Citrus Sinensis ID: 037939

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MGSLLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQYEYIPYRS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccEEEEEEEEcccccccccEEEEEEEccccEEcccEEEEEEEEEcccccccccccccccccccEEEccEEEEEEEccccccccccccEEEEEEccccEEEEEccccccccccccccEEEEEEcccEEEEEEcccccEEEEccccEEEEEEEccccccccccccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccEEEEEEEEEccHHHHcccEEEEEEcccccEEcccEEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEccccccccccccEEEEEEccccEEEEEcccccccccccccEEEEEEEcccEEEEEccccccEEEEEcccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccEEcccccccccccccccc
Coil and Loop (DISEMBL)
MGSLLSLILTILSLASlsetqgvkstRVLDLLIRDYtfksldnhaiktgnlhnvhlpanlsgikvDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYanydlsgyqlvsPVLGILAYnsvtdvnfnnrFELQilangkpitidfrnttrvtnisgikpfcanfqrdgkvtltnqvspyvcvarkhghfglvtkypppsegpeqVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMvghiraptasvtrtvptieqyeyipyrs
Flexible Loop (DISEMBL)
MGSLLSLILTILSLAslsetqgvkstrvLDLLIRDYTFKSLDNHAIKtgnlhnvhlpanlsgikvDMVRFRCGSLRRYGARVKEFHLGigvivqpcVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQIlangkpitidfrNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHfglvtkypppsegpEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEeealqvsmvghiraptasvtrtvptieqyeyipyrs
Low Complexity Region (SEG)
MGsllsliltilslaslsETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGvivqpcvervvvvRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKKISRWKLavgttvgaavgafllglllvaMFVKVKKKarmeelerrayeeeaLQVSMVGHIRAPTASVTRTVPTIEQYEYIPYRS
Disordered region (IsUnstruct)
***LLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKY***********KKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARM******AYEEEALQVSMVGHIRAPTASVTRTVPTIEQYEYI****
Disordered Region (DISOPRED)
**SLLSLILTILSLA**************DLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDF**********GI*PFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLV********************KLAVGTTVGAAVGAFLLGLLLVAMFVKVKKK*************EALQVSMVGHIRAPTASVTRTVPTIEQ********
Disordered Region (DISEMBL)
MGSLLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPP*********KKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQYEYIPYRS
Disordered Region (DISPRO)
*GSLLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPP**********ISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQYEY*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSLLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVxxxxxxxxxxxxxxxxxxxxxQVSMVGHIRAPTASVTRTVPTIEQYEYIPYRS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
255537223	313	conserved hypothetical protein [Ricinus	0.980	0.968	0.705	1e-113
224058625	294	predicted protein [Populus trichocarpa]	0.938	0.986	0.709	1e-112
224071674	310	predicted protein [Populus trichocarpa]	0.912	0.909	0.672	1e-111
225426728	305	PREDICTED: uncharacterized protein LOC10	0.964	0.977	0.661	1e-103
356515337	314	PREDICTED: uncharacterized protein LOC10	0.974	0.958	0.639	1e-101
356510363	312	PREDICTED: uncharacterized protein LOC10	0.970	0.961	0.620	1e-99
449452506	290	PREDICTED: uncharacterized protein LOC10	0.906	0.965	0.625	2e-97
357456169	325	hypothetical protein MTR_3g010800 [Medic	0.983	0.935	0.591	2e-88
297803830	342	hypothetical protein ARALYDRAFT_914316 [	0.922	0.833	0.492	2e-79
15234376	327	uncharacterized protein [Arabidopsis tha	0.964	0.911	0.481	2e-76

>gi|255537223|ref|XP_002509678.1| conserved hypothetical protein [Ricinus communis] gi|223549577|gb|EEF51065.1| conserved hypothetical protein [Ricinus communis]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/316 (70%), Positives = 259/316 (81%), Gaps = 13/316 (4%)

Query: 1   MGSLLSLILTIL-SLASLS-ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPA 58
           MGSLL   L IL SL S+S E +G+KS RVLDL+IRDYTFKS D H ++TG +H V LPA
Sbjct: 1   MGSLLFFSLVILCSLTSISIEAEGIKSPRVLDLIIRDYTFKSYDLH-LRTGKIHTVQLPA 59

Query: 59  NLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYAN 118
           N SGIKVD  RFRCGSLRRYGA+VKEFHLGIGVIV PCVERV+V+RQ LG+NWSSI+Y+N
Sbjct: 60  NFSGIKVDTARFRCGSLRRYGAQVKEFHLGIGVIVHPCVERVMVIRQKLGHNWSSIFYSN 119

Query: 119 YDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNI----SG 174
           YDLSGYQLVSP+LG+LAYN  +DVNF+N FEL I A  KPI IDF N T  TN+    SG
Sbjct: 120 YDLSGYQLVSPILGLLAYNGGSDVNFSNPFELGIHAGEKPIIIDFSNAT--TNLENPSSG 177

Query: 175 IKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPP--PSEGPEQVRKKISRWKL 232
           I P CA+F+ DGKVTL N  S +VCVA +HGH+GLV K PP  P  G ++++KKIS WK+
Sbjct: 178 INPLCASFENDGKVTLKNPASLHVCVATRHGHYGLVIKSPPLLPPPG-QEIKKKISPWKV 236

Query: 233 AVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASV 292
            VG+TVG+A+  FLLGLLLVAMFVKVKKKARMEE+ERRAYEEEALQVSMVGH+RAPTA+V
Sbjct: 237 IVGSTVGSALAVFLLGLLLVAMFVKVKKKARMEEMERRAYEEEALQVSMVGHVRAPTAAV 296

Query: 293 TRTVPTIEQYEYIPYR 308
           TRT+PTIE +EY PYR
Sbjct: 297 TRTMPTIE-HEYRPYR 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058625|ref|XP_002299572.1| predicted protein [Populus trichocarpa] gi|222846830|gb|EEE84377.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/293 (70%), Positives = 242/293 (82%), Gaps = 3/293 (1%)

Query: 11  ILSLASL-SETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVR 69
           +LSLA + +E QG+KS R+LDLLIRDYT KS   H  KTG +H V LPAN SGIKVD VR
Sbjct: 2   LLSLALVRTEAQGIKSARLLDLLIRDYTLKSSGVH-FKTGMVHTVDLPANFSGIKVDTVR 60

Query: 70  FRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSP 129
           FRCGSLRRYGA+VKEFHLGIGV VQPCVER++V+RQNL  NWSSIYYANYDLSGYQ+VSP
Sbjct: 61  FRCGSLRRYGAQVKEFHLGIGVTVQPCVERLLVIRQNLDLNWSSIYYANYDLSGYQIVSP 120

Query: 130 VLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVT 189
           +LG+LAYN  +DVN +N FE+ I A GKPITIDF N +   N+SGI+P CA+F+ DGKVT
Sbjct: 121 ILGLLAYNFGSDVNVSNSFEIGIHAGGKPITIDFINVSTTANVSGIRPLCASFENDGKVT 180

Query: 190 LTNQVSPYVCVARKHGHFGLVTKYPP-PSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLG 248
           L N  SP+VCVA +HGH+GLV K PP P    + ++KKIS WK+ VG++VG A+G  LLG
Sbjct: 181 LRNPTSPFVCVATRHGHYGLVIKSPPAPPPSMQMMKKKISLWKVVVGSSVGTAIGVILLG 240

