   51 (86)
                      +.+.+++||+|.|+|+++|.+||+++|||++..+. . .+. ...+|+..+
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~   52 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCS   52 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecC
Confidence            45679999999999999999999999999975442 1 111 235677654

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.01  E-value=2.6e-09  Score=67.38  Aligned_cols=50  Identities=22%  Similarity=0.382  Sum_probs=40.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      |.+++||+|.|+|+++|++||+++|||++..+.    ...+|+..+ +..+.+..
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~-g~~l~l~~   51 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKG----RKTAYFDLN-GLWIALNE   51 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeec----CeeEEEecC-CeEEEeec
Confidence            679999999999999999999999999987553    245677775 45666543

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=98.99  E-value=3.9e-09  Score=66.05  Aligned_cols=54  Identities=19%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC---ceeEEEEecCCCcEEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG---EFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~---~~~~~~l~~~~~~~l~L~~   60 (86)
                      |.+++||+|.|+|+++|++||+++|||++..+.+..   .....|+..+ +..|++..
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~   58 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG-GLWIAIME   58 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC-CeEEEEec
Confidence            679999999999999999999999999886553211   0112344444 46677764

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.99  E-value=2.5e-09  Score=66.31  Aligned_cols=50  Identities=14%  Similarity=0.214  Sum_probs=38.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEE
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHL   58 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L   58 (86)
                      ++.++.||+|.|+|+++|.+||+++|||++..+.+    ..+|+..++. ..+.+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~i~l   53 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA----KATYFRSDARDHTLVY   53 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----CeEEEEcCCccEEEEE
Confidence            47899999999999999999999999999865432    3567776532 33444

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.98  E-value=2.3e-09  Score=65.88  Aligned_cols=50  Identities=18%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~   59 (86)
                      +++.||+|.|+|+++|++||+++|||++..+..   ...+|+..++. ..+.|.
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DGALYLRMDDRAWRIAVH   51 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC---CCeEEEEccCCceEEEEE
Confidence            478999999999999999999999999876532   23567776532 445554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=98.95  E-value=6.6e-09  Score=67.46  Aligned_cols=51  Identities=18%  Similarity=0.259  Sum_probs=39.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC--CCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP--GAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~--~~~~l~L~~~   61 (86)
                      +++||+|.|+|+++|++||+++|||++..+..   ....|+..+  ++..|+|+..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CEEEEEecCCCCCCEEEEEeC
Confidence            58999999999999999999999999876543   234455543  2577888775

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=98.95  E-value=7.2e-09  Score=65.13  Aligned_cols=52  Identities=17%  Similarity=0.310  Sum_probs=38.1

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ++|++|.|+|+++|++||+++|||++..+.........++.. ++..|.|...
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~-g~~~l~l~~~   52 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQ-GDINFVLNSP   52 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEc-CCEEEEEecC
Confidence            589999999999999999999999987654322123455554 3566776543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=98.95  E-value=6.8e-09  Score=63.89  Aligned_cols=50  Identities=26%  Similarity=0.361  Sum_probs=37.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+++|++|.|+|+++|++||+++|||++....+    ...++..+++..|.+..
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~~~~   52 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG----PFAVVKLDNGVSLDFAQ   52 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----CEEEEEcCCCcEEEEec
Confidence            589999999999999999999999999865321    23444544455566544

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=98.94  E-value=6.3e-09  Score=63.00  Aligned_cols=56  Identities=16%  Similarity=0.283  Sum_probs=39.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CC--ceeEEEEecC---CCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN-FG--EFKVIWLNLP---GAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~--~~~~~~l~~~---~~~~l~L~~~~~   63 (86)
                      +++||+|.|+|+++|++||+++|||++..+.. .+  .....++...   ++..|+|+....
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            57999999999999999999999999865432 11  1223445432   346788876543

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.94  E-value=8.3e-09  Score=67.36  Aligned_cols=55  Identities=22%  Similarity=0.348  Sum_probs=40.8

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCC-cEEEE
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGA-FALHL   58 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~-~~l~L   58 (86)
                      |.|.+|+||+|.|+|+++|++||+++|||++..+.  ..+.....|+...+. ..+.+
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l   59 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAY   59 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEE
Confidence            77899999999999999999999999999986542  112234567776432 34444

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.94  E-value=4.9e-09  Score=63.80  Aligned_cols=55  Identities=27%  Similarity=0.462  Sum_probs=43.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeee--CCCCceeEEEEecCCC-cEEEEEecCCC
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEA--PNFGEFKVIWLNLPGA-FALHLIERNPG   64 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~--~~~~~~~~~~l~~~~~-~~l~L~~~~~~   64 (86)
                      +||+|.|+|++++++||+++||++....  .+..+.+..|+..+++ ..|+|++..+.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~   58 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDG   58 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESST
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCC
Confidence            7999999999999999999999987532  1233477888888765 78999987654

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=98.94  E-value=7e-09  Score=69.55  Aligned_cols=44  Identities=18%  Similarity=0.357  Sum_probs=34.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLN   49 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~   49 (86)
                      -..++|++|.|+|+++|++||+++|||++..+..  .+.+..+|+.
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~   70 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLG   70 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEe
Confidence            3479999999999999999999999999876532  2235556654

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.93  E-value=8.3e-09  Score=62.95  Aligned_cols=52  Identities=23%  Similarity=0.399  Sum_probs=40.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC-CcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG-AFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~-~~~l~L~~~~   62 (86)
                      ++++||+|.|+|++++++||+++|||++..+.+    ..+++..++ ...|.+...+
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----STAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----CEEEEecCCCeEEEEEEeCC
Confidence            378999999999999999999999999976632    457777654 3456665543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=98.91  E-value=1.4e-08  Score=71.28  Aligned_cols=49  Identities=16%  Similarity=0.306  Sum_probs=38.6

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLP   51 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~   51 (86)
                      -|.|.+++||+|.|+|+++|++||+++|||++..+..  ......+|+..+
T Consensus        19 ~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g   69 (286)
T PLN02300         19 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG   69 (286)
T ss_pred             ccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccC
Confidence            3678999999999999999999999999999865432  122346777654

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=98.90  E-value=7.6e-09  Score=62.32  Aligned_cols=53  Identities=17%  Similarity=0.211  Sum_probs=38.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ++||+|.|+|+++|++||+++|||++..... .....+++..++...++++...
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   53 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYAVFSTGGGAVGGLMKAP   53 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceEEEEeCCccEEEEecCC
Confidence            4899999999999999999999999865542 1124556666544456665443

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=98.90  E-value=1.1e-08  Score=64.15  Aligned_cols=51  Identities=24%  Similarity=0.388  Sum_probs=38.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC---CcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG---AFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~---~~~l~L~~   60 (86)
                      .+++||+|.|+|+++|++||+++|||++..+..   ...+|+..++   ...|.|..
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~---~~~~~~~~~~~~~~~~i~l~~   55 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK---GRGAFLRAAGGGDHHNLFLIK   55 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec---CcEEEEECCCCCCCcEEEEec
Confidence            579999999999999999999999999875532   1356777642   23455543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=98.90  E-value=8.2e-09  Score=62.76  Aligned_cols=41  Identities=17%  Similarity=0.350  Sum_probs=33.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      |.+++||.|.|+|+++|++||++ |||++..+..    ..+|+..+
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~----~~~~~~~~   41 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD----DELYYRGY   41 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC----CeEEEecC
Confidence            57899999999999999999999 9999866532    34677654

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=98.89  E-value=4.9e-09  Score=67.49  Aligned_cols=44  Identities=27%  Similarity=0.413  Sum_probs=34.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---CCceeEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN---FGEFKVIWLNLP   51 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~~~~~~~~l~~~   51 (86)
                      +|+||+|.|+|+++|++||+++|||++..+..   .+....+|+..+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~   47 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLD   47 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecC
Confidence            47999999999999999999999999864321   122456777764

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=98.88  E-value=8.9e-09  Score=63.00  Aligned_cols=33  Identities=18%  Similarity=0.401  Sum_probs=30.0

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +.+++||+|.|+|+++|++||+++|||++..+.
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   34 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRD   34 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeec
Confidence            578999999999999999999999999986553

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=98.87  E-value=1.1e-08  Score=61.87  Aligned_cols=53  Identities=23%  Similarity=0.506  Sum_probs=39.2

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC--ceeEEEEecCC---CcEEEEEec
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFG--EFKVIWLNLPG---AFALHLIER   61 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~--~~~~~~l~~~~---~~~l~L~~~   61 (86)
                      ++||+|.|+|++++.+||+++|||++..+....  ....+|+..++   +..|++...
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            589999999999999999999999987543221  24556777643   356776543

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=98.85  E-value=2.8e-08  Score=63.38  Aligned_cols=48  Identities=23%  Similarity=0.445  Sum_probs=36.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC--CceeEEEEecC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF--GEFKVIWLNLP   51 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~l~~~   51 (86)
                      .+.++++||.|.|+|+++|++||+++|||++..+...  .....+|+..+
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~   62 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYG   62 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCC
Confidence            4578999999999999999999999999998654321  11234566543

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=98.85  E-value=2.5e-08  Score=61.75  Aligned_cols=54  Identities=20%  Similarity=0.455  Sum_probs=40.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC--CCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP--GAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~--~~~~l~L~~~~~   63 (86)
                      +++||.|.|+|++++++||+++|||++..+.+.  ...+|+..+  +...|.++....
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~   56 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GGLVFLSRDPDEHHQIALITGRP   56 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--CcEEEEEecCCCceEEEEEecCC
Confidence            589999999999999999999999998755431  245677654  235677765443

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=98.84  E-value=1.6e-08  Score=61.49  Aligned_cols=53  Identities=25%  Similarity=0.477  Sum_probs=41.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC---CceeEEEEecCCCcEEEEEecC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNF---GEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~---~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ++||+|.|+|++++++||+++|||+.......   .....+|+..+ +..|+|+...
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~   56 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-NVQIELIEPL   56 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-CEEEEEEEEC
Confidence            58999999999999999999999998654321   22456788874 6778888654

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=98.84  E-value=3.1e-08  Score=68.72  Aligned_cols=44  Identities=16%  Similarity=0.358  Sum_probs=35.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLN   49 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~   49 (86)
                      -..++|++|.|+|+++|++||+++|||++..+..  .+++..+|+.
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~  118 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMG  118 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEee
Confidence            4579999999999999999999999999876532  2346777775

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=98.84  E-value=1.8e-08  Score=61.44  Aligned_cols=53  Identities=19%  Similarity=0.394  Sum_probs=40.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +++|++|.|+|+++|++||+++|||+......  ..+...+|+..+ +..|+|+..
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~   55 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-NTKVELLEP   55 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-CEEEEEEec
Confidence            47999999999999999999999999864321  112456777775 567888753

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=98.84  E-value=1.5e-08  Score=63.52  Aligned_cols=48  Identities=23%  Similarity=0.360  Sum_probs=37.0

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |+||+|.|+|++++++||+++|||++..+..    ..+++.++ +..+.+...
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~-~~~l~l~~~   48 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----KTAYFTIG-GTWLALNEE   48 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----ccceEeeC-ceEEEEEcc
Confidence            6899999999999999999999999865432    34566765 466766543

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.83  E-value=3.6e-08  Score=60.43  Aligned_cols=53  Identities=25%  Similarity=0.384  Sum_probs=40.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh---CCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIF---GFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL---G~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +|+||+|.|+|++++++||+++|   ||++..+..   ....|+...++..|.|....+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE---DGRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec---cCceEEecCCceEEEEEeccc
Confidence            58999999999999999999999   999876542   133555433457788876554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=98.83  E-value=2.5e-08  Score=59.97  Aligned_cols=40  Identities=18%  Similarity=0.457  Sum_probs=34.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      +++|+.|.|+|++++++||+++|||++..+.+    ..+|+..+
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~~~~~~~   41 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GSVYLRCS   41 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC----CeEEEecC
Confidence            68999999999999999999999999876542    45788775

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.82  E-value=2.3e-08  Score=64.42  Aligned_cols=45  Identities=20%  Similarity=0.421  Sum_probs=34.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-----CceeEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-----GEFKVIWLNLP   51 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-----~~~~~~~l~~~   51 (86)
                      .+++||+|.|+|+++|++||+++|||++..+...     +....+|+..+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~   57 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCN   57 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeC
Confidence            5899999999999999999999999998643211     12356677664

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=98.81  E-value=3.9e-08  Score=63.72  Aligned_cols=31  Identities=23%  Similarity=0.448  Sum_probs=28.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .+|+||+|.|+|+++|++||+++|||++...
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~   32 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEY   32 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEE
Confidence            3799999999999999999999999998643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.79  E-value=8.2e-08  Score=58.07  Aligned_cols=51  Identities=16%  Similarity=0.311  Sum_probs=39.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +-||.|.|+|+++|++||+++|||++..+++   ...+++..++...+.++...
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~---~~~~~l~~~~~~~~~l~~~~   51 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED---RRLAFFWVGGRGMLLLFDPG   51 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC---CceEEEEcCCCcEEEEEecC
Confidence            4589999999999999999999999876432   24577887765667776644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.79  E-value=4.3e-08  Score=59.57  Aligned_cols=27  Identities=22%  Similarity=0.496  Sum_probs=25.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      ||+|.|+|+++|++||+++|||++...
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~   28 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRS   28 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeec
Confidence            999999999999999999999998643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=98.78  E-value=3.3e-08  Score=59.90  Aligned_cols=42  Identities=19%  Similarity=0.474  Sum_probs=34.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      +.+|+|+.|.|+|++++++||+++|||+...+.+    ..+|+..+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~   42 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIVYLRAT   42 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEEEEECC
Confidence            4689999999999999999999999999865432    35677654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.77  E-value=2.8e-08  Score=69.34  Aligned_cols=52  Identities=17%  Similarity=0.249  Sum_probs=38.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC-CcEEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG-AFALHLIE   60 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~-~~~l~L~~   60 (86)
                      |.+++||+|.|+|+++|++||+++|||++..+...   ...|+++++ +..+.+..
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~~---~~~~~~~~~~~~~~~l~~   53 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGEN---DALYLRLDSRAHRIAVHP   53 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCCC---ceEEEEcCCCceEEEEEE
Confidence            46899999999999999999999999998654321   234667753 23454443

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=98.77  E-value=4.3e-08  Score=62.65  Aligned_cols=49  Identities=16%  Similarity=0.426  Sum_probs=36.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHL   58 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L   58 (86)
                      .+++||+|.|+|+++|++||+++|||++.....   ...+|+..++. ..+.+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~~~l~~~~~~~~~~l   52 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---DQMAFLRCNSDHHSIAI   52 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---CeEEEEECCCCcceEEE
Confidence            489999999999999999999999999864422   13467766532 33444

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=98.76  E-value=4.7e-08  Score=59.93  Aligned_cols=46  Identities=30%  Similarity=0.447  Sum_probs=35.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEE
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHL   58 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L   58 (86)
                      +++||.|.|+|++++++||+++|||++....+    ..+|+..+ +..+.+
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~-~~~~~l   46 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD----KGAYLEAG-DLWLCL   46 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC----CceEEecC-CEEEEE
Confidence            58999999999999999999999999865432    24566665 444444

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=98.73  E-value=7.8e-08  Score=58.56  Aligned_cols=49  Identities=24%  Similarity=0.358  Sum_probs=34.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ++||+|.|+|+++|++||+. |||++......  ...+++..+++..|.|..
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~~~~~~~~~~~l~l~~   49 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPHVEAVLPGGVRLAWDT   49 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCcEEEEeCCCEEEEEEc
Confidence            58999999999999999975 99998643321  134556655456665543

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=98.73  E-value=3.3e-08  Score=60.17  Aligned_cols=32  Identities=25%  Similarity=0.535  Sum_probs=29.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +.+++||.|.|+|++++++||+++|||++..+
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~   33 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEE   33 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEecc
Confidence            67999999999999999999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.69  E-value=5.3e-08  Score=68.28  Aligned_cols=35  Identities=23%  Similarity=0.327  Sum_probs=31.2

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .|.+.+++||+|.|+|+++|++||+++|||++..+
T Consensus       140 ~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~  174 (303)
T TIGR03211       140 GVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQ  174 (303)
T ss_pred             CcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEee
Confidence            35678999999999999999999999999998543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.69  E-value=2.5e-08  Score=59.42  Aligned_cols=31  Identities=19%  Similarity=0.568  Sum_probs=28.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +++||+|.|+|+++|++||+++|||+...+.
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~   32 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDT   32 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeec
Confidence            6899999999999999999999999997654

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=98.67  E-value=1.5e-07  Score=54.67  Aligned_cols=53  Identities=28%  Similarity=0.422  Sum_probs=41.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCCC
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      ||+|.|+|++++++||+++|||++...........+++..+ +..|++....+.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCCCC
Confidence            89999999999999999999999876643222456677765 578888876553

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.67  E-value=1.3e-07  Score=56.39  Aligned_cols=51  Identities=29%  Similarity=0.366  Sum_probs=34.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CCceeEEEEecCC--CcEEEEEec
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPN-FGEFKVIWLNLPG--AFALHLIER   61 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~~~~~~~l~~~~--~~~l~L~~~   61 (86)
                      ||+|.|+|++++++||+++|||++..+.. .++...+.+...+  ++.|++...
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   54 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPP   54 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCC
Confidence            89999999999999999999999876542 1212333333322  355666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.65  E-value=4.3e-07  Score=55.19  Aligned_cols=29  Identities=24%  Similarity=0.411  Sum_probs=26.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +.|+.|.|+|+++|.+||+++|||+....
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~   29 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFL   29 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEee
Confidence            47999999999999999999999998643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=98.65  E-value=4.3e-08  Score=61.76  Aligned_cols=34  Identities=24%  Similarity=0.477  Sum_probs=27.8

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhh---CCeEe
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIF---GFEEI   35 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vL---G~~~~   35 (86)
                      |.-| +.+++||+|.|+|+++|++||+++|   |+++.
T Consensus         1 ~~~~-~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~   37 (128)
T PRK06724          1 MNTL-RAGIHHIEFWVANLEESISFYDMLFSIIGWRKL   37 (128)
T ss_pred             CCcc-CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEe
Confidence            3334 5789999999999999999999966   66653

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.64  E-value=1.6e-07  Score=62.86  Aligned_cols=58  Identities=19%  Similarity=0.441  Sum_probs=42.1

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecC-CCcEEEEEecCC
Q 037654            6 GATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLP-GAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~-~~~~l~L~~~~~   63 (86)
                      +.+++||++.|+  |++++++||+++|||+...+..    ........+..+ +++.|.|.+...
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            368999999999  9999999999999999865432    122334455543 357788876544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.64  E-value=7.8e-08  Score=61.42  Aligned_cols=39  Identities=18%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      .||+|.|+|+++|++||+++|||++..+..   ...+|+...
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---~~~~~l~~~   39 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---DRIVFMRCH   39 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---CEEEEEEcC
Confidence            499999999999999999999999876532   246777754

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=98.64  E-value=1.3e-07  Score=56.68  Aligned_cols=45  Identities=29%  Similarity=0.521  Sum_probs=34.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ||+|.|+|+++|++||+++|||++..+.+    ..+|+..+ +..|.+..
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~----~~~~~~~~-~~~l~~~~   45 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS----KEAYFELA-GLWICLME   45 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC----ceeEEEec-CeEEEecc
Confidence            89999999999999999999999875542    34566664 45555543

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=98.59  E-value=3.3e-07  Score=56.95  Aligned_cols=51  Identities=24%  Similarity=0.386  Sum_probs=36.5

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCC-cEEEEEe
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      +||+|.|+|+++|++||+++|||++...... +....+|+..++. ..|.+..
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFP   53 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEc
Confidence            5999999999999999999999998644221 1135678776542 3455443

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=98.58  E-value=4.7e-07  Score=54.77  Aligned_cols=30  Identities=27%  Similarity=0.561  Sum_probs=26.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +|+||+|.|+|+++|++||+ +|||++..+.
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~   31 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG   31 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec
Confidence            68999999999999999997 7999986543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.54  E-value=3.3e-07  Score=56.17  Aligned_cols=49  Identities=18%  Similarity=0.254  Sum_probs=35.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+|+|.|+|+++|++||++ |||+...+....  ...++..+++..|.|+..
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~   50 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAACMVISDNIFVMLLTE   50 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeEEEEECCceEEEEEcH
Confidence            5899999999999999987 899976432221  234555555577777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.54  E-value=7.8e-07  Score=54.17  Aligned_cols=50  Identities=14%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHh---hCCeEeeeCCCCceeEEEEecC-CCcEEEEEec
Q 037654            9 LNHISRESSDIRRLADFYKEI---FGFEEIEAPNFGEFKVIWLNLP-GAFALHLIER   61 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~v---LG~~~~~~~~~~~~~~~~l~~~-~~~~l~L~~~   61 (86)
                      ++||+|.|+|+++|++||+++   |||++..+...   ..+++..+ ++..+.|...
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~---~~~~~~~~~~~~~~~l~~~   54 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGP---GAVGYGKGGGGPDFWVTKP   54 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCC---ceeEeccCCCCceEEEecc
Confidence            589999999999999999999   69998755411   22334433 2466777653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.52  E-value=5.1e-07  Score=63.02  Aligned_cols=46  Identities=24%  Similarity=0.426  Sum_probs=35.0

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---C-C-ceeEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN---F-G-EFKVIWLNLP   51 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~-~-~~~~~~l~~~   51 (86)
                      +.+|+||+|.|+|+++|++||+++|||++..+..   . + ....+|+..+
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~  190 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCN  190 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEEC
Confidence            4689999999999999999999999999865421   1 1 0135677664

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.51  E-value=8.2e-07  Score=53.95  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=25.9

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      -|+.|.|+|+++|.+||+++|||+...+.
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~   31 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR   31 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc
Confidence            49999999999999999999999976543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.50  E-value=4.4e-07  Score=65.56  Aligned_cols=59  Identities=24%  Similarity=0.409  Sum_probs=42.6

Q ss_pred             CCccceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEec-CCCcEEEEEec
Q 037654            3 VNIGATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNL-PGAFALHLIER   61 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~-~~~~~l~L~~~   61 (86)
                      .|.+.+++||+|+|+  |++++++||+++|||+...+..    .......++.. ++.+.|+|.++
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep  218 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEP  218 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEecc
Confidence            466889999999999  9999999999999999864432    11122223432 34578888764

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.49  E-value=3.2e-07  Score=63.95  Aligned_cols=33  Identities=24%  Similarity=0.533  Sum_probs=30.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      |.+++||+|.|+|+++|++||+++|||++..+.
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~   34 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESD   34 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEec
Confidence            679999999999999999999999999987553

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.49  E-value=6.3e-07  Score=62.85  Aligned_cols=33  Identities=21%  Similarity=0.393  Sum_probs=30.0

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +.+++||+|.|+|+++|++||+++|||++..+.
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~   34 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRD   34 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeec
Confidence            568999999999999999999999999987553

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.45  E-value=6.8e-07  Score=53.81  Aligned_cols=47  Identities=26%  Similarity=0.473  Sum_probs=36.7

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654           12 ISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus        12 I~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |+|.|+|+++|.+||+++|||++..+..   ...+++..+ +..+++...+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~---~~~~~~~~~-~~~~~l~~~~   48 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN---DGVAFFQLG-GLVLALFPRE   48 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC---CceEEEEcC-CeEEEEecch
Confidence            7899999999999999999999876522   245677774 5678877543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.45  E-value=8.6e-07  Score=61.78  Aligned_cols=34  Identities=32%  Similarity=0.462  Sum_probs=30.6

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +.+.+++||+|.|+|+++|++||+++|||++..+
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~  165 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEY  165 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEE
Confidence            4567999999999999999999999999998654

The enzyme from Bacillus brevis contains manganese.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.45  E-value=1.6e-06  Score=52.09  Aligned_cols=48  Identities=25%  Similarity=0.324  Sum_probs=35.2

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654           12 ISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        12 I~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      |.|.|+|+++|++||+++||+++....+    ..+++..+++..+.+.....
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~l~~~~~   49 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TFALFVLGSGVKLGLWSRHT   49 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ceEEEEeCCCcEEEEeeccc
Confidence            6799999999999999999999765421    23445554467777776443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.44  E-value=1.6e-06  Score=61.08  Aligned_cols=55  Identities=20%  Similarity=0.370  Sum_probs=42.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      -+.+.-|.|.|+|++++..||++||||++..+..    ..+.+.+++...|.|.+.+++
T Consensus         8 ~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~----~~v~L~vgg~~LL~L~q~~~a   62 (265)
T COG2514           8 PTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD----GSVTLGVGGTPLLTLEQFPDA   62 (265)
T ss_pred             CcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC----ceEEEeeCCEEEEEEEeCCCC
Confidence            3578899999999999999999999999987753    446678876545555554443

