Citrus Sinensis ID: 037803

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550---
Protein Sequence
MKEKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLHA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccEEEEEccEEEcHHHHHHHHccccccccccccccccccHHHHHHHHccccccccccHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEcHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccHHHHHHcccccccccccccHcccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHEEccccEEcHHHHHHHHHcccccccccccccccccccHHHHHccccccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHccccccccEEEEEEcccccEEEEEcc
Coil and Loop (DISEMBL)
mkekvempitkvtgarkttASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAfsrplgalprlppylppstKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEIsidlcdpcvddtnskqEQSKFLARNVGRSTTSAIRQLAALSadgrgkenqlctnsmkkkgssvhkvqtgrtpvkrpsndckqtMRHLDRQKIQLACrlqnpenegartisvpderesgddgpnrisEDIVRCLSTILLRmssgkrkgtsenLHFLSTlaseesneetefqdpygicsqfgkrdigpykhlfaieadsidtnrtssSMFLVRRLKILLGKIAsfnlenlnhqEKLAFWINIYNSCMMnaflengipesPEMVVALMQKATIRVGGHLLNAITIEHFIlrlpyhskytfskgakndEMTARFMFGLELSEPLVTFALscgswsspavrvYTASEVESELEVAKREYLQAAvgissekfaipKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLergkneplsqfiqVMPYEFSFRYLLHA
Flexible Loop (DISEMBL)
mkekvempitkvtgarkttasrrasnaqrkyalqqdvdKLKKKLRHEENVHRALerafsrplgalprlpPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCVDDTNSKQEQSKFlarnvgrsttSAIRQLAalsadgrgkeNQLCTnsmkkkgssvhkvqtgrtpvkrpsndckqtmRHLDRQKIQLacrlqnpenegartisvpderesgddgpnrisedIVRCLSTILLRmssgkrkgtseNLHFLSTLaseesneeteFQDPYGICSQFGKRDIGPYKHLFAIEadsidtnrtsssMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAavgissekfaIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGkneplsqfiqvMPYEFSFRYLLHA
Low Complexity Region (SEG)
MKEKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDklkkklRHEENVHRALERAFSRPLGALPRLPPYLPPSTKellaevavleeevvrleeqvvHFRQDLYREAVYISSSKKNMEISIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLHA
Disordered region (IsUnstruct)
**********************************************************************YL***TKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCV**********************************************************************************************************************DIVRCLSTILLR*******************************DPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLL**
Disordered Region (DISOPRED)
*************************************DKLKKKLRHEENVHRALER*******************TKELLAEVAVLEEEVVRLEEQVVHFRQDLY******************************************************************************************************************************************RISEDIVRCLSTILL*********************************PYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSK************TARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCEL****************SQFIQVMPYEFSFRYLLHA
Disordered Region (DISEMBL)
MKEKVEMPITKVT******************ALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNS*************************KQTMRHLDRQKIQLACRLQNPENEGARTISV**********PNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTL***********QDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLHA
Disordered Region (DISPRO)
***************************QRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYI*******************************************************************************************************************************DDGPNRISEDIVRCLSTILLRMSS**************************FQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLHA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKEKVEMPITKVTGARKTTASRRASNAQRxxxxxxxxxxxxxxxxxxxxxxxxxxxxFSRPLGALPRLPPYLPPSxxxxxxxxxxxxxxxxxxxxxxxxxxxxLYREAVYISSSKKNMEISIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLHA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	553
359492067	573	PREDICTED: uncharacterized protein LOC10	0.994	0.959	0.732	0.0
255538406	533	transcription factor, putative [Ricinus	0.958	0.994	0.715	0.0
449446973	547	PREDICTED: uncharacterized protein LOC10	0.949	0.959	0.658	0.0
356552174	522	PREDICTED: uncharacterized protein LOC10	0.918	0.973	0.621	1e-174
356562303	525	PREDICTED: uncharacterized protein LOC10	0.929	0.979	0.616	1e-174
224137374	445	predicted protein [Populus trichocarpa]	0.797	0.991	0.684	1e-169
356509716	609	PREDICTED: uncharacterized protein LOC10	0.938	0.852	0.607	1e-167
357437941	547	hypothetical protein MTR_1g021040 [Medic	0.951	0.961	0.594	1e-162
144225467	570	hypothetical protein [Populus tremula] g	0.936	0.908	0.583	1e-158
144225451	570	hypothetical protein [Populus tremula]	0.936	0.908	0.583	1e-158

>gi|359492067|ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266128 [Vitis vinifera] gi|302142367|emb|CBI19570.3| unnamed protein product [Vitis vinifera]

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/553 (73%), Positives = 454/553 (82%), Gaps = 3/553 (0%)

Query: 2   KEKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRP 61
           K+KVEM  T+   A++ TA+RR  +  RK ALQQDVDKLKKKLRHEENVHRALERAF+RP
Sbjct: 20  KDKVEMQGTRGMDAKRATANRRGPSRDRKMALQQDVDKLKKKLRHEENVHRALERAFNRP 79

Query: 62  LGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEIS 121
           LGALPRLPPYLPP T ELLAEVA+LEEEVVRLEEQVVHFRQ LY+EAVYISSSKKNME  
Sbjct: 80  LGALPRLPPYLPPCTLELLAEVAILEEEVVRLEEQVVHFRQGLYQEAVYISSSKKNMESL 139

Query: 122 IDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKK-KG 180
            DL +P +   NSK++Q+KFL + V  S TSA R   +  AD RGKENQ   NS K  K 
Sbjct: 140 ADLYNPYLM-RNSKKDQTKFLVQTVDNSATSATRDAPSPPADRRGKENQSYANSTKNNKR 198

Query: 181 SSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDD 240
              +K Q   TPVKRP  +     +HLD QK+QL  R+ + EN   RT   PDER S DD
Sbjct: 199 DPNNKAQKISTPVKRPPIEHGSAEKHLDSQKLQLENRVVDQENAETRTSLTPDERLSADD 258

Query: 241 GPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFG 300
            PN+ISEDI+RCL +I LRMS+ K +GTSENL  L +LAS  S EETE QDPYGICS+FG
Sbjct: 259 KPNKISEDILRCLFSIFLRMSTLKSRGTSENLPSLPSLASHGSGEETELQDPYGICSEFG 318

Query: 301 KRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINI 360
           KRDIGPYKHLF+I+A SI+ NRT++S+FLV RLK LLGK+AS NL+ L HQEKLAFWIN 
Sbjct: 319 KRDIGPYKHLFSIQASSINLNRTANSLFLVHRLKRLLGKLASVNLQGLTHQEKLAFWINT 378

Query: 361 YNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKG 420
           YNSCMMNAFLE+GIP +PEMVV LM+KATI VGGHLLNAITIEHFILRLPYH KYTF KG
Sbjct: 379 YNSCMMNAFLEHGIPGNPEMVVELMRKATINVGGHLLNAITIEHFILRLPYHIKYTFPKG 438

Query: 421 AKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVG 480
           AKNDEMTAR ++GLELSEPLVTFALSCGSWSSPAVRVYTAS+VE+ELEVAKREYLQAAVG
Sbjct: 439 AKNDEMTARSIYGLELSEPLVTFALSCGSWSSPAVRVYTASQVENELEVAKREYLQAAVG 498

Query: 481 ISSEK-FAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQ 539
           IS+ K FAIPKLLDWYLLDFAKDFES LDWICLQLP ELGK+AIKCLERG +EPLSQF+Q
Sbjct: 499 ISTTKLFAIPKLLDWYLLDFAKDFESFLDWICLQLPSELGKEAIKCLERGNSEPLSQFVQ 558

Query: 540 VMPYEFSFRYLLH 552
           V+PYEFSFRYLLH
Sbjct: 559 VIPYEFSFRYLLH 571

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538406|ref|XP_002510268.1| transcription factor, putative [Ricinus communis] gi|223550969|gb|EEF52455.1| transcription factor, putative [Ricinus communis]

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/552 (71%), Positives = 452/552 (81%), Gaps = 22/552 (3%)

Query: 1   MKEKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSR 60
           MKEK+E+   K   A K   +R+AS+ +RK +LQQDVDKLKKKLR+EENVHRALERAF+R
Sbjct: 1   MKEKIEIKGNKQRNATKAAKTRQASSRERKISLQQDVDKLKKKLRYEENVHRALERAFNR 60

Query: 61  PLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEI 120
           PLGALPRLPPYLP ST ELLAEVAVLEEEVVRLEEQVVHFRQDLY+EAVYISSSK+N+E 
Sbjct: 61  PLGALPRLPPYLPASTLELLAEVAVLEEEVVRLEEQVVHFRQDLYQEAVYISSSKRNVES 120

Query: 121 SIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKK-K 179
             DL D    + NSKQ   K +ARN+                DG+ KENQLCTNS+K  K
Sbjct: 121 FADLYD-LSQNNNSKQANIKTIARNI----------------DGQEKENQLCTNSVKNNK 163