Query: 249 LLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQ 301
           LLLVAMFVKVKKKARMEE+ERRAYEEEALQVSMVGH+RAPTA+VTRTVP IE 
Sbjct: 241 LLLVAMFVKVKKKARMEEMERRAYEEEALQVSMVGHVRAPTATVTRTVPIIEH 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071674|ref|XP_002303554.1| predicted protein [Populus trichocarpa] gi|222840986|gb|EEE78533.1| predicted protein [Populus trichocarpa]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 229/284 (80%), Gaps = 2/284 (0%)

Query: 19  ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRY 78
           E QG+KS R+LDLLIRDYT KS      KTG +H VHLPAN SGIKVD VRFRCGSLRRY
Sbjct: 21  EAQGIKSARLLDLLIRDYTLKS-SGVRFKTGMVHTVHLPANFSGIKVDAVRFRCGSLRRY 79

Query: 79  GARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNS 138
           GA+VKEFHLGIGV +QPC ER+VV+RQNL  NWS IYYANYDLSGYQLVSP+LG+LAYN 
Sbjct: 80  GAQVKEFHLGIGVTLQPCAERLVVIRQNLDLNWSPIYYANYDLSGYQLVSPILGLLAYNF 139

Query: 139 VTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYV 198
            +DVN ++ FE+ I A  KPITIDF N +   N+SG++P CA+F+ DG+V +    S +V
Sbjct: 140 GSDVNVSDSFEIGIHAGEKPITIDFSNASTTANVSGVRPLCASFENDGRVIIKVPESLFV 199

Query: 199 CVARKHGHFGLVTKYPP-PSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVK 257
           CVA++HGH+GLV K PP P    + +++KIS WK+ VG++VG A+G FLLG+L VAMFV+
Sbjct: 200 CVAKRHGHYGLVIKSPPAPPPSMQMIKRKISLWKVVVGSSVGTALGVFLLGMLFVAMFVQ 259

Query: 258 VKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQ 301
           VKKKARMEE+ERRAYEEEALQVSMVGH+RAPTA+VTRT P IE 
Sbjct: 260 VKKKARMEEMERRAYEEEALQVSMVGHVRAPTATVTRTTPIIEH 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426728|ref|XP_002275633.1| PREDICTED: uncharacterized protein LOC100261490 [Vitis vinifera] gi|297742625|emb|CBI34774.3| unnamed protein product [Vitis vinifera]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/310 (66%), Positives = 240/310 (77%), Gaps = 12/310 (3%)

Query: 1   MGSLLSLILTILSLASL----SETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHL 56
           MGSL  LIL +LSL S     +E QG+KS R+LDL++RDYT +S +  + +TG LH V L
Sbjct: 1   MGSLFPLILIVLSLGSSALMKTEAQGIKSARLLDLVLRDYTIRSYNTRS-RTGMLHTVDL 59

Query: 57  PANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYY 116
           PAN SGI+VD VRFRCGSLRRYGA+VKEF LGIGV V PCVERV+V+RQNLG N SSIY 
Sbjct: 60  PANFSGIRVDTVRFRCGSLRRYGAQVKEFQLGIGVKVSPCVERVIVIRQNLGNNLSSIYS 119

Query: 117 ANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIK 176
            +Y+LSGYQLVSPVLG+LAYN+  + N+ N FEL ILA   PI +DF NTT V    G  
Sbjct: 120 DSYNLSGYQLVSPVLGLLAYNAGDNRNYTNPFELGILAGKTPIKVDFSNTTLV-QTPGTV 178

Query: 177 PFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKKISRWKLAVGT 236
           P CA F+ DGKVTLT Q SPYVCV  KHGHFGLV + P   EG     K++S WK+AVG 
Sbjct: 179 PLCATFEHDGKVTLTPQTSPYVCVTSKHGHFGLVMESPELQEG-----KRMSWWKVAVGA 233

Query: 237 TVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTV 296
           ++GA +GAFLLGLLLVAMFVKVKK++RMEELERRAYEEEALQVSMVGH+RAP A+VTRT+
Sbjct: 234 SIGATLGAFLLGLLLVAMFVKVKKRSRMEELERRAYEEEALQVSMVGHVRAPIAAVTRTM 293

Query: 297 PTIEQYEYIP 306
           P+I Q EY P
Sbjct: 294 PSI-QDEYTP 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515337|ref|XP_003526357.1| PREDICTED: uncharacterized protein LOC100807935 [Glycine max]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/316 (63%), Positives = 245/316 (77%), Gaps = 15/316 (4%)

Query: 1   MGSLLSLILTILSLASL----SETQ-GVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVH 55
           MGS   LIL I S        S+ Q GVKS  VLDL+IRD+TFK+LD +  KT    +V 
Sbjct: 1   MGSAFGLILMIFSWVLFTFPGSDAQDGVKSAHVLDLIIRDHTFKALDKN-FKTAIPQSVD 59

Query: 56  LPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIY 115
           LP+NLSGI VD VRFRCGSLRRYGA +KEFHLG GV V PC+ERV+++RQN+GYNWSSIY
Sbjct: 60  LPSNLSGIGVDAVRFRCGSLRRYGAHLKEFHLGTGVTVHPCIERVMLIRQNMGYNWSSIY 119

Query: 116 YANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGI 175
           YANYDLSGYQLVSP++G+LAYN+  D N +N F+L I+A  KP+TIDF N TR+    GI
Sbjct: 120 YANYDLSGYQLVSPIVGLLAYNADEDANSSNPFQLGIVAGEKPMTIDFTNATRMNQEGGI 179

Query: 176 KPFCANFQRDGKVTLT---NQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKK-ISRWK 231
           KP CA+F+ DG++TL    N   P VCVA++HGHFGLV +Y P    P+Q R K +SRWK
Sbjct: 180 KPLCASFEGDGRMTLAKAPNPSRPLVCVAKRHGHFGLVVEYSP----PDQFRNKPLSRWK 235

Query: 232 LAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTAS 291
           +AVG+T+GAA+GAFLLGLLLVAM V+VKK++RM E+ERRAYEEEALQVSMVGH+RAPTA 
Sbjct: 236 VAVGSTIGAALGAFLLGLLLVAMLVRVKKRSRMVEMERRAYEEEALQVSMVGHVRAPTAL 295

Query: 292 VTRTVPTIEQYEYIPY 307
            TRT P IE +EY+P+
Sbjct: 296 GTRTTPIIE-HEYMPH 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510363|ref|XP_003523908.1| PREDICTED: uncharacterized protein LOC100787044 [Glycine max]

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 196/316 (62%), Positives = 246/316 (77%), Gaps = 16/316 (5%)

Query: 1   MGSLLSLILTILSLASLS-----ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVH 55
           MGS+  LIL + S  S +       +GVKS  VLDL+IRD+TFK+LD +  +T    +V 
Sbjct: 1   MGSVFGLILMVFSWVSFTFPGSNAQEGVKSAHVLDLIIRDHTFKALDKN-FRTAIPQSVS 59

Query: 56  LPANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIY 115
           LPANLSGI +D VRFRCGSLRRYGA +KEFHLG GV V PC+ERV+++RQN+GYNWSSIY
Sbjct: 60  LPANLSGIGIDAVRFRCGSLRRYGAHLKEFHLGTGVTVHPCIERVMLIRQNMGYNWSSIY 119

Query: 116 YANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGI 175
           YANYDLSGYQLVSP++G+LAYN+  D   +N F+L I+A   P+TIDF N T++ N  G+
Sbjct: 120 YANYDLSGYQLVSPIVGLLAYNADEDAKSSNPFQLGIVAGETPMTIDFTNATKM-NQDGV 178

