Citrus Sinensis ID: 037707


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSSCL
cEEHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHccccccEEEEEccccEEEEEccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEEEEccccccHHHHcccc
cHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccHcccccccccccccEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHccccccEcccccccccccEEEEEEEEcccccHHHHHHcc
MNVILVFVTALSVQIsltkaddkptyiyhncpstnftpnsaYQSNLNLLLSTLrsnatrgssdkfskgfyntttghepnkvyglflcrgdfgpetcqncvsvatsdtaqlcpfgkentigyeecllrysnisffSVLDTSFKLsqsnvekfpsrsfdQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVqctpdlsrddcsscl
MNVILVFVTALSVQIsltkaddkptyIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSlvqctpdlsrddcsscl
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQsnlnlllstlrsnATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSSCL
**VILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTL*************KGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCT************
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNAT**SSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSSCL
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDL*********
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDC*SCL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNVILVFVTALSVQISLTKADDKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFKLSQSNVEKFPSRSFDQFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSSCL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query210 2.2.26 [Sep-21-2011]
Q8GYA4 669 Cysteine-rich receptor-li yes no 0.866 0.272 0.471 6e-40
O65468 676 Cysteine-rich receptor-li no no 0.866 0.269 0.435 3e-37
O65482 830 Putative cysteine-rich re no no 0.866 0.219 0.434 1e-35
Q8W4G6 627 Cysteine-rich receptor-li no no 0.852 0.285 0.429 4e-35
Q9M0X5 675 Cysteine-rich receptor-li no no 0.857 0.266 0.446 1e-33
O65469265 Putative cysteine-rich re no no 0.866 0.686 0.417 8e-33
O65479 666 Putative cysteine-rich re no no 0.904 0.285 0.396 1e-32
Q9C5S9 674 Cysteine-rich receptor-li no no 0.861 0.268 0.430 4e-31
Q9C5S8 659 Cysteine-rich receptor-li no no 0.847 0.270 0.402 2e-30
Q8L7G3 659 Cysteine-rich receptor-li no no 0.866 0.276 0.402 2e-29
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function desciption
 Score =  163 bits (413), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/191 (47%), Positives = 117/191 (61%), Gaps = 9/191 (4%)

Query: 24  PTYIYHNCPST-NFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVY 82
           PTY+YH C +T N+T NS Y +NL  LL++L S   R +S  +S GF N T G  P++V 
Sbjct: 37  PTYVYHTCQNTANYTSNSTYNNNLKTLLASLSS---RNAS--YSTGFQNATVGQAPDRVT 91

Query: 83  GLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFK 142
           GLF CRGD   E C+ CVS A +DT   CP  KE T+ Y+EC+LRYSN +  S L T+  
Sbjct: 92  GLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTGG 151

Query: 143 LSQSNVEKFPSRSFD---QFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTP 199
           +   N     S   D     V  ++N+A   AL+++K F T K N+TA Q+ Y LVQCTP
Sbjct: 152 VILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQCTP 211

Query: 200 DLSRDDCSSCL 210
           DL+R DCS CL
Sbjct: 212 DLTRQDCSRCL 222





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2 Back     alignment and function description
>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1 Back     alignment and function description
>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2 Back     alignment and function description
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|O65469|CRK9_ARATH Putative cysteine-rich receptor-like protein kinase 9 OS=Arabidopsis thaliana GN=CRK9 PE=5 SV=1 Back     alignment and function description
>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1 Back     alignment and function description
>sp|Q8L7G3|CRK7_ARATH Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query210
30686087 669 cysteine-rich receptor-like protein kina 0.866 0.272 0.471 3e-38
13506745 658 receptor-like protein kinase 4 [Arabidop 0.866 0.276 0.471 3e-38
24417476 658 unknown [Arabidopsis thaliana] 0.866 0.276 0.471 4e-38
3021270 633 serine/threonine kinase-like protein [Ar 0.866 0.287 0.471 4e-38
359474717 663 PREDICTED: cysteine-rich receptor-like p 0.876 0.277 0.464 5e-38
224100081 468 predicted protein [Populus trichocarpa] 0.904 0.405 0.45 9e-37
224113935 674 predicted protein [Populus trichocarpa] 0.895 0.278 0.497 6e-36
152013452 676 RecName: Full=Cysteine-rich receptor-lik 0.866 0.269 0.435 1e-35
42567050 1262 cysteine-rich receptor-like protein kina 0.866 0.144 0.435 2e-35
3021268 1240 putative protein [Arabidopsis thaliana] 0.866 0.146 0.435 2e-35
>gi|30686087|ref|NP_567679.2| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] gi|334302916|sp|Q8GYA4.3|CRK10_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 10; Short=Cysteine-rich RLK10; AltName: Full=Receptor-like protein kinase 4; Flags: Precursor gi|26450601|dbj|BAC42412.1| putative receptor-like protein kinase 4 RLK4 [Arabidopsis thaliana] gi|29029020|gb|AAO64889.1| At4g23180 [Arabidopsis thaliana] gi|332659319|gb|AEE84719.1| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/191 (47%), Positives = 117/191 (61%), Gaps = 9/191 (4%)