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.43  E-value=1.6e-06  Score=52.40  Aligned_cols=46  Identities=24%  Similarity=0.342  Sum_probs=34.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      +.+|.|+|+++|++||+++|||++..+.+    ..+.+..+++ ..|.+..
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~l~~   50 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WYVSLRSPDGGVELAFML   50 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cEEEEecCCCceEEEEcc
Confidence            67899999999999999999999876532    2344555443 5666654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.41  E-value=5.5e-07  Score=54.90  Aligned_cols=29  Identities=17%  Similarity=0.409  Sum_probs=27.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEee
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~   36 (86)
                      +++|+.|.|+|+++|++||+++|||++..
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~   30 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVM   30 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEee
Confidence            68999999999999999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=98.37  E-value=2e-06  Score=53.14  Aligned_cols=39  Identities=15%  Similarity=0.411  Sum_probs=29.3

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecC
Q 037654           13 SRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLP   51 (86)
Q Consensus        13 ~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~   51 (86)
                      +|.|+|+++|++||+++|||++..+..  ......+|+..+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~   41 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYG   41 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccC
Confidence            478999999999999999999865432  122456777654

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=98.34  E-value=3.6e-06  Score=49.94  Aligned_cols=47  Identities=28%  Similarity=0.296  Sum_probs=35.3

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654           13 SRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus        13 ~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .|.|+|+++|++||+++|||++....+.  ...+++..+ +..++|....
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~--~~~~~~~~~-~~~~~l~~~~   49 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE--PGYAFLSRG-GAQLMLSEHD   49 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC--CcEEEEEeC-CEEEEEeccC
Confidence            5899999999999999999998765431  245666664 5778876543

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=98.29  E-value=4.8e-06  Score=50.78  Aligned_cols=47  Identities=19%  Similarity=0.228  Sum_probs=35.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ...|.|+|+++|++||++ |||+...+...   ..+++..+ +..|+|....
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~~~~~~~-~~~l~l~~~~   51 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---GYMILRRG-DLELHFFAHP   51 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---CEEEEEcC-CEEEEEEecC
Confidence            467999999999999999 99998765431   34556664 5678887643

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.21  E-value=1.3e-05  Score=48.22  Aligned_cols=49  Identities=29%  Similarity=0.272  Sum_probs=34.6

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEec
Q 037654           12 ISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        12 I~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +.|.|+|+++|.+||+++||+++..+..  .+....+++..+ +..+.+...
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~   55 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-DSVLMLADE   55 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-CEEEEEecC
Confidence            4689999999999999999999875432  222344556665 456776643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.20  E-value=1.4e-05  Score=48.55  Aligned_cols=48  Identities=19%  Similarity=0.146  Sum_probs=33.8

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654           12 ISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        12 I~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      -.|.|+|+++|++||+++|||++....  +.+....+.+.++ +..+.+..
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-~~~~~l~~   52 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-DGGVMVGS   52 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-CEEEEEec
Confidence            368999999999999999999987543  2222334566765 44565544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.16  E-value=8.6e-06  Score=51.90  Aligned_cols=47  Identities=21%  Similarity=0.363  Sum_probs=35.4

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEec
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNL   50 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~   50 (86)
                      ++...+.|..|.|+|++++++||+++||++.......++...+.+..
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~   51 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPA   51 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEEC
Confidence            34468999999999999999999999999986553333344455543

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.13  E-value=2.3e-05  Score=55.23  Aligned_cols=50  Identities=20%  Similarity=0.478  Sum_probs=39.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      -+.|.||.|.|.|++++.+||+++|||++..+.    ....|+..|+ ..-|+..
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~----~~A~F~a~G~-YHHHia~  215 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARG----PSALFLASGD-YHHHLAA  215 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecC----CcceEEecCC-cceeEEE
Confidence            467999999999999999999999999998773    2457888864 4444443

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.13  E-value=1.6e-05  Score=47.64  Aligned_cols=46  Identities=15%  Similarity=0.255  Sum_probs=31.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC--CcEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG--AFALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~--~~~l~L~~   60 (86)
                      +..|.|+|+++|++||+++|||+.....+    ..+++..++  ...+++..
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~   50 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG----WIATFASPQNMTVQVSLAT   50 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC----ceEEEeecCCCCcEEEEec
Confidence            34689999999999999999999864321    234444322  35566653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.06  E-value=2.3e-05  Score=49.53  Aligned_cols=30  Identities=23%  Similarity=0.411  Sum_probs=26.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      -+-|.+|.|+|++++++||.++||+++..+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRs   33 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRS   33 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccc
Confidence            457999999999999999999999998544

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.05  E-value=2.7e-05  Score=56.31  Aligned_cols=54  Identities=19%  Similarity=0.231  Sum_probs=39.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-CCCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +++||.|.|+|++++++||++.|||+..... .........+..| ++.|.|.+..
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G-~~~l~L~~~~   56 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQG-QINFVLTAPY   56 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeC-CEEEEEecCC
Confidence            7899999999999999999999999987652 1111223334554 5778887543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.03  E-value=2.1e-05  Score=47.90  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=32.4

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654           12 ISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        12 I~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ..|.|+|+++|++||++ |||++..+.+    ..+++..+ +..+.|..
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~l~~~-~~~l~l~~   47 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND----NLAYFRLG-NCAFYLQD   47 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC----CEEEEEcC-CEEEEeec
Confidence            46889999999999988 9999976542    45778875 45666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.01  E-value=2.1e-05  Score=58.34  Aligned_cols=57  Identities=16%  Similarity=0.167  Sum_probs=42.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------CCceeEEEEecCC-CcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------FGEFKVIWLNLPG-AFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------~~~~~~~~l~~~~-~~~l~L~~~~   62 (86)
                      +.+||||++.|+|++.++.||+++|||+......       ..+.....+..++ .+.|.|.+..
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~  242 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPT  242 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCC
Confidence            6789999999999999999999999998864321       1124555666543 4788888764

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=97.96  E-value=2.1e-05  Score=46.51  Aligned_cols=24  Identities=33%  Similarity=0.621  Sum_probs=22.3

Q ss_pred             EEeCCHHHHHHHHHHhhCCeEeee
Q 037654           14 RESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus        14 i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      |.|+|+++|++||+++|||++...
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~   24 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFD   24 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEE
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEe
Confidence            689999999999999999999874

...

>PLN02300 lactoylglutathione lyase

Probab=97.84  E-value=0.00016  Score=50.70  Aligned_cols=44  Identities=16%  Similarity=0.376  Sum_probs=33.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNL   50 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~   50 (86)
                      ..+.|+.|.|+|++++.+||+++|||+......  ..+....++..
T Consensus       153 ~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~  198 (286)
T PLN02300        153 EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY  198 (286)
T ss_pred             CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEec
Confidence            578999999999999999999999999864321  12244455543

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.79  E-value=5.2e-05  Score=49.65  Aligned_cols=53  Identities=15%  Similarity=0.179  Sum_probs=30.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEecC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |||+.+.|+|++++.++|++.|||++....  ...+.....+.++++ .|||+..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeC
Confidence            799999999999999999889999987542  221244455555655 89999854

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=97.28  E-value=0.0022  Score=42.45  Aligned_cols=54  Identities=20%  Similarity=0.279  Sum_probs=41.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCce-eEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEF-KVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~-~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++||||.|+|+.++.+-.++ +|.+....+..+.. ..+|+.-.++..|+|...
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            4899999999999999998887 88886666655544 556766556677887643

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=97.15  E-value=0.00066  Score=43.30  Aligned_cols=29  Identities=17%  Similarity=0.336  Sum_probs=24.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +.--|+|.|+|+++|++||.. |||+.-..
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq   31 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQ   31 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCC
Confidence            345689999999999999997 99997443

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.14  E-value=0.00057  Score=48.10  Aligned_cols=30  Identities=23%  Similarity=0.423  Sum_probs=27.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~   36 (86)
                      .+.-|+.+.|.|.+++++||+++|||++..
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLR   45 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLR   45 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeee
Confidence            578899999999999999999999999864

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.11  E-value=0.00075  Score=47.52  Aligned_cols=54  Identities=9%  Similarity=0.245  Sum_probs=36.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC-CCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP-GAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~-~~~~l~L~~~~~   63 (86)
                      .+-.|.|+|.|+++|++||++.|||++.+..+.  ...+.+.-+ ++..|+|....+
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek--~t~~~mgYgd~q~~LElt~~~~  203 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEK--YTRARMGYGDEQCVLELTYNYD  203 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhhh--hhhhhhccCCcceEEEEEeccC
Confidence            456799999999999999999999998763221  111222222 246677765443

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=97.04  E-value=0.0053  Score=37.97  Aligned_cols=49  Identities=18%  Similarity=0.157  Sum_probs=33.2

Q ss_pred             EEEEe-CCHHHHHHHHHHhhCCeEeeeCC------------CCceeEEEEecCCCcEEEEEec
Q 037654           12 ISRES-SDIRRLADFYKEIFGFEEIEAPN------------FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        12 I~i~V-~Dl~~s~~FY~~vLG~~~~~~~~------------~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ..|.+ .|.+++++||+++||+++.....            .+..-.+.+.+++ ..|.+...
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g-~~l~~~d~   64 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG-QRLMASDG   64 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC-EEEEEEcC
Confidence            35777 89999999999999999864321            1223456677764 46666543

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=97.03  E-value=0.00065  Score=49.80  Aligned_cols=27  Identities=33%  Similarity=0.603  Sum_probs=24.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeE
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEE   34 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~   34 (86)
                      ..-||+|.|+|+++|++||+.+|||..
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC
Confidence            345999999999999999999999985

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.02  E-value=0.0058  Score=37.85  Aligned_cols=53  Identities=15%  Similarity=0.228  Sum_probs=39.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|+|++++.+-.++ .|.+....+  ...+.+.+|+.-.++..|+|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4688999999999999998887 688876432  1122566777766678899886

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=96.97  E-value=0.0094  Score=39.95  Aligned_cols=60  Identities=13%  Similarity=0.325  Sum_probs=44.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC-ceeEEEEecCCCcEEEEEecCCCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG-EFKVIWLNLPGAFALHLIERNPGTKL   67 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~l~~~~~~~l~L~~~~~~~~~   67 (86)
                      .++.|+++.|.|++++.+..++ .|.++...+..+ ....+|+.-.++..|+|++..+...+
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~~~~~~  180 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGGI  180 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCccCCceeEEEEECCCCCEEEEEECCCchhh
Confidence            3799999999999999998876 788876544322 23456766666789999987765433

>PLN02367 lactoylglutathione lyase

Probab=96.96  E-value=0.0097  Score=41.49  Aligned_cols=58  Identities=17%  Similarity=0.381  Sum_probs=44.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCc-eeEEEEecCCCcEEEEEecCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGE-FKVIWLNLPGAFALHLIERNPGT   65 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~-~~~~~l~~~~~~~l~L~~~~~~~   65 (86)
                      .+++||+|.|.|++++.+-.++ .|.+++..+..+. ...+|+.-.++..|+|++.....
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCCceEEEEEECCCCCEEEEEeccccc
Confidence            3799999999999999999876 8999876553321 34567776678899999866543

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=96.91  E-value=0.0053  Score=38.92  Aligned_cols=38  Identities=18%  Similarity=0.211  Sum_probs=27.9

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      .+=.|.|.|-+...+||+++|||+...+..    ..++|...
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn----a~a~lg~~   39 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN----ALAILGDQ   39 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET----TEEEEE-T
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc----cEEEecCC
Confidence            356799999999999999999999976542    46677653

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=96.73  E-value=0.03  Score=34.80  Aligned_cols=56  Identities=16%  Similarity=0.162  Sum_probs=42.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC--CceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF--GEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.|+|++++.+-.++ .|.+++..+..  .+.+.++++-.++..|+++++..
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            4688999999999998877765 78888755432  33567777777788999998654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=96.65  E-value=0.028  Score=36.29  Aligned_cols=62  Identities=18%  Similarity=0.324  Sum_probs=40.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCCCceeEEEEecCCCcEEEEEecCCCCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP   68 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~~~~~~   68 (86)
                      .+++|+++.|.|.+...++|+.+.  |.++...........+|+.-.++..|++....+.....
T Consensus        64 ~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~~~~~~~  127 (157)
T cd08347          64 GTVHHVAFRVPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDGPGFTVD  127 (157)
T ss_pred             CceEEEEEECCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECCCCcccc
Confidence            468999999999666666666665  76543222222244567776668899998765444333

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=96.51  E-value=0.022  Score=34.03  Aligned_cols=52  Identities=23%  Similarity=0.291  Sum_probs=37.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---CCceeEEEEecCC--CcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN---FGEFKVIWLNLPG--AFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~~~~~~~~l~~~~--~~~l~L~   59 (86)
                      .++.|+++.|.|++++.+..++ .|.++...+.   .++...+|+.-.+  +..|+++
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~  127 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELV  127 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccCCCccCCCCEEEEEecCCCceEEEEec
Confidence            4688999999999999988876 6888765432   2334566777655  6777775

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=96.41  E-value=0.041  Score=33.24  Aligned_cols=53  Identities=17%  Similarity=0.271  Sum_probs=37.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.|++++.+--++ .|.++....  ...+...+|+.-.++..|++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            3678999999999998886665 688865321  1122456777766678888875

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=96.40  E-value=0.046  Score=33.79  Aligned_cols=56  Identities=16%  Similarity=0.116  Sum_probs=40.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++|+++.|.|++...+.|..+  .|.++...+.   .++....|+.-.++..|++....
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            57999999999999999999988  5777643321   12123356666667889998543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK10291 glyoxalase I; Provisional

Probab=96.23  E-value=0.058  Score=32.93  Aligned_cols=56  Identities=14%  Similarity=0.235  Sum_probs=38.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--C-CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--N-FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~-~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.|.|++++.+--++ .|.++...+  . .+....+|+.-.++..|+|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999988777765 788765322  1 222345666656678999998653

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=96.22  E-value=0.016  Score=38.42  Aligned_cols=28  Identities=18%  Similarity=0.258  Sum_probs=18.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEe
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEI   35 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~   35 (86)
                      .++|..+.|+|+.+|..||.+++|+.+.
T Consensus        22 ~~~~t~~rvkd~~~Sl~fytr~~gm~l~   49 (170)
T KOG2944|consen   22 LLQQTMLRVKDPTGSLKFYTRVNGMALL   49 (170)
T ss_pred             hhhhceeecccchhhhhhhhhhccceee
Confidence            4566666666666666666666666653

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.95  E-value=0.072  Score=34.29  Aligned_cols=46  Identities=30%  Similarity=0.421  Sum_probs=31.7

Q ss_pred             EEEeC-CHHHHHHHHHHhhCCeEeeeCCC------------CceeEEEEecCCCcEEEEE
Q 037654           13 SRESS-DIRRLADFYKEIFGFEEIEAPNF------------GEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus        13 ~i~V~-Dl~~s~~FY~~vLG~~~~~~~~~------------~~~~~~~l~~~~~~~l~L~   59 (86)
                      .|.++ |.+++++||+++||.++..+-..            +..-.+-|.+++ ..|.+.
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g-~~im~s   63 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGG-STIMLS   63 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECC-EEEEEe
Confidence            57788 99999999999999998654221            224456677763 445443

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=95.90  E-value=0.074  Score=34.29  Aligned_cols=57  Identities=14%  Similarity=0.163  Sum_probs=40.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC------CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP------NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~------~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.|+++.|.|+++..+..++ .|.++....      .......+|+.-.++..|+|+++...
T Consensus        92 ~g~~Hla~~v~dida~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        92 TGVFHFCVQDPDVEGLAERIVA-AGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             ccceEEEEEcCCHHHHHHHHHH-cCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            4688999999999999998887 576543211      11113566777666889999987654

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=95.88  E-value=0.12  Score=31.53  Aligned_cols=58  Identities=28%  Similarity=0.410  Sum_probs=39.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.|+++.|.|.+...++|..+.  |.++......+....+++.-.++..++++...+.
T Consensus        64 ~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          64 AGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcCCC
Confidence            478899999999999888888875  6665433222223445555556788999865543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=95.78  E-value=0.22  Score=31.45  Aligned_cols=57  Identities=11%  Similarity=0.156  Sum_probs=39.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      -.+++|+++.|.|.+...++|+.+  .|.++...+.   .+.....|+.-.++..|++....
T Consensus        54 ~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          54 SSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence            358999999999988777777776  4776654331   12234457776667888887544

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.76  E-value=0.084  Score=31.16  Aligned_cols=52  Identities=21%  Similarity=0.285  Sum_probs=35.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+++|+++.|.|++++.+.-++ .|.++...+  ...+...+++.-.++..++++
T Consensus        71 ~g~~h~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~  124 (125)
T cd08352          71 CGLRHLAFSVEDIEAAVKHLKA-KGVEVEPIRVDEFTGKRFTFFYDPDGLPLELY  124 (125)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCccccccccCCCceEEEEEECCCCCEEEec
Confidence            4788999999999997777665 687765432  122234556665566777775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=95.58  E-value=0.13  Score=32.34  Aligned_cols=55  Identities=18%  Similarity=0.396  Sum_probs=39.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.|++++.+...+ .|.++...+   ..+....+|+.-.++..++|++..
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            3688999999999999998876 888775433   112233556665667889998755

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=95.50  E-value=0.15  Score=32.39  Aligned_cols=56  Identities=14%  Similarity=0.111  Sum_probs=38.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++||++.|.|++++.+.|..+  .|.++...+.   .+....+|+.-.++..|+|+...
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            57999999999999998777665  5777654332   12123456665667889988543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=95.45  E-value=0.086  Score=39.41  Aligned_cols=29  Identities=14%  Similarity=0.153  Sum_probs=26.9

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      ++||.++|.|..++..||+..|||+.+..
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~   29 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAK   29 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEee
Confidence            68999999999999999999999998754

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.36  E-value=0.026  Score=33.88  Aligned_cols=30  Identities=20%  Similarity=0.354  Sum_probs=26.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .+++||++.|+|++++.+-.++ .|+++..+
T Consensus        67 ~gi~Hia~~v~D~d~~~~~l~~-~G~~~~~~   96 (109)
T PF13669_consen   67 GGIHHIAFEVDDLDAAIARLEA-QGFRVLDE   96 (109)
T ss_dssp             SEEEEEEEEESHHHHHHHHHHH-TTECEEEC
T ss_pred             CCEEEEEEEeCCHHHHHHHHHH-CCCEEccc
Confidence            5899999999999999999998 69998654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=95.34  E-value=0.02  Score=41.88  Aligned_cols=32  Identities=25%  Similarity=0.354  Sum_probs=29.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEee
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~   36 (86)
                      ++.+++||.+.|.|...+..||+..|||+...
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A   45 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLA   45 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchh
Confidence            47899999999999999999999999999864

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=95.30  E-value=0.22  Score=31.69  Aligned_cols=57  Identities=12%  Similarity=0.216  Sum_probs=39.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+++|+++.|.|.+...+++..+  .|.++...+.   .+....+|+.-.++..|+++....
T Consensus        72 ~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          72 KRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             ceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            57899999999988877777665  6877654332   122345666666778899876543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=95.13  E-value=0.23  Score=31.31  Aligned_cols=55  Identities=13%  Similarity=-0.006  Sum_probs=36.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|+++..+.+..+  .|.++...+.   .+....+|+.-.++..|+|+..
T Consensus        66 ~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          66 GKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             CCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            46899999999999877666664  5777654331   1112345666556788999753

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=95.01  E-value=0.14  Score=30.61  Aligned_cols=53  Identities=30%  Similarity=0.445  Sum_probs=34.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee-CCC--CceeEEEEe--cCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA-PNF--GEFKVIWLN--LPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~-~~~--~~~~~~~l~--~~~~~~l~L~~   60 (86)
                      .++.|+++.|.|++++.+..++ .|.+++.. +..  .+...+|+.  -.++..|++++
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            4678999999999998887765 68887543 221  223455662  23467777753

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.83  E-value=0.27  Score=28.56  Aligned_cols=52  Identities=19%  Similarity=0.122  Sum_probs=35.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-CCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+..|+++.|.|++++.+--.+ .|+++...+ ........++.-.++..|++.
T Consensus        66 ~~~~~~~~~v~di~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  118 (119)
T cd07263          66 GGTPGLVLATDDIDATYEELKA-RGVEFSEEPREMPYGTVAVFRDPDGNLFVLV  118 (119)
T ss_pred             CCceEEEEEehHHHHHHHHHHh-CCCEEeeccccCCCceEEEEECCCCCEEEEe
Confidence            4678999999999998888876 898876543 222123445554456677764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=94.82  E-value=0.42  Score=30.13  Aligned_cols=58  Identities=19%  Similarity=0.332  Sum_probs=39.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC---CCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN---FGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .+++|+++.|.|++...+++..+-  |.++...+.   .+....+|+.-.++..|++++....
T Consensus        58 ~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~  120 (144)
T cd07239          58 PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQ  120 (144)
T ss_pred             CceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceE
Confidence            468899999999999998888775  555543321   1112345666556788998865443

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.64  E-value=0.47  Score=28.20  Aligned_cols=55  Identities=15%  Similarity=0.300  Sum_probs=38.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC----CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|.+...++|+++-  |.++...+.    .+.....|+.-.++..|+++..
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          57 GGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            478999999999877777777765  777654321    1112446777667788888763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.62  E-value=0.45  Score=28.07  Aligned_cols=52  Identities=10%  Similarity=0.135  Sum_probs=30.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC--CCceeEEEEecCCCcEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN--FGEFKVIWLNLPGAFALHL   58 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~--~~~~~~~~l~~~~~~~l~L   58 (86)
                      .++.|+++.|.|.+...++|+.+  .|.++...+.  ..+...+++.-.++..|++
T Consensus        69 ~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~  124 (125)
T cd07241          69 TGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEI  124 (125)
T ss_pred             CceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEe
Confidence            47799999998766666666665  5777654331  1112223444334556654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=94.62  E-value=0.43  Score=28.12  Aligned_cols=51  Identities=18%  Similarity=0.349  Sum_probs=34.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCCcEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGAFALHL   58 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~~~l~L   58 (86)
                      .++.|+++.|.|++++.+-..+ .|.++...+.. .....+|+.-.++..|++
T Consensus        69 ~~~~~i~~~v~did~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~  120 (121)
T cd07233          69 NGFGHLAFAVDDVYAACERLEE-MGVEVTKPPGDGGMKGIAFIKDPDGYWIEL  120 (121)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEEeeCCccCCCceEEEEECCCCCEEEe
Confidence            3678999999999998776664 78887655432 223445555445666665

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=94.51  E-value=0.05  Score=40.07  Aligned_cols=31  Identities=26%  Similarity=0.649  Sum_probs=27.8

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhhCCeEee
Q 037654            6 GATLNHISRESS--DIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         6 i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~   36 (86)
                      +..|+|++..|.  .++....||+++|||+...
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~  197 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQ  197 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCcccee
Confidence            468999999997  7999999999999999854

>PRK10148 hypothetical protein; Provisional

Probab=94.49  E-value=0.39  Score=30.82  Aligned_cols=24  Identities=13%  Similarity=0.212  Sum_probs=20.3

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCeEe
Q 037654           12 ISRESS-DIRRLADFYKEIFGFEEI   35 (86)
Q Consensus        12 I~i~V~-Dl~~s~~FY~~vLG~~~~   35 (86)
                      .-|..+ |.+++++||+++||.++.
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~   29 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELL   29 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEE
Confidence            356665 899999999999999875

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=94.47  E-value=0.63  Score=30.02  Aligned_cols=55  Identities=13%  Similarity=0.186  Sum_probs=35.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC---CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN---FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|.+...++|..+-  |.++...+.   ......+|+.-.++..|+++..
T Consensus        68 ~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          68 GRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            368999999999887777777664  666543321   1112234555556788998876

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.42  E-value=0.59  Score=27.95  Aligned_cols=54  Identities=19%  Similarity=0.383  Sum_probs=34.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC-----CCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN-----FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~-----~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.|.+...+.++.+.  |.++...+.     .+....+++.-.++..++++.
T Consensus        67 ~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          67 PGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             cCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            468999999987665556666554  777654332     122345555545577888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=94.22  E-value=0.72  Score=28.10  Aligned_cols=58  Identities=14%  Similarity=0.172  Sum_probs=39.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.|+++.|.|.+...++|+.+  .|.++...+.   .+....+++.-.++..|++......
T Consensus        58 ~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          58 PGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             CCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence            57899999999998777777665  4777654332   1223445666566788998865443

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.94  E-value=0.41  Score=28.22  Aligned_cols=52  Identities=15%  Similarity=0.222  Sum_probs=29.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCCCceeEEEEecCCCcEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPNFGEFKVIWLNLPGAFALHL   58 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~~~~~~~~l~~~~~~~l~L   58 (86)
                      .+++|+++.|.|.+...+.|..+.  |.++............++.-.++..+++
T Consensus        72 ~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~  125 (126)
T cd08346          72 GQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLEL  125 (126)
T ss_pred             CcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEe
Confidence            357899999997755555666554  6554322111223444555445566665

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=93.85  E-value=0.78  Score=27.20  Aligned_cols=54  Identities=20%  Similarity=0.163  Sum_probs=37.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|.++..+..+ .+|........ ......+|+.-.++..|+|+..
T Consensus        56 ~~~~~~af~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          56 ARFVGAAFEAASRADLEKAAA-LPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CcccEEEEEECCHHHHHHHHH-cCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence            468899999999998888754 57887653321 1113456776666788888754

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.55  E-value=0.9  Score=26.96  Aligned_cols=57  Identities=14%  Similarity=0.196  Sum_probs=36.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIF--GFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ..++.|+++.|.|.+...++|.++.  |.+............+|+.-.++..+++....
T Consensus        62 ~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          62 ATGLYHFAILLPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            3578899999998777777776665  66543222212124456665667888887543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=93.54  E-value=0.036  Score=34.09  Aligned_cols=23  Identities=30%  Similarity=0.638  Sum_probs=10.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFG   31 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG   31 (86)
                      .+.-|.|+|.| +++++||+++||
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~   27 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFG   27 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccc
Confidence            56789999999 889999999886

>PRK06724 hypothetical protein; Provisional

Probab=93.50  E-value=0.99  Score=28.03  Aligned_cols=55  Identities=13%  Similarity=0.196  Sum_probs=35.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC----C-CceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN----F-GEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~----~-~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+.+|+++.|.+.+..-++++.+  .|.++...+.    . .+...+++.-.++..|++...
T Consensus        62 ~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         62 LGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             CCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            36899999997666666666666  6877654331    1 223445555556788888755

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.35  E-value=0.84  Score=26.92  Aligned_cols=49  Identities=10%  Similarity=0.073  Sum_probs=33.8

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCC--CceeEEEEecCCCcEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNF--GEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~l~~~~~~~l~L~~   60 (86)
                      |+++.|.|+++..+..++ .|.++...+..  .+...+++.-.++..+++++
T Consensus        69 ~~~~~v~did~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          69 ILNFEVDDVDAEYERLKA-EGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             EEEEEECCHHHHHHHHHh-cCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            999999999999988887 68876543321  11345566655567777753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=93.21  E-value=0.93  Score=26.11  Aligned_cols=51  Identities=22%  Similarity=0.331  Sum_probs=34.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+..|+++.|.|+++..+..++ +|.++...+   ..+ ...+++.-.++..|+++
T Consensus        55 ~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   55 GGGFHLCFEVEDVDALYERLKE-LGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SSEEEEEEEESHHHHHHHHHHH-TTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             CceeEEEEEEcCHHHHHHHHHH-CCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            4678999999999999998887 799875432   222 34555554456667653

...