Query: 176 KPFCANFQRDGKVTLT---NQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKK-ISRWK 231
           KP CA+F+ DG++TL    N  +P VCVA++HGHFGLV +Y P    P+Q R K +SRWK
Sbjct: 179 KPLCASFEGDGRMTLAKAPNPSTPLVCVAKRHGHFGLVVEYSP----PDQFRNKPLSRWK 234

Query: 232 LAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTAS 291
           +AVG+T+GAA+GAFLLGLLLVAM V+VKK++R+ E+ERRAYEEEALQVSMVGH+RAPTA 
Sbjct: 235 VAVGSTIGAALGAFLLGLLLVAMLVRVKKRSRIVEMERRAYEEEALQVSMVGHVRAPTAP 294

Query: 292 VTRTVPTIEQYEYIPY 307
            TRT P IE +EYIP+
Sbjct: 295 GTRTTPVIE-HEYIPH 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452506|ref|XP_004144000.1| PREDICTED: uncharacterized protein LOC101220997 [Cucumis sativus] gi|449525539|ref|XP_004169774.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101220997 [Cucumis sativus]

 Score =  362 bits (928), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 180/288 (62%), Positives = 223/288 (77%), Gaps = 8/288 (2%)

Query: 21  QGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGA 80
             ++S  +LDL IRDYT KSLDN  +KTG LH+V LP N SGI V   RFRCGSLRRYGA
Sbjct: 4   HNLQSPHLLDLYIRDYTLKSLDN-TVKTGTLHSVPLPENFSGIDVATARFRCGSLRRYGA 62

Query: 81  RVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVT 140
            VKEFH+G+GV + PC ER+V++RQNLG NWSSIY+ NY L+GYQLVS +LGILAYNS  
Sbjct: 63  SVKEFHVGVGVSLNPCAERIVIIRQNLGSNWSSIYFNNYRLTGYQLVSSILGILAYNSGN 122

Query: 141 DVNFNNR--FELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSPYV 198
           + + ++   FE+ I A  KPITIDFRN+TR+   S  +P CA+F+RDG+VTL  ++SP +
Sbjct: 123 NGSSSSPVPFEVGISAGEKPITIDFRNSTRMGKNSRTRPICASFERDGRVTLAKEISPSI 182

Query: 199 CVARKHGHFGLVTKYPPPSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKV 258
           C   + GHFGLV + P P E    +RKK   WK+A+G+ +GAA+GAFLLGLLLVAMFV+V
Sbjct: 183 CSVLRQGHFGLVVEEPEPVE----LRKKERPWKVAIGSAIGAAIGAFLLGLLLVAMFVRV 238

Query: 259 KKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVPTIEQYEYIP 306
           KK+ RMEELE RAYEEEALQVSMVGH+RAPTA  TRT+P+IE +EY+P
Sbjct: 239 KKRTRMEELEIRAYEEEALQVSMVGHVRAPTAPGTRTMPSIE-HEYLP 285

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456169|ref|XP_003598365.1| hypothetical protein MTR_3g010800 [Medicago truncatula] gi|355487413|gb|AES68616.1| hypothetical protein MTR_3g010800 [Medicago truncatula]

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 190/321 (59%), Positives = 237/321 (73%), Gaps = 17/321 (5%)

Query: 1   MGSLLSLILTILSLASL----SETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHL 56
           M S  +LIL   SL SL    S  Q +KS  VLDLLIRD+TFKSLD    KTG   +V L
Sbjct: 1   MESFYTLILMTFSLLSLEFHGSYAQNIKSVHVLDLLIRDHTFKSLDKD-FKTGIPQSVKL 59

Query: 57  PANLSGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYN--WSSI 114
           P+NLSGIKVD VRFRCGSL RYGA++KEFHLGIGV + PC+ERV+++RQ++ YN  WSSI
Sbjct: 60  PSNLSGIKVDTVRFRCGSLTRYGAKLKEFHLGIGVSIHPCIERVMLIRQSIEYNNNWSSI 119

Query: 115 YYANY-DLSGYQLVSPVLGILAYNSVTDVNFN-NRFELQILANGKPITIDFRNTTRVTNI 172
           YYANY DLS YQLVSP++GILAYN+  D N + N F+L I A  K ITIDF N T   N 
Sbjct: 120 YYANYNDLSKYQLVSPIVGILAYNADEDSNSSSNPFQLGIEAGEKLITIDFNNATNFNNQ 179

Query: 173 S----GIKPFCANFQRDGKVTL--TNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRK- 225
                 +KP C +F+ +GK+TL  T  ++  VCVA+ HGHFGLV +        ++ +K 
Sbjct: 180 EEKGIKVKPLCVSFEGNGKMTLAITKPLATNVCVAKTHGHFGLVVESESLQHQDDEYKKP 239

Query: 226 -KISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGH 284
            ++S+WK+AVG+T+GAA+GAFLLGLL VAM V+VKK++RM ++ERRAYEEEALQVSMVGH
Sbjct: 240 IRLSQWKIAVGSTIGAALGAFLLGLLFVAMVVRVKKRSRMVQMERRAYEEEALQVSMVGH 299

Query: 285 IRAPTASVTRTVPTIEQYEYI 305
           +RAPTA  TRT PT+EQ++YI
Sbjct: 300 VRAPTAPGTRTTPTLEQHDYI 320

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803830|ref|XP_002869799.1| hypothetical protein ARALYDRAFT_914316 [Arabidopsis lyrata subsp. lyrata] gi|297315635|gb|EFH46058.1| hypothetical protein ARALYDRAFT_914316 [Arabidopsis lyrata subsp. lyrata]

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/315 (49%), Positives = 204/315 (64%), Gaps = 30/315 (9%)

Query: 18  SETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRR 77
           SE+Q ++ST +LDL+IRDYT ++   + + TG    +HLP+N SGI +D V+ RCGSLRR
Sbjct: 20  SESQSIQSTHLLDLMIRDYTIRNFKLN-LNTGITQKIHLPSNFSGIDIDTVKLRCGSLRR 78

Query: 78  YGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGY--QLVSPVLGILA 135
           YGA++ EFH+G GV V+PC ERV+++RQNLG NWSSIY   Y+LSGY  QLVSPVLG+LA
Sbjct: 79  YGAKIGEFHIGSGVTVEPCPERVMLIRQNLGLNWSSIYSTGYNLSGYNYQLVSPVLGLLA 138

Query: 136 YNSVTDVNFNNRFELQILANGK-PITIDFRNTTRVTNISGIKP---------FCANFQRD 185
           YN+  D    N +E+ ++   + PI +DF  + + TN +   P          CA F  +
Sbjct: 139 YNANPDGVATNPYEVNVVGTDQNPILVDFL-SNKATNNTSPNPTTTKKNSSVLCACFTSN 197

Query: 186 GKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRK----------------KISR 229
              T + QVSPYVC   + GH+ LV K     +  +                    K+SR
Sbjct: 198 ANTTFSEQVSPYVCKGTRQGHYALVMKTEAQKDDHDGGGGGVVTSSTEMNGGNGGGKLSR 257

Query: 230 WKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPT 289
           WK+AVG+ +G+ +GA LLG+L+VAM VKVKKKA  EE+ERRAYEEEALQVSMVGH+RAPT
Sbjct: 258 WKVAVGSVIGSGIGAILLGMLVVAMLVKVKKKAMREEMERRAYEEEALQVSMVGHVRAPT 317