Query: 180 GSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGD 239
            SS+HK Q G+TP+K+   + KQ  + LD QK+Q++   +NP+   AR +S  DE  S +
Sbjct: 164 SSSIHKAQPGKTPMKKHPIENKQIEKCLDPQKLQVS--QENPKE--ARNVSTADEHLSAN 219

Query: 240 DGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQF 299
           D PN+ISEDIV+CLS I LRMSS K + T++NL FLS+L S+E+ EE E +DPY ICS+ 
Sbjct: 220 DNPNKISEDIVKCLSNIFLRMSSRKTRRTADNLSFLSSLVSQENGEEIECRDPYSICSEV 279

Query: 300 GKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWIN 359
           GK+DIGPYKHLFAIEA +I+ NRTS+S+FL+ RLK+LLGK+AS NL+NL HQEKLAFWIN
Sbjct: 280 GKKDIGPYKHLFAIEAGTINPNRTSNSLFLLHRLKLLLGKLASVNLQNLTHQEKLAFWIN 339

Query: 360 IYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSK 419
           IYNSCMMNAFLE+GIPESPEMVVALMQKATI VGGH LNAITIEHFILRLPYH KY FSK
Sbjct: 340 IYNSCMMNAFLEHGIPESPEMVVALMQKATINVGGHSLNAITIEHFILRLPYHLKYAFSK 399

Query: 420 GAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAV 479
           G KNDEMTAR  FGLELSEPLVTFALSCGSWSSPAVRVYTASEVE+EL+ AKREYLQAAV
Sbjct: 400 GTKNDEMTARSKFGLELSEPLVTFALSCGSWSSPAVRVYTASEVENELDAAKREYLQAAV 459

Query: 480 GISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQ 539
           G S+ KFAIPKLLDWYLLDFAKD ESLLDWICLQLP ELGK+AIKCLERGK+EP SQF+Q
Sbjct: 460 GFSTRKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAIKCLERGKSEPHSQFVQ 519

Query: 540 VMPYEFSFRYLL 551
           +MPYEFSFRYLL
Sbjct: 520 IMPYEFSFRYLL 531

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446973|ref|XP_004141244.1| PREDICTED: uncharacterized protein LOC101211254 [Cucumis sativus]

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/551 (65%), Positives = 428/551 (77%), Gaps = 26/551 (4%)

Query: 2   KEKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRP 61
           K  V+MP      A K + S R S+ QRK ALQQDVDKLKKKLRHEENV RAL+RAF+RP
Sbjct: 20  KGNVDMPEANFLDAAKASTSGRVSSRQRKVALQQDVDKLKKKLRHEENVGRALKRAFTRP 79

Query: 62  LGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEIS 121
           LGALPRLPP+LPP+  ELLAEVAVLEEEVVRLEEQVV FRQDLY+EAV ISSSKK ME+S
Sbjct: 80  LGALPRLPPFLPPNMLELLAEVAVLEEEVVRLEEQVVLFRQDLYQEAVNISSSKKTMELS 139

Query: 122 IDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSM-KKKG 180
                      NSKQ QSK   +                     GKEN+   NS    KG
Sbjct: 140 --------PKNNSKQAQSKLSVQKTDNVV---------------GKENESRMNSTSNNKG 176

Query: 181 SSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDD 240
           SS+ K+ T +TPVK+P    K + +  +  K+ L  R  NPEN  AR +  PD++ SGDD
Sbjct: 177 SSIKKIHTIKTPVKKPPVRNKSSEKP-NSPKLNLENRTANPENAEARQLRAPDDKVSGDD 235

Query: 241 GPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFG 300
            PN ISE+I++CLS+ILLRMSS K +G +E+LH  S + + ++ EET+  DPYGICS+FG
Sbjct: 236 SPNSISENILKCLSSILLRMSSIKNRGATESLHLFSMVTTMQT-EETDLPDPYGICSEFG 294

Query: 301 KRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINI 360
           +RDIGPYK++  +EA SI+T RT++S+FL +RLK+LLGK+AS NL+ L HQEKLAFWINI
Sbjct: 295 RRDIGPYKNVHTVEACSINTKRTTNSLFLFQRLKLLLGKLASVNLQRLTHQEKLAFWINI 354

Query: 361 YNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKG 420
           YNSCM+NAFLE+GIPESPEMVVALMQKATI V GHLLNAITIEHFILRLPYHS+Y FSK 
Sbjct: 355 YNSCMINAFLEHGIPESPEMVVALMQKATINVSGHLLNAITIEHFILRLPYHSQYAFSKS 414

Query: 421 AKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVG 480
           AK DE T R +FGLELSEPLVTFALSCGSWSSPAVRVYTAS+VE+ELE+AKREYL+AAVG
Sbjct: 415 AKYDEKTFRSIFGLELSEPLVTFALSCGSWSSPAVRVYTASQVENELELAKREYLEAAVG 474

Query: 481 ISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQV 540
           ISSEKF IPKLLDWYLLDFAKD +SL+DW+CLQLP ELGK+AIK +E  +N+PLSQF++V
Sbjct: 475 ISSEKFGIPKLLDWYLLDFAKDLDSLVDWVCLQLPSELGKEAIKLMEGRRNQPLSQFVKV 534

Query: 541 MPYEFSFRYLL 551
           +PYEFSFRYLL
Sbjct: 535 IPYEFSFRYLL 545

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552174|ref|XP_003544444.1| PREDICTED: uncharacterized protein LOC100817917 [Glycine max]

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 337/542 (62%), Positives = 408/542 (75%), Gaps = 34/542 (6%)

Query: 16  RKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPS 75
           R    SR+AS+ +RK ALQQDVD LKKKLRHEEN+HRALERAF+RPLGALPRLPPYLPP 
Sbjct: 7   RNANKSRKASSRERKLALQQDVDTLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPY 66

Query: 76  TKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISI----DLCDPCVDD 131
              LLAEVAVLEEE+VRLEEQVVHFRQDLY+EAVY+SSS + +E S+    +  +P +D 
Sbjct: 67  IPALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTMD- 125

Query: 132 TNSKQEQSKFLARNVGRST-TSAIRQLAALSADGR-GKENQLCTNSMKKKGSSVHKVQTG 189
            + K ++ K L +  G ST TSA +    L  D R GKENQ CTNS K +  S +  QT 
Sbjct: 126 -SPKLDKLKSLTQTTGNSTATSATKPTTTLPDDNRQGKENQSCTNSSKSRKQSSN--QTN 182

Query: 190 RTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDDGPNRISEDI 249
           +TP+K+ +N   Q  + LD  K +   +++N +    R  S P +       PN ISE+I
Sbjct: 183 KTPIKKINNQSLQ--KKLDHPKRKKEPKVKNQQVADVRNHS-PHKNSPEAQSPNIISENI 239

Query: 250 VRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKH 309
           ++CLS I+LRMS+ K                       EF DPYGIC +FGKRDIGPYK 
Sbjct: 240 LKCLSNIILRMSALK---------------------NPEFGDPYGICLEFGKRDIGPYKQ 278

Query: 310 LFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAF 369
           L++I+  S +  RT++++FL+ RLK+L  K+AS NLENLNHQEKLAFWINIYNSCMMNAF
Sbjct: 279 LWSIDVKSFNPKRTANTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINIYNSCMMNAF 338

Query: 370 LENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTAR 429
           +ENGIPE+P+M VALM+KATI VGGH+L+A TIEHFILRLPYH ++TFSKG KN EM AR
Sbjct: 339 IENGIPENPQMAVALMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNHEMKAR 398

Query: 430 FMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIP 489
            ++G+ELSEPLVTFALS G+WSSPAVRVYTAS+VE+ELEVAKREYLQAA+G S+ KFAIP
Sbjct: 399 SIYGMELSEPLVTFALSSGTWSSPAVRVYTASQVENELEVAKREYLQAAIGFSTSKFAIP 458

Query: 490 KLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRY 549
           KLLDWYLL+FAKD ESLLDWICLQLP ELGK+A+K LE  K EPLSQF+Q+MPYEFSFRY
Sbjct: 459 KLLDWYLLNFAKDLESLLDWICLQLPSELGKEALKFLEERKTEPLSQFVQIMPYEFSFRY 518

Query: 550 LL 551
           L+
Sbjct: 519 LI 520

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562303|ref|XP_003549411.1| PREDICTED: uncharacterized protein LOC100801978 [Glycine max]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 333/540 (61%), Positives = 406/540 (75%), Gaps = 26/540 (4%)

Query: 16  RKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPS 75
           R    S +AS+ +RK ALQQDVD+LKK+LRHEEN+HRALERAF+RPLGALPRLPPYLPP 
Sbjct: 6   RNANKSGKASSRERKLALQQDVDRLKKQLRHEENIHRALERAFNRPLGALPRLPPYLPPY 65

Query: 76  TKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISI----DLCDPCVDD 131
              LLAEVAVLEEE+VRLEEQVVHFRQDLY+EAVY+SSS + +E S+    +  +P +D 
Sbjct: 66  ILALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTLDS 125