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=93.00  E-value=1.1  Score=26.19  Aligned_cols=54  Identities=19%  Similarity=0.216  Sum_probs=33.1

Q ss_pred             ceeeEEEEEeCC---HHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSD---IRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~D---l~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .++.|+++.|.|   +++..+..++ .|.+....+  .......+++.-.++..++++..
T Consensus        56 ~~~~h~~~~v~~~~~v~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          56 PGVDALGFEVASEEDLEALAAHLEA-AGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCceeEEEEcCCHHHHHHHHHHHHH-cCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            468999999985   5555554544 587765443  22222444555455778888754

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.99  E-value=0.6  Score=26.61  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=31.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCCcEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGAFALH   57 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~~~l~   57 (86)
                      .+..|+++.|+|++++.+=.++ .|.++...+.. .+...+++.-.++..++
T Consensus        63 ~~~~~~~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~DP~G~~iE  113 (114)
T cd07245          63 GRDDHIAFRVDDLDAFRARLKA-AGVPYTESDVPGDGVRQLFVRDPDGNRIE  113 (114)
T ss_pred             cccceEEEEeCCHHHHHHHHHH-cCCCcccccCCCCCccEEEEECCCCCEEe
Confidence            4678999999999998877776 68887654321 11233444433455554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=92.72  E-value=0.83  Score=25.57  Aligned_cols=30  Identities=20%  Similarity=0.190  Sum_probs=23.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .+..|+++.|.|++++.+-..+ .|..+...
T Consensus        60 ~~~~~~~~~v~~~~~~~~~l~~-~g~~~~~~   89 (112)
T cd06587          60 GGGVHLAFEVDDVDAAYERLKA-AGVEVLGE   89 (112)
T ss_pred             CCeeEEEEECCCHHHHHHHHHH-cCCcccCC
Confidence            5688999999999877776665 67776543

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.60  E-value=1.2  Score=26.02  Aligned_cols=53  Identities=15%  Similarity=0.238  Sum_probs=34.7

Q ss_pred             ceeeEEEEEeCC-HHHHHHHHHHhhCCeEeeeCC--C---CceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSD-IRRLADFYKEIFGFEEIEAPN--F---GEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~D-l~~s~~FY~~vLG~~~~~~~~--~---~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.+ ++++.+.+++ .|.++...+.  .   +....+++.-.++..+++.+
T Consensus        66 ~~~~hi~~~~~~~~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          66 PGSDDLCLITEPPIDELVAHLEA-HGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             CCCceEEEEecccHHHHHHHHHH-CCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            468899999975 9998888777 6887654321  1   11234455545567777754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=92.57  E-value=1.3  Score=26.29  Aligned_cols=55  Identities=18%  Similarity=0.279  Sum_probs=33.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.+.+...++++.+  .|.++...+.   .+....+|+.-.++..|+++..
T Consensus        60 ~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          60 AGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            36789999998544444444443  6777654321   1112456666556788888754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=92.38  E-value=0.26  Score=31.79  Aligned_cols=55  Identities=13%  Similarity=0.137  Sum_probs=35.6

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ++|.+.+++||-+.|.|-+++..+++ .|||+.+.+-...  ....++-| ++.|.|-.
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk--~v~l~rQG-~I~~vln~   57 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK--DVTLYRQG-DINFVLNS   57 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC--SEEEEEET-TEEEEEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc--ceEEEEeC-CEEEEEeC
Confidence            46778999999999999777777775 6999997654322  23333543 56665544

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=92.37  E-value=1.2  Score=27.55  Aligned_cols=55  Identities=15%  Similarity=0.163  Sum_probs=36.5

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++|+++.+.  |+++..+..++ .|.++...+.  ......+|+.-.++..|+|.+..
T Consensus        62 ~~~~hiaf~v~~~dv~~~~~~l~~-~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         62 QSYTHIAFSIEEEDFDHWYQRLKE-NDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             CCeeEEEEEecHHHHHHHHHHHHH-CCceEcCCccccCCCceEEEEECCCCCEEEEEeCC
Confidence            35789999997  77777776665 6887653321  11245667776667889887654

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=92.00  E-value=1.4  Score=26.99  Aligned_cols=54  Identities=24%  Similarity=0.279  Sum_probs=33.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC--CCCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEI--FGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +++|+++.|++ +...++|..+  .|.++....  ..+....+|+.-.++..+++....
T Consensus        66 ~~~Hiaf~v~~-~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          66 TYNHIAFKISD-SDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             CceEEEEEcCH-HHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCC
Confidence            58999999984 4445555555  576654221  122234566665667888887544

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.89  E-value=1.4  Score=25.89  Aligned_cols=53  Identities=13%  Similarity=0.121  Sum_probs=31.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC-CCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN-FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~-~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.+ +...++|+++.  |.++..... ......+++.-.++..+++++
T Consensus        66 ~~~~~~~~~v~~-~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          66 SGPGHFAFAIPA-EELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             CCccEEEEEcCH-HHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEec
Confidence            478999999965 55555566654  555543221 112344555555577788764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.86  E-value=1.6  Score=25.52  Aligned_cols=53  Identities=13%  Similarity=0.149  Sum_probs=35.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC--CceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNF--GEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ...|+++.|.|++++.+-.++ .|.++...+..  .+...+++.-.++..|+++++
T Consensus        57 ~~~~i~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          57 VVPDLSIEVDDVDAALARAVA-AGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             CCCEEEEEeCCHHHHHHHHHh-cCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            356999999999999887765 78887654321  113445555455678888754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=91.58  E-value=1.9  Score=25.88  Aligned_cols=53  Identities=19%  Similarity=0.233  Sum_probs=34.8

Q ss_pred             eeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC---------CCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESS--DIRRLADFYKEIFGFEEIEAPN---------FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~---------~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +..|+++.|+  |+++..+..++ .|.+....+.         ..+....|+.-.++..|++++.
T Consensus        58 ~~~h~a~~v~~~dl~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          58 PPQHYAFLVSEEEFDRIFARIRE-RGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CcceEEEEeCHHHHHHHHHHHHH-cCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            4689999887  57777777776 5887643221         1123555666556788998875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.40  E-value=1.8  Score=25.63  Aligned_cols=52  Identities=12%  Similarity=0.224  Sum_probs=33.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCC-----CceeEEEEecCCCcEEEEE
Q 037654            8 TLNHISRESSDIRRLADFYKEIF--GFEEIEAPNF-----GEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~-----~~~~~~~l~~~~~~~l~L~   59 (86)
                      +..|+++.|.|.+...++|..+.  |.++...+..     .....+++.-.++..++++
T Consensus        64 ~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          64 NGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            46799999999888888887754  5554433211     1123456665567777775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=90.92  E-value=2.2  Score=25.37  Aligned_cols=54  Identities=20%  Similarity=0.142  Sum_probs=33.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC-CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAP-NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~-~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+++|+++.|.|.+...++++.+  .|.++.... ..+....+|+.-.++..|+++.
T Consensus        61 ~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  117 (121)
T cd09013          61 AGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYW  117 (121)
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEE
Confidence            47899999999877777777665  466543211 1111234556555678888875

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=89.60  E-value=2  Score=24.98  Aligned_cols=54  Identities=22%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeC-C-CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAP-N-FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~-~-~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.  |+++..+-.++ .|.++.... . ......+|+.-.++..++++..
T Consensus        54 ~~~~hiaf~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          54 RTYTHIAFQIQSEEFDEYTERLKA-LGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             CCccEEEEEcCHHHHHHHHHHHHH-cCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            35789999996  45554444444 577764321 1 1113455666556788888753

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=89.19  E-value=3  Score=24.28  Aligned_cols=52  Identities=13%  Similarity=0.010  Sum_probs=34.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~   59 (86)
                      ....|+++.|+|+++..+-..+ .|.++...+.  .+.....|+.-.++..++|+
T Consensus        60 ~~~~~~~f~v~di~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~  113 (114)
T cd07247          60 PPGWLVYFAVDDVDAAAARVEA-AGGKVLVPPTDIPGVGRFAVFADPEGAVFGLW  113 (114)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEEEeCCcccCCcEEEEEEECCCCCEEEeE
Confidence            3567999999999988877766 6887764432  11234455555556677765

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=88.98  E-value=3.2  Score=24.44  Aligned_cols=54  Identities=17%  Similarity=0.172  Sum_probs=33.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC---CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAP---NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.+.+...++|+.+  .|.++...+   ..+....+++.-.++..++++.
T Consensus        59 ~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  117 (121)
T cd07266          59 AGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYA  117 (121)
T ss_pred             CceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEe
Confidence            47899999998777666777665  477764331   1121234444444577888874

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=88.93  E-value=0.75  Score=30.58  Aligned_cols=30  Identities=23%  Similarity=0.259  Sum_probs=25.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .++.||++.|+|++++.+-.++ -|.+.+..
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~-~Gv~~l~~  111 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRA-RGVEFLPI  111 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHH-cCCeeccC
Confidence            5799999999999999998876 68877543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG4657 consensus Uncharacterized conserved protein [Function unknown]

Probab=88.64  E-value=2  Score=30.12  Aligned_cols=34  Identities=26%  Similarity=0.412  Sum_probs=23.1

Q ss_pred             CHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654           18 DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus        18 Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      |+.+++.||.+.||+++..--+.- ..++|-.++.
T Consensus       146 ~~~e~a~wy~dyLGleie~~hgev-ikfiFTnIdp  179 (246)
T KOG4657|consen  146 DIHEAASWYNDYLGLEIEAGHGEV-IKFIFTNIDP  179 (246)
T ss_pred             ccHHHHHHHHHhcCceeeeccCce-EEEEEeccCC
Confidence            678889999999999986432211 4556655533

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=88.29  E-value=3.2  Score=25.40  Aligned_cols=57  Identities=18%  Similarity=0.233  Sum_probs=33.7

Q ss_pred             ceeeEEEEEeCC--HHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSD--IRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~D--l~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .+++|+++.|.+  +++..+-.++ .|.++...+  .......+|+.-.++..|++......
T Consensus        58 ~~~~hiaf~v~~~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~~~  118 (131)
T cd08363          58 QSYTHIAFTIEDSEFDAFYTRLKE-AGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGTLA  118 (131)
T ss_pred             ccceEEEEEecHHHHHHHHHHHHH-cCCcccCCCccccCcceEEEEECCCCCEEEEecCcHH
Confidence            367899999975  5444444443 466654321  11123455666556788999876543

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=88.20  E-value=0.9  Score=29.45  Aligned_cols=25  Identities=12%  Similarity=0.171  Sum_probs=22.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhh
Q 037654            6 GATLNHISRESSDIRRLADFYKEIF   30 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vL   30 (86)
                      ..+|.+|.|.++|.+++.++|.++|
T Consensus       151 ~~~i~~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  151 ALGITRVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             TEEEEEEEEEETTHHHHHHHHHHH-
T ss_pred             cceEEEEEEEeCCHHHHHHHHHhhC
Confidence            5689999999999999999999976

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.91  E-value=4.1  Score=24.28  Aligned_cols=52  Identities=13%  Similarity=0.111  Sum_probs=33.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC-CCceeEEEEecCCCcEEEEE
Q 037654            8 TLNHISRESSDIRRLADFYKEIF--GFEEIEAPN-FGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~-~~~~~~~~l~~~~~~~l~L~   59 (86)
                      +..|+++.|.|.+...++|+.+.  |.++...+. ......+++.-.++..|+++
T Consensus        68 ~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~  122 (124)
T cd09012          68 TEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVL  122 (124)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEE
Confidence            35699999999888888888875  666554332 11123345555556777775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=87.28  E-value=3.6  Score=24.49  Aligned_cols=55  Identities=16%  Similarity=0.157  Sum_probs=33.6

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.+.  |+++..+-.++ .|.++...+... ....|+.-.++..++++...-
T Consensus        56 ~~~~hi~f~v~~~dl~~~~~~l~~-~G~~~~~~~~~~-~~~~~f~DPdG~~ie~~~~~~  112 (121)
T cd07244          56 KDYTHYAFSVSEEDFASLKEKLRQ-AGVKEWKENTSE-GDSFYFLDPDGHKLELHVGSL  112 (121)
T ss_pred             CCeeeEEEEeCHHHHHHHHHHHHH-cCCcccCCCCCC-ccEEEEECCCCCEEEEEeCCH
Confidence            46889999994  45555555544 477654332211 245566655678888886543

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF15067 FAM124: FAM124 family

Probab=87.15  E-value=2  Score=30.14  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=23.7

Q ss_pred             eeEEEEEeC--CHHHHHHHHHHhhCCeEee
Q 037654            9 LNHISRESS--DIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         9 i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~   36 (86)
                      +--++|+|+  |.+.+++||+-+|+=+...
T Consensus       129 ilRftly~~~~N~~d~vr~Yelil~~~~~~  158 (236)
T PF15067_consen  129 ILRFTLYCSFDNYEDMVRFYELILQREPTQ  158 (236)
T ss_pred             EEEEEEEecCCCHHHHHHHHHHHhccCcce
Confidence            445789998  9999999999999988743

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.14  E-value=5.1  Score=23.66  Aligned_cols=52  Identities=17%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEe
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      +..|+++.|.|+++..+--++.=|.+.+..+   ..+ .+.+|+.=.++..|++.+
T Consensus        64 ~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~  118 (120)
T cd09011          64 NNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGE  118 (120)
T ss_pred             CceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEec
Confidence            4569999999999998888773233444332   223 345566655567777754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.43  E-value=5.4  Score=23.22  Aligned_cols=53  Identities=11%  Similarity=-0.039  Sum_probs=33.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+..|+++.|.|++++.+-..+ .|.++...+.  ..+...+|+.-.++..++|.+
T Consensus        67 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          67 GTPVSLHLYVEDVDATFARAVA-AGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            3567999999999986665544 5887754331  122445666655567777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=85.28  E-value=7.4  Score=24.73  Aligned_cols=56  Identities=13%  Similarity=0.305  Sum_probs=34.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeE-e-eeCC---CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEE-I-EAPN---FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~-~-~~~~---~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++|+++.|.|.+...+.+..+  .|... . ..+.   ..+...+|+.-.++..|+++...
T Consensus        62 ~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          62 PRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            36889999999877777766655  35542 1 1121   11123456665667889987533

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=84.75  E-value=6  Score=23.22  Aligned_cols=49  Identities=18%  Similarity=0.198  Sum_probs=31.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEe
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      -|++|.|+|++++.+.-.+ .|.++...+   ..+ ....++.-.++..+++.+
T Consensus        73 ~~~~~~v~di~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVE-AGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCS  124 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHH-cCCEeccCCccCCCC-cEEEEEECCCCCEEEEec
Confidence            4899999999999777765 588765433   122 233444444456676654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=84.67  E-value=6  Score=23.16  Aligned_cols=52  Identities=19%  Similarity=0.236  Sum_probs=32.8

Q ss_pred             eeeEEEEE--eCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            8 TLNHISRE--SSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         8 ~i~HI~i~--V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      +++|+++.  +.|+++..+..++ .|.++...+.......+|+.-.++..++|..
T Consensus        55 ~~~~~~~~~~~~d~~~~~~~l~~-~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          55 RLAYLSFGIFEDDFAAFARHLEA-AGVALAAAPPGADPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             ceeeEEEEeEhhhHHHHHHHHHH-cCCceecCCCcCCCCEEEEECCCCCEEEEec
Confidence            45665554  5789998888876 6988754432111234566655677788764

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=84.04  E-value=6.4  Score=22.97  Aligned_cols=54  Identities=11%  Similarity=0.081  Sum_probs=33.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC----CCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIF--GFEEIEAPN----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ++.|+++.|.|.+...++|+.+.  |.+....+.    ..+...+++.-.++..|+|+..
T Consensus        58 ~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          58 RLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            57899999987666666766554  777653321    1112344555455678888754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=83.23  E-value=7.4  Score=23.10  Aligned_cols=55  Identities=18%  Similarity=0.099  Sum_probs=35.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC-----CCCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAP-----NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~-----~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .++.|+++.|.+.+...+++..+  .|.++...+     ..+....+|+.-.++..|+++..
T Consensus        56 ~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          56 DDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence            46889999998766555666554  677765432     11212456776666788888754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=82.26  E-value=7.2  Score=22.26  Aligned_cols=52  Identities=15%  Similarity=0.072  Sum_probs=32.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCe-EeeeCC--CCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFE-EIEAPN--FGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~-~~~~~~--~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+-.|+++.|.|+++..+-.++ +|.+ +...+.  ..+...+++.-.++..+++.
T Consensus        57 ~~~~~~~~~~~~~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~  111 (112)
T cd08349          57 GRGGSVYIEVEDVDALYAELKA-KGADLIVYPPEDQPWGMREFAVRDPDGNLLRFG  111 (112)
T ss_pred             CCcEEEEEEeCCHHHHHHHHHH-cCCcceecCccCCCcccEEEEEECCCCCEEEec
Confidence            3556899999999998888766 7887 332221  11224455554456677764

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=81.64  E-value=0.8  Score=33.73  Aligned_cols=34  Identities=12%  Similarity=0.337  Sum_probs=29.9

Q ss_pred             CccceeeEEEEEeC--CHHHHHHHHHHhhCCeEeee
Q 037654            4 NIGATLNHISRESS--DIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         4 m~i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +.+..++|+...++  .++.+.+||.+.|||...+.
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfws  209 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWS  209 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhccccccc
Confidence            56789999999999  58999999999999987543

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=81.11  E-value=9.5  Score=22.90  Aligned_cols=55  Identities=18%  Similarity=0.124  Sum_probs=32.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC-----CCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEI--FGFEEIEAPN-----FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~-----~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +..|+++.|.|.+...+.++.+  .|.++...+.     .+....+++.-.++..|+++..+
T Consensus        59 ~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          59 AEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            5679999998744444444443  5776543221     11123445565567788887654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-06
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-06
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	1e-05
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-05
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-05
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-05
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	9e-05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-04
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-04
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-04
1nki_A	135	Probable fosfomycin resistance protein; potassium	6e-04
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	9e-04

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 41.4 bits (97), Expect = 3e-06
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEI---EAPNFGEFKVIWLNLPGAFALHLIERNPGT 65
          L+H++    D+ R+    + +F   E+   +   F   +  +  +        +    G 
Sbjct: 5  LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGE 60

Query: 66 KLPEGPYSTTSPTADPSHL 84
          KL E  Y+  +   D +  
Sbjct: 61 KLAERSYNHIAFKIDDADF 79

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 1  MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE 60
          M ++    ++H+S    D+     +Y EI  ++E+              LPG  ++ L E
Sbjct: 1  MSLS---GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLRE 57

Query: 61 RNPGTKLPEGPYST 74
           + G          
Sbjct: 58 HDGGGTDLFDETRP 71

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 14/66 (21%), Positives = 20/66 (30%), Gaps = 5/66 (7%)

Query: 1  MPVNIGATLNHISRE--SSDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGAFALH 57
          M   I   ++H+              FY E  G EEI  P    +    W    G   +H
Sbjct: 4  MRNYIQG-IDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKC-GNQEIH 61

Query: 58 LIERNP 63
          +     
Sbjct: 62 IGVEQN 67

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 39.4 bits (92), Expect = 1e-05
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 7/57 (12%)

Query: 16 SSDIRRLADFYKEIFGFEEI-EAPNFGEFKVIWLNLPGAFALHLIERNPGTKLPEGP 71
            D++     + +  GFE      N+   ++          L L+E      +P+G 
Sbjct: 15 IPDMQEALTLFCDTLGFELKYRHSNYAYLEL------SGCGLRLLEEPARKIIPDGI 65

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP-GAFALHLIERNPGTKL 67
          ++H++  +S+ +   +FY E  GFE +   +  E   I L+L  G+  L +   +     
Sbjct: 6  IHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPAR 65

Query: 68 PEGP 71
          P  P
Sbjct: 66 PSYP 69

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
          + H++   +D+    +F ++ FG                +     F L L++      
Sbjct: 4  IKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAFAVMRDNDGFILTLMKGKEVQY 58

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 7/79 (8%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEI---EAPNFGEFKVIWLNLPGAFALHLIERNPGT 65
          L+HI+    D+ +   F + IF  EEI       F   K  +  + G      I    G 
Sbjct: 5  LSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG----LWICIMEGD 60

Query: 66 KLPEGPYSTTSPTADPSHL 84
           L E  Y+  +       +
Sbjct: 61 SLQERTYNHIAFQIQSEEV 79

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP 68
          LNH++   SD+++   F+ E+ G       N G     +L     +     +       P
Sbjct: 5  LNHLTLAVSDLQKSVTFWHELLGLTLHARWNTG----AYLTCGDLWVCLSYDEARQYVPP 60

Query: 69 EGP 71
          +  
Sbjct: 61 QES 63

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 7  ATLNHISRESSDIRRLADFYKEIFGFEEIEA---PNFGEFK--VIWLNLPGAFALHLIER 61
          A L++++  + DI  ++ FY+++FGF+EIE+   P F         +      A  L++ 
Sbjct: 7  ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQL 66

