Citrus Sinensis ID: 037960

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAYLC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEc
Coil and Loop (DISEMBL)
masssgtkkaggppprtqstkmsrAQTMFVDvqnedgpaidselvpsslaAIAPILRVANEiekdnprvaylc
Flexible Loop (DISEMBL)
masssgtkkaggppprtqstkmsrAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVaneiekdnprvaylc
Low Complexity Region (SEG)
MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAYLC
Disordered region (IsUnstruct)
***********************************************SLAAIAPILRVAN*************
Disordered Region (DISOPRED)
****************************************DSELVPSSLAAIAPILRVANEIEKDNPRVAYLC
Disordered Region (DISEMBL)
***********************RAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAYLC
Disordered Region (DISPRO)
*******************************************LVPSSLAAIAPILRVANEIEKDNPRVAYLC
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAYLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q9LYS6	1921	Putative callose synthase	yes	no	0.931	0.035	0.698	2e-20
Q9SHJ3	1958	Callose synthase 7 OS=Ara	no	no	0.986	0.036	0.597	8e-19
Q9LXT9	1955	Callose synthase 3 OS=Ara	no	no	0.794	0.029	0.545	6e-12
Q9SL03	1950	Callose synthase 2 OS=Ara	no	no	0.794	0.029	0.548	3e-11
Q9AUE0	1950	Callose synthase 1 OS=Ara	no	no	0.739	0.027	0.557	1e-10
Q3B724	1923	Callose synthase 5 OS=Ara	no	no	0.890	0.033	0.479	5e-09
Q9LUD7	1976	Putative callose synthase	no	no	0.904	0.033	0.381	0.0001

>sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 5/73 (6%)

Query: 2  ASSSGTKKAGGPPPRTQSTKM-SRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          ASSSGT +     PR+ S +  SRA TM +D  NED  A+DSELVPSSLA+IAPILRVAN
Sbjct: 3  ASSSGTAEL----PRSLSRRAPSRATTMMIDRPNEDASAMDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIEKDNPRVAYLC
Sbjct: 59 EIEKDNPRVAYLC 71

Probably involved in callose synthesis, but not required for callose formation after wounding or pathogen attack. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 3EC: 4

>sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=3

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 5/77 (6%)

Query: 2  ASSSGTKKAGGPPP-----RTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPIL 56
          ++SSG +   G PP     R+ S KM+RA TM ++  NED   IDSELVPSSLA+IAPIL
Sbjct: 3  STSSGGRGEDGRPPQMQPVRSMSRKMTRAGTMMIEHPNEDERPIDSELVPSSLASIAPIL 62

Query: 57 RVANEIEKDNPRVAYLC 73
          RVAN+I++DN RVAYLC
Sbjct: 63 RVANDIDQDNARVAYLC 79

Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 8/66 (12%)

Query: 11 GGP---PPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNP 67
          GGP   P + Q  ++ R QT         G + DSE+VPSSL  IAPILRVANE+E  NP
Sbjct: 6  GGPDQGPSQPQQRRIIRTQT-----AGNLGESFDSEVVPSSLVEIAPILRVANEVESSNP 60

Query: 68 RVAYLC 73
          RVAYLC
Sbjct: 61 RVAYLC 66

Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/62 (54%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 12 GPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAY 71
          GP P     ++ R QT      N     +DSE+VPSSL  IAPILRVANE+E  NPRVAY
Sbjct: 6  GPDPPPPQRRILRTQT----AGNLGEAMLDSEVVPSSLVEIAPILRVANEVEASNPRVAY 61

Query: 72 LC 73
          LC
Sbjct: 62 LC 63

Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 7/61 (11%)

Query: 13 PPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVANEIEKDNPRVAYL 72
          PPP+    ++ R QT    V +     +DSE+VPSSL  IAPILRVANE+E  NPRVAYL
Sbjct: 10 PPPQR---RILRTQT----VGSLGEAMLDSEVVPSSLVEIAPILRVANEVEASNPRVAYL 62

Query: 73 C 73
          C
Sbjct: 63 C 63

Involved in callose synthesis at the forming cell plate during cytokinesis. Not required for callose formation after wounding or pathogen attack. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 8/73 (10%)