Query: 132 TNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQLCTNSMKKKGSSVHKVQTGRT 191
                                 ++ L   + D +GKENQ CTNS K +  S +  Q  +T
Sbjct: 126 P-----------------KLDKLKSLTQTAEDRQGKENQSCTNSSKSRQQSSN--QMNKT 166

Query: 192 PVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDDGPNRISEDIVR 251
           P+K  + D +   + LD  K +   R+ N +    R  S P +       PN ISE+I++
Sbjct: 167 PIK--NIDSQSLQKRLDHPKRKQEPRVNNQQIADVRNHS-PHKNSPEAQSPNIISENILK 223

Query: 252 CLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLF 311
           CLS ILLRMS+ K  G++ ++  L  L  +  +EE +F DPYGIC +FGKRDIGPY+ L 
Sbjct: 224 CLSNILLRMSAVKNPGSTCDMAPLWDLKPQNCDEEADFWDPYGICLEFGKRDIGPYRQLC 283

Query: 312 AIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLE 371
           AI+A S +  RT++++FL+ RLK+L  K+AS NLENLNHQEKLAFWINIYNSCMMNAF+E
Sbjct: 284 AIDAKSFNPKRTANTLFLLHRLKLLFRKVASVNLENLNHQEKLAFWINIYNSCMMNAFIE 343

Query: 372 NGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFM 431
           NGIPE+P+M VALM+KATI VGGH+L+A TIEHFILRLPYH K+TFSKG KN +MTAR +
Sbjct: 344 NGIPENPQMAVALMRKATINVGGHVLSATTIEHFILRLPYHWKFTFSKGTKNHQMTARSI 403

Query: 432 FGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSEKFAIPKL 491
           +GLELSEPLVTFALS G+WSSPAVRVYTAS+VE+ELEVAKREYLQAA+G S+ KFAIPKL
Sbjct: 404 YGLELSEPLVTFALSSGTWSSPAVRVYTASQVENELEVAKREYLQAAIGFSTSKFAIPKL 463

Query: 492 LDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLL 551
           LDWYLL+FAKD ESLLDWICLQLP ELGK+AIK LE  K EPLSQF+Q+MPYEFSFRYL+
Sbjct: 464 LDWYLLNFAKDLESLLDWICLQLPSELGKEAIKFLEERKTEPLSQFVQIMPYEFSFRYLI 523

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137374|ref|XP_002327110.1| predicted protein [Populus trichocarpa] gi|222835425|gb|EEE73860.1| predicted protein [Populus trichocarpa]

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/444 (68%), Positives = 357/444 (80%), Gaps = 3/444 (0%)

Query: 111 ISSSKKNMEISIDLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALSADGRGKENQ 170
           +SSSK+N+E   DL      + N K +QSK LA+NV  S TS IR L +LSADG GKEN 
Sbjct: 1   MSSSKRNVESVSDLYH-LYPNKNPKPDQSKSLAQNVDESATSTIRHLPSLSADGTGKENA 59

Query: 171 LCT-NSMKK-KGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGART 228
             T NS KK KGSS++K QT R  VKRPS D +   + LD  K QL CR+ + EN  AR+
Sbjct: 60  FSTANSRKKSKGSSINKAQTSRNMVKRPSEDNRPAEKKLDSHKSQLECRVPDQENAEARS 119

Query: 229 ISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETE 288
                E  SGD  PN++SEDI++CLS+I +RMSS   + T++NL FLSTL S+E+ EE E
Sbjct: 120 HVTASEGVSGDASPNKLSEDILKCLSSIFVRMSSMNNRRTADNLSFLSTLVSQENEEEAE 179

Query: 289 FQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENL 348
            QDPYGICS+FGKRDIGPYK LF+IE+ +I+ NRTS+S+FL+ RL++L GK+AS NL+NL
Sbjct: 180 CQDPYGICSEFGKRDIGPYKRLFSIESGTINPNRTSNSLFLLHRLELLFGKLASVNLQNL 239

Query: 349 NHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILR 408
            HQ+KLAFWINIYNSCMMNAFLE+GIPESPE VV LM+KATI +GGHLLNAITIEHFILR
Sbjct: 240 THQKKLAFWINIYNSCMMNAFLEHGIPESPETVVELMRKATINIGGHLLNAITIEHFILR 299

Query: 409 LPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELE 468
           LPY+SKYT SKGAKNDEM AR  FGLELSEPLV+FAL CGSWSSPAVRVYTA++VE+ELE
Sbjct: 300 LPYYSKYTISKGAKNDEMAARNKFGLELSEPLVSFALCCGSWSSPAVRVYTAAQVENELE 359

Query: 469 VAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLER 528
            AKR+YLQAA+GI++ KFAIPKLLDWYLLDFAKD ESLLDWICLQLP ELGK+AI CLE 
Sbjct: 360 EAKRDYLQAAIGITTSKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAINCLEN 419

Query: 529 GKNEPLSQFIQVMPYEFSFRYLLH 552
           GKNEP S F+QVMPYEF FRYLL+
Sbjct: 420 GKNEPHSHFVQVMPYEFGFRYLLY 443

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509716|ref|XP_003523592.1| PREDICTED: uncharacterized protein LOC100807554 [Glycine max]

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 335/551 (60%), Positives = 399/551 (72%), Gaps = 32/551 (5%)

Query: 3   EKVEMPITKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPL 62
           EK EM  +   GA       + S+  RK ALQQDVD+LKKKL+ EEN+HRALERAF+RPL
Sbjct: 87  EKAEMRGSSRGGANNAVKGGKTSSKDRKLALQQDVDRLKKKLKREENIHRALERAFNRPL 146

Query: 63  GALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISI 122
           GALPRLPPYLPP T  LLAEVAVLEEE+VRLEEQVVHFRQDLY+EAVY+SSSK  +E S 
Sbjct: 147 GALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEQSA 206

Query: 123 DLCDPCVDDTNSKQEQSKFLARNVGRSTTSAIRQLAALS--ADGRGKENQLCTNSMKKKG 180
            +                    N   +++  + +L +LS   DG GKENQ CTNS K   
Sbjct: 207 RV-------------------NNASPNSSPKLGKLKSLSQTMDGHGKENQSCTNSFKSNK 247

Query: 181 SSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISVPDERESGDD 240
            S  K QT ++P+K+   D K   +  D  K Q+   L++      R +    E   GD+
Sbjct: 248 QSTCKGQTTKSPIKKLPIDNKSLQKRRDPPKKQV---LKDQPIAEVRNLR---ENPQGDE 301

Query: 241 GPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICSQFG 300
            PN ISE+I++CLS+I+LRMS+ K   ++ ++  L T  S+   E  EF DPY IC +FG
Sbjct: 302 SPNIISENILKCLSSIILRMSAAKNLDSTADVPPLRTPKSKNCVEGIEFWDPYSICLEFG 361

Query: 301 KRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINI 360
           KRDIGPYK L +IE  S D  RT+ S+FL+ RLK+LL K+A  N+ENLNHQEKLAFWINI
Sbjct: 362 KRDIGPYKQLRSIETKSFDPKRTAKSLFLLHRLKLLLRKLACVNIENLNHQEKLAFWINI 421

Query: 361 YNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKG 420
           YNSCMMNA++ENGIPESPEMV ALMQKATI VGGHLL+A TIEH ILRLPYH K+T SKG
Sbjct: 422 YNSCMMNAYIENGIPESPEMVAALMQKATINVGGHLLSATTIEHCILRLPYHWKFTLSKG 481

Query: 421 AKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVG 480
            KN E      +GLELSEPLVTFALSCG+WSSPAVR+YTAS+VE+ELE+AKREYLQAAVG
Sbjct: 482 GKNHE-----TYGLELSEPLVTFALSCGTWSSPAVRIYTASQVENELEMAKREYLQAAVG 536

Query: 481 ISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQV 540
           IS  KF IPKLLDWYLLDFAKD ESLLDWICLQLP ++GK+AIK LE+ K  PLSQF+ +
Sbjct: 537 ISISKFLIPKLLDWYLLDFAKDLESLLDWICLQLPSDVGKEAIKFLEKRKTGPLSQFVHI 596

Query: 541 MPYEFSFRYLL 551
           MPYEF+FRYLL
Sbjct: 597 MPYEFNFRYLL 607

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437941|ref|XP_003589246.1| hypothetical protein MTR_1g021040 [Medicago truncatula] gi|355478294|gb|AES59497.1| hypothetical protein MTR_1g021040 [Medicago truncatula]

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 327/550 (59%), Positives = 403/550 (73%), Gaps = 24/550 (4%)

Query: 16  RKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPS 75
           R  +   ++S  +RK ALQQDVDKLKKKL+HEEN+ +ALERAF+RPLGALPRLPPYLPP 
Sbjct: 6   RNGSKGGKSSTIERKLALQQDVDKLKKKLKHEENIRKALERAFNRPLGALPRLPPYLPPY 65