Query: 62 NPGTKLPEGPYSTTSPTADPSH 83
             ++     +           
Sbjct: 67 AQFSETSGIKFLLNFDVDTKEA 88

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 36.3 bits (84), Expect = 2e-04
 Identities = 6/37 (16%), Positives = 14/37 (37%), Gaps = 1/37 (2%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEI-EAPNFGEFK 44
          LN +    S++ ++    + I   +       F +F 
Sbjct: 6  LNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFT 42

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 12/69 (17%), Positives = 19/69 (27%), Gaps = 6/69 (8%)

Query: 8  TLNHISRESSDIRRLADFYKEIFGFEEIEA-PNFGEFKVIWLNLPGAFALHLIERNPGTK 66
            +       +      FYK + G + +E+ P F  F      L     L L  R+    
Sbjct: 25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPTFSLFV-----LANGMKLGLWSRHTVEP 79

Query: 67 LPEGPYSTT 75
                   
Sbjct: 80 KASVTGGGG 88

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 35.1 bits (81), Expect = 6e-04
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP 63
          LNH++   +D+     FY+++ GF      +    +  +L L   + L L     
Sbjct: 5  LNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLW-LCLSREPQ 54

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 34.8 bits (80), Expect = 9e-04
 Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 4/76 (5%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP 68
          +   +  + D+     FY+++FG E +        ++++    G   L L +    ++  
Sbjct: 9  IMETALYADDLDAAEAFYRDVFGLEMVL---KLPGQLVFFKC-GRQMLLLFDPQESSRAD 64

Query: 69 EGPYSTTSPTADPSHL 84
                        H 
Sbjct: 65 ANNPIPRHGAVGQGHF 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.43
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.41
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.37
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.34
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.33
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.33
3ghj_A	141	Putative integron gene cassette protein; integron	99.32
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.31
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.3
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.28
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.25
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.25
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.23
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.23
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.22
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.2
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.2
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.2
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.19
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.16
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.15
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.14
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.1
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.1
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.09
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.08
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.08
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.04
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.04
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.03
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.02
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.01
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.0
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.99
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.94
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	98.93
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	98.92
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	98.92
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.91
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.91
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	98.91
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	98.91
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	98.89
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	98.89
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	98.88
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.87
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.87
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	98.87
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.86
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	98.85
2i7r_A	118	Conserved domain protein; structural genomics cons	98.84
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	98.82
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	98.81
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	98.81
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	98.77
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	98.75
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	98.72
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	98.71
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.71
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	98.69
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	98.69
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	98.67
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	98.66
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.65
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.65
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	98.65
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	98.64
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.63
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	98.62
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.62
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	98.61
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.58
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	98.55
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.55
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	98.54
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	98.54
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	98.53
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.52
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	98.5
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.49
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.49
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.48
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	98.47
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.46
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	98.42
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.42
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.38
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.34
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.34
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.21
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.21
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.16
1xy7_A	166	Unknown protein; structural genomics, protein stru	97.87
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.85
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	97.82
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	97.69
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	97.64
1tsj_A	139	Conserved hypothetical protein; structural genomic	97.64
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	97.57
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	97.5
3l20_A	172	Putative uncharacterized protein; hypothetical pro	97.16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	97.14
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	96.82
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	96.65
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	96.46
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	96.41
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	96.34
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.07
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	96.07
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	96.04
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	95.99
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	95.95
2p25_A	126	Glyoxalase family protein; structural genomics, MC	95.88
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	95.83
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	95.71
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	95.61
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	95.55
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	95.5
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	95.16
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	95.06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	94.92
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	94.67
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	94.52
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	94.45
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	94.43
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	94.39
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	94.35
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	94.28
1nki_A	135	Probable fosfomycin resistance protein; potassium	94.21
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	94.11
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	94.03
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	93.58
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	93.51
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	93.03
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	92.74
3huh_A	152	Virulence protein STM3117; structural genomics, ny	92.5
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	92.14
3ghj_A	141	Putative integron gene cassette protein; integron	92.09
2i7r_A	118	Conserved domain protein; structural genomics cons	91.8
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	91.77
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	91.56
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	91.48
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	91.38
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	90.91
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	90.65
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	90.51
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	90.49
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	90.41
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	90.26
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	89.59
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	89.55
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	89.37
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	89.3
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	86.13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	85.69

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.43  E-value=7.1e-13  Score=82.66  Aligned_cols=57  Identities=21%  Similarity=0.253  Sum_probs=46.0

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |++|++.+|+||+|.|+|+++|++||+++|||++....+    ..+++..+ +..|.|+...
T Consensus        20 m~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~g-~~~l~l~~~~   76 (147)
T 3zw5_A           20 FQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DRKALCFG-DQKFNLHEVG   76 (147)
T ss_dssp             HHHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEET-TEEEEEEETT
T ss_pred             ecceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----CceEEEEC-CcEEEEEEcC
Confidence            567889999999999999999999999999999986542    24567776 4567777643

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.41  E-value=1.9e-12  Score=79.92  Aligned_cols=63  Identities=21%  Similarity=0.238  Sum_probs=49.4

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC--------CceeEEEEecCCCcEEEEEecCCC
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF--------GEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--------~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      ++|++.+|+||+|.|+|++++++||+++|||++..+...        .....+|+..+++..|+|+.....
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~   83 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPEL   83 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTC
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCC
Confidence            456789999999999999999999999999998753110        112457888877788999886553

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.37  E-value=8.6e-12  Score=75.10  Aligned_cols=56  Identities=18%  Similarity=0.294  Sum_probs=46.3

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +|++.+++||+|.|+|++++++||+++|||++..+..    ..+++..+ +..|+|.....
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~-~~~~~l~~~~~   60 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----GRIALEFG-HQKINLHQLGN   60 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEET-TEEEEEEETTS
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC----CeEEEEcC-CEEEEEEcCCC
Confidence            6778999999999999999999999999999987642    45677776 57788876543

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.34  E-value=1.4e-11  Score=73.73  Aligned_cols=57  Identities=19%  Similarity=0.197  Sum_probs=44.8

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEec
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |++.+++||+|.|+|+++|++||+++|||++..+.  .......+++..+ +..|+|+..
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~   59 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFGN   59 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-TEEEEEEEC
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-CeEEEEEec
Confidence            66889999999999999999999999999986542  1122346778876 568888873

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.33  E-value=3.6e-12  Score=80.66  Aligned_cols=57  Identities=16%  Similarity=0.308  Sum_probs=44.3

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |++|++.+++||+|.|+|+++|++||+++|||++..+..   ...+|+..+ +..+.++..
T Consensus         1 M~m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~g-~~~~~l~~~   57 (160)
T 3r4q_A            1 MVMKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP---GQLVFFKCG-RQMLLLFDP   57 (160)
T ss_dssp             ---CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET---TTEEEEEET-TEEEEEECH
T ss_pred             CCccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---CcEEEEeCC-CEEEEEEec
Confidence            788889999999999999999999999999999976543   245677775 456777653

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.33  E-value=1.2e-11  Score=76.85  Aligned_cols=56  Identities=23%  Similarity=0.322  Sum_probs=45.1

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +|++.+++||+|.|+|++++++||+++|||++..+.+    ..+++..+ +..|+|.....
T Consensus        18 ~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~~~l~~~-~~~l~l~~~~~   73 (152)
T 3huh_A           18 QMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NRKALIFG-AQKINLHQQEM   73 (152)
T ss_dssp             --CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TEEEEEET-TEEEEEEETTB
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----CeEEEEeC-CeEEEEeccCC
Confidence            4678999999999999999999999999999987642    45778876 46788876543

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.32  E-value=9.5e-12  Score=77.23  Aligned_cols=57  Identities=23%  Similarity=0.245  Sum_probs=44.0

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC-CcEEEEEec
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG-AFALHLIER   61 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~-~~~l~L~~~   61 (86)
                      +|++.+++||+|.|+|++++++||+++|||++..+.+..  ..+|+.+++ +..|+|.+.
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR--RWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT--TEEEEEETTTTEEEEEEEC
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC--cEEEEEecCCCcEEEEecc
Confidence            566899999999999999999999999999997664322  456777654 577888775

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.31  E-value=1.2e-11  Score=73.62  Aligned_cols=59  Identities=19%  Similarity=0.257  Sum_probs=44.5

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEecCC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      |++.+++||+|.|+|+++|++||+++|||++..+.  ..+....+++..+++ .|+|+....
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~~~   61 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFISDQ   61 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEECTT
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEeccC
Confidence            45789999999999999999999999999986432  111123466787654 888887543

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.30  E-value=9.9e-12  Score=78.57  Aligned_cols=61  Identities=16%  Similarity=0.278  Sum_probs=46.8

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecCC
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      ++|++.+++||+|.|+|+++|++||+++|||++..+..  ..+...+|+..+ +..|+|++...
T Consensus         2 M~~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~l~l~~~~~   64 (161)
T 3oa4_A            2 MAEKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-ESKIELLEPLS   64 (161)
T ss_dssp             ---CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-TEEEEEEEESS
T ss_pred             cccccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-CeEEEEEeECC
Confidence            44568899999999999999999999999999865421  223577888885 57889887654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.28  E-value=3.5e-11  Score=73.57  Aligned_cols=58  Identities=21%  Similarity=0.270  Sum_probs=43.3

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC--ceeEEEEecCCCcEEEEEecCC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG--EFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~--~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      |++.+++||+|.|+|+++|++||+++|||++..+....  ....+++.  ++..|+|+...+
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~~~   60 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP--GGLSIVLREHDG   60 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT--TSCEEEEEEETT
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc--CCCEEEEEeCCC
Confidence            56789999999999999999999999999987543211  12334455  467888887654

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.25  E-value=4.3e-11  Score=73.30  Aligned_cols=59  Identities=14%  Similarity=0.288  Sum_probs=47.0

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCC-----cEEEEEecCC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGA-----FALHLIERNP   63 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~-----~~l~L~~~~~   63 (86)
                      ++.+++||+|.|+|++++++||+++|||++..+..  ..+...+|+..+++     ..|+|++...
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            46899999999999999999999999999875421  12256788888764     7899987543

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.25  E-value=6.8e-11  Score=72.99  Aligned_cols=61  Identities=16%  Similarity=0.236  Sum_probs=45.9

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCC---CcEEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPG---AFALHLIERNP   63 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~---~~~l~L~~~~~   63 (86)
                      +|++.+++||+|.|+|++++++||+++|||++..+..  .+....+|+..++   +..|+|+....
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~   68 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG   68 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETT
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCC
Confidence            4678899999999999999999999999999875431  1224567888865   37888887544

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.23  E-value=3.1e-11  Score=75.67  Aligned_cols=60  Identities=23%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--C--------------CCceeEEEEecCCCcEEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--N--------------FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~--------------~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+.+.+++||+|.|+|+++|++||+++|||++..+.  +              ......+|+..+ +..|+|++...
T Consensus        14 ~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g-~~~leL~~~~~   89 (159)
T 3gm5_A           14 ILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG-PLQLELIEPDE   89 (159)
T ss_dssp             CCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET-TEEEEEEEECS
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC-CEEEEEEEECC
Confidence            455789999999999999999999999999975321  1              123567888885 68899997643

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.23  E-value=4.4e-11  Score=73.62  Aligned_cols=60  Identities=15%  Similarity=0.191  Sum_probs=46.0

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------------CCceeEEEEecCCC-cEEEEEec
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------------FGEFKVIWLNLPGA-FALHLIER   61 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------------~~~~~~~~l~~~~~-~~l~L~~~   61 (86)
                      |..+++.+++||+|.|+|++++++||++ |||++..+..             ......+++..+++ ..|+|+..
T Consensus         4 M~~~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A            4 MAKNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             CTTCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CCcccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            5555678999999999999999999999 9999864321             12356778887544 78888864

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.22  E-value=5.3e-11  Score=71.20  Aligned_cols=58  Identities=16%  Similarity=0.350  Sum_probs=45.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      ++++||+|.|+|+++|++||+++|||++..+.  ...+...+|+..+++..|+|+.....
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~   61 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDV   61 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCC
Confidence            37899999999999999999999999986541  11225677888866788999876643

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.20  E-value=1.1e-10  Score=70.68  Aligned_cols=56  Identities=13%  Similarity=0.239  Sum_probs=44.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +.+++||+|.|+|+++|++||+ +|||++..+.   ...+...+|+..+ +..|+|++...
T Consensus         5 ~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~   63 (133)
T 3hdp_A            5 SLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-GYRVELVAPDG   63 (133)
T ss_dssp             CCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-TEEEEEEEESS
T ss_pred             ceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-CEEEEEEecCC
Confidence            5799999999999999999999 9999986432   2233577888875 67899987544

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.20  E-value=6.4e-11  Score=70.85  Aligned_cols=57  Identities=28%  Similarity=0.394  Sum_probs=45.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +.+++||+|.|+|+++|++||+++|||++..+..  ..+...+|+..+ +..|+|+....
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~   61 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-NTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-SSEEEEEEECS
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-CEEEEEEecCC
Confidence            6799999999999999999999999999864321  123567888885 57888887543

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.20  E-value=5.9e-11  Score=74.55  Aligned_cols=53  Identities=15%  Similarity=0.204  Sum_probs=41.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +.+++||.|.|+|+++|++||+++|||++..+.+    ..+++.++++..|.|+...
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~~~~~~g~~l~l~~~~   56 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFAMFVMKTGLRLGLWAQE   56 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEEEEECTTSCEEEEEEGG
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEEEEEcCCCcEEEEecCC
Confidence            4699999999999999999999999999876542    4567887567888887654

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.19  E-value=5.3e-11  Score=71.75  Aligned_cols=57  Identities=21%  Similarity=0.310  Sum_probs=44.1

Q ss_pred             CccceeeEEEEEe--CCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCCcEEEEEec
Q 037654            4 NIGATLNHISRES--SDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         4 m~i~~i~HI~i~V--~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |++.+++||+|.|  +|++++++||+++|||++..+... .....+|+..+ +..|+|...
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~   65 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCG-NQEIHIGVE   65 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEET-TEEEEEEEC
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeC-CEEEEEEec
Confidence            4488999999999  899999999999999998765321 01234788886 567888764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.16  E-value=1.6e-10  Score=68.34  Aligned_cols=53  Identities=15%  Similarity=0.275  Sum_probs=42.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++||+|.|+|+++|++||+++|||++..+.+   ...+|+..+++..|.|....
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~l~l~~~~   54 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTEEEEECTTCCEEEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---CcEEEEEcCCCcEEEEEeCC
Confidence            378999999999999999999999999875532   24578887666778887653

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.15  E-value=9.5e-11  Score=70.43  Aligned_cols=60  Identities=18%  Similarity=0.227  Sum_probs=43.4

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecC-CCcEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLP-GAFALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~-~~~~l~L~~~~   62 (86)
                      +|++.+++||+|.|+|++++++||+++|||++..+... .+...+.+..+ +...|+|....
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGG
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCc
Confidence            45578999999999999999999999999998764321 11334445543 34678887644

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.14  E-value=1.8e-10  Score=72.30  Aligned_cols=33  Identities=15%  Similarity=0.189  Sum_probs=29.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      .++|+|++|.|+|+++|++||+++|||++..+.
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~   56 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADV   56 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEee
Confidence            347999999999999999999999999986543

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.14  E-value=2.9e-10  Score=69.28  Aligned_cols=53  Identities=21%  Similarity=0.211  Sum_probs=42.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +.+++||.|.|+|+++|++||+++|||++..+.+    ..+++..+++..|.|....
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEEEECSTTCEEEEESSS
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEEEEcCCCcEEEEEeCC
Confidence            4699999999999999999999999999875532    3455666556788887654

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.10  E-value=2.2e-10  Score=71.30  Aligned_cols=53  Identities=21%  Similarity=0.268  Sum_probs=42.8

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |++.+++||.|.|+|+++|++||+++|||++..+.  +  ..+++..+ +..|.|+..
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~~~~~~~-~~~l~l~~~   53 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN--P--EIIFYQMN-GFVLATWLV   53 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S--SEEEEECS-SSEEEEEEH
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C--CEEEEEcC-CEEEEEEec
Confidence            34679999999999999999999999999987654  2  46778875 678888865

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.10  E-value=1.2e-09  Score=65.76  Aligned_cols=55  Identities=16%  Similarity=0.312  Sum_probs=42.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCC---CcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPG---AFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~---~~~l~L~~~~   62 (86)
                      +++|++|.|+|+++|++||+++|||++..+..  .+....+|+..++   +..|+|....
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   61 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW   61 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcC
Confidence            68999999999999999999999999865431  1224567888764   4678887643

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.09  E-value=1e-09  Score=70.21  Aligned_cols=48  Identities=19%  Similarity=0.316  Sum_probs=37.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPG   52 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~   52 (86)
                      ...+++||+|.|+|++++++||+++|||++..+.  ..+....+++..++
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~   80 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYED   80 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCC
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCC
Confidence            4578999999999999999999999999987542  22335667777654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.08  E-value=3.1e-10  Score=78.04  Aligned_cols=47  Identities=13%  Similarity=0.239  Sum_probs=38.4

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEec
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNL   50 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~   50 (86)
                      |++|++.+++||+|.|+|+++|++||+++|||++..+.+.   ..+|+..
T Consensus         1 M~m~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~l~~   47 (309)
T 3hpy_A            1 MAMTGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVYFKC   47 (309)
T ss_dssp             -CBCSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT---SCEEEEC
T ss_pred             CCccccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC---CeEEEEe
Confidence            7778899999999999999999999999999999766431   2356654

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.08  E-value=5e-10  Score=68.81  Aligned_cols=52  Identities=21%  Similarity=0.294  Sum_probs=42.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +.+++||+|.|+|++++++||+++|||++..+.+    ..+|+..+ +..|+|....
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~-~~~l~l~~~~   53 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCG-DLWVCLSYDE   53 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEET-TEEEEEEECT
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC----CcEEEEEC-CEEEEEEECC
Confidence            6799999999999999999999999999876532    24678875 5678887654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.07  E-value=6.2e-10  Score=67.93  Aligned_cols=51  Identities=24%  Similarity=0.380  Sum_probs=41.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +.+++||.|.|+|+++|++||+++|||++..+.+    ..+|+..+ +..|+|...
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~-~~~l~l~~~   52 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELG-SLWLCLSRE   52 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEET-TEEEEEEEC
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC----CceEEecC-CEEEEEEeC
Confidence            6799999999999999999999999999876532    24677875 567887765

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.07  E-value=4.7e-10  Score=68.10  Aligned_cols=51  Identities=20%  Similarity=0.157  Sum_probs=38.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      +..+++||+|.|+|+++|++||+++|||++..+.+    ..+.+..++ ..+.|..
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~g-~~~~l~~   56 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DRITLDFFG-DQLVCHL   56 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEETT-EEEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----CcEEEEEeC-CEEEEEE
Confidence            45789999999999999999999999999865432    234556543 3355544

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.04  E-value=8.1e-10  Score=66.78  Aligned_cols=55  Identities=24%  Similarity=0.359  Sum_probs=39.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCce---eEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEF---KVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~---~~~~l~~~~~~~l~L~~~   61 (86)
                      +.+++||+|.|+|+++|++||+++|||++..+.+....   ...|+..+ +..|+|...
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~   59 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIA-GLWICIMEG   59 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEET-TEEEEEEEC
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeC-CEEEEEecC
Confidence            57999999999999999999999999998654321100   11367775 567888764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.04  E-value=5.5e-10  Score=68.48  Aligned_cols=55  Identities=15%  Similarity=0.298  Sum_probs=41.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCce---eEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEF---KVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~---~~~~l~~~~~~~l~L~~~   61 (86)
                      +.+++||.|.|+|++++++||+++|||++..+.+....   ...|+..+ +..|+|+..
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g-~~~l~l~~~   59 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG-DIWVAIMQG   59 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET-TEEEEEEEC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEEC-CEEEEEEeC
Confidence            67999999999999999999999999998765321111   11267775 567888764

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.03  E-value=9.2e-10  Score=67.59  Aligned_cols=54  Identities=22%  Similarity=0.294  Sum_probs=39.9

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      +.|+  +++||+|.|+|+++|++||+++|||++..+....  ..+++..+ +..|.+..
T Consensus         4 ~~M~--~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~-~~~l~l~~   57 (141)
T 2rbb_A            4 KNMA--DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IFRGLDTG-KSCIGFNA   57 (141)
T ss_dssp             -CCC--EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TEEEEECS-SSEEEEEC
T ss_pred             HHcC--cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ceEEeecC-CEEEEEcC
Confidence            4453  9999999999999999999999999986443222  34567764 56676653

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.02  E-value=1.5e-09  Score=67.51  Aligned_cols=52  Identities=17%  Similarity=0.281  Sum_probs=42.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+++||.|.|+|++++++||+++|||++..+.+    ..+++.++++..|.|....
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEEEEECTTSCEEEEEETT
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeEEEEcCCCcEEEEEeCC
Confidence            489999999999999999999999999865431    3567787656778887654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.01  E-value=1.7e-09  Score=76.36  Aligned_cols=62  Identities=15%  Similarity=0.269  Sum_probs=44.5

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-CC--CceeEEEEecCC---CcEEEEEecCC
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP-NF--GEFKVIWLNLPG---AFALHLIERNP   63 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~~--~~~~~~~l~~~~---~~~l~L~~~~~   63 (86)
                      |.|++.+|+||+|.|+|++++++||+++|||+++.+. ..  .+....++....   +..|+++..+.
T Consensus         2 M~~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~   69 (335)
T 3oaj_A            2 MAKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAG   69 (335)
T ss_dssp             -CCCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTT
T ss_pred             CcccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCC
Confidence            3467899999999999999999999999999987542 11  112334444321   46788887654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.00  E-value=1.2e-09  Score=70.05  Aligned_cols=60  Identities=17%  Similarity=0.254  Sum_probs=43.8

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecC------------------CCcEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLP------------------GAFALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~------------------~~~~l~L~~~~   62 (86)
                      .+.+.+++||+|.|+|++++++||+++|||++..+..  ......+++..+                  ++..|+|+...
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            3457899999999999999999999999999875431  112344556543                  24678887653

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.99  E-value=3.3e-09  Score=74.41  Aligned_cols=60  Identities=13%  Similarity=0.220  Sum_probs=44.2

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------------CCceeEEEEecCC---CcEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------------FGEFKVIWLNLPG---AFALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------------~~~~~~~~l~~~~---~~~l~L~~~~   62 (86)
                      .|.+.+++||+|.|+|+++|++||+++|||++..+..             .+.+..+|+..++   ...|+|....
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~   97 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNY   97 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEET
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccC
Confidence            4567799999999999999999999999999865422             1224466776542   3567776643

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.94  E-value=3.1e-09  Score=73.54  Aligned_cols=56  Identities=16%  Similarity=0.390  Sum_probs=43.4

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC---CcEEEEEe
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG---AFALHLIE   60 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~---~~~l~L~~   60 (86)
                      |..|++.+++||.|.|+|++++++||+++|||++..+.+    ..+||..++   ...|.|..
T Consensus         1 M~~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~   59 (310)
T 3b59_A            1 MSLSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQGADEHHVVQLRR   59 (310)
T ss_dssp             --CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEECTTSCCSCSEEEEE
T ss_pred             CCceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----CeEEEEECCCCCCEEEEEEE
Confidence            667889999999999999999999999999999876542    346777754   25566654

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=98.93  E-value=2.7e-09  Score=66.75  Aligned_cols=35  Identities=14%  Similarity=0.054  Sum_probs=30.8

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +|++.++. ++|.|+|+++|++||+++|||++..+.
T Consensus         2 mM~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~   36 (144)
T 3r6a_A            2 VMKILQIL-SRLYVADLNPALEFYEELLETPVAMRF   36 (144)
T ss_dssp             -CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEEC
T ss_pred             eEEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEe
Confidence            47788888 999999999999999999999987654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=98.92  E-value=3.8e-09  Score=64.53  Aligned_cols=53  Identities=15%  Similarity=0.304  Sum_probs=38.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeee-CCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEA-PNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~-~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ...|+||+|.|+|+++|++||++ |||++..+ .+.+  ..+++...++..|.|...
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKG--SEVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC-------CCEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCC--CEEEEEeCCCeEEEEEEC
Confidence            35899999999999999999999 99998765 2211  345666224567777543