Query: 290 ASVTRTVPTIEQYEY 304
           A  TRT+P I    Y
Sbjct: 318 APGTRTLPRIADDRY 332

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234376|ref|NP_192932.1| uncharacterized protein [Arabidopsis thaliana] gi|4586100|emb|CAB40936.1| putative protein [Arabidopsis thaliana] gi|7267896|emb|CAB78238.1| putative protein [Arabidopsis thaliana] gi|91805585|gb|ABE65521.1| hypothetical protein At4g11950 [Arabidopsis thaliana] gi|332657673|gb|AEE83073.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/332 (48%), Positives = 214/332 (64%), Gaps = 34/332 (10%)

Query: 1   MGSLLSLILTILSLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANL 60
           MGS+  + + +L     S++Q ++S   LDL+IRDYT ++ + H  KTG +  VHLP+N 
Sbjct: 1   MGSIPFIFIILLFHVHKSKSQTIESAHFLDLMIRDYTIRNFNIH-FKTGAIQKVHLPSNF 59

Query: 61  SGIKVDMVRFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSS-IYYANY 119
           S I +   +FRCGSLRR+GAR+ EFHLG G+ V+PCVERV++VRQNLG+NWSS IY   Y
Sbjct: 60  SSIDIATAKFRCGSLRRHGARIGEFHLGPGLTVEPCVERVILVRQNLGFNWSSYIYSTGY 119

Query: 120 DLSGYQ--LVSPVLGILAYNSVTDVNFNNRFELQILANGK-PITIDF----------RNT 166
           +L+GY+  LVSPVLG+LAYNS  D    N +E+ ++   + PI I F           NT
Sbjct: 120 NLTGYKYRLVSPVLGLLAYNSNPDGVAVNPYEVNVMGTEQNPILIKFLSSEASGSPKPNT 179

Query: 167 TRVTNISGIKPFCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPP----------P 216
            + +++      CA F  +G +T   QVS YVC+  + GH+ LV +             P
Sbjct: 180 KKNSSV-----LCACFTSNGNITFREQVSAYVCLGTRQGHYALVIRAHDSGGGGSTVVTP 234

Query: 217 SEGP---EQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYE 273
           S  P   +    K+SRWK+AVG+ +G+ +GAFLLGLL+VAM VK KKKA  EE+ERRAYE
Sbjct: 235 SSSPALTDGGGGKLSRWKVAVGSVIGSIIGAFLLGLLVVAMVVKGKKKAMREEMERRAYE 294

Query: 274 EEALQVSMVGHIRA-PTASVTRTVPTIEQYEY 304
           EEALQVSMVGH+RA P AS +RT+P  E   Y
Sbjct: 295 EEALQVSMVGHVRANPNASRSRTIPRFENTRY 326

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:4515102709	343	AT1G62981 "AT1G62981" [Arabido	0.673	0.606	0.477	4.2e-57
TAIR|locus:2127248	343	AT4G22900 "AT4G22900" [Arabido	0.621	0.559	0.436	2.1e-38
TAIR|locus:2118026	327	AT4G11950 "AT4G11950" [Arabido	0.624	0.590	0.428	2.4e-37
TAIR|locus:2077803	316	AT3G08600 "AT3G08600" [Arabido	0.873	0.854	0.308	3.3e-24
TAIR|locus:2125003	306	AT4G01140 "AT4G01140" [Arabido	0.851	0.859	0.270	1.4e-14
TAIR|locus:2128509	313	AT4G23720 "AT4G23720" [Arabido	0.611	0.603	0.277	1.1e-13

TAIR|locus:4515102709 AT1G62981 "AT1G62981" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
 Identities = 106/222 (47%), Positives = 146/222 (65%)

Query:    24 KSTRVLDLLIRDYTFKSLDN--HAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGAR 81
             +S+R+LDL++RDYT     N  ++IKTG +  VHLP++ SGIK+D VRFRCGSLRRYGA+
Sbjct:    41 ESSRLLDLILRDYTLNFFKNQHYSIKTGVIRRVHLPSDYSGIKLDAVRFRCGSLRRYGAK 100

Query:    82 VKEFHLGIGXXXXXXXXXXXXXRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTD 141
             ++EF++G+G             RQ+LG  WS IYY NYDLSGY+LVSPVLG+LAYN++ D
Sbjct:   101 IEEFNIGVGAILEPCGERLLVVRQSLGSKWSDIYYKNYDLSGYRLVSPVLGLLAYNALND 160

Query:   142 V----NFNNRFELQIL-ANGK-PITIDFRNTTRVTNISGI---KPFCANFQRDGKVTLTN 192
             V    N ++ +++ +L A  K P  +DF N +  + +      KP CA F+ DGKVTL  
Sbjct:   161 VVLGNNVSSSYQISLLLARTKDPSNVDFGNVSGPSVVERTFLNKPMCATFELDGKVTLAA 220

Query:   193 QVSPYVCVARKHGHFGLVTKYPPPSEG---PEQVRKKISRWK 231
             +V P+VC  + +GHFGLV    P S G    E  ++KI RW+
Sbjct:   221 EVKPFVCAVKTNGHFGLVVTDDPKSNGGGEKEMKKEKIGRWR 262

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2127248 AT4G22900 "AT4G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 89/204 (43%), Positives = 121/204 (59%)

Query:    19 ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRY 78
             ++Q ++ST +LDL+IRDYT ++   +   TG    ++LP+N SGI +D V+ RCGSLRRY
Sbjct:    21 KSQLIQSTHLLDLMIRDYTIRNFKLN-FNTGVTQKIYLPSNFSGIDIDTVKLRCGSLRRY 79

Query:    79 GARVKEFHLGIGXXXXXXXXXXXXXRQNLGYNWSSIYYANYDLSGY--QLVSPVLGILAY 136
             GA++ EFH+G G             RQN G NWSSIY   Y+LSGY  +LVSPVLG+LAY
Sbjct:    80 GAKIGEFHIGSGLTVEPCPERVMLIRQNFGSNWSSIYSTGYNLSGYNYKLVSPVLGLLAY 139

Query:   137 NSVTDVNFNNRFELQILANGK-PITIDFRNTTRVTNISGIKP-------FCANFQRDGKV 188
             N+  D    N +E+ ++   + PI IDF    + TN +   P        CA F  +   
Sbjct:   140 NANPDGVARNPYEVNVVGTDQNPILIDFL-INKATNNTSPNPTKKNSSVLCACFTSNSNT 198

Query:   189 TLTNQVSPYVCVARKHGHFGLVTK 212
             T + QVSPYVC   + GH+ LV K
Sbjct:   199 TFSEQVSPYVCKGTRQGHYALVMK 222

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2118026 AT4G11950 "AT4G11950" [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 87/203 (42%), Positives = 120/203 (59%)

Query:    19 ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRY 78
             ++Q ++S   LDL+IRDYT ++ + H  KTG +  VHLP+N S I +   +FRCGSLRR+
Sbjct:    19 KSQTIESAHFLDLMIRDYTIRNFNIH-FKTGAIQKVHLPSNFSSIDIATAKFRCGSLRRH 77

Query:    79 GARVKEFHLGIGXXXXXXXXXXXXXRQNLGYNWSS-IYYANYDLSGYQ--LVSPVLGILA 135
             GAR+ EFHLG G             RQNLG+NWSS IY   Y+L+GY+  LVSPVLG+LA
Sbjct:    78 GARIGEFHLGPGLTVEPCVERVILVRQNLGFNWSSYIYSTGYNLTGYKYRLVSPVLGLLA 137

Query:   136 YNSVTDVNFNNRFELQILANGK-PITIDFRNTT-----RVTNISGIKPFCANFQRDGKVT 189
             YNS  D    N +E+ ++   + PI I F ++      +          CA F  +G +T
Sbjct:   138 YNSNPDGVAVNPYEVNVMGTEQNPILIKFLSSEASGSPKPNTKKNSSVLCACFTSNGNIT 197