Query: 76  TKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCVDDTNS- 134
              LLAEVAVLEEE+V LEE+VVHFRQDLY EAVY+SSSK  +E       P  +++N+ 
Sbjct: 66  ILALLAEVAVLEEEIVWLEEKVVHFRQDLYHEAVYLSSSKTKLE----HLSPLPNNSNTA 121

Query: 135 ------KQEQSKFLARNV--GRSTTSAIRQLAALSADGRGKENQLCTNSMKKKGSSVHKV 186
                 K ++ K L++ V    + TS  R    L  +G+GKEN+  TNS K +       
Sbjct: 122 STMNSPKLDELKSLSQTVDDNPAATSTTRPTIPLQDNGQGKENRSGTNSFKSRLQPSK-- 179

Query: 187 QTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPENEGARTISV----PDERESGDDGP 242
           Q  R+P+K    D K ++     +K     R Q P  +  +   +    P +  +  D P
Sbjct: 180 QMSRSPIKNLHVDNKSSLH----KKSHSPKRKQQPRVKEQKIAELRQPSPHQMSTEADCP 235

Query: 243 NRISEDIVRCLSTILLRMSSGKRKGTSENLHF-LSTLASEESNEETEFQDPYGICSQFGK 301
           N ISE+I++CLS+ILLRMSS K  G++ ++   L  L  +   E TEF DPYGIC +FG+
Sbjct: 236 NVISENILKCLSSILLRMSSVKYPGSAGDISSPLWALKPQNRVEGTEFWDPYGICLEFGR 295

Query: 302 RDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIY 361
           RDIGPYKHL AI+A S +  RT +++FL+ RLK+L  K+ S NLENLNHQEKLAFWIN Y
Sbjct: 296 RDIGPYKHLCAIDAKSFNAKRTGNTLFLLHRLKLLFRKLTSVNLENLNHQEKLAFWINTY 355

Query: 362 NSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGA 421
           NSCMMN F+ENGIP++PEM VA+M+KA I VGGH+L+A TIEHFILRLP+H K+T SKGA
Sbjct: 356 NSCMMNEFIENGIPDNPEMAVAMMRKAKINVGGHILSATTIEHFILRLPHHYKFTISKGA 415

Query: 422 KNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGI 481
           KN +M AR ++GLELSEPLVTFALSCG+WSSPAVRVYTAS+VE+ELEVAKREYLQA VGI
Sbjct: 416 KNHDMIARSIYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREYLQATVGI 475

Query: 482 SSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVM 541
           S+ KFAIPKLLDWYL +FAKD ESL+DWICLQLP ELGK+AIK LE  KNEPLSQF+Q+M
Sbjct: 476 STSKFAIPKLLDWYLQNFAKDLESLMDWICLQLPSELGKEAIKLLEERKNEPLSQFVQIM 535

Query: 542 PYEFSFRYLL 551
           PY+FSFRYL 
Sbjct: 536 PYDFSFRYLF 545

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|144225467|emb|CAM84252.1| hypothetical protein [Populus tremula] gi|144225469|emb|CAM84253.1| hypothetical protein [Populus tremula]

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 343/588 (58%), Positives = 398/588 (67%), Gaps = 70/588 (11%)

Query: 10  TKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLP 69
           ++  G  K+  + R +N +RK AL QDVDKLKKKLRHEENVHRALERAF+RPLGALPRLP
Sbjct: 7   SRAVGGHKSAINWRKANKERKLALLQDVDKLKKKLRHEENVHRALERAFTRPLGALPRLP 66

Query: 70  PYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCV 129
           PYLPP   ELLAEVAVLEEEVVRLEEQVV+FRQ LY+EAVY+ SSKKN+E S D  D   
Sbjct: 67  PYLPPYILELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYV-SSKKNVENSKDAIDQQP 125

Query: 130 DDTNSKQEQSKFLARNVGRSTTSAIRQLAALSA--------------------------- 162
             T SK  +SK L+ N   S T   R   +L+                            
Sbjct: 126 STTRSKHARSKSLSLNETNSATFTARPQPSLARCTSSKRLFSTDPIIERSGQCSNRPANR 185

Query: 163 ----------------DGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRH 206
                           DGRGKEN+ C N +K K S   K+    TPVKR  N  +   + 
Sbjct: 186 GKYASGKPNPSSSLVDDGRGKENRSCINYVKDKQSP-DKMAKITTPVKRTPNKRESEEKS 244

Query: 207 LDRQKIQLACRLQNPENEGARTISVPDERESGDD-GPNRISEDIVRCLSTILLRMSSGKR 265
           L+  K+QL CRL   E     T +  ++R   ++  PN+++EDIV+CLS+I LRMS+G  
Sbjct: 245 LEPSKLQLECRLVEQERAQESTSAYMNDRICENNITPNKLTEDIVKCLSSIFLRMSTG-- 302

Query: 266 KGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSS 325
                                 E +DPYG+ ++F  RDIG YKHL+AIEA SID NRT+S
Sbjct: 303 ---------------------NEIRDPYGMSAEFKIRDIGSYKHLYAIEASSIDLNRTTS 341

Query: 326 SMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALM 385
           ++FL++RLK LLGK+AS  LE L HQ+KLAFWIN YNSCMMNA LE+GIPE+PEMVVALM
Sbjct: 342 ALFLLQRLKFLLGKLASAKLEGLTHQQKLAFWINTYNSCMMNAILEHGIPETPEMVVALM 401

Query: 386 QKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFAL 445
           QKATI VGGHLLNAITIEHFILRLPYH K+T  K  KNDEM AR  FG E SEPLVTFAL
Sbjct: 402 QKATITVGGHLLNAITIEHFILRLPYHLKFTCPKAVKNDEMKARSFFGFEWSEPLVTFAL 461

Query: 446 SCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGIS-SEKFAIPKLLDWYLLDFAKDFE 504
            CGSWSSPAVRVYTAS VE ELEVAKR+YLQA VGIS + K  IPKLLDWYLLDFAKD E
Sbjct: 462 CCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDME 521

Query: 505 SLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLH 552
           SLLDWICLQLP EL  +A+KCLER   +PLSQ +QVMPY+FSFR LLH
Sbjct: 522 SLLDWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFRLLLH 569

Source: Populus tremula

Species: Populus tremula

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|144225451|emb|CAM84244.1| hypothetical protein [Populus tremula]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 343/588 (58%), Positives = 398/588 (67%), Gaps = 70/588 (11%)

Query: 10  TKVTGARKTTASRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLP 69
           ++  G  K+  + R +N +RK AL QDVDKLKKKLRHEENVHRALERAF+RPLGALPRLP
Sbjct: 7   SRAVGGHKSAINWRKANKERKLALLQDVDKLKKKLRHEENVHRALERAFTRPLGALPRLP 66

Query: 70  PYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYREAVYISSSKKNMEISIDLCDPCV 129
           PYLPP   ELLAEVAVLEEEVVRLEEQVV+FRQ LY+EAVY+ SSKKN+E S D  D   
Sbjct: 67  PYLPPYILELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYV-SSKKNVENSKDAIDQQP 125

Query: 130 DDTNSKQEQSKFLARNVGRSTTSAIRQLAALSA--------------------------- 162
             T SK  +SK L+ N   S T   R   +L+                            
Sbjct: 126 STTRSKHARSKSLSLNETNSATFTPRPQPSLARCTSSKRLFSTDPIIERSGQCSNRPANR 185

Query: 163 ----------------DGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRH 206
                           DGRGKEN+ C N +K K S   K+    TPVKR  N  +   + 
Sbjct: 186 GKYASGKPNPSSSLVDDGRGKENRSCINYVKDKQSP-DKMAKITTPVKRTPNKRESEEKS 244

Query: 207 LDRQKIQLACRLQNPENEGARTISVPDERESGDD-GPNRISEDIVRCLSTILLRMSSGKR 265
           L+  K+QL CRL   E     T +  ++R   ++  PN+++EDIV+CLS+I LRMS+G  
Sbjct: 245 LEPSKLQLECRLVEQERAQESTSAYMNDRICENNITPNKLTEDIVKCLSSIFLRMSTG-- 302

Query: 266 KGTSENLHFLSTLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSS 325
                                 E +DPYG+ ++F  RDIG YKHL+AIEA SID NRT+S
Sbjct: 303 ---------------------NEIRDPYGMSAEFKIRDIGSYKHLYAIEASSIDLNRTTS 341

Query: 326 SMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALM 385
           ++FL++RLK LLGK+AS  LE L HQ+KLAFWIN YNSCMMNA LE+GIPE+PEMVVALM
Sbjct: 342 ALFLLQRLKFLLGKLASAKLEGLTHQQKLAFWINTYNSCMMNAILEHGIPETPEMVVALM 401

Query: 386 QKATIRVGGHLLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFAL 445
           QKATI VGGHLLNAITIEHFILRLPYH K+T  K  KNDEM AR  FG E SEPLVTFAL
Sbjct: 402 QKATITVGGHLLNAITIEHFILRLPYHLKFTCPKAVKNDEMKARSFFGFEWSEPLVTFAL 461