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=98.92  E-value=7.3e-09  Score=62.46  Aligned_cols=51  Identities=12%  Similarity=0.130  Sum_probs=40.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ....|+.|.|+|+++|++||+++|||++..+.    ...+++..+ +..|+|....
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~~~~~~~-~~~l~l~~~~   54 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDFAGVVRD-DVTLFISAVQ   54 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSEEEEEET-TEEEEEEECS
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecC----CCEEEEEEC-CEEEEEEcCC
Confidence            46689999999999999999999999997652    134667765 5778887643

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.91  E-value=2.6e-09  Score=73.30  Aligned_cols=55  Identities=15%  Similarity=0.210  Sum_probs=41.9

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEEe
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      ||.+.+++||+|.|+|++++++||+++|||++.....   ...+|+..++. ..|.|..
T Consensus         1 Mm~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~   56 (305)
T 2wl9_A            1 MAKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE---DDRIYLRMDRWHHRIVLHA   56 (305)
T ss_dssp             CCCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC---TTEEEEECSSBSCSEEEEC
T ss_pred             CCccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC---CCeEEEEeCCCeEEEEEEE
Confidence            3678999999999999999999999999999876221   13457776542 5566653

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.91  E-value=3.7e-09  Score=72.51  Aligned_cols=54  Identities=9%  Similarity=0.142  Sum_probs=41.5

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC-CcEEEEE
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG-AFALHLI   59 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~-~~~l~L~   59 (86)
                      .|++.+++||+|.|+|+++|++||+++|||++..+..   ....|+..++ ...|.|.
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~   58 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE---KDRFYLRMDYWHHRIVVH   58 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC---SSEEEEESSSBSCSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC---CcceEEEeCCCceEEEEe
Confidence            6788999999999999999999999999999876532   1345676643 2345554

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=98.91  E-value=6.9e-09  Score=64.57  Aligned_cols=54  Identities=11%  Similarity=0.210  Sum_probs=43.0

Q ss_pred             CccceeeEEEEEeCCHHHHHHHH---HHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            4 NIGATLNHISRESSDIRRLADFY---KEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY---~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +.+.+++||+|.|+|+++|++||   +++|||++..+...   ...|+. + +..|.|+...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~---~~~~~~-g-~~~l~l~~~~   72 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR---GKSYKH-G-KTYLVFVQTE   72 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT---EEEEEE-T-TEEEEEEECC
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC---CceEec-C-CeEEEEEEcC
Confidence            45789999999999999999999   99999998765432   235766 4 5778888654

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=98.91  E-value=9.7e-10  Score=65.28  Aligned_cols=53  Identities=11%  Similarity=0.098  Sum_probs=39.1

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC--CcEEEEEe
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG--AFALHLIE   60 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~--~~~l~L~~   60 (86)
                      .|++.++ |+.|.|+|+++|++||+++|||++..+.+    ..+++..++  +..|.+..
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~l~l~~   57 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPLEAHAQVSFAR   57 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEEEEEEEEEEES
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC----EEEEEecCCCCcEEEEEEc
Confidence            3678899 99999999999999999999999876532    344566543  34566654

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=98.89  E-value=3.8e-09  Score=64.60  Aligned_cols=53  Identities=17%  Similarity=0.191  Sum_probs=40.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +.+++|++|.|+|+++|++||++ |||++..+.+.  ...+++..+++..|.|...
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~--~~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS--APHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG--CSEEEEECTTSCEEEEEEH
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC--CceEEEEcCCCeEEEEecC
Confidence            36899999999999999999998 99998754321  2355666655677888763

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=98.89  E-value=5.3e-09  Score=65.40  Aligned_cols=46  Identities=20%  Similarity=0.299  Sum_probs=37.5

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      .|. .+++||+|.|+|++++++||+++|||++...++   ...+|+..++
T Consensus        21 gM~-~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~~~   66 (148)
T 2r6u_A           21 GMT-GRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD---MDYSMVTTGP   66 (148)
T ss_dssp             TTC-CCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT---TTEEEEECSC
T ss_pred             ccC-CceEEEEEEeCCHHHHHHHHHHccCcEEEECCC---CCEEEEEeCC
Confidence            454 789999999999999999999999999876432   2467788764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.87  E-value=4.4e-09  Score=71.78  Aligned_cols=53  Identities=17%  Similarity=0.283  Sum_probs=39.6

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEee-eCCCCceeEEEEecCCC-cEEEEEe
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIE-APNFGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~-~~~~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      |++.+++||.|.|+|+++|++||+++|||++.. +.+    ..+|+..++. ..|.+..
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~l~l~~   55 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE----GALYLRMDDFPARLVVVP   55 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS----SCEEEESSSSSCSEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC----CeEEEEeCCCcEEEEEec
Confidence            567899999999999999999999999999876 432    2356666543 3454443

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.87  E-value=3.8e-09  Score=75.45  Aligned_cols=46  Identities=13%  Similarity=0.140  Sum_probs=38.1

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      +..|.+|.||+|.|+|+++|++||+++|||+++.+.+    ..+||+..+
T Consensus        12 ~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~----~~~~lr~~~   57 (365)
T 4ghg_A           12 APDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIYLRSFE   57 (365)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTT
T ss_pred             CCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC----CEEEEEeCC
Confidence            4468899999999999999999999999999987642    456776543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=98.87  E-value=9.1e-09  Score=62.89  Aligned_cols=57  Identities=18%  Similarity=0.216  Sum_probs=40.8

Q ss_pred             CCCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            1 MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         1 ~~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      |..|.+ .--+..|.|+|+++|++||+++|||++..+.+    ..+++..+ +..|+|.....
T Consensus         1 M~~~~~-~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~l~~~-~~~l~l~~~~~   57 (134)
T 3fcd_A            1 MSLSDI-HQITPFLHIPDMQEALTLFCDTLGFELKYRHS----NYAYLELS-GCGLRLLEEPA   57 (134)
T ss_dssp             -----C-CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEET-TEEEEEEECCC
T ss_pred             Cchhhh-hcceeEEEECCHHHHHHHHHhccCcEEEEeCC----CeEEEEEC-CEEEEEEeCCC
Confidence            554543 44568999999999999999999999876532    36778875 57888887654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.86  E-value=9e-09  Score=71.79  Aligned_cols=60  Identities=15%  Similarity=0.197  Sum_probs=41.8

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-C--CceeEEEEecCC---CcEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-F--GEFKVIWLNLPG---AFALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~--~~~~~~~l~~~~---~~~l~L~~~~   62 (86)
                      ||++.+++||+|.|+|+++|++||+++|||++..+.. .  .....+++..+.   +..|.+++.+
T Consensus        25 m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~   90 (338)
T 1zsw_A           25 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIP   90 (338)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECT
T ss_pred             cCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECC
Confidence            3458899999999999999999999999999875431 1  111223344321   4677777643

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=98.85  E-value=1.8e-08  Score=61.56  Aligned_cols=59  Identities=19%  Similarity=0.319  Sum_probs=42.2

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCC-cEEEEEecC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGA-FALHLIERN   62 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~-~~l~L~~~~   62 (86)
                      .|+ ....||+|.|+|+++|++||+++|||++..+... +....+|+..++. ..|++....
T Consensus         7 ~m~-~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   67 (139)
T 1twu_A            7 SFQ-AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE   67 (139)
T ss_dssp             SCB-CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEET
T ss_pred             CCC-cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecC
Confidence            354 4667899999999999999999999998754321 2245677877543 457776543

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=98.84  E-value=7.5e-09  Score=61.48  Aligned_cols=47  Identities=15%  Similarity=0.152  Sum_probs=37.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHL   58 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L   58 (86)
                      ++++|+.|.|+|+++|++||+++|||++....+    ..+++..++ ..+.+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~-~~l~l   50 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIGS-HCLML   50 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEETT-EEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CEEEEEeCC-eEEEE
Confidence            489999999999999999999999999865422    356777764 45654

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=98.82  E-value=1.7e-08  Score=60.69  Aligned_cols=49  Identities=14%  Similarity=0.113  Sum_probs=38.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ...|+.|.|+|+++|++||+++|||++..+.    ...+++..+ +..|+|...
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~~~~~~~-~~~l~l~~~   53 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGD----RDFAGVRRG-DIRLHISRT   53 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEEC----SSEEEEEET-TEEEEEEEC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeCC----CCEEEEEEC-CEEEEEEcC
Confidence            3448999999999999999999999987652    135667775 577888754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=98.81  E-value=1.3e-08  Score=69.64  Aligned_cols=53  Identities=9%  Similarity=0.303  Sum_probs=41.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ++.+++||+|.|+|++++++||+++|||++..+..    ..++|..+ +..|.|+...
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~~~L~~g-~~~l~l~~~~   75 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DAFTIQLG-VSQIQFRAAA   75 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SEEEEEET-TEEEEEEECC
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CEEEEEeC-CEEEEEEECC
Confidence            36799999999999999999999999999876642    35777775 4677777643

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=98.81  E-value=1.5e-08  Score=70.31  Aligned_cols=45  Identities=18%  Similarity=0.336  Sum_probs=37.0

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEec
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNL   50 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~   50 (86)
                      +.|++.+++||.|.|+|++++++||+++|||++..+.+    ..+|+..
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~   55 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRS   55 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEEC
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----CEEEEEe
Confidence            34668899999999999999999999999999876542    3456664

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=98.77  E-value=3.1e-08  Score=69.83  Aligned_cols=55  Identities=13%  Similarity=0.120  Sum_probs=42.9

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC-CcEEEEEecC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG-AFALHLIERN   62 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~-~~~l~L~~~~   62 (86)
                      +.+.+|+||+|.|+|++++.+||+++|||++..+.+    ..++|..++ +..|+|+...
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~~~~g~~~~~l~l~~~~  204 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFVRYRSAGDIGNVIDLKLT  204 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TEEEEECSSSSSCEEEEESS
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CEEEEEeCCCCcEEEEEeCC
Confidence            468899999999999999999999999999986642    234455543 3578887653

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=98.75  E-value=4.8e-08  Score=68.71  Aligned_cols=59  Identities=19%  Similarity=0.271  Sum_probs=45.6

Q ss_pred             CccceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeC----CCCceeEEEEecCC-CcEEEEEecC
Q 037654            4 NIGATLNHISRESS--DIRRLADFYKEIFGFEEIEAP----NFGEFKVIWLNLPG-AFALHLIERN   62 (86)
Q Consensus         4 m~i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~----~~~~~~~~~l~~~~-~~~l~L~~~~   62 (86)
                      +.+.+++||+|.|+  |++++++||+++|||++....    .......+|+..++ .+.|.|++..
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~  219 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPD  219 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEEC
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeec
Confidence            55789999999999  999999999999999986432    22224567787653 4788888754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=98.72  E-value=5.2e-08  Score=66.88  Aligned_cols=57  Identities=19%  Similarity=0.280  Sum_probs=42.0

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---CCceeEEEEecCCC-cEEEEEe
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN---FGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      +.+.+|+||+|.|+|+++|++||+++|||++.....   .+....+|+..++. ..+.+..
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVE  207 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEec
Confidence            567899999999999999999999999999865421   12246678887543 2344443

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=98.71  E-value=4.2e-08  Score=60.67  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=24.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEI   35 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~   35 (86)
                      ..+++||+|.|+|+++|++||+++ |+...
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~   35 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGTL-GFEFN   35 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHHT-TCEEC
T ss_pred             CccEEEEEEEeCCHHHHHHHHHHh-CCCcc
Confidence            578999999999999999999985 55544

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.71  E-value=6.5e-08  Score=70.47  Aligned_cols=58  Identities=10%  Similarity=-0.027  Sum_probs=44.6

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecCCCcEEEEEec
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .|.+.+++||.|.|+|+++|++||+++|||+++.+.+    ......+++..+ +..|.|...
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-~~~l~L~~~   81 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-DLRFLFTAP   81 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-TEEEEEEEE
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-CEEEEEecC
Confidence            5678899999999999999999999999999875522    222344556654 577877765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=98.69  E-value=8.4e-08  Score=67.20  Aligned_cols=57  Identities=16%  Similarity=0.174  Sum_probs=43.6

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CCceeEEEEecCCC-cEEEEEe
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-FGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      |.+.+++||+|.|+|++++++||+++|||++..... .+....+|+..++. ..|.+..
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~  207 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMR  207 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEecCCcEEEEEEEeCCCceEEEEec
Confidence            467899999999999999999999999999865421 12235678887653 4566665

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=98.69  E-value=4.3e-08  Score=66.72  Aligned_cols=50  Identities=12%  Similarity=0.186  Sum_probs=38.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEE
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~   59 (86)
                      |.+|+||.|.|+|+++|++||+++|||++..+.+    ..+|+..++. ..|.+.
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~l~~~   52 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQ   52 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC----CeEEEEeCCCcEEEEEe
Confidence            5789999999999999999999999999876532    2466776543 334443

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=98.67  E-value=8.9e-09  Score=62.77  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      +++.+++|+.|.|+|+++|++||+++|||++..+.
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~   38 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF   38 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEc
Confidence            45678999999999999999999999999987654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=98.66  E-value=1.3e-07  Score=67.51  Aligned_cols=58  Identities=12%  Similarity=0.105  Sum_probs=44.0

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC----CCCceeEEEEecCCCcEEEEEec
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP----NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~----~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +|.+.+++||.|.|+|++++++||+++|||+++.+.    .........+..+ +..|.|...
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-~~~l~l~~~   78 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-SARFVLTSV   78 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-TEEEEEEEE
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-CEEEEEecC
Confidence            477899999999999999999999999999987642    2112344555654 577777764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.65  E-value=5.3e-08  Score=66.16  Aligned_cols=43  Identities=9%  Similarity=0.097  Sum_probs=35.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      |.+++||.|.|+|+++|++||+++|||++..+.+    ..+|+..++
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~~~   44 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQ   44 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSS
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC----CeEEEEcCC
Confidence            6799999999999999999999999999876532    235666654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.65  E-value=1.2e-07  Score=68.90  Aligned_cols=59  Identities=8%  Similarity=0.019  Sum_probs=45.2

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecCCCcEEEEEec
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +.|.+.+++||.|.|+|++++.+||+++|||+++.+..    ......+++..+ +..|.|.+.
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-~~~l~L~~~   87 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-SLSFLFTAP   87 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-TEEEEEEEE
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-CEEEEEecC
Confidence            46778999999999999999999999999999875521    112445556664 577887765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=98.65  E-value=4.7e-08  Score=68.50  Aligned_cols=44  Identities=16%  Similarity=0.135  Sum_probs=36.1

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEec
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNL   50 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~   50 (86)
                      .+++.+++||.|.|+|+++|++||+++|||++..+.+    ..+|+..
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~   49 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRG   49 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET----TEEEEEC
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC----CEEEEEe
Confidence            3568999999999999999999999999999876532    2355554

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=98.64  E-value=6e-08  Score=66.30  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=35.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLP   51 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~   51 (86)
                      +.+++||.|.|+|+++|++||+++|||++..+...   ..+|+..+
T Consensus         5 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~l~~~   47 (307)
T 1mpy_A            5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAW   47 (307)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT---SCEEEECT
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC---CcEEEEec
Confidence            78999999999999999999999999999765432   23566653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.63  E-value=1.3e-07  Score=65.80  Aligned_cols=35  Identities=17%  Similarity=0.348  Sum_probs=32.1

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      |.+.+++||+|.|+|+++|++||+++|||++..+.
T Consensus       176 ~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~  210 (338)
T 1zsw_A          176 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN  210 (338)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             ccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeec
Confidence            56789999999999999999999999999987654

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=98.62  E-value=1.1e-07  Score=58.47  Aligned_cols=49  Identities=18%  Similarity=0.170  Sum_probs=37.6

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      -.+.|.|+|+++|++||+++|||++..+...  ...+++..+ +..|+|...
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~~~l~~g-~~~l~l~~~   55 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEFVYLTLD-GVDVMLEGI   55 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTEEEEEET-TEEEEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCEEEEEcC-CeEEEEEec
Confidence            4689999999999999999999998742211  245677875 567888765

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.62  E-value=6.8e-08  Score=65.60  Aligned_cols=56  Identities=20%  Similarity=0.342  Sum_probs=40.3

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC----C-ceeEEEEecCCC-cEEEEE
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF----G-EFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~----~-~~~~~~l~~~~~-~~l~L~   59 (86)
                      +.+.+++||+|.|+|+++|++||+++|||++......    + ....+|+..++. ..+.+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  199 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALA  199 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEe
Confidence            5578999999999999999999999999998643211    1 134567776432 345554

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=98.61  E-value=1.2e-07  Score=66.57  Aligned_cols=56  Identities=13%  Similarity=0.112  Sum_probs=40.4

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      |.+.+++||.|.|+|++++++||+++|||+++.+..........+..+ ...+.|..
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~~~~~~g-~~~l~l~~   56 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQG-QVTLVLTE   56 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEET-TEEEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceEEEEEeC-CEEEEEeC
Confidence            568899999999999999999999999999875432110133445554 56666654

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.58  E-value=3.2e-07  Score=62.83  Aligned_cols=54  Identities=20%  Similarity=0.272  Sum_probs=37.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCce-eEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEF-KVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~-~~~~l~~~~~~~l~L~~   60 (86)
                      ..+.|+.|.|+|++++++||+++|||++......... ..+++..++.....+..
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~   85 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAP   85 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEE
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeecc
Confidence            3799999999999999999999999998765432210 34556665443344443

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=98.55  E-value=4.2e-07  Score=64.86  Aligned_cols=59  Identities=10%  Similarity=0.208  Sum_probs=44.2

Q ss_pred             CccceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeC-------CCCceeEEEEecC-CCcEEEEEecC
Q 037654            4 NIGATLNHISRESS--DIRRLADFYKEIFGFEEIEAP-------NFGEFKVIWLNLP-GAFALHLIERN   62 (86)
Q Consensus         4 m~i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~-------~~~~~~~~~l~~~-~~~~l~L~~~~   62 (86)
                      ..+.+|+||+|.|+  |++++.+||+++|||++..+.       +.+.....++..+ +.+.|.|.+..
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~  248 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA  248 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEEC
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCC
Confidence            34789999999999  999999999999999986442       2223455666543 34678887764

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.55  E-value=3.1e-07  Score=66.91  Aligned_cols=58  Identities=12%  Similarity=0.070  Sum_probs=44.1

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------CCceeEEEEecC-CCcEEEEEecC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------FGEFKVIWLNLP-GAFALHLIERN   62 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------~~~~~~~~l~~~-~~~~l~L~~~~   62 (86)
                      .+.+|+||+|.|+|++++++||+++|||++..+..       ..+....|+..+ +.+.|.|.+..
T Consensus       199 ~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~  264 (424)
T 1sqd_A          199 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV  264 (424)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEEC
T ss_pred             CcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEeccc
Confidence            46789999999999999999999999999875421       122455667643 35788888764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=98.54  E-value=4.7e-08  Score=60.45  Aligned_cols=30  Identities=17%  Similarity=0.254  Sum_probs=28.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEe
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEI   35 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~   35 (86)
                      +.+++|+.|.|+|+++|++||+++|||++.
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~   48 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGD   48 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEE
Confidence            568999999999999999999999999985

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=98.54  E-value=1.1e-07  Score=65.02  Aligned_cols=56  Identities=16%  Similarity=0.246  Sum_probs=39.7

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CCcee-EEEEecCC-CcEEEEE
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-FGEFK-VIWLNLPG-AFALHLI   59 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~~~~-~~~l~~~~-~~~l~L~   59 (86)
                      |.+.+++||+|.|+|+++|++||+++|||++..+.. .++.. ..|+..++ ...+.+.
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  204 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFI  204 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEe
Confidence            567899999999999999999999999999865421 11122 35666543 2345544

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=98.53  E-value=6.5e-07  Score=54.27  Aligned_cols=51  Identities=16%  Similarity=0.199  Sum_probs=38.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC-CCCceeEEEEecCCCcEEEEEec
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      -.|.|.|+|+++|++||+++|||++..+. ..+....+.+..+ +..|.|...
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~-~~~l~l~~~   55 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTG-GGIVMVRRT   55 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECS-SSEEEEEET
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecC-CeEEEEEec
Confidence            36899999999999999999999997542 2132346667765 467777654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.52  E-value=3.5e-07  Score=66.54  Aligned_cols=58  Identities=17%  Similarity=0.186  Sum_probs=43.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------CCceeEEEEecC-CCcEEEEEecC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------FGEFKVIWLNLP-GAFALHLIERN   62 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------~~~~~~~~l~~~-~~~~l~L~~~~   62 (86)
                      .+.+|+||+|.|+|++++++||+++|||++..+..       ..+...+|+..+ +.+.|.|.+..
T Consensus       196 ~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~  261 (418)
T 1sp8_A          196 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPV  261 (418)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEEC
T ss_pred             CcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecc
Confidence            46789999999999999999999999999865421       112455677653 35788888764

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=98.50  E-value=7.6e-07  Score=53.45  Aligned_cols=49  Identities=18%  Similarity=0.216  Sum_probs=38.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ...|+.|.|+|+++|++||++ |||++..+.    ...+++..+ +..|+|....
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~~~~~~~~~-~~~l~l~~~~   51 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFRD----AGWMILQRG-DLMLEFFAHP   51 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEEC----SSEEEEEET-TEEEEEEECT
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEecC----CCEEEEEeC-CEEEEEEeCC
Confidence            356899999999999999998 999987652    245667775 5678887643

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.49  E-value=3.9e-07  Score=62.94  Aligned_cols=53  Identities=15%  Similarity=0.356  Sum_probs=39.7

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEE
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~   59 (86)
                      ..+.+++||.|.|+|++++++||+++|||++..+..   ...+|+..++. ..|.+.
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~fl~~~~~~~~l~l~  190 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG---DFMCFLRCNSAHHRIAIL  190 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET---TTEEEEESSSBSCSEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC---CeEEEEecCCCcceEEEE
Confidence            346799999999999999999999999999875432   24567776432 334443

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.49  E-value=8.9e-07  Score=61.96  Aligned_cols=53  Identities=13%  Similarity=0.222  Sum_probs=40.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~~~   61 (86)
                      ..+.||.|.|+|+++|++||+++|||++..+....  ..+|+..++. ..|++...
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~l~~g~~~~~l~l~~~  211 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--QRALLGYADNQCKLELQGV  211 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--TEEEEESSTTSCEEEEEEC
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--cEEEEEeCCceEEEEECCC
Confidence            45899999999999999999999999997654332  3577887653 45666543

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.48  E-value=2.7e-07  Score=62.82  Aligned_cols=56  Identities=14%  Similarity=0.258  Sum_probs=40.3

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CC--------C-ceeEEEEecCCC-cEEEEEe
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NF--------G-EFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~--------~-~~~~~~l~~~~~-~~l~L~~   60 (86)
                      .+.+++||+|.|+|+++|++||+++|||++....  ..        + .....|+..++. ..+.+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~  206 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLP  206 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEES
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEec
Confidence            3578999999999999999999999999986421  10        1 134677776542 3466553

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=98.47  E-value=2.5e-07  Score=62.90  Aligned_cols=56  Identities=18%  Similarity=0.325  Sum_probs=40.0

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC----C-ceeEEEEecCC-CcEEEEEe
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF----G-EFKVIWLNLPG-AFALHLIE   60 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~----~-~~~~~~l~~~~-~~~l~L~~   60 (86)
                      .+.+++||.|.|+|+++|++||+++|||++......    + ....+|+..++ ...|.+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  200 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAA  200 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEEC
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEc
Confidence            457899999999999999999999999998643110    0 12456777643 24465553

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.46  E-value=9.1e-07  Score=64.15  Aligned_cols=60  Identities=13%  Similarity=0.256  Sum_probs=44.2

Q ss_pred             CccceeeEEEEEeCC--HHHHHHHHHHhhCCeEeeeC-------CCCceeEEEEecC-CCcEEEEEecCC
Q 037654            4 NIGATLNHISRESSD--IRRLADFYKEIFGFEEIEAP-------NFGEFKVIWLNLP-GAFALHLIERNP   63 (86)
Q Consensus         4 m~i~~i~HI~i~V~D--l~~s~~FY~~vLG~~~~~~~-------~~~~~~~~~l~~~-~~~~l~L~~~~~   63 (86)
                      ..+.+|+||++.|+|  ++++++||+++|||+.....       +.++.....+..+ +.+.|.|.+...
T Consensus       169 ~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~  238 (393)
T 3isq_A          169 CSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAP  238 (393)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEEC
T ss_pred             CCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCC
Confidence            347899999999998  99999999999999986431       1222444455543 358899987643

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=98.42  E-value=1.2e-06  Score=60.60  Aligned_cols=55  Identities=20%  Similarity=0.274  Sum_probs=39.8