Query:   190 LTNQVSPYVCVARKHGHFGLVTK 212
                QVS YVC+  + GH+ LV +
Sbjct:   198 FREQVSAYVCLGTRQGHYALVIR 220

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2077803 AT3G08600 "AT3G08600" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 90/292 (30%), Positives = 132/292 (45%)

Query:    25 STRVLDLLIRDYTFKSLDNHAIKTGNLHNVH-LPANLSGIKVDMVRFRCGSLRRYGAR-V 82
             S+  LD L++DY+F++L     +TG L+    +P+NL+GIK+  +R R GS R+ G    
Sbjct:    33 SSSSLDALLQDYSFRALLRP--RTGILYEATTVPSNLTGIKLAAMRLRSGSFRKRGVTPF 90

Query:    83 KEFHLGIGXXXXXXXXXXXXXRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDV 142
              EF +  G              QNL  N+S +YY    LSGY  V+PVLG+LAY++  ++
Sbjct:    91 NEFSIPSGVIVKPYVTRLVLVYQNLA-NFSHLYYP---LSGYDYVAPVLGLLAYDA-KNL 145

Query:   143 NFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQVSP-YVCVA 201
             +  N  +L +  +  PI IDF +  R+   S  K  C  F   G+ + ++ + P   C  
Sbjct:   146 SALNLPQLDLRVSNDPIRIDFSDLERIPQGSSAK--CVRFDSKGEASFSDSIQPGNTCET 203

Query:   202 RKHGHFGLVTKY--PPPSEGP---EQVRKKISRWKLXXXXXXXXXXXXXXXXXXXXXMFV 256
                GHF +V K     PS  P   E  +KK S                           V
Sbjct:   204 EHQGHFSVVVKSVASAPSLAPPGIESKKKKKSSDSNSKTWIIVGSVVGGLILLGLLLFLV 263

Query:   257 ----KVKKKXXXXXXXXXXXXXXXLQVSMVGHIRAPTASVTRTVPTIEQYEY 304
                   KK+               L+++ VG  RAPTA+ TRT P +E  EY
Sbjct:   264 LRCRNYKKQEKMREMERAGETGEALRMTQVGETRAPTATTTRTQPMLET-EY 314

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

TAIR|locus:2125003 AT4G01140 "AT4G01140" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 78/288 (27%), Positives = 118/288 (40%)

Query:    29 LDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGARVKEFHLG 88
             LD LIR Y  ++       TG+L++V LP+NLS IK  +V  R     R G       + 
Sbjct:    34 LDDLIRSYAARATTRR--HTGSLYDVSLPSNLSDIKASVVTVRNSIFWRKGTNFSGVLIP 91

Query:    89 IGXXXXXXXXXXXXXRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRF 148
                             ++ G N SS+Y+   D   Y  VSPV+G   Y++ T+ N   + 
Sbjct:    92 PMVKTSPYAKRIAFVFESFGDNSSSVYFRLAD--NYSFVSPVIGFTGYDA-TNTNDLKKL 148

Query:   149 ELQILANGKPITIDFR-NTTRVTNISGIKPFCANFQRDGKV-TLTNQVSPYVCVA-RKHG 205
              L I  + KPI I F  + +R  + S +K  C  F  +G +  ++N +  Y C     HG
Sbjct:   149 NLSIKRD-KPILIKFDPHASR--DRSKVK--CIVFGDNGLLLNISNTIRNYECATTNSHG 203

Query:   206 HFGLVT----KYPPPSEGPEQVRKKISRWKLXXXXXXXXXXXXXXXXXXXXXMFVKVKKK 261
             H+ LV     K  P  E P  VR+  + W +                       VK+ +K
Sbjct:   204 HYALVVLNQEKVKPKHE-PVLVRR--NWWWIVLTGIGVSVIVVVVIIVS-----VKLVRK 255

Query:   262 XXXXXXXXXXXXXXXLQVSMVGHIRAPTASVTRTVPTIEQYEYIPYRS 309
                            +    +G  R P A++ RT P +E +E +P  S
Sbjct:   256 KRLRDMERESEKSETIGNVWIGRSRMPAATMVRTQPCLEYHEDLPSSS 303

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128509 AT4G23720 "AT4G23720" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 61/220 (27%), Positives = 102/220 (46%)

Query:    25 STRVLDLLIRDYTFKSLDNHAIKT-------GNLHNVHLPANLSGIKVDMVRFRCGSLRR 77
             +T +L++ +     +SL+N A+KT       G L+   LP NLSGI+V +VR    SL  
Sbjct:    33 TTSILNVTLPHSLSQSLENFALKTLTTQHHTGALYRAILPENLSGIEVSVVRLTGKSLWN 92

Query:    78 YGARVKEFHLGIGXXXXXXXXXXXXXRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYN 137
              GA+     +                 QNLG NWS+ +Y    + GY+L++ VLG     
Sbjct:    93 SGAKFSNVLIPERSVSVPPARRVVIVYQNLG-NWSNHWYT---VPGYRLITSVLGF---- 144

Query:   138 SVTDVNFNNRFELQILANGKPITIDFRNTTRVTN---ISGIKPFCANFQ---RDGKVT-L 190
              V DV+  +  +  IL    P+ + FR+  +  +   +S ++  C +F+   +D + T +
Sbjct:   145 KVLDVSDQDNVKEIILKMKNPVEVSFRDLPKERDEEMLSRVR--CVSFKAQTKDEEATHI 202

Query:   191 TNQVSPYVCVARKHGHFGLVTKYPPPSEGPEQVRKKISRW 230
             +  V P VC    HG + ++       E  E  +K +  W
Sbjct:   203 SRMVIPGVCYGSSHGDYSVI-------EPLENDKKNVESW 235

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.9226.1 hypothetical protein (294 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
pfam06697	278	pfam06697, DUF1191, Protein of unknown function (D	4e-97

>gnl|CDD|219141 pfam06697, DUF1191, Protein of unknown function (DUF1191)

 Score =  287 bits (736), Expect = 4e-97
 Identities = 125/286 (43%), Positives = 166/286 (58%), Gaps = 15/286 (5%)

Query: 18  SETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRR 77
           ++   ++S  +LD ++RDY F++   H  +TG L+ V LP+NLSGI    VR R GSLRR
Sbjct: 2   TQELNIQSASLLDAMLRDYAFRAFTLH-RRTGVLYRVSLPSNLSGIAASAVRLRSGSLRR 60

Query: 78  YGA-RVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAY 136
           YG  +  EF +  G++V+P  ERVV+VRQNLG NWSS+YY    LSGY+LVSPVLG+LAY
Sbjct: 61  YGVRKFGEFAIPPGLVVEPYAERVVLVRQNLG-NWSSVYY---PLSGYRLVSPVLGLLAY 116

Query: 137 NSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVT-LTNQVS 195
           ++  D    N   L ++A G PI +DF + +           C  F  +G  T  +  V 
Sbjct: 117 DAANDGGLKN--PLNLVAKGNPIRVDFSDASPAPQPGASAVRCVTFDLNGVATHFSAMVP 174

Query: 196 PYVCVARKHGHFGLV----TKYPPPSEGPEQVRKKISRWKLAVGTTVGAAVGAFLLGLLL 251
           P VC   + GH+ LV       P P  G    +     WK+  G   G  VG   L  +L
Sbjct: 175 PNVCATTRQGHYSLVVNSEASKPGPEPGGVSTKGSSWWWKVVGGVVGG--VGLLGLLAVL 232

