Citrus Sinensis ID: 037707
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 210 | ||||||
| 30686087 | 669 | cysteine-rich receptor-like protein kina | 0.866 | 0.272 | 0.471 | 3e-38 | |
| 13506745 | 658 | receptor-like protein kinase 4 [Arabidop | 0.866 | 0.276 | 0.471 | 3e-38 | |
| 24417476 | 658 | unknown [Arabidopsis thaliana] | 0.866 | 0.276 | 0.471 | 4e-38 | |
| 3021270 | 633 | serine/threonine kinase-like protein [Ar | 0.866 | 0.287 | 0.471 | 4e-38 | |
| 359474717 | 663 | PREDICTED: cysteine-rich receptor-like p | 0.876 | 0.277 | 0.464 | 5e-38 | |
| 224100081 | 468 | predicted protein [Populus trichocarpa] | 0.904 | 0.405 | 0.45 | 9e-37 | |
| 224113935 | 674 | predicted protein [Populus trichocarpa] | 0.895 | 0.278 | 0.497 | 6e-36 | |
| 152013452 | 676 | RecName: Full=Cysteine-rich receptor-lik | 0.866 | 0.269 | 0.435 | 1e-35 | |
| 42567050 | 1262 | cysteine-rich receptor-like protein kina | 0.866 | 0.144 | 0.435 | 2e-35 | |
| 3021268 | 1240 | putative protein [Arabidopsis thaliana] | 0.866 | 0.146 | 0.435 | 2e-35 |
| >gi|30686087|ref|NP_567679.2| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] gi|334302916|sp|Q8GYA4.3|CRK10_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 10; Short=Cysteine-rich RLK10; AltName: Full=Receptor-like protein kinase 4; Flags: Precursor gi|26450601|dbj|BAC42412.1| putative receptor-like protein kinase 4 RLK4 [Arabidopsis thaliana] gi|29029020|gb|AAO64889.1| At4g23180 [Arabidopsis thaliana] gi|332659319|gb|AEE84719.1| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 117/191 (61%), Gaps = 9/191 (4%)
Query: 24 PTYIYHNCPST-NFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVY 82
PTY+YH C +T N+T NS Y +NL LL++L S R +S +S GF N T G P++V
Sbjct: 37 PTYVYHTCQNTANYTSNSTYNNNLKTLLASLSS---RNAS--YSTGFQNATVGQAPDRVT 91
Query: 83 GLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSFK 142
GLF CRGD E C+ CVS A +DT CP KE T+ Y+EC+LRYSN + S L T+
Sbjct: 92 GLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTGG 151
Query: 143 LSQSNVEKFPSRSFD---QFVWNSINEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTP 199
+ N S D V ++N+A AL+++K F T K N+TA Q+ Y LVQCTP
Sbjct: 152 VILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQCTP 211
Query: 200 DLSRDDCSSCL 210
DL+R DCS CL
Sbjct: 212 DLTRQDCSRCL 222
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|13506745|gb|AAK28315.1|AF224705_1 receptor-like protein kinase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|24417476|gb|AAN60348.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3021270|emb|CAA18465.1| serine/threonine kinase-like protein [Arabidopsis thaliana] gi|7269165|emb|CAB79273.1| serine/threonine kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224100081|ref|XP_002334411.1| predicted protein [Populus trichocarpa] gi|222872074|gb|EEF09205.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|152013452|sp|O65468.2|CRK8_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 8; Short=Cysteine-rich RLK8; Flags: Precursor | Back alignment and taxonomy information |
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| >gi|42567050|ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3021268|emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 210 | ||||||
| TAIR|locus:2121676 | 669 | CRK10 "cysteine-rich RLK (RECE | 0.947 | 0.297 | 0.418 | 3.2e-37 | |
| TAIR|locus:2121651 | 676 | CRK8 "cysteine-rich RLK (RECEP | 0.966 | 0.300 | 0.383 | 7.2e-36 | |
| TAIR|locus:2121666 | 265 | EP1 "AT4G23170" [Arabidopsis t | 0.966 | 0.766 | 0.376 | 1.5e-33 | |
| TAIR|locus:2121626 | 830 | CRK23 "cysteine-rich RLK (RECE | 0.895 | 0.226 | 0.393 | 3.3e-32 | |
| TAIR|locus:2121636 | 659 | CRK7 "cysteine-rich RLK (RECEP | 0.952 | 0.303 | 0.358 | 2.5e-30 | |
| TAIR|locus:2115728 | 675 | CRK25 "cysteine-rich RLK (RECE | 0.861 | 0.268 | 0.407 | 2.7e-30 | |
| TAIR|locus:2121686 | 645 | CRK19 "cysteine-rich RLK (RECE | 0.976 | 0.317 | 0.355 | 1.3e-29 | |
| TAIR|locus:2077147 | 676 | CRK4 "cysteine-rich RLK (RECEP | 0.847 | 0.263 | 0.367 | 1.1e-27 | |
| TAIR|locus:2195778 | 341 | AT1G61750 "AT1G61750" [Arabido | 0.861 | 0.530 | 0.365 | 1.2e-24 | |
| TAIR|locus:2031341 | 324 | AT1G63550 [Arabidopsis thalian | 0.857 | 0.555 | 0.336 | 1e-22 |
| TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 405 (147.6 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 87/208 (41%), Positives = 115/208 (55%)
Query: 7 FVTALSVQISLTKADDKPTYIYHNCPST-NFTPNSAYQXXXXXXXXXXXXXATRGSSDKF 65
F+ S S + PTY+YH C +T N+T NS Y ++R +S +
Sbjct: 20 FLFLFSFLTSFRVSAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL---SSRNAS--Y 74
Query: 66 SKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECL 125
S GF N T G P++V GLF CRGD E C+ CVS A +DT CP KE T+ Y+EC+
Sbjct: 75 STGFQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECV 134
Query: 126 LRYSNISFFSVLDTSFKLSQSNVEKFPSRSFD---QFVWNSINEAVNQALSTTKMFATVK 182
LRYSN + S L T+ + N S D V ++N+A AL+++K F T K
Sbjct: 135 LRYSNQNILSTLITTGGVILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRK 194
Query: 183 KNYTASQTLYSLVQCTPDLSRDDCSSCL 210
N+TA Q+ Y LVQCTPDL+R DCS CL
Sbjct: 195 NNFTALQSFYGLVQCTPDLTRQDCSRCL 222