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCC-cEEEEE
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~-~~l~L~   59 (86)
                      +.+.+++||+|.|+|++++++|| ++|||++....  ..+.....|+..++. ..+.+.
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~  205 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALT  205 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEe
Confidence            45789999999999999999999 99999986532  122235677776432 334444

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.42  E-value=2.5e-07  Score=65.36  Aligned_cols=57  Identities=19%  Similarity=0.326  Sum_probs=41.2

Q ss_pred             CccceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC----CCce--eEEEEecCCCcEEEEEec
Q 037654            4 NIGATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN----FGEF--KVIWLNLPGAFALHLIER   61 (86)
Q Consensus         4 m~i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~----~~~~--~~~~l~~~~~~~l~L~~~   61 (86)
                      ..+.+|+||+|.|+  |++++++||+++|||++.....    ..+.  ..+|+.. +...|+|.+.
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~-g~~~i~L~~~  218 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-GMIRIPLNEE  218 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-SSCEEEEEEE
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC-CCEEEEEeee
Confidence            34679999999999  9999999999999999864421    1111  2233333 3578898876

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.38  E-value=1.5e-06  Score=63.00  Aligned_cols=58  Identities=14%  Similarity=0.117  Sum_probs=43.8

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecCCCcEEEEEec
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+.+.+++||+|+|+|++++++||+++|||+.+...+    .......++..| ++.|.|.+.
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G-~i~~~L~~p   67 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG-KIVFVLSSA   67 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-TEEEEEEEE
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC-CEEEEEecC
Confidence            3567899999999999999999999999999876321    111234566665 678888763

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.34  E-value=6.8e-07  Score=63.09  Aligned_cols=54  Identities=19%  Similarity=0.134  Sum_probs=40.0

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEE
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      ++|.+.+++||.+.|+|++++.+|| ++|||+++.+....  ....+..+ ...|.+.
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~--~~~l~~~g-~~~l~l~   59 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK--NVHLYRQG-EINLILN   59 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS--SEEEEEET-TEEEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe--eEEEEecC-CEEEEEE
Confidence            3688999999999999999999999 79999987653222  33344543 4555544

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.34  E-value=4e-07  Score=62.29  Aligned_cols=47  Identities=23%  Similarity=0.435  Sum_probs=35.0

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCC----C-ceeEEEEecCC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNF----G-EFKVIWLNLPG   52 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~----~-~~~~~~l~~~~   52 (86)
                      .+.+++||+|.|+|+++|++|| ++|||++......    + ....+|+..++
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~  194 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCND  194 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSS
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCC
Confidence            3568999999999999999999 9999998643211    1 13456777643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.21  E-value=3.1e-06  Score=57.85  Aligned_cols=46  Identities=13%  Similarity=0.036  Sum_probs=32.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      ..+.|+.|.|+|++++++||+++|||++...........+++..++
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~  208 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGD  208 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEEETT
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcCC
Confidence            4689999999999999999999999998754311112344555553

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.21  E-value=7.7e-07  Score=60.87  Aligned_cols=46  Identities=17%  Similarity=0.319  Sum_probs=33.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--C--CC-ceeEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP--N--FG-EFKVIWLNLPG   52 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~--~~-~~~~~~l~~~~   52 (86)
                      +.+++||+|.|+|+++|++|| ++|||++....  +  .+ ....+|+..++
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~  197 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNA  197 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSS
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCC
Confidence            458999999999999999999 99999975321  1  11 13456776643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.16  E-value=1.1e-05  Score=55.46  Aligned_cols=54  Identities=11%  Similarity=0.090  Sum_probs=39.4

Q ss_pred             Cccce--eeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            4 NIGAT--LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         4 m~i~~--i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |.+.+  .-+..|.|+|++++.+||+++|||++..+.+    ..++|..+++..+.+++.
T Consensus         4 ~~~~~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~----~~a~lg~~~~~~~L~lEE   59 (244)
T 3e0r_A            4 MNVNQIVRIIPTLKANNRKLNETFYIETLGMKALLEES----AFLSLGDQTGLEKLVLEE   59 (244)
T ss_dssp             --CCCEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCEEEEEEE
T ss_pred             ccccceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC----cEEEeecCCCcceEEEEe
Confidence            44444  5578999999999999999999999987653    567888755554544443

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=97.87  E-value=5.3e-05  Score=48.07  Aligned_cols=52  Identities=19%  Similarity=0.151  Sum_probs=34.2

Q ss_pred             eeeEEEEEeCC--HHHHHHHHHHhhCCeEeeeC-------C--CCceeEEEEecCCCcEEEEEe
Q 037654            8 TLNHISRESSD--IRRLADFYKEIFGFEEIEAP-------N--FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         8 ~i~HI~i~V~D--l~~s~~FY~~vLG~~~~~~~-------~--~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .--++.|.|+|  +++|++||+++|||++....       .  .+....+.+.++ +..|.+..
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-g~~l~l~~   86 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCD   86 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET-TEEEEEEE
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC-CeEEEEeC
Confidence            34688999999  99999999999999986432       1  111234456665 44565543

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.85  E-value=2.7e-05  Score=53.00  Aligned_cols=32  Identities=13%  Similarity=0.023  Sum_probs=29.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .+.+++||.|.|+|++++.+|| ++|||+...+
T Consensus       155 ~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          155 QLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             GCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             HCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            4789999999999999999999 9999998765

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.82  E-value=0.00017  Score=44.87  Aligned_cols=26  Identities=12%  Similarity=-0.064  Sum_probs=23.7

Q ss_pred             EEEEEeC-CHHHHHHHHHHhhCCeEee
Q 037654           11 HISRESS-DIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus        11 HI~i~V~-Dl~~s~~FY~~vLG~~~~~   36 (86)
                      +..|.|. |+++|++||+++||+++..
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~   32 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEA   32 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEE
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEE
Confidence            4889999 9999999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=97.69  E-value=0.00029  Score=50.09  Aligned_cols=48  Identities=21%  Similarity=0.424  Sum_probs=36.0

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPG   52 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~   52 (86)
                      ..+.+++||.|.|+|++++.+||++ |||.+.+..  ..+....+|+..++
T Consensus       148 ~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~  197 (365)
T 4ghg_A          148 GELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKG  197 (365)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSS
T ss_pred             ccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCC
Confidence            3467999999999999999999976 999876432  22334567777654

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=97.64  E-value=0.00011  Score=49.18  Aligned_cols=44  Identities=9%  Similarity=-0.124  Sum_probs=31.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG   52 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~   52 (86)
                      ...++.+.|+|+++|++||+++|||++..+.... ....++..++
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~  226 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEFAEAALTP  226 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEEEEEESSS
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccEEEEEcCC
Confidence            3458899999999999999999999986332111 1334566653

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=97.64  E-value=0.00018  Score=44.80  Aligned_cols=33  Identities=12%  Similarity=0.106  Sum_probs=26.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhh-CCeEee
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIF-GFEEIE   36 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vL-G~~~~~   36 (86)
                      |++.++...-+.+.|.++|++||+++| |+++..
T Consensus         1 M~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~   34 (139)
T 1tsj_A            1 MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIIT   34 (139)
T ss_dssp             CCCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEE
T ss_pred             CCCCceeEEEEECCCHHHHHHHHHHHcCCCEEEE
Confidence            445567766666669999999999999 999863

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=97.57  E-value=0.00016  Score=44.63  Aligned_cols=54  Identities=17%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCC--CcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPG--AFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~--~~~l~L~~~   61 (86)
                      .+++|+++.|.|++++.+..++ .|.++...+...+...+|+.-.+  +..|+|+++
T Consensus       103 ~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          103 EGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGDFEGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccccCCeeEEEEeccccCcEEEEEEec
Confidence            4789999999999999998887 69988654333335677777544  678999875

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.50  E-value=0.00074  Score=41.10  Aligned_cols=28  Identities=14%  Similarity=0.190  Sum_probs=24.1

Q ss_pred             eeeEEEEEeC--CHHHHHHHHHHhh-CCeEee
Q 037654            8 TLNHISRESS--DIRRLADFYKEIF-GFEEIE   36 (86)
Q Consensus         8 ~i~HI~i~V~--Dl~~s~~FY~~vL-G~~~~~   36 (86)
                      ++. ..|.|.  |+++|++||+++| |+++..
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~   36 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQ   36 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEE
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeE
Confidence            555 778887  9999999999999 999864

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=97.16  E-value=0.0029  Score=40.99  Aligned_cols=49  Identities=8%  Similarity=0.111  Sum_probs=34.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeC---C-------------CCceeEEEEecCCCcEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAP---N-------------FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~-------------~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .-.|.++|.+++++||+++||++++...   +             .+..-.+.|.++ +..|.+..
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~-g~~lm~~D   92 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL-GVKVLCSD   92 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET-TEEEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC-CEEEEEEC
Confidence            4567777999999999999999975321   1             123456778886 45666654

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=97.14  E-value=0.0025  Score=37.65  Aligned_cols=54  Identities=22%  Similarity=0.306  Sum_probs=39.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC----CCCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP----NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~----~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|++++.+..++ .|.++...+    ...+...+|+.-.++..|+|+++
T Consensus        76 ~g~~hiaf~v~di~~~~~~l~~-~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           76 STPYHICYEVEDIQKSIEEMSQ-IGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHTT-TTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-cCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            5788999999999998887765 688875432    22235677887666788998863

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=96.82  E-value=0.0088  Score=34.99  Aligned_cols=55  Identities=15%  Similarity=0.116  Sum_probs=40.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+..|+++.|.|++++.+..++ .|.++...+...+...+|+.-.++..|+|++..
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            3678999999999998888776 688876554332345666665567889988753

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=96.65  E-value=0.019  Score=35.52  Aligned_cols=49  Identities=16%  Similarity=0.192  Sum_probs=33.4

Q ss_pred             EEEEEeC-CHHHHHHHHHHhhC-CeEeee-------C-CCCceeEEEEecCCCcEEEEEe
Q 037654           11 HISRESS-DIRRLADFYKEIFG-FEEIEA-------P-NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        11 HI~i~V~-Dl~~s~~FY~~vLG-~~~~~~-------~-~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .-.|.++ |.+++++||+++|| .++...       + ..+..-.+.|.++ +..|.+..
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~-g~~lm~~d   70 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN-GQEFMCID   70 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET-TEEEEEEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC-CEEEEEEc
Confidence            4567777 89999999999999 565321       1 1233556778886 45666654

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=96.46  E-value=0.012  Score=36.17  Aligned_cols=57  Identities=19%  Similarity=0.240  Sum_probs=41.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee-C--CCCceeEEEEe--cCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA-P--NFGEFKVIWLN--LPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~-~--~~~~~~~~~l~--~~~~~~l~L~~~~~~   64 (86)
                      .++.|+++.|.|++++.+-.++ .|.++... +  ...+...+|+.  -.++..|+|++....
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence            4799999999999999998886 78887543 2  22224566772  344688999987654

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=96.41  E-value=0.013  Score=33.90  Aligned_cols=53  Identities=19%  Similarity=0.252  Sum_probs=37.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.|++++.+-.++ .|.++...+  ...+...+++.-.++..|+|++
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            4788999999999999998876 788775322  1222456666655677888764

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=96.34  E-value=0.04  Score=32.05  Aligned_cols=56  Identities=14%  Similarity=0.253  Sum_probs=38.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.|.|++++.+..++ .|.++...+   ..+....+|+.-.++..|+|++...
T Consensus        70 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           70 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            3678999999999998888776 788876432   2232245566655678899987643

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.07  E-value=0.034  Score=38.38  Aligned_cols=33  Identities=9%  Similarity=0.180  Sum_probs=30.0

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      ..+|.+|.|.++|.+++++.|+++||++.....
T Consensus       188 a~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          188 QFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             TEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            579999999999999999999999999986553

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=96.07  E-value=0.03  Score=33.33  Aligned_cols=55  Identities=11%  Similarity=0.110  Sum_probs=39.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.|++++.+-.++ .|.++...+.  ..+...+|+.-.++..|+|++..
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            4688999999999999998876 7888754321  12245666665557889998754

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=96.04  E-value=0.028  Score=32.40  Aligned_cols=53  Identities=19%  Similarity=0.175  Sum_probs=36.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEE--ecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWL--NLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l--~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.|++++.+..++ .|.++...+   ...+....|+  .-.++..|+|++
T Consensus        76 ~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           76 GGMHHICIEVDNINAAVMDLKK-KKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            4789999999999998888876 688764332   1222345666  334467788875

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=95.99  E-value=0.029  Score=35.01  Aligned_cols=56  Identities=16%  Similarity=0.368  Sum_probs=40.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC-ceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG-EFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|++|.|.|++++.+-.++ .|.++...+... ....+|+.-.++..|+|++...
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSSTTCEEEECTTCCEEEEECGGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCcceEEEEECCCCCEEEEEEccc
Confidence            3788999999999999988876 699887654221 1234566655678899997643

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=95.95  E-value=0.041  Score=32.73  Aligned_cols=56  Identities=11%  Similarity=0.087  Sum_probs=39.8

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC-CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN-FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~-~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.|.  |++++.+..++ .|.++...+. ......+|+.-.++..|+|+....
T Consensus        95 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           95 TRAYHLAFDIDPQLFDRAVTVIGE-NKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSCCEEEEECCGGGHHHHHHHHHH-TTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECCC
T ss_pred             CceEEEEEEecHHHHHHHHHHHHH-CCCccccCceecCCccEEEEECCCCCEEEEEecCC
Confidence            57899999998  99999998876 6888754321 111245666655678899987654

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=95.88  E-value=0.03  Score=32.08  Aligned_cols=53  Identities=25%  Similarity=0.357  Sum_probs=36.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|+|++++.+..++ .|.++...+  ...+...+|+.-.++..|+|++
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            4688999999999999887776 687764322  1122355666655577788763

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=95.83  E-value=0.028  Score=33.27  Aligned_cols=55  Identities=18%  Similarity=0.309  Sum_probs=37.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEee-eCC--CCceeEEEE--ecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIE-APN--FGEFKVIWL--NLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~-~~~--~~~~~~~~l--~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.|++++.+..++ .|.++.. .+.  ..+...+|+  .-.++..|+|++..
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l~~-~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CceEEEEEECCCHHHHHHHHHH-CCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            5789999999999999988876 6887652 221  122345565  33346788888753

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=95.71  E-value=0.046  Score=34.11  Aligned_cols=55  Identities=16%  Similarity=0.378  Sum_probs=39.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC-ceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG-EFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|++|.|.|++++.+..++ .|.++...+... ....+|+.-.++..|+|++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            4788999999999999998886 699876544221 123456665567889998754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=95.55  E-value=0.15  Score=29.29  Aligned_cols=52  Identities=23%  Similarity=0.360  Sum_probs=38.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+..|+++.|.|++++.+-.++ .|.++...+   ..+ ...+++.-.++..++|.+
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWG-QRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTS-CEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCC-CEEEEEECCCCCEEEEEe
Confidence            4678999999999999998886 698876322   233 255666655677888875

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=95.50  E-value=0.12  Score=30.75  Aligned_cols=52  Identities=12%  Similarity=0.138  Sum_probs=37.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .++.|+++.|.|++++.+..++ .|.++...  .+....+|+.-.++..|+|++.
T Consensus        76 ~~~~h~~f~v~d~~~~~~~l~~-~G~~~~~~--~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           76 EAYGHIAIGVEDVKELVADMRK-HDVPIDYE--DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             SSEEEEEEEESCHHHHHHHHHH-TTCCEEEE--CSSSSEEEEECTTSCEEEEEEH
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecc--CCcEEEEEEECCCCCEEEEEEc
Confidence            4678999999999998887776 68887654  2212343666556788998864

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=95.16  E-value=0.095  Score=31.86  Aligned_cols=54  Identities=15%  Similarity=0.148  Sum_probs=37.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-CCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN-FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ++.|+++.|.|++++.+-.++ .|.++...+. ......+||.=.++..|+|++..
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            567999999999999888776 7888754321 11135566665557889998754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=95.06  E-value=0.25  Score=31.54  Aligned_cols=48  Identities=17%  Similarity=0.178  Sum_probs=33.6

Q ss_pred             EEEEeC-CHHHHHHHHHHhh-CCeEee--eC-------CCCceeEEEEecCCCcEEEEEe
Q 037654           12 ISRESS-DIRRLADFYKEIF-GFEEIE--AP-------NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        12 I~i~V~-Dl~~s~~FY~~vL-G~~~~~--~~-------~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ..|.++ |.+++++||+++| |.++..  +-       +.+.+-.+.|.+++ ..|-+..
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g-~~~m~~d   67 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG-IPCLGLN   67 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT-EEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC-EEEEEEC
Confidence            457777 9999999999999 998863  21       12346667888864 4555543

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=94.92  E-value=0.18  Score=29.25  Aligned_cols=57  Identities=19%  Similarity=0.190  Sum_probs=39.7

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.|+++.|.  |++++.+-.++ .|.++...+.  ......+++.-.++..|+|.+....
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  125 (133)
T 2p7o_A           65 RTYNHIAFQIQSEEVDEYTERIKA-LGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLE  125 (133)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCChH
Confidence            46789999995  89888887775 6888764432  1223556666556788999876543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=94.67  E-value=0.11  Score=29.95  Aligned_cols=57  Identities=9%  Similarity=0.163  Sum_probs=39.7

Q ss_pred             cceeeEEEEEeCC-HHHHHHHHHHhhCCeEeeeC----CC-CceeEEEEecCCCcEEEEEecCC
Q 037654            6 GATLNHISRESSD-IRRLADFYKEIFGFEEIEAP----NF-GEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~D-l~~s~~FY~~vLG~~~~~~~----~~-~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      ..+..|+++.|.| ++++.+..++ .|.++...+    .. +....+++.-.++..|+|++..+
T Consensus        70 ~~~~~~~~~~v~dd~~~~~~~l~~-~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           70 RVGSADLCFITDTVLSDAMKHVED-QGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             CTTCCEEEEECSSCHHHHHHHHHH-TTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             CCCccEEEEEeCcHHHHHHHHHHH-CCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            3467999999997 9999998886 588875432    11 11245666655678899987643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=94.52  E-value=0.23  Score=30.12  Aligned_cols=54  Identities=15%  Similarity=0.213  Sum_probs=38.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      +..|+++.|.|++++.+-.++ .|.++...+   ..+  ..+++.-.++..|+|++....
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC-
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCc
Confidence            458999999999998887776 788875432   222  455666556789999986543

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=94.45  E-value=0.26  Score=28.08  Aligned_cols=53  Identities=11%  Similarity=0.140  Sum_probs=33.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC--CCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN--FGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .++.|+++.|.|.+...++|..+  .|.++...+.  ..+...+++.-.++..|+|+
T Consensus        70 ~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           70 LGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            45899999999955555555554  6888754321  11234556665556777775

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=94.43  E-value=0.16  Score=30.02  Aligned_cols=55  Identities=20%  Similarity=0.243  Sum_probs=37.9

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.  |++++.+..++ .|.++...+.  ......+|+.-.++..|++.+..
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            46889999999  88888887776 6887654321  11235566665567889998754

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=94.39  E-value=0.27  Score=29.05  Aligned_cols=54  Identities=13%  Similarity=0.114  Sum_probs=38.4

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.  |++++.+-.++ .|.++...+... ...+++.-.++..|+|++..
T Consensus        63 ~~~~hi~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           63 SDYTHYAFTVAEEDFEPLSQRLEQ-AGVTIWKQNKSE-GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             SCSCEEEEECCHHHHHHHHHHHHH-TTCCEEECCCSS-SEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCHHHHHHHHHHHHH-CCCeEeccCCCc-eeEEEEECCCCCEEEEEECc
Confidence            46889999997  78887777765 688876543322 35566665567889998754

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=94.35  E-value=0.12  Score=30.46  Aligned_cols=54  Identities=17%  Similarity=0.098  Sum_probs=38.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+..|+++.|.|++++.+-.++  |.++...+   ..+ ...+++.-.++..++|.+...
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC-
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCC-CEEEEEECCCCCEEEEEecch
Confidence            4678999999999999888887  98865332   222 355666655678899987643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=94.28  E-value=0.13  Score=30.26  Aligned_cols=54  Identities=19%  Similarity=0.210  Sum_probs=34.5

Q ss_pred             ceeeEEEEEe---CCHHHHHHHHHHhhCCeEeee--CCCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRES---SDIRRLADFYKEIFGFEEIEA--PNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V---~Dl~~s~~FY~~vLG~~~~~~--~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .++.|+++.|   .|++++.+-.++ .|.++...  ...+  ..+|+.-.++..|+|.+...
T Consensus        71 ~g~~h~~f~v~~~~d~~~~~~~l~~-~G~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           71 PGLDHLSFSVESMTDLDVLEERLAK-AGAAFTPTQELPFG--WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             SEEEEEEEEESSHHHHHHHHHHHHH-HTCCBCCCEEETTE--EEEEEECTTCCEEEEEEECT
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHH-CCCcccCccccCCc--eEEEEECCCCCEEEEEEcCC
Confidence            5789999999   566666555554 57775421  1222  45666655678899987544

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=94.21  E-value=0.26  Score=28.87  Aligned_cols=54  Identities=17%  Similarity=0.165  Sum_probs=37.9

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|.  |++++.+-.++ .|.++...+... ...+++.-.++..|+|.+..
T Consensus        60 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           60 ADYTHYAFGIAAADFARFAAQLRA-HGVREWKQNRSE-GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             SSSCEEEEEECHHHHHHHHHHHHH-TTCCEEECCCSS-SCEEEEECTTCCEEEEESCC
T ss_pred             CCcceEEEEccHHHHHHHHHHHHH-CCCceecCCCCC-eEEEEEECCCCCEEEEEECC
Confidence            46789999998  88887777765 688876543322 35566665567889998654

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=94.11  E-value=0.28  Score=27.84  Aligned_cols=52  Identities=13%  Similarity=0.239  Sum_probs=37.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ...|+++.|.|++++.+..++ .|.++...+   ..+ ...+++.-.++..++|++.
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            567999999999999988876 687764322   222 3556666556788888764

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=94.03  E-value=0.3  Score=29.57  Aligned_cols=51  Identities=8%  Similarity=0.006  Sum_probs=36.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeC-C-CCceeEEEEecCCCcEEEEEecC
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAP-N-FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~-~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |+++.|.|++++.+-.++ .|.++...+ . .+....+|+.-.++..|+|++..
T Consensus        93 ~l~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           93 VVTVDVESIESALERIES-LGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEEECSCHHHHHHHHHH-TTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHH-cCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence            999999999999888876 688875432 1 11125566665567889998754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=93.58  E-value=0.15  Score=31.12  Aligned_cols=55  Identities=5%  Similarity=0.103  Sum_probs=34.8

Q ss_pred             ceeeEEEEEe---CCHHHHHHHHHHhhCCeEeeeCCC-CceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRES---SDIRRLADFYKEIFGFEEIEAPNF-GEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V---~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .++.|+++.|   .|++++.+-.++ .|.++...+.. .+...+++.-.++..|+|++..
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHH-CCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            4679999999   555555555544 47776533211 1245666665567889999754

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=93.03  E-value=0.23  Score=29.26  Aligned_cols=53  Identities=13%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHh--hCCeEe--eeCCCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEI--FGFEEI--EAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~--~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ++.|+++.|.|++...+.|..+  .|.++.  ..+...... .|+.-.++..|+|++.
T Consensus        77 ~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g-~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           77 PDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG-VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             TTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE-EEEECTTCCEEEEESS
T ss_pred             CccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC-eEEECCCCCEEEEEEc
Confidence            5689999999994444444443  577765  221111112 2455556788999865

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=92.74  E-value=0.69  Score=27.08  Aligned_cols=54  Identities=15%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             ceeeEEEEEeC---CHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS---DIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~---Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+..|+++.|.   |++++.+-.++ .|.++...+   ..+ ...+|+.-.++..|+|.+..
T Consensus        70 ~~~~~l~f~v~~~~dv~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           70 GHRFAIAFEFPDTASVDKKYAELVD-AGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             SCSEEEEEECSSHHHHHHHHHHHHH-TTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             CCeEEEEEEeCCHHHHHHHHHHHHH-CCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            46789999999   77777666655 588765332   222 45566665567889998764

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=92.50  E-value=0.58  Score=27.84  Aligned_cols=56  Identities=16%  Similarity=0.214  Sum_probs=38.6