Query: 252 VAMFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVP 297
           VA  V+ K+K R EE+ERRA E EAL+VSMVG  RAP+A+ TRT P
Sbjct: 233 VARLVRYKRKKRREEMERRAEEGEALRVSMVGRSRAPSATGTRTQP 278

This family contains hypothetical plant proteins of unknown function. Length = 278

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	100.0
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	91.61
KOG3637	1030	consensus Vitronectin receptor, alpha subunit [Ext	88.79
PF07271	279	Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR0	86.05
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	81.19

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=100.00  E-value=1.1e-110  Score=784.96  Aligned_cols=271  Identities=51%  Similarity=0.786  Sum_probs=246.4

Q ss_pred             cccCCCChhHHHHHHHHHHHHhcccCCCccCceEeeeCCCCccCCeEEEEEeecCcccccCc-eeeeeEeCCcceeccce
Q 037939           19 ETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLPANLSGIKVDMVRFRCGSLRRYGA-RVKEFHLGIGVIVQPCV   97 (309)
Q Consensus        19 ~~q~~~~~~~LD~~lqd~A~k~l~~~~~~TG~~y~~~LPsNlSGi~VsavRlRsgSLrr~G~-~~~eF~IP~gv~~~P~v   97 (309)
                      ++|+++++++||++|||||||+|+.+ ||||++|+++||+||||||||+||||||||||||+ +|+||+||||++++||+
T Consensus         3 ~~~~~~~~~~LD~~lqd~A~kal~~~-p~TG~~y~~~LP~nlsGi~vsavRlRsgSLrr~G~~~~~eF~IP~gv~~~P~v   81 (278)
T PF06697_consen    3 QSQQIYSARSLDALLQDYAFKALVLR-PRTGILYNVSLPSNLSGIEVSAVRLRSGSLRRRGVNNFSEFHIPPGVVVQPYV   81 (278)
T ss_pred             cccccCCHHHHHHHHHHHHHHHhccc-cccCceeeeecCCcccceEEEEEEeecCchhhhcccccceeecCCcceecCcc
Confidence            57899999999999999999999644 79999999999999999999999999999999999 89999999999999999


Q ss_pred             eEEEEEEeecCCCccccccccCCCCCCeEeceeeeeeeecCCCCcCCCCceEEEEeeCCCceEEEcCCCccccCCCCCcc
Q 037939           98 ERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKP  177 (309)
Q Consensus        98 ~Rv~lVyqnLG~NwSs~yy~~y~lpGY~lvsPVlGllaYdas~~~~~~n~~el~i~a~~~PI~V~F~~~~~~~~~~~~~~  177 (309)
                      |||+||||||| |||++||   ++|||+|+|||||||||||+| +++.+++||+|.++|+||+|+|+|++..+..+++.+
T Consensus        82 ~Rl~lVyqnlG-NwSs~yy---~lpGY~lvsPVlGllaYdasn-~~~~~~~el~l~a~~~PI~V~F~~~~~~~~~~~~~~  156 (278)
T PF06697_consen   82 ERLVLVYQNLG-NWSSHYY---PLPGYSLVSPVLGLLAYDASN-LSATSLPELSLRASGKPILVDFSNVSPAPQPGMSVP  156 (278)
T ss_pred             eEEEEEEeccC-cccccee---cCCCceEEeeeeeeEEecccc-cccCCcceeeeeccCCcEEEEecCCccCCCcccccc
Confidence            99999999999 9999996   799999999999999999996 556667999999999999999999998754444899


Q ss_pred             eeEEEccCCeEEEEecCCCceeEeeccceeEEEEeCCCCCCC----chhccccccceEEEeecchhHHHHHHHHHHHHHH
Q 037939          178 FCANFQRDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPPSEG----PEQVRKKISRWKLAVGTTVGAAVGAFLLGLLLVA  253 (309)
Q Consensus       178 ~Cv~F~~~G~~~~~~~~~~nvC~~~~~GHfslVV~~~~~~~~----~~~~~~k~~~Wk~ivg~vvGg~~glvlLgll~v~  253 (309)
                      |||+||+||+++|+|++++|||++++||||||||++++++|.    .+..++++++||||+ +++||+++|+||+++++ 
T Consensus       157 ~Cv~F~~~G~~~~~~~~~~nvC~~~~~GHfslVV~~~~~~~~~~~~~~~~~~~~~~W~iv~-g~~~G~~~L~ll~~lv~-  234 (278)
T PF06697_consen  157 KCVTFDLDGSVTFSNMTSPNVCSTSRQGHFSLVVPSPAPPPAPPPPGAPPRKRSWWWKIVV-GVVGGVVLLGLLSLLVA-  234 (278)
T ss_pred             eEEEEcCCCcEEEeccCCCceeeeecCceEEEEEcCCCCCCCCCCcccccCCcceeEEEEE-EehHHHHHHHHHHHHHH-
Confidence            999999999999999999999999999999999998755432    223466766776554 56777888999997665 


Q ss_pred             hhHHHHHHHHHHHHHHhcccccccceeeeccccCcccccccCCc
Q 037939          254 MFVKVKKKARMEELERRAYEEEALQVSMVGHIRAPTASVTRTVP  297 (309)
Q Consensus       254 ~~vr~~rkkr~~eMEr~A~~gE~L~~~~VG~sraPsA~~tRTqP  297 (309)
                      +++|+|||||||||||+||+||+|||+||||||||+|++|||||
T Consensus       235 ~~vr~krk~k~~eMEr~A~~gE~L~~~~VG~sraPsA~~tRT~P  278 (278)
T PF06697_consen  235 MLVRYKRKKKIEEMERRAEEGEALQMSWVGGSRAPSATVTRTQP  278 (278)
T ss_pred             hhhhhhHHHHHHHHHHhhccCceeeeEEEccccCccccccccCC
Confidence            56999999999999999999999999999999999999999999

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=91.61  E-value=0.15  Score=51.78  Aligned_cols=66  Identities=17%  Similarity=-0.059  Sum_probs=16.9

Q ss_pred             EEEEEeecCcccccCceee----e---e-EeCC-cceeccceeEEEEEEeecCCCccccccccCCCCC-CeEeceeeeee
Q 037939           65 VDMVRFRCGSLRRYGARVK----E---F-HLGI-GVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSG-YQLVSPVLGIL  134 (309)
Q Consensus        65 VsavRlRsgSLrr~G~~~~----e---F-~IP~-gv~~~P~v~Rv~lVyqnLG~NwSs~yy~~y~lpG-Y~lvsPVlGll  134 (309)
                      |-.++.|+++-|.+=..|.    +   - ..|+ ..-+.|...++-+--+|+-    +|-|    -+| =-.+++-|=+-
T Consensus       103 vY~l~~~~~~~~~~~~~~~v~v~~~~~~~~~p~p~~p~~p~~~~~~~~~~~~~----s~vf----~~Gdtf~~~v~l~~~  174 (439)
T PF02480_consen  103 VYTLYVRNDSGWAHQSVVFVTVKGPAPDPRTPPPHHPIVPHRHGATFHLKNYH----SHVF----SPGDTFHLSVHLQSE  174 (439)
T ss_dssp             -------------------------------------------SEEEEEE--S----EEE------TT--EE---EEEEE
T ss_pred             eEEEEecCCCCceEEEEEEEEEcCCCcCCCCCCCCCCCCCcccccEEEEeccc----eEEe----cCCCcEEEeEEEEec
Confidence            4466777777666442221    1   0 1221 1224466777777777655    6665    356 44567778888