Query: 1  MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          MA SS T    GP    +    S A T+ ++V        D E+VP+SL  IAPILRVA 
Sbjct: 1  MAQSS-TSHDSGPQGLMRRPSRSAATTVSIEV-------FDHEVVPASLGTIAPILRVAA 52

Query: 61 EIEKDNPRVAYLC 73
          EIE + PRVAYLC
Sbjct: 53 EIEHERPRVAYLC 65

Required for the formation of the callose wall separating the tetraspores (interstitial wall) and surrounding the pollen mother cells (pheripheral wall). Required for exine formation on pollen wall. May be involved in callose synthesis during pollen tube growth. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=2 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 10/76 (13%)

Query: 3  SSSGTKKAGGP----PPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAA-IAPILR 57
          S+S ++   GP    P R  +T+ +R+ T    V +E     DSE +P++LA+ I   LR
Sbjct: 15 STSYSRPILGPREDSPER--ATEFTRSLTFREHVSSE---PFDSERLPATLASEIQRFLR 69

Query: 58 VANEIEKDNPRVAYLC 73
          +AN +E + PR+AYLC
Sbjct: 70 IANLVESEEPRIAYLC 85

Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
224062688	1940	predicted protein [Populus trichocarpa]	1.0	0.037	0.726	4e-24
224085364	1944	predicted protein [Populus trichocarpa]	0.986	0.037	0.739	2e-23
255571406	1911	transferase, transferring glycosyl group	1.0	0.038	0.716	4e-23
297843450	1937	hypothetical protein ARALYDRAFT_470669 [	1.0	0.037	0.653	1e-20
334186113	1921	callose synthase [Arabidopsis thaliana]	0.931	0.035	0.698	1e-18
7529753	1808	putative protein [Arabidopsis thaliana]	0.931	0.037	0.698	1e-18
297817212	1934	hypothetical protein ARALYDRAFT_907409 [	0.931	0.035	0.684	3e-18
449492564	1930	PREDICTED: LOW QUALITY PROTEIN: callose	0.972	0.036	0.671	4e-18
449444250	1945	PREDICTED: callose synthase 7-like [Cucu	0.972	0.036	0.671	4e-18
6692688	1930	F12K11.17 [Arabidopsis thaliana]	0.986	0.037	0.597	4e-17

>gi|224062688|ref|XP_002300874.1| predicted protein [Populus trichocarpa] gi|222842600|gb|EEE80147.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/73 (72%), Positives = 61/73 (83%)

Query: 1  MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          MASSSGTK   GP PR+ S +M+RA TM +D+ +ED  ++DSELVPSSLA IAPILRVAN
Sbjct: 1  MASSSGTKNDTGPAPRSLSRRMTRAPTMMLDLPDEDNASVDSELVPSSLAGIAPILRVAN 60

Query: 61 EIEKDNPRVAYLC 73
          EIEKDNPRVAYLC
Sbjct: 61 EIEKDNPRVAYLC 73

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085364|ref|XP_002307554.1| predicted protein [Populus trichocarpa] gi|222857003|gb|EEE94550.1| predicted protein [Populus trichocarpa]

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/73 (73%), Positives = 61/73 (83%), Gaps = 1/73 (1%)

Query: 1  MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          MASSSGTK  GGPP R+ S +M RAQTM +D+ +ED P +DSE VPSSLA IAPILRVAN
Sbjct: 1  MASSSGTKNEGGPP-RSLSRRMMRAQTMVLDLADEDSPLVDSEAVPSSLALIAPILRVAN 59

Query: 61 EIEKDNPRVAYLC 73
          EIEK+NPRVAYLC
Sbjct: 60 EIEKENPRVAYLC 72

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571406|ref|XP_002526651.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223534018|gb|EEF35739.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/74 (71%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1  MASSSGTKKAGGP-PPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVA 59
          MASSSGTK  GG  PPR+ S KM+RAQTM VD+Q+ED   +DSELVPSS++ I PILRVA
Sbjct: 1  MASSSGTKNGGGGLPPRSLSRKMTRAQTMMVDLQDEDASVLDSELVPSSMSEIVPILRVA 60