Q ss_pred             ceeeEEEEEeC-CHHHHHHHHHHhhCCeEeeeC----C-CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESS-DIRRLADFYKEIFGFEEIEAP----N-FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~-Dl~~s~~FY~~vLG~~~~~~~----~-~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+..|+++.+. |++++.+..++ .|.++...+    . .+....+|+.-.++..|+|.....
T Consensus        84 ~g~~hi~f~~~~dl~~~~~~l~~-~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           84 PGSADLCFITSTPINDVVSEILQ-AGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             TTCCEEEEEESSCHHHHHHHHHH-TTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             CCccEEEEEecCCHHHHHHHHHH-CCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            46789999998 99999998876 788764332    1 111255666656678899987654

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=92.14  E-value=0.85  Score=27.18  Aligned_cols=54  Identities=7%  Similarity=0.034  Sum_probs=36.3

Q ss_pred             ceeeEEEEEe---CCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRES---SDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V---~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+..|+++.|   .|++++.+-.++ .|.++...+   ..+ ...+++.-.++..|+|++.+
T Consensus        68 ~~~~~l~f~v~~~~dv~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           68 PGSMALAHNVRAETEVAPLMERLVA-AGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             CCSCEEEEECSSGGGHHHHHHHHHH-TTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECT
T ss_pred             CCeEEEEEEeCCHHHHHHHHHHHHH-CCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCC
Confidence            4678999999   677776666654 688875432   123 35566665567889998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=92.09  E-value=0.69  Score=27.47  Aligned_cols=53  Identities=15%  Similarity=0.169  Sum_probs=36.1

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+..|+++.|.  |++++.+..++ .|.++....  ..+....+|+.-.++..|+|+.
T Consensus        84 ~~~~h~~~~v~~~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           84 WQQQHFSFRVEKSEIEPLKKALES-KGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCCCEEEEEECGGGHHHHHHHHHH-TTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             CCCceEEEEEeHHHHHHHHHHHHH-CCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            46789999998  89988888776 688765221  1222355666655677888764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=91.80  E-value=1  Score=25.45  Aligned_cols=50  Identities=18%  Similarity=0.339  Sum_probs=34.7

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .|+++.|.|++++.+-.++ .|.++...+   ..+ ...+++.-.++..++|++.
T Consensus        65 ~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           65 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             EEEEEEECCHHHHHHHHHH-CCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            3899999999999888876 688764332   222 3455666555678888753

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=91.77  E-value=1.1  Score=25.79  Aligned_cols=55  Identities=25%  Similarity=0.295  Sum_probs=38.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeE-------eeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEE-------IEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~-------~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+..|+++.|.|++++.+-.++ .|.++       ...+   ..+ ...+++.-.++..+++.+...
T Consensus        57 ~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           57 ASWFSCCLRLDDLAEFYRQCKS-VGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             GCCCEEEEEESCHHHHHHHHHH-TTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC
T ss_pred             CcceEEEEEECCHHHHHHHHHH-CCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchh
Confidence            3578999999999999888876 58773       3222   222 355666656678899987643

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=91.56  E-value=1.2  Score=25.83  Aligned_cols=53  Identities=13%  Similarity=0.263  Sum_probs=33.6

Q ss_pred             ceeeEEEEEeCC---HHHHHHHHHHh--hCCeEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSD---IRRLADFYKEI--FGFEEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~D---l~~s~~FY~~v--LG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+..|+++.|.|   ++++.+-.++.  .|.++...+   ..+  ..+++.-.++..|+|+..
T Consensus        71 ~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           71 PRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             CCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            467899999998   55555555443  677765332   222  445555555778888763

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=91.48  E-value=0.66  Score=27.78  Aligned_cols=55  Identities=7%  Similarity=0.004  Sum_probs=35.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCCC-CceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPNF-GEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~~-~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+..|+++.|.|.+...++|..+  .|.++...+.. .....+++.-.++..|+|++.
T Consensus        85 ~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           85 GGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             SSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEE
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEec
Confidence            46889999999876666667665  47765432210 112445665555788888764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=91.38  E-value=0.68  Score=31.82  Aligned_cols=49  Identities=10%  Similarity=0.096  Sum_probs=34.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhC-----CeEeee---CCCCceeEEEEecCCCcEEEEEecCCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFG-----FEEIEA---PNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG-----~~~~~~---~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      +.++||+.+.|++++        .||     |++...   +.++ .....+.+ ++..|||+...+.
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~G-T~N~Li~f-dg~YLElIai~~~   78 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYG-TFNKLGYI-NENYIELLDVENN   78 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTT-EEEEEEEC-SSSEEEEEEESCH
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCC-CEEEEEee-CCEEEEEEeecCc
Confidence            479999999999884        467     887543   3344 34445555 4688999987653

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=90.91  E-value=1  Score=25.95  Aligned_cols=52  Identities=12%  Similarity=0.149  Sum_probs=35.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh-----CC--eEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIF-----GF--EEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL-----G~--~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +..|+++.|.|+++..+..++.+     |.  ++...+   ..+  ..+++.-.++..|++.+.
T Consensus        60 ~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           60 DNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             GGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEe
Confidence            34699999999999988887753     77  654332   122  455565555788888764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=90.65  E-value=1.6  Score=25.50  Aligned_cols=55  Identities=16%  Similarity=0.161  Sum_probs=35.9

Q ss_pred             eeEEEEEeCCHHHHHHHHHH---hhCCeEee---eCCCCceeEEEEecCCCcEEEEEecCCC
Q 037654            9 LNHISRESSDIRRLADFYKE---IFGFEEIE---APNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~---vLG~~~~~---~~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      -.|++|.|.|+++..+-.++   .+|.++..   ....+ ...+++.-.++..|+|.+....
T Consensus        67 ~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           67 RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             -EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECCT
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEcccc
Confidence            35999999999998887764   24544322   22223 3556666556788999886654

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=90.51  E-value=1.6  Score=25.49  Aligned_cols=53  Identities=11%  Similarity=0.043  Sum_probs=33.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHh--hCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654           10 NHISRESSDIRRLADFYKEI--FGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .|+++.|.|.+...++|..+  .|.++...+   ..+ ...+|+.-.++..|+|.+...
T Consensus        77 ~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           77 FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEccc
Confidence            39999999744444445444  588765432   222 456666655678899987543

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=90.49  E-value=1.4  Score=25.16  Aligned_cols=51  Identities=12%  Similarity=0.092  Sum_probs=34.1

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhh-----CC--eEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654            9 LNHISRESSDIRRLADFYKEIF-----GF--EEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vL-----G~--~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ..|+++.|.|+++..+-.++.+     |.  ++...+   ..+  ..+++.-.++..|++.+.
T Consensus        61 ~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           61 NTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            3699999999999888777642     77  654332   222  445555555778888763

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=90.41  E-value=1.4  Score=25.71  Aligned_cols=52  Identities=15%  Similarity=0.082  Sum_probs=33.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhhCCe-EeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            9 LNHISRESSDIRRLADFYKEIFGFE-EIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         9 i~HI~i~V~Dl~~s~~FY~~vLG~~-~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      -.|++|.|.|++++.+-.++ .|.+ +...+   ..+ .. +++.=.++..|+|.+.+.
T Consensus        67 ~~~l~f~v~dvd~~~~~l~~-~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           67 SLQLGFQITDLEKTVQELVK-IPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             SEEEEEEESCHHHHHHHHTT-STTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC---
T ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEecc
Confidence            35799999999998887765 6888 54322   233 34 556555577888887543

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=90.26  E-value=0.95  Score=27.06  Aligned_cols=53  Identities=17%  Similarity=0.277  Sum_probs=33.0

Q ss_pred             ceeeEEEEEeC---CHHHHHHHHHHhhCCeEeee-CC---CC-ceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESS---DIRRLADFYKEIFGFEEIEA-PN---FG-EFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~---Dl~~s~~FY~~vLG~~~~~~-~~---~~-~~~~~~l~~~~~~~l~L~~   60 (86)
                      .++.|+++.|.   |++++.+..++ .|.++... +.   .+ +...+|+.-.++..|+|++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l~~-~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKLKE-RGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHHHH-HTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHH-cCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            46799999999   55555555544 58776542 21   11 1345666655577888864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=89.59  E-value=2.1  Score=25.31  Aligned_cols=54  Identities=11%  Similarity=0.053  Sum_probs=37.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeC-CCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEIF--GFEEIEAP-NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~-~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +..|+++.|.+.+...++|..+.  |.++...+ ..+....+|+.=.++..|+|+..
T Consensus        77 ~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           77 TEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             BSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             CeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            45699999999998889998865  66654433 12223455666556788998854

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=89.55  E-value=1.9  Score=24.94  Aligned_cols=52  Identities=8%  Similarity=0.017  Sum_probs=36.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .|+++.|.|+++..+-.++ .|.++...+   ..+ ...+++.-.++..++|.+...
T Consensus        70 ~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           70 KQVIVWVSDVDEHFMRSTA-AGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC-
T ss_pred             EEEEEEeCCHHHHHHHHHH-cCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEcC
Confidence            3999999999998877765 688875432   223 355666655678899987643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=89.37  E-value=0.41  Score=26.92  Aligned_cols=51  Identities=16%  Similarity=0.302  Sum_probs=29.3

Q ss_pred             ceeeEEEEEe---CCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRES---SDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V---~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+..|+++.|   .|++++.+-.++ .|.++......+ ...+++.-.++..|+++
T Consensus        59 ~~~~~~~~~v~~~~d~~~~~~~l~~-~G~~~~~p~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           59 PKTFHVGFPQESEEQVDKINQRLKE-DGFLVEPPKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CTTCCEEEECSSHHHHHHHHHHHHH-TTCCCCCCEEC--CEEEEEEETTTEEEEEE
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHH-CCCEEecCcCCC-cEEEEEECCCCcEEEEe
Confidence            4678999999   555555555443 577653211111 24555554556777764

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=89.30  E-value=2.1  Score=25.18  Aligned_cols=54  Identities=15%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---------CCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPN---------FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---------~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      ++. ++|.|.|++++.+-.++..|.++...+.         ..+...+++.-.++..|+|++..
T Consensus        74 g~~-~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           74 GVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             TEE-EEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             ceE-EEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            454 9999999999988877646776643221         11124455554557889988753

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=86.13  E-value=3.8  Score=24.47  Aligned_cols=56  Identities=13%  Similarity=0.104  Sum_probs=34.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .+..|+++.|.|.+...++|..+  .|.++...+   ..+  ..+++.-.++..|+|......
T Consensus        66 ~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           66 GGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             --CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             CCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            35679999999955555566554  588775332   222  445565556788999876553

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=85.69  E-value=3.8  Score=24.17  Aligned_cols=53  Identities=13%  Similarity=0.152  Sum_probs=34.8

Q ss_pred             ceeeEEEEEeC-CHHHHHHHHHHhhCCeEeeeC-----CCCceeEEEEecCCCcEEEEEe
Q 037654            7 ATLNHISRESS-DIRRLADFYKEIFGFEEIEAP-----NFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         7 ~~i~HI~i~V~-Dl~~s~~FY~~vLG~~~~~~~-----~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      .+..|+++.+. |++++.+..++ .|.++...+     ..+....+|+.-.++..|+|.+
T Consensus        88 ~g~~~~~~~~~~dl~~~~~~l~~-~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           88 PGSLDICLITEVPLEEMIQHLKA-CDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             TTCCEEEEECSSCHHHHHHHHHH-TTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             CCCceEEEEeccCHHHHHHHHHH-cCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            35678899886 99999998876 788765322     1111234556555577888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-04
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	7e-04
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	8e-04
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.001
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	0.001
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	0.002
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	0.002
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.003

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 1e-04
 Identities = 12/74 (16%), Positives = 19/74 (25%)

Query: 2  PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER 61
          P      L        D ++  DFY  + G   I+  +F   K     L       + + 
Sbjct: 17 PSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKE 76

Query: 62 NPGTKLPEGPYSTT 75
                       T
Sbjct: 77 KDEKIAWALSRKAT 90

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 33.8 bits (76), Expect = 7e-04
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIE 36
          LNH++   SD+++   F+ E+ G     
Sbjct: 5  LNHLTLAVSDLQKSVTFWHELLGLTLHA 32

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 33.7 bits (76), Expect = 8e-04
 Identities = 7/47 (14%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEI---EAPNFGEFKVIWLNLPG 52
          L+H++    D+ R+    + +F   E+   +   F   +  +  +  
Sbjct: 5  LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD 51

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 33.2 bits (74), Expect = 0.001
 Identities = 5/39 (12%), Positives = 14/39 (35%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIW 47
          + H++   +D+    +F ++ FG             +  
Sbjct: 4  IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD 42

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 33.4 bits (75), Expect = 0.001
 Identities = 5/39 (12%), Positives = 12/39 (30%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIW 47
           +H      ++    D + ++ GF   E         + 
Sbjct: 6  FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVA 44

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 32.7 bits (73), Expect = 0.002
 Identities = 8/49 (16%), Positives = 17/49 (34%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALH 57
           +HIS  + +      FYK + G   ++     +   ++    G     
Sbjct: 7  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS 55

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 32.6 bits (73), Expect = 0.002
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLN 49
            H+     D+ +  + Y E+ G  E++  + G   +    
Sbjct: 8  PGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWT 48

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 32.2 bits (72), Expect = 0.003
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 9  LNHISRESSDIRRLADFYKEIFGFEEIEAPN 39
          LNH++   +D+     FY+++ GF      +
Sbjct: 5  LNHLTLAVADLPASIAFYRDLLGFRLEARWD 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.3
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.26
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.26
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.24
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.2
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.2
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.18
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.16
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.15
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.1
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.09
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.09
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.09
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.07
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.07
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.06
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.04
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.04
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.02
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.02
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.97
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.85
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.85
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	98.8
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.77
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	98.77
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.73
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.66
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	98.53
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.38
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.33
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.32
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.29
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.17
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.0
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	97.93
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	97.36
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	97.33
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	97.28
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	97.13
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	97.08
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	97.03
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	96.82
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	96.44
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	96.41
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	96.3
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	96.09
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	95.72
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	95.38
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	94.89
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	93.9
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	93.52
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	92.73
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	92.2
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	91.43
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	90.6
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	90.59
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	90.45
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	90.24
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	89.91
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	89.86
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	89.43
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	88.99
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	87.07
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	86.32
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	85.15
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	83.63
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	81.91

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.30  E-value=3.8e-12  Score=77.31  Aligned_cols=52  Identities=12%  Similarity=0.178  Sum_probs=41.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCC-cEEEEEe
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGA-FALHLIE   60 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~-~~l~L~~   60 (86)
                      .|++|+||+|.|+|+++|++||+++|||++..+.+    ..+||+.++. ..|.|..
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC----cceEEeecCCceEEEEec
Confidence            37899999999999999999999999999987653    4678887653 3455543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.26  E-value=8.3e-12  Score=75.96  Aligned_cols=51  Identities=8%  Similarity=0.060  Sum_probs=41.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCc-EEEEE
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAF-ALHLI   59 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~-~l~L~   59 (86)
                      .|++|+||+|.|+|+++|++||+++|||++..+..    ..+||+.++.. .+.+.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~~~   52 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQ   52 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ceeeeeeeecceeeeee
Confidence            37899999999999999999999999999987653    46788886543 34443

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.26  E-value=1.6e-11  Score=71.60  Aligned_cols=54  Identities=15%  Similarity=0.267  Sum_probs=42.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      ++|+||+|.|+|+++|++||+++|||++..+.+.   ...++..+++..+.++....
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TEEEEECTTCCEEEEEECSS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---cceeeeecceeeeeeeeeec
Confidence            4789999999999999999999999999766532   34555655567788776543

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.24  E-value=2.7e-11  Score=73.69  Aligned_cols=35  Identities=20%  Similarity=0.356  Sum_probs=32.2

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      |++|++|+||+|.|+|+++|++||+++|||++..+
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~   35 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKM   35 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEee
Confidence            45789999999999999999999999999998754

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.20  E-value=3.2e-11  Score=75.42  Aligned_cols=50  Identities=16%  Similarity=0.254  Sum_probs=37.7

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGA   53 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~   53 (86)
                      |...+++||+|.|+|+++|++||+++|||++.++.  ........|+..++.
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~   52 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK   52 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc
Confidence            55678999999999999999999999999987543  222244455565443

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.20  E-value=5.9e-11  Score=74.06  Aligned_cols=60  Identities=12%  Similarity=0.083  Sum_probs=44.6

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC----CCceeEEEEecCCCcEEEEEecCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN----FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      ++.|.+++||+|+|+|+++|++||+++|||+++.+..    ......+.+..+ +..+.|.+...
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-~~~i~l~~~~~   65 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-SARFVLTSVIK   65 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-TEEEEEEEESS
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-CEEEEEeccCC
Confidence            5679999999999999999999999999999875421    112334445553 57777776443

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.18  E-value=9.2e-11  Score=70.00  Aligned_cols=56  Identities=14%  Similarity=0.275  Sum_probs=43.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC---CCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN---FGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +.+|+||+|.|+|+++|++||+++|||++..+..   .......++..+ +..+++....
T Consensus         2 i~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   60 (130)
T d1r9ca_           2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG-DIWVAIMQGE   60 (130)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET-TEEEEEEECC
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC-CEEEeecccc
Confidence            6799999999999999999999999999876532   222456677775 4667766543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=1.1e-10  Score=70.13  Aligned_cols=52  Identities=23%  Similarity=0.367  Sum_probs=41.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      |.+|+||+|.|+|++++++||+++|||++..+.+    ...++..+ +..++.....
T Consensus         2 i~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~----~~~~~~~~-~~~~~~~~~~   53 (134)
T d1nkia_           2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELG-SLWLCLSREP   53 (134)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEET-TEEEEEEECT
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc----ceeeeecC-CeEEEEeeec
Confidence            7899999999999999999999999999876643    34667775 4566665443

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.15  E-value=1.1e-10  Score=70.59  Aligned_cols=51  Identities=22%  Similarity=0.294  Sum_probs=39.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      |++|+||+|.|+|++++++||+++|||++..+.+    ...++..+ +..+.+...
T Consensus         2 i~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~-~~~~~l~~~   52 (140)
T d1npba_           2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCG-DLWVCLSYD   52 (140)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEET-TEEEEEEEC
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cccccccc-cccceeecc
Confidence            6899999999999999999999999999976643    34566665 344555443

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.10  E-value=1.1e-10  Score=73.70  Aligned_cols=37  Identities=16%  Similarity=0.334  Sum_probs=33.4

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN   39 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~   39 (86)
                      .++|++++||+|.|+|+++|++||+++|||+++.+.+
T Consensus         7 ~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~   43 (170)
T d1zswa2           7 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND   43 (170)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS
T ss_pred             hHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC
Confidence            3468999999999999999999999999999987653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.09  E-value=4.5e-10  Score=67.32  Aligned_cols=58  Identities=14%  Similarity=0.249  Sum_probs=41.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEec-----CCCcEEEEEecCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNL-----PGAFALHLIERNP   63 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~-----~~~~~l~L~~~~~   63 (86)
                      +.+|+||+|.|+|+++|++||+++||+++....  ...+...++...     .+...+++++...
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~   69 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   69 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhc
Confidence            789999999999999999999999999986442  112233333321     2356788876543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.09  E-value=2.1e-10  Score=67.86  Aligned_cols=50  Identities=14%  Similarity=0.161  Sum_probs=40.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecC
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      +|+||.|.|+|+++|++||+++||+++....+    ..++|..+ +..|.|....
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~~~~g-~~~l~l~~~~   51 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIG-SHCLMLSQNH   51 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEET-TEEEEEESSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEEEEEc-Cceeeeeecc
Confidence            68999999999999999999999999865432    45778886 5677776543

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.09  E-value=5.4e-11  Score=70.24  Aligned_cols=32  Identities=22%  Similarity=0.348  Sum_probs=29.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      ++++||+|.|+|+++|++||+++|||++..+.
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~   33 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKW   33 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccc
Confidence            58999999999999999999999999997553

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.07  E-value=5.3e-10  Score=67.53  Aligned_cols=57  Identities=14%  Similarity=0.177  Sum_probs=41.9

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC-------------CCceeEEEEecCC-CcEEEEEec
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN-------------FGEFKVIWLNLPG-AFALHLIER   61 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~-------------~~~~~~~~l~~~~-~~~l~L~~~   61 (86)
                      -++.+++||+|.|+|+++|.+||++ |||++..+..             ......+++...+ ...++|++.
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~   75 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   75 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEee
Confidence            3578999999999999999999999 9999865421             1224566666544 356777754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.07  E-value=1.7e-10  Score=70.12  Aligned_cols=34  Identities=18%  Similarity=0.377  Sum_probs=31.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPN   39 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~   39 (86)
                      |.+|+||+|.|+|+++|++||+++|||++..+..
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~   38 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD   38 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec
Confidence            7799999999999999999999999999986653

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.6e-10  Score=68.79  Aligned_cols=57  Identities=16%  Similarity=0.168  Sum_probs=40.5

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CC--ceeEEEEecCCCcEEEEEecC
Q 037654            5 IGATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FG--EFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         5 ~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~--~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+.+++||+|+|+|+++|++||+++|||+++.+..  .+  ....+.+..+ +..+.|....
T Consensus         8 ~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~   68 (149)
T d1sqia1           8 RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG-KIVFVLCSAL   68 (149)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-TEEEEEEEES
T ss_pred             ceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC-cEEEEEEecc
Confidence            46799999999999999999999999999865421  11  1223334443 4666766543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.9e-10  Score=71.10  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=30.6

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .....+++||+|.|+|+++|++||+++|||++..+
T Consensus        18 ~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~   52 (176)
T d1qipa_          18 STKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQK   52 (176)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             CccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeee
Confidence            34466899999999999999999999999998643

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=1.2e-10  Score=68.66  Aligned_cols=30  Identities=27%  Similarity=0.551  Sum_probs=27.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      ++.|++|.|+|+++|++||+++|||++..+
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~   31 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRT   31 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEee
Confidence            688999999999999999999999998654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.02  E-value=3.3e-10  Score=69.43  Aligned_cols=37  Identities=16%  Similarity=0.301  Sum_probs=33.4

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      |...|.+|+||.|.|+|+++|++||+++|||++..+.
T Consensus        10 p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   46 (146)
T d1f1ua1          10 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED   46 (146)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC
T ss_pred             CCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeec
Confidence            4456889999999999999999999999999998764

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.02  E-value=1.7e-10  Score=72.10  Aligned_cols=35  Identities=14%  Similarity=0.014  Sum_probs=32.5

Q ss_pred             CCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            3 VNIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         3 ~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +|.+.+++||+|.|+|+++|++||+++|||+++.+
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~   41 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAK   41 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEE
Confidence            57789999999999999999999999999998754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.97  E-value=1.9e-09  Score=68.37  Aligned_cols=53  Identities=21%  Similarity=0.299  Sum_probs=37.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCC-cEEEEE
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGA-FALHLI   59 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~-~~l~L~   59 (86)
                      +.+|+||+|.|+|+++|++|| ++|||++.++.  ..+....+|+..++. ..+.+.
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~   58 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALT   58 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEE
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecc
Confidence            679999999999999999999 68999986542  222244567765432 334443

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.85  E-value=8e-09  Score=60.44  Aligned_cols=46  Identities=15%  Similarity=0.221  Sum_probs=36.8

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654           13 SRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        13 ~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .|.|+|+++|++||+++|||++..+.+    ..+++..+ +..+++.....
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~-~~~l~l~~~~~   55 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRG-DIRLHISRTEH   55 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEET-TEEEEEEECSC
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeEeeee-eeeeeeecccc
Confidence            489999999999999999999876653    45677775 57788876543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.85  E-value=1.5e-09  Score=68.36  Aligned_cols=34  Identities=12%  Similarity=0.001  Sum_probs=31.2

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      ..+.+++||+|.|+|+++|++||+++|||+++.+
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~   42 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAAR   42 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEE
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEE
Confidence            4578999999999999999999999999999754

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=98.80  E-value=5.2e-09  Score=63.07  Aligned_cols=56  Identities=14%  Similarity=0.290  Sum_probs=38.4

Q ss_pred             cceeeEEEEEe----CCHHHHHHHHHHhhCCeEeeeC-CCCceeEEEEecCCC-cEEEEEec
Q 037654            6 GATLNHISRES----SDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGA-FALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V----~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~l~~~~~-~~l~L~~~   61 (86)
                      +.++.|+.|.|    +|+++|++||+++|||++..+. ...+...+|+..++. ..+.+...
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   64 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQY   64 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccc
Confidence            45666666665    7999999999999999987543 222356677776543 44454443