Q ss_pred             eecC
Q 037939          135 AYNS  138 (309)
Q Consensus       135 aYda  138 (309)
                      ++|.
T Consensus       175 ~~d~  178 (439)
T PF02480_consen  175 AHDD  178 (439)
T ss_dssp             ESSS
T ss_pred             cCCC
Confidence            8874

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>KOG3637 consensus Vitronectin receptor, alpha subunit [Extracellular structures]

Probab=88.79  E-value=0.16  Score=56.70  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=23.8

Q ss_pred             cceEEEeecchhHHHHHHHHHHHHHHhhHHH---HHHHH-HHHHHHhccc
Q 037939          228 SRWKLAVGTTVGAAVGAFLLGLLLVAMFVKV---KKKAR-MEELERRAYE  273 (309)
Q Consensus       228 ~~Wk~ivg~vvGg~~glvlLgll~v~~~vr~---~rkkr-~~eMEr~A~~  273 (309)
                      --||||+++++||++   ||+||++++ -|.   ||+++ ..+||++...
T Consensus       976 vp~wiIi~svl~GLL---lL~llv~~L-wK~GFFKR~r~~~~~~~~~~~~ 1021 (1030)
T KOG3637|consen  976 VPLWIIILSVLGGLL---LLALLVLLL-WKCGFFKRNRKHPKEQEEEDKS 1021 (1030)
T ss_pred             cceeeehHHHHHHHH---HHHHHHHHH-HhcCccccCCCCcccccccccC
Confidence            367888888888754   445444333 444   55444 4455555443

>PF07271 Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR009896 This family consists of several Mycoplasma species specific Cytadhesin P32 and P30 proteins

Probab=86.05  E-value=0.7  Score=44.72  Aligned_cols=42  Identities=33%  Similarity=0.482  Sum_probs=27.0

Q ss_pred             ceEE-EeecchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 037939          229 RWKL-AVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERR  270 (309)
Q Consensus       229 ~Wk~-ivg~vvGg~~glvlLgll~v~~~vr~~rkkr~~eMEr~  270 (309)
                      .|++ .||+.+|-.+.+++||+-+-...+|.|.|+.+||-|++
T Consensus        67 ~W~~P~v~~~~G~~~v~liLgl~ig~p~~krkek~~iee~e~~  109 (279)
T PF07271_consen   67 SWFIPVVGGSAGLLAVALILGLAIGIPIYKRKEKRMIEEKEEH  109 (279)
T ss_pred             cceeeeccchhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHH
Confidence            5655 67766776555666776555555676666677777764

P30 has been found to be membrane associated and localised on the tip organelle. It is thought that it is important in cytadherence and virulence [].; GO: 0007157 heterophilic cell-cell adhesion, 0009405 pathogenesis, 0016021 integral to membrane

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=81.19  E-value=2.9  Score=40.64  Aligned_cols=46  Identities=24%  Similarity=0.243  Sum_probs=33.2

Q ss_pred             ccceEEEeecchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccc
Q 037939          227 ISRWKLAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERRAYEE  274 (309)
Q Consensus       227 ~~~Wk~ivg~vvGg~~glvlLgll~v~~~vr~~rkkr~~eMEr~A~~g  274 (309)
                      .++||+|- -++|.+.|+++|+||. .++....|-||.++||.---+-
T Consensus       207 ~~~~~~W~-iv~g~~~G~~~L~ll~-~lv~~~vr~krk~k~~eMEr~A  252 (278)
T PF06697_consen  207 RKRSWWWK-IVVGVVGGVVLLGLLS-LLVAMLVRYKRKKKIEEMERRA  252 (278)
T ss_pred             CCcceeEE-EEEEehHHHHHHHHHH-HHHHhhhhhhHHHHHHHHHHhh
Confidence            56888887 4444488888888766 4777779999988888644333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	309
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	94.05
4dlo_A	382	Brain-specific angiogenesis inhibitor 3; GAIN doma	93.71
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	92.99
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	92.07
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	91.45
3ud1_A	326	Ankyrin-1; beta sandwich, ZU5, adapter protein, sp	86.61
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	85.77
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	84.31

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=94.05  E-value=0.042  Score=42.57  Aligned_cols=39  Identities=15%  Similarity=0.319  Sum_probs=22.8

Q ss_pred             EEeecchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 037939          232 LAVGTTVGAAVGAFLLGLLLVAMFVKVKKKARMEELERR  270 (309)
Q Consensus       232 ~ivg~vvGg~~glvlLgll~v~~~vr~~rkkr~~eMEr~  270 (309)
                      .||++++||+++++|+.+++.-.++....||+-+++|++
T Consensus        12 ~Iv~gvi~gilliGllllliwk~~~~i~DrrE~~kFEkE   50 (79)
T 2knc_B           12 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEE   50 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            366777777666666555544444455555666666544

>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}

Probab=93.71  E-value=3.3  Score=39.48  Aligned_cols=106  Identities=13%  Similarity=0.226  Sum_probs=65.8

Q ss_pred             eeEeCCcceeccc--------eeEEE-EEEeecCCCccccccccCCCCCCeEeceeeeeeeecCCCCcCCCCceEEEEee
Q 037939           84 EFHLGIGVIVQPC--------VERVV-VVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILA  154 (309)
Q Consensus        84 eF~IP~gv~~~P~--------v~Rv~-lVyqnLG~NwSs~yy~~y~lpGY~lvsPVlGllaYdas~~~~~~n~~el~i~a  154 (309)
                      ...||......+-        +..+. +.|++||.     +.+. +-....+-++|++.-..+...     +        
T Consensus       244 ~V~ip~~~~~~~~~~~~~~~~~~v~~~v~y~~lg~-----~L~~-~~~~~~lns~Vis~sv~~~~~-----~--------  304 (382)
T 4dlo_A          244 RVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDL-----ILPT-LRNYTVINSKIIVVTIRPEPK-----T--------  304 (382)
T ss_dssp             EEEECGGGGSCCCC--CCTTCEEEEEEEEESSGGG-----TSCC-CSTTEEECSCEEEEEEESCCC-----C--------
T ss_pred             eEEcCHHHhcccccccCCCCceEEEEEEEECChHH-----hcCC-CCCCeeeeceEEEEEcCCCCc-----c--------
Confidence            3677766553321        33333 56999993     3221 111367889999998875331     1        


Q ss_pred             CCCceEEEcCCCccccCCCCCcceeEEEccCC-------------eEEEEecCCCceeEeeccceeEEEEeC
Q 037939          155 NGKPITIDFRNTTRVTNISGIKPFCANFQRDG-------------KVTLTNQVSPYVCVARKHGHFGLVTKY  213 (309)
Q Consensus       155 ~~~PI~V~F~~~~~~~~~~~~~~~Cv~F~~~G-------------~~~~~~~~~~nvC~~~~~GHfslVV~~  213 (309)
                      ..+||.|.|.+...    +...+.||.+|.+.             .+..++ ..--+|.-....||+|-...
T Consensus       305 l~~pV~i~f~h~~~----~~~~~~Cv~W~~~~~~~~~g~Ws~~GC~~~~~~-~~~t~C~C~Hlt~FavLm~~  371 (382)
T 4dlo_A          305 TDSFLEIELAHLAN----GTLNPYCVLWDDSKTNESLGTWSTQGCKTVLTD-ASHTKCLCDRLSTFAILAQQ  371 (382)
T ss_dssp             TTCCEEEEEECSCS----SCEEEEEEEEECC---CTTCEEECTTEEEEEEE-TTEEEEEESSCSEEEEEEEC
T ss_pred             cCCCEEEEEEeccC----CCCCceEeeeCCcCCCCCCCCccccccEEEEeC-CCEEEEECCCCchHHhhccc
Confidence            23699999998642    33578999999764             222222 23456777889999998854