Query: 446 SCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGIS-SEKFAIPKLLDWYLLDFAKDFE 504
            CGSWSSPAVRVYTAS VE ELEVAKR+YLQA VGIS + K  IPKLLDWYLLDFAKD E
Sbjct: 462 CCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDME 521

Query: 505 SLLDWICLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFRYLLH 552
           SLLDWICLQLP EL  +A+KCLER   +PLSQ +QVMPY+FSFR LLH
Sbjct: 522 SLLDWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFRLLLH 569

Source: Populus tremula

Species: Populus tremula

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	553
TAIR|locus:2115164	610	AT4G37080 "AT4G37080" [Arabido	0.678	0.614	0.510	3.3e-117
TAIR|locus:2165487	540	AT5G42690 [Arabidopsis thalian	0.676	0.692	0.570	1.3e-109
TAIR|locus:2043235	498	AT2G39690 "AT2G39690" [Arabido	0.566	0.628	0.442	3.3e-65
TAIR|locus:2175806	691	AT5G60720 "AT5G60720" [Arabido	0.481	0.384	0.396	5.4e-55
TAIR|locus:2101242	505	AT3G12540 [Arabidopsis thalian	0.556	0.609	0.403	9.9e-55
TAIR|locus:2171499	618	AT5G47380 "AT5G47380" [Arabido	0.564	0.504	0.309	2.7e-42
TAIR|locus:2089220	582	AT3G13000 [Arabidopsis thalian	0.468	0.445	0.342	9.5e-40
TAIR|locus:2015666	529	AT1G16750 "AT1G16750" [Arabido	0.471	0.493	0.357	3e-37
TAIR|locus:2049008	707	AT2G23700 "AT2G23700" [Arabido	0.538	0.421	0.335	7e-37
TAIR|locus:2009854	445	AT1G43020 "AT1G43020" [Arabido	0.412	0.512	0.314	1.3e-23

TAIR|locus:2115164 AT4G37080 "AT4G37080" [Arabidopsis thaliana (taxid:3702)]

 Score = 938 (335.3 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
 Identities = 200/392 (51%), Positives = 258/392 (65%)

Query:   163 DGRGKENQLCTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLACRLQNPE 222
             D RGKENQ  +N+ K K +         +P K+         +     K + A    +  
Sbjct:   233 DVRGKENQTSSNASKDKKNK-------ESPEKKLGRFLTSVKKKKPLIKPEAAA---DKH 282

Query:   223 NEGARTISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENL-HFLSTLASE 281
             +E  + + + D+R +  D   +  E +    S      S       SE+L   L T+   
Sbjct:   283 SESTK-LQL-DDRLADQD---KAQESVSGSSSEDKTLQSGNVANRVSEDLLKCLVTIILR 337

Query:   282 ESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIA 341
              S+ +    DPY  CS++  R++G YKH  +++  S+D  R  ++ FL+ RLK LL K++
Sbjct:   338 ISSSKDIVLDPYNNCSEWRTRELGAYKHFSSVDTSSVDLGRRINASFLIHRLKFLLNKLS 397

Query:   342 SFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAIT 401
               NL+ L+HQ+KLAFWIN YNSC+MNAFLE+GIP +PEMVVALMQKATI VGGH LNAIT
Sbjct:   398 VVNLDGLSHQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGGHSLNAIT 457

Query:   402 IEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTAS 461
             IEHFILRLPYH K+T  K A ++EM A   FGLE SEPLVTFAL+CGSWSSPAVRVYTA+
Sbjct:   458 IEHFILRLPYHLKFTCPKTATHEEMRAHSTFGLEWSEPLVTFALACGSWSSPAVRVYTAA 517

Query:   462 EVESELEVAKREYLQAAVGIS-SEKFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGK 520
              VE ELE AKR+YLQA+VGIS + K  +PK+LDWYLLDFAKD ESLLDW+CLQLP +L +
Sbjct:   518 NVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPDKLRE 577

Query:   521 KAIKCLERGKNEPLSQFIQVMPYEFSFRYLLH 552
             +A KC+ER   E L + +QV+PY+FSFR LLH
Sbjct:   578 EATKCMERKNKESLMELVQVVPYDFSFRLLLH 609

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165487 AT5G42690 [Arabidopsis thaliana (taxid:3702)]

 Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
 Identities = 226/396 (57%), Positives = 283/396 (71%)

Query:   161 SADGRGKENQL----CTNSMKKKGSSVHKVQTGRTPVKRPSNDCKQTMRHLDRQKIQLAC 216
             S   R  E+ L    C+ S+ +KG   +K+    T +K P    K T+ H    K   A 
Sbjct:   158 STSARESESPLSRAPCSVSVCRKGKE-NKLSA--TSIKTPMK--KTTIAHTQLNKSLEAQ 212

Query:   217 RLQNPENEGARTISVPDERESGDDGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLS 276
             +L+  ++   R  +       G D PN+ISED+V+CLS I +RMSS KR   ++      
Sbjct:   213 KLKQ-DSHRCRKTNAERSSHGGGDEPNKISEDLVKCLSNIFMRMSSIKRSMVTK------ 265

Query:   277 TLASEESNEETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSS-MFLVRRLKI 335
                S+E++++T F+DPYGICS F +RDIG YK+   +E  S++ NRTSSS +FL+R+LK 
Sbjct:   266 ---SQENDKDTAFRDPYGICSSFRRRDIGRYKNFSDVEEASLNQNRTSSSSLFLIRQLKR 322

Query:   336 LLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGH 395
             LLG+++  N++ LN QEKLAFWINIYNSCMMN FLE+GIPESP+MV  LMQKATI VGGH
Sbjct:   323 LLGRLSLVNMQKLNQQEKLAFWINIYNSCMMNGFLEHGIPESPDMVT-LMQKATINVGGH 381

Query:   396 LLNAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAV 455
              LNAITIEHFILRLP+HSKY   KG+K +EM  R  FGLELSEPLVTFALSCGSWSSPAV
Sbjct:   382 FLNAITIEHFILRLPHHSKYISPKGSKKNEMAVRSKFGLELSEPLVTFALSCGSWSSPAV 441

Query:   456 RVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLLDWYLLDFAKDFESLLDWICLQLP 515
             RVYTAS+VE ELEVAKREYL+A+VGIS  K  IPKL+DWY  DFAKD ESLLDWI LQLP
Sbjct:   442 RVYTASKVEEELEVAKREYLEASVGISVVKIGIPKLMDWYSHDFAKDIESLLDWIFLQLP 501

Query:   516 CELGKKAIKCLERGKNE-PLSQFIQVMPYEFSFRYL 550
              ELGK A+ C+E+G ++ P S  + ++PY+F+FRYL
Sbjct:   502 TELGKDALNCVEQGMSQSPSSTLVHIIPYDFTFRYL 537

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2043235 AT2G39690 "AT2G39690" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 147/332 (44%), Positives = 204/332 (61%)

Query:   234 ERESGDDGPNRISEDIVRCLSTILLRMS--SGKRKGTSENLHFLSTLASEESNEETEFQ- 290
             E ++ DD PN +SE ++ CL  I L ++  S K KG   +L    +  S +SN  + +Q 
Sbjct:   170 EAKTKDD-PNEVSEQLINCLIGIYLELNHVSSKTKG-DVSLSRRPSSCSRKSNTYSYYQN 227

Query:   291 ----DPYGIC--SQFG-KRDIGPYKHLFAIEADSID-TNRTSSSMFLVRRLKILLGKIAS 342
                 DPY +   S  G  RDIGPYK+   I   SID T+ T      V RL +L+ K++ 
Sbjct:   228 AMNLDPYHVLPDSSGGVTRDIGPYKNFIHISRSSIDVTHFTHYCSPAVPRLSVLMEKLSE 287

Query:   343 FNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITI 402
              +L  L +++KLAFWINIYN+C+M+AFLE G+P S   ++ LM KA++ VGG +LNA+ I
Sbjct:   288 VDLSFLTYKQKLAFWINIYNACIMHAFLEYGLPSSHNRLLTLMNKASLNVGGIVLNALAI 347

Query:   403 EHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASE 462
             EHF+LR P   +          E   R  +GL  SEP VTFAL  GSWSSPA+RVYTA E
Sbjct:   348 EHFVLRHPCEPE---DDSLDEKETLLRHTYGLGYSEPNVTFALCRGSWSSPALRVYTADE 404

Query:   463 VESELEVAKREYLQAAVGISSEK-FAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKK 521
             V ++L  A+ EYL+A+VG+SS+K   +P+LL W++ DFA D ESLL+WI  QLP     K
Sbjct:   405 VVNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLK 464

Query:   522 AI--KCLERGKNEPLSQFIQVMPYEFSFRYLL 551
              +  +CL+R    PL++ +++  Y   FRYLL
Sbjct:   465 GMIMECLKRKAKVPLAKIVEIQTYGHEFRYLL 496

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175806 AT5G60720 "AT5G60720" [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
 Identities = 115/290 (39%), Positives = 183/290 (63%)