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.77  E-value=2.9e-09  Score=66.24  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=28.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      ..+|+||+|.|+|++++++||+++|||++...
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~   39 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDI   39 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeE
Confidence            35899999999999999999999999998643

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=98.77  E-value=4.5e-09  Score=62.44  Aligned_cols=50  Identities=16%  Similarity=0.217  Sum_probs=36.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEe
Q 037654            8 TLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      +|+||+|.|+|+++|++||++ |||.+.......  ..+++..+++..+.+..
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~   51 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PHTEAVLDGGIRLAWDT   51 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SEEEEECGGGCEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cceeeeccceeeeeecc
Confidence            789999999999999999977 899875443222  34555555555565543

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.73  E-value=3.7e-08  Score=57.00  Aligned_cols=48  Identities=10%  Similarity=0.187  Sum_probs=36.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +-.|.|+|+++|++||+++|||++..+.+    ...++..+ +..+++.....
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~-~~~l~~~~~~~   54 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD-DVTLFISAVQD   54 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET-TEEEEEEECSC
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc-cceeecccccc
Confidence            44589999999999999999999987653    34666765 56777765543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.66  E-value=7.3e-08  Score=63.67  Aligned_cols=59  Identities=17%  Similarity=0.178  Sum_probs=40.7

Q ss_pred             CccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-------CCCceeEEEEecCC-CcEEEEEecC
Q 037654            4 NIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP-------NFGEFKVIWLNLPG-AFALHLIERN   62 (86)
Q Consensus         4 m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-------~~~~~~~~~l~~~~-~~~l~L~~~~   62 (86)
                      ..+++|+||++.|+|++++++||+++|||+...+.       .........+..++ .+.+.|.+..
T Consensus         5 ~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~   71 (224)
T d1sp8a2           5 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPV   71 (224)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEEC
T ss_pred             CCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeec
Confidence            34789999999999999999999999999875431       12223344444433 4667776643

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.53  E-value=5.6e-08  Score=55.60  Aligned_cols=32  Identities=16%  Similarity=0.267  Sum_probs=27.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN   39 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~   39 (86)
                      +++ +..|.|+|+++|++||+++|||++..+.+
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~   33 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG   33 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc
Confidence            455 68899999999999999999999986643

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.38  E-value=1e-06  Score=51.28  Aligned_cols=48  Identities=19%  Similarity=0.279  Sum_probs=34.7

Q ss_pred             eEEE--EEeCCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654           10 NHIS--RESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus        10 ~HI~--i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +|+.  |.|+|+++|++||++ |||++.....    ..+++..+ +..+++.....
T Consensus         2 ~~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~-~~~~~~~~~~~   51 (120)
T d1ecsa_           2 DQATPNLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG-DLMLEFFAHPG   51 (120)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET-TEEEEEEECTT
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc-eeccccccccc
Confidence            3555  999999999999998 9999986543    34555654 45666665443

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.33  E-value=1.1e-06  Score=56.89  Aligned_cols=32  Identities=22%  Similarity=0.492  Sum_probs=29.0

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhhCCeEeee
Q 037654            6 GATLNHISRESS--DIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         6 i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +++|+||+++|+  |+++++.||+++|||+....
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~   36 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARY   36 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEE
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEE
Confidence            578999999998  89999999999999998643

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.32  E-value=5e-07  Score=55.94  Aligned_cols=36  Identities=14%  Similarity=0.130  Sum_probs=32.1

Q ss_pred             CCCccceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC
Q 037654            2 PVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAP   38 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~   38 (86)
                      ++|-+.+|+||.++|+|++++.+||++ |||+.+.+.
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~   38 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATH   38 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecc
Confidence            367789999999999999999999987 999997654

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.3e-06  Score=55.83  Aligned_cols=35  Identities=17%  Similarity=0.332  Sum_probs=30.4

Q ss_pred             CCCccceeeEEEEEeCC--HHHHHHHHHHhhCCeEee
Q 037654            2 PVNIGATLNHISRESSD--IRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         2 ~~m~i~~i~HI~i~V~D--l~~s~~FY~~vLG~~~~~   36 (86)
                      |...+.+||||++.|++  ++++++||+++|||+...
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~   54 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFW   54 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEC
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEE
Confidence            34457899999999997  999999999999998753

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.17  E-value=9.8e-07  Score=57.25  Aligned_cols=31  Identities=16%  Similarity=0.487  Sum_probs=28.8

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhhCCeEee
Q 037654            6 GATLNHISRESS--DIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus         6 i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~   36 (86)
                      +.+||||++.|+  +++.++.||+++|||+...
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~   36 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMK   36 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECS
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEee
Confidence            579999999998  9999999999999999854

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.00  E-value=3.4e-06  Score=55.69  Aligned_cols=32  Identities=13%  Similarity=0.251  Sum_probs=29.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      +++||||++.|+|++++.+||+++||++....
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~   51 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAE   51 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEE
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEE
Confidence            67899999999999999999999999987543

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.93  E-value=2.6e-05  Score=45.96  Aligned_cols=49  Identities=22%  Similarity=0.268  Sum_probs=31.0

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeeeCC---------CCceeEEEEecCCCcEEEEEe
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEAPN---------FGEFKVIWLNLPGAFALHLIE   60 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~---------~~~~~~~~l~~~~~~~l~L~~   60 (86)
                      ++.|.|.|+++|++||+++||++++.+..         .+....+.|.+++ ..+.+..
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~-~~~~~~~   67 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG-SSFVVCD   67 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT-EEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC-eeeeccc
Confidence            56667779999999999999999864321         1123345567753 4455544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=97.36  E-value=0.00038  Score=42.72  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=45.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERNPGT   65 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~~~~   65 (86)
                      .++.||+|.|+|++++.+-.++ .|.++...+.  .++.+.+++..-+++.++|+++.+..
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~~  157 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGA  157 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTTG
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCCC
Confidence            4899999999999999998887 8998865542  22366677776567889999988753

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.33  E-value=0.00056  Score=41.42  Aligned_cols=57  Identities=12%  Similarity=0.086  Sum_probs=44.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.||+|.|.|++++.+..++ .|.+.+..|.  .++.+.+++..-|++.+.|+++...
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCC
Confidence            3899999999999999999987 6998865542  2346667766656788999998654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=97.28  E-value=0.00071  Score=40.85  Aligned_cols=71  Identities=21%  Similarity=0.303  Sum_probs=48.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-----CCCceeEEEEecCCCcEEEEEecCCCCCCCCCCCCCCCCCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP-----NFGEFKVIWLNLPGAFALHLIERNPGTKLPEGPYSTTSPTADP   81 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-----~~~~~~~~~l~~~~~~~l~L~~~~~~~~~~~~~~~~~~~~~~~   81 (86)
                      .++.||++.|.|++++.+--++ -|.+.+..+     ..+....++++..++..+.|+++.+..    ++|=.|.....|
T Consensus        83 ~G~~hiaf~VdDid~a~~~l~~-~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~----g~flp~~~~~~~  157 (163)
T d1t47a1          83 DGVVDLAIEVPDARAAHAYAIE-HGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYD----GPYLPGYVAAAP  157 (163)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEEC----SSSSTTCEECCC
T ss_pred             CceEEEEEeeCCHHHHHHHHHH-CCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCC----CccCCCCCcCCC
Confidence            4899999999999999998876 788765443     233355667776567889999876543    344444444444


Q ss_pred             C
Q 037654           82 S   82 (86)
Q Consensus        82 ~   82 (86)
                      .
T Consensus       158 ~  158 (163)
T d1t47a1         158 I  158 (163)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=97.13  E-value=0.0025  Score=37.11  Aligned_cols=57  Identities=12%  Similarity=0.159  Sum_probs=37.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCCCCceeEEEEecCCCcEEEEEecCCC
Q 037654            8 TLNHISRESSDIRRLADFYKEI--FGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      +++|+++.|.|.+...+|.+.+  .|..+...........+|+.=.++..|+|++....
T Consensus        77 ~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          77 AITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTTC
T ss_pred             ceeEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCCC
Confidence            5899999999977766666654  45554221111224556676666889999986653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=97.08  E-value=0.0012  Score=38.47  Aligned_cols=54  Identities=11%  Similarity=0.130  Sum_probs=41.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCC--CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPN--FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|+++..+..++ .|.+....+.  .+....+|++-.++..|+|+++
T Consensus        92 ~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          92 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             cceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            4789999999999999999887 7988754331  2235566777666788999874

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.0017  Score=38.43  Aligned_cols=57  Identities=23%  Similarity=0.296  Sum_probs=42.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-----CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP-----NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-----~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.||++.|.|++++.+-.++ .|.+.+..+     ..+....++++.-+++.+.|+++.+.
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~-~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARE-RGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHH-HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             CeEEEEEEEeccHHHHHHHHHH-CCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            4789999999999999988876 788875433     22334455666556789999997664

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=96.82  E-value=0.0019  Score=37.26  Aligned_cols=56  Identities=16%  Similarity=0.248  Sum_probs=39.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEe--cCCCcEEEEEecC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLN--LPGAFALHLIERN   62 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~--~~~~~~l~L~~~~   62 (86)
                      ..+++||++.|.|++++.+-.++ .|.+.+..+   ..++...+|+.  -.++..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            45799999999999999998887 598875332   22334556663  2346889998853

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=96.44  E-value=0.0043  Score=37.50  Aligned_cols=57  Identities=18%  Similarity=0.126  Sum_probs=40.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC-CCCceeEEEEecCCCcEEEEEecCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP-NFGEFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      .++.||++.|+|++++.+.-.. +|.+.+..+ ..+......++.-++..+.++++.+.
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCCC
Confidence            4899999999999999998886 899987554 22333344444334678888876543

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.41  E-value=0.033  Score=32.56  Aligned_cols=50  Identities=18%  Similarity=0.223  Sum_probs=32.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhhCCeEeee---------CCCCceeEEEEecCCCcEEEEEec
Q 037654           11 HISRESSDIRRLADFYKEIFGFEEIEA---------PNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        11 HI~i~V~Dl~~s~~FY~~vLG~~~~~~---------~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ++.+.-.|.+++++||+++||.+++.+         ...+..-.+-|.++ +..|.+...
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~-~~~i~~~d~   67 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-DQSVHCIDS   67 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-TEEEEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC-CEEEEEecC
Confidence            445555689999999999999876422         11223445677886 455666543

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.30  E-value=0.0021  Score=37.65  Aligned_cols=23  Identities=13%  Similarity=0.021  Sum_probs=19.5

Q ss_pred             EEeC-CHHHHHHHHHHhhCCeEee
Q 037654           14 RESS-DIRRLADFYKEIFGFEEIE   36 (86)
Q Consensus        14 i~V~-Dl~~s~~FY~~vLG~~~~~   36 (86)
                      |... |.+++++||+++||+++..
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~   31 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEA   31 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEE
Confidence            4445 9999999999999999854

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=96.09  E-value=0.016  Score=35.07  Aligned_cols=56  Identities=14%  Similarity=0.275  Sum_probs=38.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCCCCceeEEEEecCCCcEEEEEecCC
Q 037654            8 TLNHISRESSDIRRLADFYKEIF--GFEEIEAPNFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      +++||++.|.|.+...+++..+-  |.++....+.+....+||+-.++..|+|.....
T Consensus        75 ~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          75 SIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEEE
T ss_pred             ccceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEECCC
Confidence            68999999999888888888774  555432111222455677766788999987543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.025  Score=33.70  Aligned_cols=58  Identities=16%  Similarity=0.326  Sum_probs=43.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeCCCC-ceeEEEEecCCCcEEEEEecCCC
Q 037654            6 GATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFG-EFKVIWLNLPGAFALHLIERNPG   64 (86)
Q Consensus         6 i~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~l~~~~~~~l~L~~~~~~   64 (86)
                      ..++.|+++.|.|+++..+..++ .|.+....+..+ ....+|++=.++..|||++....
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTTG
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCCC
Confidence            35899999999999999999987 699987654321 13346666556789999987654

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=95.38  E-value=0.067  Score=31.05  Aligned_cols=47  Identities=15%  Similarity=0.116  Sum_probs=30.2

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCeEeee---C------CCCceeEEEEecCCCcEEEEE
Q 037654           12 ISRESS-DIRRLADFYKEIFGFEEIEA---P------NFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus        12 I~i~V~-Dl~~s~~FY~~vLG~~~~~~---~------~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      --|.+. |.+++++||+++||-+.+.+   .      ..+..-.+-|.++ +..|.+.
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~-g~~~~~~   64 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-GQVFMAI   64 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-TEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC-CEEEEee
Confidence            456666 99999999999997654321   0      1233455677886 4555544

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=94.89  E-value=0.066  Score=30.59  Aligned_cols=57  Identities=12%  Similarity=0.195  Sum_probs=40.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeCC-CCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAPN-FGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~~-~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+.+|+++.|.|.+...++|..+.  |.+++..+. ..+...+|+.=.++..|+|+....
T Consensus        74 ~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          74 HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             CTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             ccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence            457899999999999999988865  677654332 112345667666678999986544

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=93.90  E-value=0.22  Score=27.18  Aligned_cols=58  Identities=14%  Similarity=0.241  Sum_probs=39.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEecCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNPGT   65 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~~~   65 (86)
                      .+..|+++.+.++++..+-.+. .|......+   ..+....+|+.-.++..|+|++..+..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~  130 (135)
T d1f9za_          70 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             ccceeeccchHHHHHHHHHHHH-cCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcc
Confidence            4688999999999999887654 677664432   233356677776678999999876643

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=93.52  E-value=0.31  Score=27.54  Aligned_cols=67  Identities=18%  Similarity=0.191  Sum_probs=41.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC-----CCceeEEEEecCCCcEEEEEecCCCCCCCCCCCCCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN-----FGEFKVIWLNLPGAFALHLIERNPGTKLPEGPYSTT   75 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~-----~~~~~~~~l~~~~~~~l~L~~~~~~~~~~~~~~~~~   75 (86)
                      .++.|+++.|.|.+...++++.+  .|.++...+.     .+....+||.-.++..|+++....  .....||..|
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~~--~~~~~pf~pg  130 (131)
T d1lgta1          57 DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS--EVFEKPFLPG  130 (131)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC--BCTTSCCCCS
T ss_pred             CCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCCC--ccCCCCCCCC
Confidence            47899999998766655555554  4766654321     122356677656678899985432  2344566655

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=92.73  E-value=0.12  Score=28.01  Aligned_cols=52  Identities=12%  Similarity=0.249  Sum_probs=33.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCCCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPNFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      .+.+|+++.|.|.+...+++..+  .|.++...+... ....|+.-.++..|+|.
T Consensus        59 ~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          59 PKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC--CEEEEEEETTTEEEEEE
T ss_pred             cccceeeeeeccccchhhhhhhHHHcCCccccCCCCc-eEEEEEECCCCCEEEEE
Confidence            46789999999988888888776  577654322222 23445554556777764

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=92.20  E-value=0.071  Score=33.48  Aligned_cols=30  Identities=20%  Similarity=0.326  Sum_probs=25.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .++.||++.|+|+.++++..++ -|++....
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~~  112 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMTA  112 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCccccC
Confidence            4799999999999999998887 58776543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=91.43  E-value=0.081  Score=33.78  Aligned_cols=22  Identities=18%  Similarity=0.255  Sum_probs=19.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHH
Q 037654            7 ATLNHISRESSDIRRLADFYKE   28 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~   28 (86)
                      .+++|||+.|+|+.++++..++
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~a  111 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQA  111 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHT
T ss_pred             CCceeEEEEeCCHHHHHHHHHh
Confidence            4899999999999999887765

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.60  E-value=0.71  Score=25.23  Aligned_cols=50  Identities=18%  Similarity=0.339  Sum_probs=35.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654           10 NHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus        10 ~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .|+++.|.|++++.+-..+ .|.++...+   ..+ ...+++.-.++..|++++.
T Consensus        62 ~~~~f~v~D~d~~~~~l~~-~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          62 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             eEEEEEECCHHHHHHHHHh-hccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            4799999999999888877 688875432   233 3455666555778888764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=90.59  E-value=0.58  Score=26.24  Aligned_cols=54  Identities=13%  Similarity=0.098  Sum_probs=36.3

Q ss_pred             cceeeEEEEEe--CCHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRES--SDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V--~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      -.+..|++|.+  .|+++..+..++ .|.++...+... ...+|+.-.++..|+|...
T Consensus        62 ~~~~~h~~~~~~~~d~~~~~~~l~~-~Gv~~~~~~~~~-~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          62 ESDYTHYAFTVAEEDFEPLSQRLEQ-AGVTIWKQNKSE-GASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             GSCSCEEEEECCHHHHHHHHHHHHH-TTCCEEECCCSS-SEEEEEECTTCCEEEEEEC
T ss_pred             CCccceeeeechHHHHHHHHHHHHH-CCCeEeecCCCC-ceEEEEECCCCCEEEEEEC
Confidence            34678999998  467777777666 698876655433 3455666556778888653

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.45  E-value=0.13  Score=32.93  Aligned_cols=22  Identities=32%  Similarity=0.324  Sum_probs=19.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHH
Q 037654            7 ATLNHISRESSDIRRLADFYKE   28 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~   28 (86)
                      .+++||++.|+|+.++++-.++
T Consensus       103 ~GiQHIAf~tdDI~aav~~Lra  124 (230)
T d1sqda2         103 AGLQHLALMSEDIFRTLREMRK  124 (230)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH
T ss_pred             CceeEEEEEeCCHHHHHHHHHH
Confidence            3899999999999999887776

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=90.24  E-value=0.97  Score=26.23  Aligned_cols=57  Identities=16%  Similarity=0.047  Sum_probs=40.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhh--CCeEeeeC---CCCceeEEEEecCCCcEEEEEecCC
Q 037654            7 ATLNHISRESSDIRRLADFYKEIF--GFEEIEAP---NFGEFKVIWLNLPGAFALHLIERNP   63 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vL--G~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~~~   63 (86)
                      .+++|+++.+.|.+...+++..+-  |.+....+   ..+....+|+.-.++..|+|+...+
T Consensus        65 ~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          65 GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             CccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            479999999999998888876653  66553322   2233456777767788999997654

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.91  E-value=0.73  Score=24.34  Aligned_cols=51  Identities=14%  Similarity=0.242  Sum_probs=34.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeeeC---CCCceeEEEEecCCCcEEEEE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAP---NFGEFKVIWLNLPGAFALHLI   59 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~   59 (86)
                      ....|+.+.|.|+++..+-.++ .|.++...+   ..+ ....++.-.++..|+++
T Consensus        58 ~~~~~~~~~~~dvd~~~~~l~~-~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          58 TDVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             BCCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             CceeEEEEEecCHHHHHHHHHh-hccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            3567899999999987777765 588765432   233 45556665556777764

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=89.86  E-value=0.17  Score=31.76  Aligned_cols=30  Identities=20%  Similarity=0.331  Sum_probs=24.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .|+.|||+.|+|+.++++-.++ -|++...-
T Consensus        88 ~GiQHIAl~tdDI~~av~~L~~-~G~~fL~~  117 (199)
T d1t47a2          88 AGVQHIALNTGDIVETVRTMRA-AGVQFLDT  117 (199)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-TTCCBCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHH-cCCCCCCC
Confidence            4899999999999999998876 67766443

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.18  Score=31.84  Aligned_cols=27  Identities=30%  Similarity=0.364  Sum_probs=21.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeE
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEE   34 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~   34 (86)
                      .++.||++.|+|+.++++-.++ -|++.
T Consensus       106 ~GiQHIAf~t~DI~~av~~L~~-~Gv~f  132 (210)
T d1sqia2         106 AGVQHIALRTEDIITTIRHLRE-RGMEF  132 (210)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-HTCCB
T ss_pred             CCeeEEEEEcCCHHHHHHHHHH-cCCCC
Confidence            3799999999999999987765 35544

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=88.99  E-value=1  Score=24.71  Aligned_cols=53  Identities=21%  Similarity=0.262  Sum_probs=37.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeC---CCCceeEEEEecCCCcEEEEEec
Q 037654            8 TLNHISRESSDIRRLADFYKEI--FGFEEIEAP---NFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         8 ~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~---~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      +..|+++.|.|.+...+.|.++  .|.++...+   ..+ ....|+.-.++..|+|++.
T Consensus        69 ~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          69 HRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             CSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEE
T ss_pred             cceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEec
Confidence            5679999999988888888876  477765432   222 4556666566788998864

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.07  E-value=1.6  Score=24.69  Aligned_cols=55  Identities=9%  Similarity=0.041  Sum_probs=36.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHh--hCCeEeeeCC---CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSDIRRLADFYKEI--FGFEEIEAPN---FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~v--LG~~~~~~~~---~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.+.+.+...+++..+  .|.++...+.   .+....+|+.-.++..|+++..
T Consensus        71 ~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          71 AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            57899999998655555555544  5877654331   2223556777667889999864

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.32  E-value=1.4  Score=24.27  Aligned_cols=54  Identities=17%  Similarity=0.154  Sum_probs=34.3

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeCCCCceeEEEEecCCCcEEEEEec
Q 037654            6 GATLNHISRESS--DIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         6 i~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      ..+.+|+++.+.  |+++..+..++ .|.++...+... ...+|+.-.++..|+|...
T Consensus        59 ~~~~~h~~~~~~~~dl~~~~~~l~~-~G~~~~~~~~~~-~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          59 AADYTHYAFGIAAADFARFAAQLRA-HGVREWKQNRSE-GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             CSSSCEEEEEECHHHHHHHHHHHHH-TTCCEEECCCSS-SCEEEEECTTCCEEEEESC
T ss_pred             ccccccchhccccchHHHHHHHHHH-CCCcCccCCCcc-eeEEEEECCCCCEEEEEEC
Confidence            346788888874  66666665555 588875543322 3556666556788998754

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.15  E-value=1.7  Score=24.66  Aligned_cols=29  Identities=14%  Similarity=0.218  Sum_probs=22.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhhCCeEeee
Q 037654            7 ATLNHISRESSDIRRLADFYKEIFGFEEIEA   37 (86)
Q Consensus         7 ~~i~HI~i~V~Dl~~s~~FY~~vLG~~~~~~   37 (86)
                      .++.++.+.+.|.. +.+||++ +||+.+.+
T Consensus        92 ~g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~  120 (137)
T d2g3aa1          92 RGCMGAYIDTMNPD-ALRTYER-YGFTKIGS  120 (137)
T ss_dssp             TTCCEEEEEESCHH-HHHHHHH-HTCEEEEE
T ss_pred             cCCceEEEecccHh-hHHHHHh-CCCEEEEE
Confidence            36678888888754 7999998 79998743

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=83.63  E-value=2.1  Score=23.21  Aligned_cols=55  Identities=20%  Similarity=0.235  Sum_probs=35.7

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhhCCeEeeeC--CCCceeEEEEecCCCcEEEEEecC
Q 037654            7 ATLNHISRESS--DIRRLADFYKEIFGFEEIEAP--NFGEFKVIWLNLPGAFALHLIERN   62 (86)
Q Consensus         7 ~~i~HI~i~V~--Dl~~s~~FY~~vLG~~~~~~~--~~~~~~~~~l~~~~~~~l~L~~~~   62 (86)
                      .+.+|+++.|+  |++++.+..++ -|.++...+  .......+|+.-.++..|+|....
T Consensus        65 ~~~~~~~f~v~~~dv~~~~~~l~~-~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cceeeeeecccHHHHHHHHHHHHH-CCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            46889999885  68888887777 588865332  112234455665567889987543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.91  E-value=2.8  Score=23.27  Aligned_cols=54  Identities=19%  Similarity=0.205  Sum_probs=34.3

Q ss_pred             ceeeEEEEEeCC---HHHHHHHHHHhhCCeEeeeCC-----CCceeEEEEecCCCcEEEEEec
Q 037654            7 ATLNHISRESSD---IRRLADFYKEIFGFEEIEAPN-----FGEFKVIWLNLPGAFALHLIER   61 (86)
Q Consensus         7 ~~i~HI~i~V~D---l~~s~~FY~~vLG~~~~~~~~-----~~~~~~~~l~~~~~~~l~L~~~   61 (86)
                      .+++|+++.|.|   +++..+..++ .|.++...+.     .+....+|+.=.++..|+++..
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          57 DDLAYAGLEVDDAAALERMADKLRQ-AGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHH-HTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             CCceEEEEEeccHHHHHHHHHHHHH-cCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            478999999976   4555555554 5777654331     0112456676566788999854