Query: 24  PTYIYHNCPST-NFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVY 82
           PTY+YH C +T N+T NS Y +NL  LL++L S   R +S  +S GF N T G  P++V 
Sbjct: 37  PTYVYHTCQNTANYTSNSTYNNNLKTLLASLSS---RNAS--YSTGFQNATVGQAPDRVT 91

Query: 83  GLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFK 142
           GLF CRGD   E C+ CVS A +DT   CP  KE T+ Y+EC+LRYSN +  S L T+  
Sbjct: 92  GLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTGG 151

Query: 143 LSQSNVEKFPSRSFD---QFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTP 199
           +   N     S   D     V  ++N+A   AL+++K F T K N+TA Q+ Y LVQCTP
Sbjct: 152 VILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQCTP 211

Query: 200 DLSRDDCSSCL 210
           DL+R DCS CL
Sbjct: 212 DLTRQDCSRCL 222




Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13506745|gb|AAK28315.1|AF224705_1 receptor-like protein kinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|24417476|gb|AAN60348.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3021270|emb|CAA18465.1| serine/threonine kinase-like protein [Arabidopsis thaliana] gi|7269165|emb|CAB79273.1| serine/threonine kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224100081|ref|XP_002334411.1| predicted protein [Populus trichocarpa] gi|222872074|gb|EEF09205.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|152013452|sp|O65468.2|CRK8_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 8; Short=Cysteine-rich RLK8; Flags: Precursor Back     alignment and taxonomy information
>gi|42567050|ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3021268|emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query210
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.947 0.297 0.418 3.2e-37
TAIR|locus:2121651 676 CRK8 "cysteine-rich RLK (RECEP 0.966 0.300 0.383 7.2e-36
TAIR|locus:2121666265 EP1 "AT4G23170" [Arabidopsis t 0.966 0.766 0.376 1.5e-33
TAIR|locus:2121626 830 CRK23 "cysteine-rich RLK (RECE 0.895 0.226 0.393 3.3e-32
TAIR|locus:2121636 659 CRK7 "cysteine-rich RLK (RECEP 0.952 0.303 0.358 2.5e-30
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.861 0.268 0.407 2.7e-30
TAIR|locus:2121686 645 CRK19 "cysteine-rich RLK (RECE 0.976 0.317 0.355 1.3e-29
TAIR|locus:2077147 676 CRK4 "cysteine-rich RLK (RECEP 0.847 0.263 0.367 1.1e-27
TAIR|locus:2195778 341 AT1G61750 "AT1G61750" [Arabido 0.861 0.530 0.365 1.2e-24
TAIR|locus:2031341 324 AT1G63550 [Arabidopsis thalian 0.857 0.555 0.336 1e-22
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 405 (147.6 bits), Expect = 3.2e-37, P = 3.2e-37
 Identities = 87/208 (41%), Positives = 115/208 (55%)

Query:     7 FVTALSVQISLTKADDKPTYIYHNCPST-NFTPNSAYQXXXXXXXXXXXXXATRGSSDKF 65
             F+   S   S   +   PTY+YH C +T N+T NS Y              ++R +S  +
Sbjct:    20 FLFLFSFLTSFRVSAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL---SSRNAS--Y 74

Query:    66 SKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECL 125
             S GF N T G  P++V GLF CRGD   E C+ CVS A +DT   CP  KE T+ Y+EC+
Sbjct:    75 STGFQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECV 134

Query:   126 LRYSNISFFSVLDTSFKLSQSNVEKFPSRSFD---QFVWNSINEAVNQALSTTKMFATVK 182
             LRYSN +  S L T+  +   N     S   D     V  ++N+A   AL+++K F T K
Sbjct:   135 LRYSNQNILSTLITTGGVILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRK 194

Query:   183 KNYTASQTLYSLVQCTPDLSRDDCSSCL 210
              N+TA Q+ Y LVQCTPDL+R DCS CL
Sbjct:   195 NNFTALQSFYGLVQCTPDLTRQDCSRCL 222




GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0004713 "protein tyrosine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0006995 "cellular response to nitrogen starvation" evidence=RCA
TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
CRK10
CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase; Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) (669 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
KAPP
KAPP (KINASE ASSOCIATED PROTEIN PHOSPHATASE); phosphoprotein phosphatase/ protein kinase bindin [...] (591 aa)
      0.895
RPP13L4
disease resistance protein (CC-NBS-LRR class), putative; disease resistance protein (CC-NBS-LRR [...] (852 aa)
       0.772
AT2G24600
ankyrin repeat family protein; ankyrin repeat family protein; FUNCTIONS IN- protein binding; IN [...] (601 aa)
       0.772
AT2G31880
leucine-rich repeat transmembrane protein kinase, putative; Encodes a putative leucine rich rep [...] (641 aa)
      0.740
AT1G55450
embryo-abundant protein-related; embryo-abundant protein-related; FUNCTIONS IN- methyltransfera [...] (311 aa)
       0.728
WRKY33
WRKY33; transcription factor; Member of the plant WRKY transcription factor family. Regulates t [...] (519 aa)
      0.680
WRKY53
WRKY53; DNA binding / protein binding / transcription activator/ transcription factor; member o [...] (324 aa)
      0.672
EDA39
EDA39 (embryo sac development arrest 39); calmodulin binding; embryo sac development arrest 39 [...] (526 aa)
       0.649
DL3220C
zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein; zinc finge [...] (376 aa)
       0.649
AT2G26190
calmodulin-binding family protein; calmodulin-binding family protein; FUNCTIONS IN- calmodulin [...] (532 aa)
       0.637

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query210
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 4e-27
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 5e-06
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 99.4 bits (248), Expect = 4e-27
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 28  YHNCPSTN----FTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYG 83
           +H C S       T NS ++SNLN LLS+L SNA    +    KGF   T+G  P+ VYG
Sbjct: 1   FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNA----ASSSGKGFAAGTSGAAPDTVYG 56

Query: 84  LFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISF 133
           L  CRGD     C++C++ A S+  + CP  K   I Y+ C LRY +  F
Sbjct: 57  LAQCRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 210
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.95
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.3
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.95  E-value=1e-27  Score=178.69  Aligned_cols=102  Identities=43%  Similarity=0.864  Sum_probs=77.9

Q ss_pred             ccCCC-C--Ccc-CCCchHHHHHHHHHHHHHHhhccCCCCCcccCeeeeecCCCCCeeEEEEEecCCCChhchHHHHHHH
Q 037707           28 YHNCP-S--TNF-TPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVA  103 (210)
Q Consensus        28 ~~~C~-~--~~~-~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a  103 (210)
                      |+.|+ +  +++ +++++|+++|+.||..|+.+++...+    ++|+++..|.++++||||+||++|+++++|+.||+.+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~----~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a   76 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSS----KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA   76 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccc----cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence            78899 3  566 57888999999999999999876521    3899998888889999999999999999999999999


Q ss_pred             HHHhhhhCCCCceeEEEccceEEEEccccc
Q 037707          104 TSDTAQLCPFGKENTIGYEECLLRYSNISF  133 (210)
Q Consensus       104 ~~~~~~~C~~~~~a~i~~~~C~lRYs~~~f  133 (210)
                      +..++..|+.+++|+||+++|+||||+++|
T Consensus        77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   77 VANISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            999999999999999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query210
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 5e-28
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 1e-08

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query210
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.97
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.97
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.48
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.44
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.97  E-value=4.1e-31  Score=196.82  Aligned_cols=107  Identities=19%  Similarity=0.479  Sum_probs=98.0

Q ss_pred             CCCcccccCCCCCccCCCchHHHHHHHHHHHHHHhhccCCCCCcccCeeeeecCC-CCCeeEEEEEecCCCChhchHHHH
Q 037707           22 DKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGH-EPNKVYGLFLCRGDFGPETCQNCV  100 (210)
Q Consensus        22 ~~~~~~~~~C~~~~~~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~-~~~~vYgl~qC~~Dls~~~C~~Cl  100 (210)
                      +++.++++.|++++|+++++|++||+.||+.|+++++.++.     +|+++..|. ++++||||+|||||+++++|+.||
T Consensus         1 A~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~-----~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl   75 (108)
T 3a2e_A            1 ANTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGY-----DYKTSRAGSGGAPTAYGRATCKQSISQSDCTACL   75 (108)
T ss_dssp             CCCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTS-----EEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHH
T ss_pred             CCcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccC-----CceEeeccCCCCceEEEEEEEcCCCCHHHHHHHH
Confidence            36788999999899999999999999999999999887653     677776654 568999999999999999999999


Q ss_pred             HHHHHHhhhhCCCCceeEEEccceEEEEccccc
Q 037707          101 SVATSDTAQLCPFGKENTIGYEECLLRYSNISF  133 (210)
Q Consensus       101 ~~a~~~~~~~C~~~~~a~i~~~~C~lRYs~~~f  133 (210)
                      +.|+.++++.||++++|+||+++|+||||+++|
T Consensus        76 ~~a~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           76 SNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHHTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            999999999999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00