Query:   283 SNEETEFQDPYGICSQFGK--RDIGPYKHLFAIEADSIDTN--RTSSSMFLVRRLKILLG 338
             S +E+  QDPYGI        RDIGPYK+L    + S+D+    +SSS+ L+++L++L+ 
Sbjct:   403 SYKESRQQDPYGIFDVESSLARDIGPYKNLVIFTSSSMDSKCISSSSSVSLIQKLRVLMN 462

Query:   339 KIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALM-QKATIRVGGHLL 397
              + + +L+ L+HQ+KLAFWIN++N+C+M+ +L++G+P++ E + +L+  KAT+ VGG  +
Sbjct:   463 NLETVDLKVLSHQQKLAFWINMFNACVMHGYLQHGVPKTAERLQSLVYNKATMNVGGKNI 522

Query:   398 NAITIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRV 457
             +A TIEH ILR    S  T  +   ++EM  R ++G+E ++P +TFALSCG+ SSPAVR+
Sbjct:   523 SAHTIEHCILRKSTSSTMTQDR---HEEMIIRKLYGVEATDPNITFALSCGTRSSPAVRI 579

Query:   458 YTASEVESELEVAKREYLQAAVGISSEK-FAIPKLLDWYLLDFA-----------KDFES 505
             YT   V +ELE +K EYLQA++ +++ K   +P+LL  +  DF            +   S
Sbjct:   580 YTGEGVTTELEKSKLEYLQASLVVTAAKRIGLPELLLKHATDFVVLTADGGTGEMEQLGS 639

Query:   506 LLDWICLQLPCE--LGKKAIKCLER--GKNEPLSQFIQVMPYEFSFRYLL 551
             L+ W+C QLP    L K  + C +    K    S  ++ +PY+F F+YLL
Sbjct:   640 LVKWVCNQLPTSGSLRKSMVDCFKNPNSKASSSSSAVEKIPYDFEFQYLL 689

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2101242 AT3G12540 [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 131/325 (40%), Positives = 191/325 (58%)

Query:   242 PNRISEDIVRCLSTILLRM--SSGKRKG--TSENL---HFLSTLASEES--NEETEFQDP 292
             PN +SED+V+CL  I L +  SS +R+G  T   L   H  +     +S  +      DP
Sbjct:   181 PNGVSEDLVKCLMGIYLELNRSSREREGSKTVSKLSLTHLKNASFKRKSVYDHNASNLDP 240

Query:   293 YGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQE 352
             YG       RDIG YK+   I   SID +R S     +  L++L  K++  +L  LNH++
Sbjct:   241 YGAVMGTSLRDIGEYKNFIHITRTSIDVSRLSDCSTSLVNLRVLKEKLSKVDLSFLNHKK 300

Query:   353 KLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRLPYH 412
             K+AFWIN YN+C+MN FLE+G+P S E ++ +++ ATI VGG  L+A+ IE  IL+ P  
Sbjct:   301 KMAFWINTYNACVMNGFLEHGLPSSKEKLLTILKMATIDVGGTQLSALDIEGSILQSPCE 360

Query:   413 SKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKR 472
              + + S G    E+  +  +G    EP + F L  G WSSPA+RVYTA +V +EL  A+ 
Sbjct:   361 PRESVSAG--ESEVRIQTRYGFRCVEPNLMFVLCRGDWSSPALRVYTAEDVVNELIKART 418

Query:   473 EYLQAAVGISS-EKFAIPKLLDWYLLDFAKDFESLLDWICLQLP----C-ELGKKAIKCL 526
             EYL+A++G+S  +K  IP+ L   L DFA+D  SL++WIC QLP    C +L + A++ L
Sbjct:   419 EYLEASIGVSGRKKIVIPRFLHKRLRDFAEDEGSLIEWICSQLPPAQRCFQLKETAMEGL 478

Query:   527 ERGKNEPLSQFIQVMPYEFSFRYLL 551
              +     L + I+V  +E+ FRYLL
Sbjct:   479 NKKSESQLKKLIEVRSHEYEFRYLL 503

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2171499 AT5G47380 "AT5G47380" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 2.7e-42, Sum P(3) = 2.7e-42
 Identities = 104/336 (30%), Positives = 173/336 (51%)

Query:   228 TISVPDERESGD---DGPNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESN 284
             T+  P +R   D     PN++SED+V+C+S++   +         E    LS   S  SN
Sbjct:   261 TVKSPSQRTLKDHLYQCPNKLSEDMVKCMSSVYFWLCCSAMSADPEK-RILSR--SSTSN 317

Query:   285 EETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFN 344
                    P  I ++   R     + +  +   S D  R S   + +   ++L+ ++    
Sbjct:   318 VII----PKNIMNE--DR-AWSCRSMVEVSWISSDKKRFSQVTYAINNYRLLVEQLERVT 370

Query:   345 LENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEH 404
             +  +    KLAFWINIYN+ +M+A+L  G+P      +AL  K+   +GGH++NA TIE+
Sbjct:   371 INQMEGNAKLAFWINIYNALLMHAYLAYGVPAHSLRRLALFHKSAYNIGGHIINANTIEY 430

Query:   405 --FILRLPYHSKY--TFSKGA---KNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRV 457
               F  + P + ++  T    A   K  E   + MF L+  EPLV FAL  G+ S P ++ 
Sbjct:   431 SIFCFQTPRNGRWLETIISTALRKKPAEDKVKSMFSLDKPEPLVCFALCIGALSDPVLKA 490

Query:   458 YTASEVESELEVAKREYLQAAVGISSEK-FAIPKLLDWYLLDFAKDFESLLDWICLQLPC 516
             YTAS V+ EL+ +KRE+L A V +  +K   +PK+++ +  + +  F+ L+ W+      
Sbjct:   491 YTASNVKEELDASKREFLGANVVVKMQKKVLLPKIIERFTKEASLSFDDLMRWLIDNADE 550

Query:   517 ELGKKAIKCLERGK--NEPLSQFIQVMPYEFSFRYL 550
             +LG+   KC++ GK  N+  SQ ++ +PY   FRY+
Sbjct:   551 KLGESIQKCVQ-GKPNNKKASQVVEWLPYSSKFRYV 585

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089220 AT3G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 9.5e-40, Sum P(3) = 9.5e-40
 Identities = 91/266 (34%), Positives = 149/266 (56%)

Query:   291 DPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNLENLNH 350
             DPY +  +    +IG Y     +   S+   +   +   +++ + L+ ++A  N  +L+ 
Sbjct:   309 DPYRVRGKLSWAEIGNYSLASEVSWMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSC 368

Query:   351 QEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRL- 409
              EKLAFWIN+YN+ +M+A+L  G+P+S   + +LMQKA   VGGH   A T+E+ IL++ 
Sbjct:   369 NEKLAFWINLYNALIMHAYLAYGVPKSDLKLFSLMQKAAYTVGGHSYTAATMEYVILKMK 428

Query:   410 -PYHSKYTFSKGA--KNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVESE 466
              P H        A  K      +    ++  EPL+ FALSCG +SSPAVR+Y+A  V+ E
Sbjct:   429 PPMHRPQIALLLAIHKMKVSEEQRRASIDTHEPLLGFALSCGMYSSPAVRIYSAKGVKEE 488

Query:   467 LEVAKREYLQAAVGISSE-KFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAIKC 525
             +  A+R+++QA+VG+SS+ K  +PK+L  Y     +D  +L  WI   LP        +C
Sbjct:   489 MLEAQRDFIQASVGLSSKGKLLLPKMLHCYAKSLVED-SNLGVWISRYLPPHQAAFVEQC 547

Query:   526 LERGKNEPL-SQFIQVMPYEFSFRYL 550
             + + +   L S+   ++P++  FRYL
Sbjct:   548 ISQRRQSLLASRNCGILPFDSRFRYL 573

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2015666 AT1G16750 "AT1G16750" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 99/277 (35%), Positives = 150/277 (54%)

Query:   286 ETEFQDPYGICSQFGKRDIGPYKHLFAIEADSIDTNRTSSSMFLVRRLKILLGKIASFNL 345
             E++  D Y +  +    DIG Y+    + + S++  R   +   + R + L+ ++A  N 
Sbjct:   254 ESDVFDLYTVQGKLSWADIGSYRSATEVASMSVEEKRLGYASDELWRFRNLVERLARVNP 313

Query:   346 ENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHF 405
               L+H EKLAFWINIYN+ +M+A+L  G+P++   + +LMQKA   VGGH  NA TIE+ 
Sbjct:   314 AELSHNEKLAFWINIYNAMIMHAYLAYGVPKTDLKLFSLMQKAAYTVGGHSYNAATIEYM 373

Query:   406 ILRL--PYHSKY-----TFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVY 458
              L++  P H        +  K   +DE       G+   EPLV+FALSCG  SSPAVR+Y
Sbjct:   374 TLKMSPPLHRPQIALLLSILKLKVSDEQRQA---GISTPEPLVSFALSCGMHSSPAVRIY 430