Query: 60 NEIEKDNPRVAYLC 73
          NE+EKDN RVAYLC
Sbjct: 61 NEVEKDNRRVAYLC 74

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843450|ref|XP_002889606.1| hypothetical protein ARALYDRAFT_470669 [Arabidopsis lyrata subsp. lyrata] gi|297335448|gb|EFH65865.1| hypothetical protein ARALYDRAFT_470669 [Arabidopsis lyrata subsp. lyrata]

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 5/78 (6%)

Query: 1  MASSSGTKKAGGPPP-----RTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPI 55
          MAS+SG +   G PP     R+ S +M+RA TM +D  NED  AIDSELVPSSLA+IAPI
Sbjct: 1  MASTSGGRAEDGRPPQMQPVRSMSRRMTRAGTMMIDHPNEDESAIDSELVPSSLASIAPI 60

Query: 56 LRVANEIEKDNPRVAYLC 73
          LRVAN+IE+DNPRVAYLC
Sbjct: 61 LRVANDIEEDNPRVAYLC 78

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186113|ref|NP_191469.3| callose synthase [Arabidopsis thaliana] gi|189081840|sp|Q9LYS6.2|CALS6_ARATH RecName: Full=Putative callose synthase 6; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 11 gi|332646357|gb|AEE79878.1| callose synthase [Arabidopsis thaliana]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 5/73 (6%)

Query: 2  ASSSGTKKAGGPPPRTQSTKM-SRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          ASSSGT +     PR+ S +  SRA TM +D  NED  A+DSELVPSSLA+IAPILRVAN
Sbjct: 3  ASSSGTAEL----PRSLSRRAPSRATTMMIDRPNEDASAMDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIEKDNPRVAYLC
Sbjct: 59 EIEKDNPRVAYLC 71

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7529753|emb|CAB86938.1| putative protein [Arabidopsis thaliana]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 5/73 (6%)

Query: 2  ASSSGTKKAGGPPPRTQSTKM-SRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          ASSSGT +     PR+ S +  SRA TM +D  NED  A+DSELVPSSLA+IAPILRVAN
Sbjct: 3  ASSSGTAEL----PRSLSRRAPSRATTMMIDRPNEDASAMDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIEKDNPRVAYLC
Sbjct: 59 EIEKDNPRVAYLC 71

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817212|ref|XP_002876489.1| hypothetical protein ARALYDRAFT_907409 [Arabidopsis lyrata subsp. lyrata] gi|297322327|gb|EFH52748.1| hypothetical protein ARALYDRAFT_907409 [Arabidopsis lyrata subsp. lyrata]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 5/73 (6%)

Query: 2  ASSSGTKKAGGPPPRTQSTKM-SRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          ASSSGT +     PR+ S +  SRA TM +D  NED  A+DSELVPSSLA+IAPILRVAN
Sbjct: 3  ASSSGTAEL----PRSLSRRAPSRATTMMIDRPNEDASAMDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIEK+NPRVAYLC
Sbjct: 59 EIEKENPRVAYLC 71

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449492564|ref|XP_004159034.1| PREDICTED: LOW QUALITY PROTEIN: callose synthase 7-like [Cucumis sativus]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 2/73 (2%)

Query: 1  MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          MASSSG+K   GPP R+ S +M+R  T  V++  ED   IDSELVPSSLA+IAPILRVAN
Sbjct: 1  MASSSGSKNEVGPP-RSLSRRMTRTPTRMVELP-EDNSGIDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIE +NPRVAYLC
Sbjct: 59 EIEPENPRVAYLC 71

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444250|ref|XP_004139888.1| PREDICTED: callose synthase 7-like [Cucumis sativus]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 2/73 (2%)

Query: 1  MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
          MASSSG+K   GPP R+ S +M+R  T  V++  ED   IDSELVPSSLA+IAPILRVAN
Sbjct: 1  MASSSGSKNEVGPP-RSLSRRMTRTPTRMVELP-EDNSGIDSELVPSSLASIAPILRVAN 58

Query: 61 EIEKDNPRVAYLC 73
          EIE +NPRVAYLC
Sbjct: 59 EIEPENPRVAYLC 71

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692688|gb|AAF24822.1|AC007592_15 F12K11.17 [Arabidopsis thaliana]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 5/77 (6%)