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| TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| CRK10 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase; Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) (669 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
| KAPP | • | • | 0.895 | ||||||||
| RPP13L4 | • | 0.772 | |||||||||
| AT2G24600 | • | 0.772 | |||||||||
| AT2G31880 | • | • | 0.740 | ||||||||
| AT1G55450 | • | 0.728 | |||||||||
| WRKY33 | • | • | 0.680 | ||||||||
| WRKY53 | • | • | 0.672 | ||||||||
| EDA39 | • | 0.649 | |||||||||
| DL3220C | • | 0.649 | |||||||||
| AT2G26190 | • | 0.637 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 210 | |||
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 4e-27 | |
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 5e-06 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Score = 99.4 bits (248), Expect = 4e-27
Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 28 YHNCPSTN----FTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYG 83
+H C S T NS ++SNLN LLS+L SNA + KGF T+G P+ VYG
Sbjct: 1 FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNA----ASSSGKGFAAGTSGAAPDTVYG 56
Query: 84 LFLCRGDFGPETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISF 133
L CRGD C++C++ A S+ + CP K I Y+ C LRY + F
Sbjct: 57 LAQCRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106
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This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 210 | |||
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.95 | |
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.3 |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Probab=99.95 E-value=1e-27 Score=178.69 Aligned_cols=102 Identities=43% Similarity=0.864 Sum_probs=77.9
Q ss_pred ccCCC-C--Ccc-CCCchHHHHHHHHHHHHHHhhccCCCCCcccCeeeeecCCCCCeeEEEEEecCCCChhchHHHHHHH
Q 037707 28 YHNCP-S--TNF-TPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVA 103 (210)
Q Consensus 28 ~~~C~-~--~~~-~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a 103 (210)
|+.|+ + +++ +++++|+++|+.||..|+.+++...+ ++|+++..|.++++||||+||++|+++++|+.||+.+
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~----~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a 76 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSS----KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA 76 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccc----cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence 78899 3 566 57888999999999999999876521 3899998888889999999999999999999999999
Q ss_pred HHHhhhhCCCCceeEEEccceEEEEccccc
Q 037707 104 TSDTAQLCPFGKENTIGYEECLLRYSNISF 133 (210)
Q Consensus 104 ~~~~~~~C~~~~~a~i~~~~C~lRYs~~~f 133 (210)
+..++..|+.+++|+||+++|+||||+++|
T Consensus 77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 77 VANISSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence 999999999999999999999999999998
|
The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D. |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 210 | |||
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 5e-28 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 1e-08 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 210 | |||
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.97 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.97 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.48 | |
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.44 |
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-31 Score=196.82 Aligned_cols=107 Identities=19% Similarity=0.479 Sum_probs=98.0
Q ss_pred CCCcccccCCCCCccCCCchHHHHHHHHHHHHHHhhccCCCCCcccCeeeeecCC-CCCeeEEEEEecCCCChhchHHHH
Q 037707 22 DKPTYIYHNCPSTNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGH-EPNKVYGLFLCRGDFGPETCQNCV 100 (210)
Q Consensus 22 ~~~~~~~~~C~~~~~~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~-~~~~vYgl~qC~~Dls~~~C~~Cl 100 (210)
+++.++++.|++++|+++++|++||+.||+.|+++++.++. +|+++..|. ++++||||+|||||+++++|+.||
T Consensus 1 A~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~-----~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl 75 (108)
T 3a2e_A 1 ANTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGY-----DYKTSRAGSGGAPTAYGRATCKQSISQSDCTACL 75 (108)
T ss_dssp CCCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTS-----EEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHH
T ss_pred CCcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccC-----CceEeeccCCCCceEEEEEEEcCCCCHHHHHHHH
Confidence 36788999999899999999999999999999999887653 677776654 568999999999999999999999
Q ss_pred HHHHHHhhhhCCCCceeEEEccceEEEEccccc
Q 037707 101 SVATSDTAQLCPFGKENTIGYEECLLRYSNISF 133 (210)
Q Consensus 101 ~~a~~~~~~~C~~~~~a~i~~~~C~lRYs~~~f 133 (210)
+.|+.++++.||++++|+||+++|+||||+++|
T Consensus 76 ~~a~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F 108 (108)
T 3a2e_A 76 SNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108 (108)
T ss_dssp HHHHTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred HHHHHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence 999999999999999999999999999999998
|
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00