Query:   459 TASEVESELEVAKREYLQAAVGISSE-KFAIPKLLDWYLLDFAKDFESLLDWICLQLPCE 517
             +A  V  ELE A+++Y+QA+VG+S   K  +P++L  +      D +  L WI   LP  
Sbjct:   431 SAENVGEELEEAQKDYIQASVGVSPRGKLIVPQMLHCFAKKSVDDCKVAL-WISRHLPPR 489

Query:   518 LGKKAIKCLER----GKNEPLSQFIQVMPYEFSFRYL 550
                   +C+ R    G     S    ++P++  FRYL
Sbjct:   490 QAAFVEQCIHRRQWWGFLGSSSSKCGIVPFDSRFRYL 526

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2049008 AT2G23700 "AT2G23700" [Arabidopsis thaliana (taxid:3702)]

 Score = 403 (146.9 bits), Expect = 7.0e-37, P = 7.0e-37
 Identities = 110/328 (33%), Positives = 170/328 (51%)

Query:   242 PNRISEDIVRCLSTILLRMSSGKRKGTSENLHFLSTLASEESNEETEFQDPYGICS-QFG 300
             PN++SE++++C S I  +++       S N  F S  +S  S  E   QD Y + S  F 
Sbjct:   386 PNKLSEEMIKCASAIYSKLADPP----SINHGFSSPSSSPSSTSEFSPQDQYDMWSPSFR 441

Query:   301 KRDI--------GPYKHLFAIEADSIDTNRTSSSMFLVRR-LKILLGKIASFNLENLNHQ 351
             K           GPY  +  IE   I  NR    + L+ R   +LL ++ S +   L HQ
Sbjct:   442 KNSSFDDQFEFSGPYSSM--IEVSHIHRNRKRRDLDLMNRNFSLLLKQLESVDPRKLTHQ 499

Query:   352 EKLAFWINIYNSCMMNAFLENGIPESPEMVVALMQKATIRVGGHLLNAITIEHFILRL-- 409
             EKLAFWIN++N+ +M+ FL NGIP++      L+ K   ++GG +++   I+ +ILR+  
Sbjct:   500 EKLAFWINVHNALVMHTFLANGIPQNNGKRFLLLSKPAYKIGGRMVSLEAIQSYILRIKM 559

Query:   410 PYHSKYTF-----SKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVRVYTASEVE 464
             P   ++        K    DE      + LE SEPL+ FAL  G+ S PA+RV+T   + 
Sbjct:   560 PRPGQWLKLLLIPKKFRTGDEHQE---YSLEHSEPLLYFALCSGNHSDPAIRVFTPKGIY 616

Query:   465 SELEVAKREYLQAAVGISSE-KFAIPKLLDWYLLDFAKDFESLLDWICLQLPCELGKKAI 523
              ELE AK EY++A  G+  + K  +PK+++ +  D      +L++ I   LP E  KK I
Sbjct:   617 QELETAKEEYIRATFGVKKDQKLVLPKIIESFSKDSGLGQAALMEMIQECLP-ETMKKTI 675

Query:   524 KCLERGKNEPLSQFIQVMPYEFSFRYLL 551
             K L  G++      ++  P+ F FRYL+
Sbjct:   676 KKLNSGRSR--KSIVEWTPHNFVFRYLI 701

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009854 AT1G43020 "AT1G43020" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 77/245 (31%), Positives = 126/245 (51%)

Query:   318 IDTNRTSSSMFLVRRLKILLGKIASFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPES 377
             +D     S   +++  + L+ K+   +   L  +EKLAFWINI+N+ +M+ ++  GI E 
Sbjct:   200 LDDYNLKSVESMLQNFRSLVQKLEKVDPARLGREEKLAFWINIHNALVMHEYIVYGIGE- 258

Query:   378 PEMVVALMQ-KATIRVGGHLLNAITIEHFILRL-PYHS----KYTFSKGAKNDEMTARFM 431
              +    LM  KA   +GG  +NA  I+  IL + P HS    +  FS    +   + R  
Sbjct:   259 -DTTSTLMNLKAAFNIGGEWVNAYDIQSSILGIRPCHSPSRLRTLFSPAKSSKTSSGRHT 317

Query:   432 FGLELSEPLVTFALSCGSWSSPAVRVYTASEVESELEVAKREYLQAAVGISSE-KFAIPK 490
             + L+ +EPL+ FALS G+ + P VRVYT+  +  EL  A+  Y+Q +VG   E K  +PK
Sbjct:   318 YALDYAEPLLHFALSTGASTDPMVRVYTSEGIFQELRQARDSYIQTSVGFEKETKILLPK 377

Query:   491 LLDWYLLDFAKDFESLLDWI--CLQLPCELGKKAIKCLERGKNEPLSQFIQVMPYEFSFR 548
             ++  Y  D + D   L   +  CL    E  + A++ +   K E   +++     E  FR
Sbjct:   378 IIYNYAKDTSLDMGELFSTVSECLM---ESQRTAMRRIVNKKQERCIRWVHD---ESKFR 431

Query:   549 YLLHA 553
             Y++H+
Sbjct:   432 YVIHS 436

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	553
pfam04784	112	pfam04784, DUF547, Protein of unknown function, DU	2e-40
pfam14389	88	pfam14389, Lzipper-MIP1, Leucine-zipper of ternary	1e-29
cd00864	152	cd00864, PI3Ka, Phosphoinositide 3-kinase family,	0.003

>gnl|CDD|218263 pfam04784, DUF547, Protein of unknown function, DUF547

 Score =  141 bits (359), Expect = 2e-40
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 28/137 (20%)

Query: 342 SFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESP-EMVVALMQKATIRVGGHLLNAI 400
             + E+L+ +E+LAFWIN+YN+  ++  L+N    S  ++      KA   VGG  L+  
Sbjct: 1   RVDPESLSREEQLAFWINLYNALTIHLILDNYPVPSIRDIGFGPWNKAFYTVGGQALSLD 60

Query: 401 TIEHFILRLPYHSKYTFSKGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVR--VY 458
            IEH ILR  +                          +P + FAL+CGS S P +R   Y
Sbjct: 61  DIEHGILRGNW-------------------------PDPRIHFALNCGSISCPPLRPEAY 95

Query: 459 TASEVESELEVAKREYL 475
           TA  ++ +LE A RE++
Sbjct: 96  TAENLDEQLEEAAREFI 112

Family of uncharacterized proteins from C. elegans and A. thaliana. Length = 112

>gnl|CDD|206557 pfam14389, Lzipper-MIP1, Leucine-zipper of ternary complex factor MIP1

 Score =  111 bits (279), Expect = 1e-29
 Identities = 38/87 (43%), Positives = 61/87 (70%)

Query: 21  SRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELL 80
            ++ ++ +R+ AL+Q+V KL+K+L+ EE++  ALE+A  R  G+L  LP  LP   KELL
Sbjct: 1   KKKKASQERRSALEQEVAKLQKQLQQEEDLREALEKALGRSSGSLLPLPSSLPKKAKELL 60

Query: 81  AEVAVLEEEVVRLEEQVVHFRQDLYRE 107
           AE+A+LE EV  LE+Q++   + L++E
Sbjct: 61  AEIALLEAEVSNLEQQLLSLYRQLFQE 87

This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,. Length = 88

>gnl|CDD|238440 cd00864, PI3Ka, Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 26/109 (23%)

Query: 456 RVYTASEVESELEVAKREYLQAAVGISSEKFAIPKLL---DWYLLDFAKDFESLLDW--- 509
              T +E E EL    R YL       +   A+PKLL   +W   +   +   LL W   
Sbjct: 15  PFSTLTEEEKELLWKFRYYLL------NVPKALPKLLKSVNWNDDEEVSELYQLLKWWAP 68

Query: 510 ----ICLQL------PCELGKKAIKCLERGKNEPLS----QFIQVMPYE 544
                 L+L         + + A++ LE   ++ L     Q +Q + YE
Sbjct: 69  LSPEDALELLSPKYPDPVVRQYAVRVLESASDDELLLYLPQLVQALKYE 117

Its role is unclear, but it has been suggested to be involved in substrate presentation. Phosphoinositide 3-kinases play an important role in a variety of fundamental cellular processes and can be divided into three main classes, defined by their substrate specificity and domain architecture. Length = 152

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	553
PF04784	117	DUF547: Protein of unknown function, DUF547; Inter	100.0
PF14389	88	Lzipper-MIP1: Leucine-zipper of ternary complex fa	99.93
PF07106	169	TBPIP: Tat binding protein 1(TBP-1)-interacting pr	87.34
cd00089	72	HR1 Protein kinase C-related kinase homology regio	86.43

>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=7.3e-39  Score=287.90  Aligned_cols=112  Identities=41%  Similarity=0.679  Sum_probs=105.9