Query: 2  ASSSGTKKAGGPPP-----RTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPIL 56
          ++SSG +   G PP     R+ S KM+RA TM ++  NED   IDSELVPSSLA+IAPIL
Sbjct: 3  STSSGGRGEDGRPPQMQPVRSMSRKMTRAGTMMIEHPNEDERPIDSELVPSSLASIAPIL 62

Query: 57 RVANEIEKDNPRVAYLC 73
          RVAN+I++DN RVAYLC
Sbjct: 63 RVANDIDQDNARVAYLC 79

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
TAIR|locus:2031938	1950	CALS1 "callose synthase 1" [Ar	0.726	0.027	0.564	2.1e-08
TAIR|locus:2040456	1923	CALS5 "callose synthase 5" [Ar	0.890	0.033	0.479	3.1e-07
TAIR|locus:2099367	347	AT3G14780 "AT3G14780" [Arabido	0.452	0.095	0.617	0.0002

TAIR|locus:2031938 CALS1 "callose synthase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 35/62 (56%), Positives = 42/62 (67%)

Query:    13 PPPRTQSTKMSRAQTMFVDVQNEDGPA-IDSELVPSSLAAIAPILRVANEIEKDNPRVAY 71
             PPP+    ++ R QT+        G A +DSE+VPSSL  IAPILRVANE+E  NPRVAY
Sbjct:    10 PPPQR---RILRTQTV-----GSLGEAMLDSEVVPSSLVEIAPILRVANEVEASNPRVAY 61

Query:    72 LC 73
             LC
Sbjct:    62 LC 63

GO:0000148 "1,3-beta-D-glucan synthase complex" evidence=IEA;ISS

GO:0003843 "1,3-beta-D-glucan synthase activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006075 "(1->3)-beta-D-glucan biosynthetic process" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0009504 "cell plate" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2040456 CALS5 "callose synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 35/73 (47%), Positives = 42/73 (57%)

Query:     1 MASSSGTKKAGGPPPRTQSTKMSRAQTMFVDVQNEDGPAIDSELVPSSLAAIAPILRVAN 60
             MA SS T    GP    +    S A T+ ++V        D E+VP+SL  IAPILRVA 
Sbjct:     1 MAQSS-TSHDSGPQGLMRRPSRSAATTVSIEV-------FDHEVVPASLGTIAPILRVAA 52

Query:    61 EIEKDNPRVAYLC 73
             EIE + PRVAYLC
Sbjct:    53 EIEHERPRVAYLC 65

GO:0000148 "1,3-beta-D-glucan synthase complex" evidence=IEA;ISS

GO:0003843 "1,3-beta-D-glucan synthase activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006075 "(1->3)-beta-D-glucan biosynthetic process" evidence=IEA;ISS;IMP

GO:0016020 "membrane" evidence=IEA

GO:0009556 "microsporogenesis" evidence=IMP

GO:0010208 "pollen wall assembly" evidence=IMP

GO:0009846 "pollen germination" evidence=IMP

GO:0009860 "pollen tube growth" evidence=RCA;IMP

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2099367 AT3G14780 "AT3G14780" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
 Identities = 21/34 (61%), Positives = 26/34 (76%)

Query:    41 DSELVPSSLAA-IAPILRVANEIEKDNPRVAYLC 73
             DSE +P +LA+ I   LRVAN +E D+PRVAYLC
Sbjct:    48 DSEKLPETLASGIQRFLRVANLVESDDPRVAYLC 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.125   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        73   0.00091  102 3  11 23  0.40    29
                                                     29  0.45    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  400 (43 KB)
  Total size of DFA:  68 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.47u 0.18s 9.65t   Elapsed:  00:00:00
  Total cpu time:  9.47u 0.18s 9.65t   Elapsed:  00:00:00
  Start:  Fri May 10 07:36:43 2013   End:  Fri May 10 07:36:43 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_II000551 hypothetical protein (1940 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
KOG0916	1679	consensus 1,3-beta-glucan synthase/callose synthas	98.37
KOG0917	338	consensus Uncharacterized conserved protein [Funct	83.53

>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]

Probab=98.37  E-value=1.5e-07  Score=84.38  Aligned_cols=46  Identities=59%  Similarity=0.765  Sum_probs=37.7