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=92.99  E-value=0.01  Score=41.71  Aligned_cols=20  Identities=20%  Similarity=0.154  Sum_probs=14.3

Q ss_pred             EeecchhHHHHHHHHHHHHH
Q 037939          233 AVGTTVGAAVGAFLLGLLLV  252 (309)
Q Consensus       233 ivg~vvGg~~glvlLgll~v  252 (309)
                      |+++|+||+++++++++++.
T Consensus        13 IA~gVVgGv~~~~ii~~~~~   32 (44)
T 2ks1_B           13 IATGMVGALLLLLVVALGIG   32 (44)
T ss_dssp             STHHHHHHHHHHHHHHHHHH
T ss_pred             EEeehhHHHHHHHHHHHHHH
Confidence            67888998877776665443

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=92.07  E-value=0.0029  Score=46.35  Aligned_cols=40  Identities=28%  Similarity=0.204  Sum_probs=19.2

Q ss_pred             ceEEEeecchhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Q 037939          229 RWKLAVGTTVGAAVGAFLLGLLLV-AMFVKVKKKARMEELE  268 (309)
Q Consensus       229 ~Wk~ivg~vvGg~~glvlLgll~v-~~~vr~~rkkr~~eME  268 (309)
                      .||+|+++++||.+.+.++.+++- +-+.|.+|+...+++|
T Consensus         8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~~~~~~~~   48 (54)
T 2l8s_A            8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEKLE   48 (54)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCC--
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCcchhhHHh
Confidence            566788888887544444333222 2223444444444444

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=91.45  E-value=0.021  Score=40.09  Aligned_cols=20  Identities=15%  Similarity=0.305  Sum_probs=14.1

Q ss_pred             EeecchhHHHHHHHHHHHHH
Q 037939          233 AVGTTVGAAVGAFLLGLLLV  252 (309)
Q Consensus       233 ivg~vvGg~~glvlLgll~v  252 (309)
                      |+++|+||+++++++++++.
T Consensus        12 IA~gVVgGv~~v~ii~~~~~   31 (44)
T 2l2t_A           12 IAAGVIGGLFILVIVGLTFA   31 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeehHHHHHHHHHHHHHH
Confidence            67788888877766665443

>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C

Probab=86.61  E-value=5  Score=38.39  Aligned_cols=128  Identities=15%  Similarity=0.176  Sum_probs=77.3

Q ss_pred             CCccCCeEE-EEEeecCccc---ccCceeeeeEeCCcceeccceeEEEEEEeecCCCccccccccCCC-CCCeEeceeee
Q 037939           58 ANLSGIKVD-MVRFRCGSLR---RYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDL-SGYQLVSPVLG  132 (309)
Q Consensus        58 sNlSGi~Vs-avRlRsgSLr---r~G~~~~eF~IP~gv~~~P~v~Rv~lVyqnLG~NwSs~yy~~y~l-pGY~lvsPVlG  132 (309)
                      +|-||.=|| .|.=|.|+++   .-|+   .|.||||.+..|.  |+-.-+-|--     .+-...+| .|=.|+|+|+-
T Consensus         1 ~~~~gflvsF~VdarGg~~~~~~~~Gv---rl~IPpgA~~~pt--rI~crl~~p~-----~~~~~ppL~~gE~LvS~Vle   70 (326)
T 3ud1_A            1 SNATGFLVSFMVDARGGSMRGSRHNGL---RVVIPPRTCAAPT--RITCRLVKPQ-----KLSTPPPLAEEEGLASRIIA   70 (326)
T ss_dssp             ----CEEEEEEECTTCEEEECCTTTCC---EEEECTTSCSSCE--EEEEEEECGG-----GCSSCCCCCTTCEECSCEEE
T ss_pred             CCccceEEEEEEeCCCCEEecccCCCE---EEEECCCCCCCCe--EEEEEEeccc-----ccCCCCccCCCcccccceEE
Confidence            467888888 7888999985   3455   3789999999995  5554443321     11011234 57899999998


Q ss_pred             eeeecCCCCcCCCCceEEEEeeCCCceEEEcCCCccccCCCCCcceeEEEccCCeEEEEec-------------------
Q 037939          133 ILAYNSVTDVNFNNRFELQILANGKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQ-------------------  193 (309)
Q Consensus       133 llaYdas~~~~~~n~~el~i~a~~~PI~V~F~~~~~~~~~~~~~~~Cv~F~~~G~~~~~~~-------------------  193 (309)
                      +--.++.          +     .+||.|.+++....  .....-..|.-..||. +=+..                   
T Consensus        71 lgP~G~~----------F-----~~PV~l~iPh~a~~--~~~~REivVlrSd~G~-~W~eh~~~~~~~~l~~~l~g~~~~  132 (326)
T 3ud1_A           71 LGPTGAQ----------F-----LSPVIVEIPHFASH--GRGDRELVVLRSENGS-VWKEHRSRYGESYLDQILNGMDEE  132 (326)
T ss_dssp             EESTTCE----------E-----EEEEEEEEECCCSC--CSSSEEEEEEEESSSS-CCEECCCSSCGGGHHHHTTTCCCC
T ss_pred             eccCCcc----------C-----cccEEEEecccccc--CCCceEEEEEEecCCC-cceecccccchhHHHhhhcccccc
Confidence            7654432          3     25999999876433  2223555666666776 21111                   


Q ss_pred             -------CCC--ceeEeecc-ceeEEEEeC
Q 037939          194 -------VSP--YVCVARKH-GHFGLVTKY  213 (309)
Q Consensus       194 -------~~~--nvC~~~~~-GHfslVV~~  213 (309)
                             .+.  ..|.+++. ++|++|-+.
T Consensus       133 ~~sle~~~k~r~~ri~v~~fp~~FaVVSRl  162 (326)
T 3ud1_A          133 LGSLEELEKKRVCRIITTDFPLYFVIMSRL  162 (326)
T ss_dssp             CCCHHHHHC-CEEEEEEEECCSEEEEEEEE
T ss_pred             ccchhhhcCceEEEEEecCCCeEEEEEeeE
Confidence                   011  13678888 999999863

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=85.77  E-value=0.012  Score=42.98  Aligned_cols=19  Identities=11%  Similarity=-0.013  Sum_probs=12.3

Q ss_pred             ceEEEeecchhHHHHHHHH
Q 037939          229 RWKLAVGTTVGAAVGAFLL  247 (309)
Q Consensus       229 ~Wk~ivg~vvGg~~glvlL  247 (309)
                      .||+|+++++||++.+.++
T Consensus        11 p~wiIi~svl~GLllL~li   29 (54)
T 2knc_A           11 PIWWVLVGVLGGLLLLTIL   29 (54)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHH
Confidence            6777888888875444333

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=84.31  E-value=0.14  Score=36.02  Aligned_cols=19  Identities=21%  Similarity=0.436  Sum_probs=10.5

Q ss_pred             EeecchhHHHHHHHHHHHHH
Q 037939          233 AVGTTVGAAVGAFLLGLLLV  252 (309)
Q Consensus       233 ivg~vvGg~~glvlLgll~v  252 (309)
                      |+++++| ++.+++++++++
T Consensus        14 Ia~~vVG-vll~vi~~l~~~   32 (44)
T 2jwa_A           14 IISAVVG-ILLVVVLGVVFG   32 (44)
T ss_dssp             HHHHHHH-HHHHHHHHHHHH
T ss_pred             hHHHHHH-HHHHHHHHHHHH
Confidence            5566666 555555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00