Q ss_pred             ccCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCChHHH---HhhccceEEEECCEeeeHHHHHhhhccCCCCCCcccc
Q 037803          342 SFNLENLNHQEKLAFWINIYNSCMMNAFLENGIPESPEMV---VALMQKATIRVGGHLLNAITIEHFILRLPYHSKYTFS  418 (553)
Q Consensus       342 ~Vdl~~Ls~~EKLAFwINiYNalvmHa~L~~G~P~s~~~~---~~~~~ka~y~IGG~~~Sl~dIEh~ILR~~~~~~~~~~  418 (553)
                      +||++.|+++||+|||||+||+|+||+++++|+|.+..++   ..||.+..|+|||+.+||+||||+|||++..      
T Consensus         1 ~v~~~~l~~~e~lAFwIN~yNal~~h~~l~~~~~~s~~~~~~~~~~~~~~~y~Igg~~~SL~dIe~~ILR~~~~------   74 (117)
T PF04784_consen    1 RVDLSSLSREEKLAFWINLYNALVLHAILENGPPKSILDRKLGGSFFSKVRYNIGGQRFSLDDIEHGILRGNRP------   74 (117)
T ss_pred             CcChHHCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHhhcccccccceEEEECCEEecHHHHHHhhccCCCC------
Confidence            5899999999999999999999999999999999899887   6899999999999999999999999998532      


Q ss_pred             CCCCChhhhHhHhcCCCCCCCeeeeeeccCCCCCCCCc--ccChhhHHHHHHHHHHHHH
Q 037803          419 KGAKNDEMTARFMFGLELSEPLVTFALSCGSWSSPAVR--VYTASEVESELEVAKREYL  475 (553)
Q Consensus       419 ~~~~~~~~d~r~~~~L~~~ePrIhFAL~cGs~SsP~lr--vYta~~l~~qLe~a~~efl  475 (553)
                                      .++||||||||+||++|||+||  +|||++|++||++|+++||
T Consensus        75 ----------------~~~DprihFaL~cgs~s~P~lr~~~yt~~~l~~qL~~a~~~fi  117 (117)
T PF04784_consen   75 ----------------PWPDPRIHFALNCGSKSCPPLRREAYTAENLDEQLEEAAREFI  117 (117)
T ss_pred             ----------------CCCCCceeeeeecCCCCChhhhhhccCHHHHHHHHHHHHHhhC
Confidence                            1779999999999999999999  9999999999999999997

>PF14389 Lzipper-MIP1: Leucine-zipper of ternary complex factor MIP1

Probab=99.93  E-value=2e-25  Score=191.24  Aligned_cols=88  Identities=41%  Similarity=0.715  Sum_probs=85.3

Q ss_pred             hhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037803           21 SRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHF  100 (553)
Q Consensus        21 ~r~~~~~~~r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~~~~~~~~~~~~~lp~~~~eLl~EIA~lE~eV~~LE~~v~~l  100 (553)
                      |||.+.+++|.+|||||.+||++|++|+++|+|||+|++++.++++++|.+||++|++||+|||+||+||++||+||++|
T Consensus         1 ~rk~~~~~~r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~~~~~~~~~~~~~lp~~~keLL~EIA~lE~eV~~LE~~v~~L   80 (88)
T PF14389_consen    1 KRKQALHERRSALEQEVAELQKQLQEEQDLRRALEKALGRSSGSLPSSPSSLPKKAKELLEEIALLEAEVAKLEQKVLSL   80 (88)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCccccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhh
Q 037803          101 RQDLYREA  108 (553)
Q Consensus       101 ~~~L~qe~  108 (553)
                      +++||+|+
T Consensus        81 ~~~l~~q~   88 (88)
T PF14389_consen   81 YRQLFQQR   88 (88)
T ss_pred             HHHHHhcC
Confidence            99999873

>PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences

Probab=87.34  E-value=2.5  Score=40.31  Aligned_cols=67  Identities=25%  Similarity=0.427  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037803           27 AQRKYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQ  102 (553)
Q Consensus        27 ~~~r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~~~~~~~~~~~~~lp~~~~eLl~EIA~lE~eV~~LE~~v~~l~~  102 (553)
                      .+--.+|..++.+|+.+|+....-...|+.-|..-.+.        | .+.+|..+|+.|+.|+..||.++..|+.
T Consensus        71 ~eel~~ld~ei~~L~~el~~l~~~~k~l~~eL~~L~~~--------~-t~~el~~~i~~l~~e~~~l~~kL~~l~~  137 (169)
T PF07106_consen   71 PEELAELDAEIKELREELAELKKEVKSLEAELASLSSE--------P-TNEELREEIEELEEEIEELEEKLEKLRS  137 (169)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44457899999999999999888888888777421111        1 3588999999999999999999999664

TBP-1 has been demonstrated to interact with the human immunodeficiency virus type 1 (HIV-1) viral protein Tat, then modulate the essential replication process of HIV. In addition, TBP-1 has been shown to be a component of the 26S proteasome, a basic multiprotein complex that degrades ubiquitinated proteins in an ATP-dependent fashion. Human TBPIP interacts with human TBP-1 then modulates the inhibitory action of human TBP-1 on HIV-Tat-mediated transactivation [].

>cd00089 HR1 Protein kinase C-related kinase homology region 1 domain; also known as the ACC (antiparallel coiled-coil) finger domain or Rho-binding domain

Probab=86.43  E-value=2.7  Score=34.57  Aligned_cols=64  Identities=19%  Similarity=0.224  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037803           30 KYALQQDVDKLKKKLRHEENVHRALERAFSRPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVHFRQDLYR  106 (553)
Q Consensus        30 r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~~~~~~~~~~~~~lp~~~~eLl~EIA~lE~eV~~LE~~v~~l~~~L~q  106 (553)
                      +.-+++-+..|+.+|+.|..++..+|+.+.-    +...+.      +   .-++.+|.+...-.+++..||.+|.+
T Consensus         4 ~~~~~~~l~~L~~~l~~E~~~r~Gaenm~~~----~~~~~~------~---~~~~~~~~~l~es~~ki~~Lr~~L~k   67 (72)
T cd00089           4 RSKLQSRLERLEKELSIELKVKEGAENLLRL----YSDEKK------K---KLLAEAEQMLRESKQKLELLKMQLEK   67 (72)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCC------c---cCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4468999999999999999999999998741    111111      0   34567778888888888888888854

Found in vertebrate PRK1 and yeast PKC1 protein kinases C; those found in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 repeats often occur in tandem repeat arrangments, seperated by a short linker region.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	553
2ke4_A	98	CDC42-interacting protein 4; CIP4, TC10, coiled-co	92.54
3o0z_A	168	RHO-associated protein kinase 1; coiled-coil, tran	81.53

>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}

Probab=92.54  E-value=0.21  Score=42.89  Aligned_cols=74  Identities=24%  Similarity=0.322  Sum_probs=56.9

Q ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 037803           24 ASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFS----RPLGALPRLPPYLPPSTKELLAEVAVLEEEVVRLEEQVVH   99 (553)
Q Consensus        24 ~~~~~~r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~----~~~~~~~~~~~~lp~~~~eLl~EIA~lE~eV~~LE~~v~~   99 (553)
                      -+..+||..|++.|.+|++.+++|..=|.+|++..+    +|..   ..|..+-.+..|.-.+|..|+.|+-+++..+..
T Consensus        11 LPpeqRkkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~---GD~~s~~~~L~e~~~kid~L~~el~K~q~~L~e   87 (98)
T 2ke4_A           11 LPPEQQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQM---GDPASLEPQIAETLSNIERLKLEVQKYEAWLAE   87 (98)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGG---CCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456788899999999999999999999999998875    1211   123445556667777788888888888887777


Q ss_pred             H
Q 037803          100 F  100 (553)
Q Consensus       100 l  100 (553)
                      +
T Consensus        88 ~   88 (98)
T 2ke4_A           88 A   88 (98)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}

Probab=81.53  E-value=7.4  Score=36.36  Aligned_cols=88  Identities=18%  Similarity=0.128  Sum_probs=52.9

Q ss_pred             hhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCC-CCC------CCCCChhHHHHHHHHHHHHHHH
Q 037803           21 SRRASNAQRKYALQQDVDKLKKKLRHEENVHRALERAFS---RPLGAL-PRL------PPYLPPSTKELLAEVAVLEEEV   90 (553)
Q Consensus        21 ~r~~~~~~~r~~LeqeV~~Lq~~L~~E~~~r~aLe~al~---~~~~~~-~~~------~~~lp~~~~eLl~EIA~lE~eV   90 (553)
                      .+-......|.+||+||..||.+|..|+.-|.--..-..   .-...+ ..+      -..+-...+.|-.-|..||-|-
T Consensus        55 ~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~  134 (168)
T 3o0z_A           55 ERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEK  134 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555667899999999999999999965543332111   000000 000      0011123456666777777777


Q ss_pred             HHHH----HHHHHHHHHHHhhh
Q 037803           91 VRLE----EQVVHFRQDLYREA  108 (553)
Q Consensus        91 ~~LE----~~v~~l~~~L~qe~  108 (553)
                      ..+|    =++..++..+-||.
T Consensus       135 a~~eid~~~eLKalQ~~~eqE~  156 (168)
T 3o0z_A          135 NNLEIDLNYKLKSLQQRLEQEV  156 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHHHHHHH
Confidence            7777    56777777777773

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00