Q ss_pred             eeeecccCCCCCCCCCccCCcccc-chhhHhhhccccccCCCcccccC
Q 037960           27 TMFVDVQNEDGPAIDSELVPSSLA-AIAPILRVANEIEKDNPRVAYLC   73 (73)
Q Consensus        27 t~~v~~~~~~~~~~dSE~vPssl~-~I~piLRvAneiE~~~PRVAyLC   73 (73)
                      +.+++.++.+ +.+|++.+|+|+. +|+||||+||+||++|||+||||
T Consensus        14 ~~~~~~~~~~-~~~~~~~~~~s~~~~i~pilr~a~~i~~~~p~~a~l~   60 (1679)
T KOG0916|consen   14 DQTIYDGYEY-ESYDSSGLPSSLYDDIAPILRVANEIEQQNPRVAYLC   60 (1679)
T ss_pred             hhhhccCCCC-CCCCcccCCcccccccchhhhccccccccCchhhhcc
Confidence            3333345555 5888888888888 59999999999999999999999

>KOG0917 consensus Uncharacterized conserved protein [Function unknown]

Probab=83.53  E-value=0.32  Score=38.72  Aligned_cols=23  Identities=48%  Similarity=0.772  Sum_probs=22.3

Q ss_pred             chhhHhhhccccccCCCcccccC
Q 037960           51 AIAPILRVANEIEKDNPRVAYLC   73 (73)
Q Consensus        51 ~I~piLRvAneiE~~~PRVAyLC   73 (73)
                      .|.++||.|.|.++.+|-|||.|
T Consensus        10 si~~~l~~a~e~~k~dpvvayyc   32 (338)
T KOG0917|consen   10 SIQHHLRTAQEHDKRDPVVAYYC   32 (338)
T ss_pred             HHHHHHHHHHhhcccccHHHHHH
Confidence            79999999999999999999988

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
2lxl_A	183	Vacuolar protein sorting-associated protein VTA1;	98.42
2rkk_A	168	Vacuolar protein sorting-associated protein VTA1;	91.69

>2lxl_A Vacuolar protein sorting-associated protein VTA1; MIT, protein transport; NMR {Homo sapiens} PDB: 2lxm_A

Probab=98.42  E-value=1.6e-08  Score=71.27  Aligned_cols=33  Identities=36%  Similarity=0.607  Sum_probs=30.7

Q ss_pred             CCccCCccccchhhHhhhccccccCCCcccccC
Q 037960           41 DSELVPSSLAAIAPILRVANEIEKDNPRVAYLC   73 (73)
Q Consensus        41 dSE~vPssl~~I~piLRvAneiE~~~PRVAyLC   73 (73)
                      +=..||++|..|.||||.|+|+|..+|+|||+|
T Consensus         6 ~l~~vP~~LK~I~p~L~~A~Ele~~~PvVaY~C   38 (183)
T 2lxl_A            6 PLPPLPAQFKSIQHHLRTAQEHDKRDPVVAYYC   38 (183)
T ss_dssp             CCCCCCGGGSSSHHHHHHHHHHHHHCHHHHHHH
T ss_pred             CCCCCChhHHhHHHHHHHHHHHhhcccHHHHHH
Confidence            345799999999999999999999999999999

>2rkk_A Vacuolar protein sorting-associated protein VTA1; MIT motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 2.90A {Saccharomyces cerevisiae}

Probab=91.69  E-value=0.014  Score=41.03  Aligned_cols=23  Identities=17%  Similarity=0.255  Sum_probs=21.8

Q ss_pred             chhhHhhhccccccC-CCcccccC
Q 037960           51 AIAPILRVANEIEKD-NPRVAYLC   73 (73)
Q Consensus        51 ~I~piLRvAneiE~~-~PRVAyLC   73 (73)
                      .|.|+|+-|+|+|.. +|-|||-|
T Consensus         5 ~i~p~l~rA~Ele~~~~PvVaYyC   28 (168)
T 2rkk_A            5 NAARVVATAKDFDKVGLGIIGYYL   28 (168)
T ss_dssp             HHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCcchhHHH
Confidence            589999999999999 99999988

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00