Citrus Sinensis ID: 037978

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTDF
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccEEEEEEHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHEEEEEEEEEEHEEEEHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAtavdpkrgnigiiapIAIGFIVGANilaggafdgasmnpavsfgpavvswtwdnhwvywLGPFIGAAIAAIAYSVAfigpntheqlpstdf
Flexible Loop (DISEMBL)
etsafalssgvgaWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNtheqlpstdf
Low Complexity Region (SEG)
ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNigiiapiaigfivgaNILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGaaiaaiaYSVAFIGPNTHEQLPSTDF
Disordered region (IsUnstruct)
*****ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG************
Disordered Region (DISOPRED)
**SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPN**********
Disordered Region (DISEMBL)
*********GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTH********
Disordered Region (DISPRO)
*****ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNT*********
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTDF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
Q94CS9	252	Probable aquaporin TIP1-2	yes	no	0.975	0.480	0.818	4e-53
O82598	252	Aquaporin TIP1-3 OS=Arabi	yes	no	1.0	0.492	0.830	7e-53
Q9ATM0	254	Aquaporin TIP1-2 OS=Zea m	N/A	no	0.959	0.468	0.781	3e-49
Q41963	253	Aquaporin TIP1-2 OS=Arabi	no	no	0.975	0.478	0.776	1e-48
P25818	251	Aquaporin TIP1-1 OS=Arabi	no	no	0.967	0.478	0.768	5e-47
P50156	250	Probable aquaporin TIP1-1	no	no	0.975	0.484	0.715	3e-45
O64964	250	Aquaporin TIP1-1 OS=Zea m	N/A	no	0.975	0.484	0.715	3e-44
P42067	249	Probable aquaporin TIP-ty	N/A	no	0.967	0.481	0.785	3e-41
Q9FY14	250	Probable aquaporin TIP-ty	N/A	no	0.967	0.48	0.785	3e-41
Q9ATL7	262	Aquaporin TIP3-1 OS=Zea m	N/A	no	0.967	0.458	0.579	2e-38

>sp|Q94CS9|TIP12_ORYSJ Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1

 Score =  206 bits (524), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF+LS+GVGAWNAVVFEIVMTFGLVYTVYATAVDPK+G++G+IAPIAIGFIVGANILAGG
Sbjct: 132 AFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGG 191

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AFDGASMNPAVSFGPAVV+  WDNHWVYWLGPF+GAAIAA+ Y + FIG   H+QLP+ D
Sbjct: 192 AFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLPTAD 251

Query: 124 F 124
           +
Sbjct: 252 Y 252

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|O82598|TIP13_ARATH Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1

 Score =  205 bits (521), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 103/124 (83%), Positives = 109/124 (87%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ET+AF+LS GV  WNAVVFEIVMTFGLVYTVYATAVDPK+G+IGIIAP+AIG IVGANIL
Sbjct: 129 ETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
            GGAFDGASMNPAVSFGPAVVSW W NHWVYW+GPFIGAAIAAI Y   FIG N HE LP
Sbjct: 189 VGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLP 248

Query: 121 STDF 124
           S DF
Sbjct: 249 SNDF 252

Potential aquaporin, which may facilitate the transport of water and small neutral solutes across cell membranes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ATM0|TIP12_MAIZE Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1

 Score =  193 bits (490), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 107/119 (89%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF+LS+GVGA NAVV E+VMTFGLVYTVYATAVDPK+G++G+IAPIAIGFIVGANILAGG
Sbjct: 132 AFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGG 191

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPST 122
           AFDGASMNPAVSFGPAVV+  W+NHWVYW+GP  GAAIAA+ Y + FIG   H+QLP+T
Sbjct: 192 AFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRPHQQLPTT 250

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q41963|TIP12_ARATH Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 103/121 (85%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF LS+GVG+ NA+VFEIVMTFGLVYTVYATAVDPK G++G IAPIAIGFIVGANILAGG
Sbjct: 133 AFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGG 192

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AF GASMNPAV+FGPAVVSWTW NHWVYW GP IG  +A I Y   FI  N HEQLP+TD
Sbjct: 193 AFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLPTTD 252

Query: 124 F 124
           +
Sbjct: 253 Y 253

Water channel required to facilitate the transport of water across cell membrane. May be involved in the osmoregulation in plants under high osmotic stress such as under a high salt condition. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells.

Arabidopsis thaliana (taxid: 3702)

>sp|P25818|TIP11_ARATH Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1

 Score =  186 bits (471), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 93/121 (76%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF LS+GVG  NA VFEIVMTFGLVYTVYATA+DPK G++G IAPIAIGFIVGANILAGG
Sbjct: 132 AFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGG 191

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AF GASMNPAV+FGPAVVSWTW NHWVYW GP +G  IA + Y V FI   THEQLP+TD
Sbjct: 192 AFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFIN-TTHEQLPTTD 250

Query: 124 F 124
           +
Sbjct: 251 Y 251

Water channel required to facilitate the transport of water, diffusion of amino acids and/or peptides from the vacuolar compartment to the cytoplasm. Does not promote glycerol permeability. May play a role in the control of cell turgor and cell expansion. Its function is impaired by Hg(2+). May be involved in a vesicle-based metabolite routing through or between pre-vacuolar compartments and the central vacuole. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells.

Arabidopsis thaliana (taxid: 3702)

>sp|P50156|TIP11_ORYSJ Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1

 Score =  179 bits (455), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 103/123 (83%), Gaps = 2/123 (1%)

Query: 2   TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILA 61
           T  F L+ GV  W A+V EIVMTFGLVYTVYATAVDPK+G++G IAPIAIGFIVGANIL 
Sbjct: 130 TGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILV 188

Query: 62  GGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPS 121
           GGAFDGASMNPAVSFGPA+VSW+W++ WVYW+GP IG  +A + Y V FI  +THEQLP+
Sbjct: 189 GGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFI-SHTHEQLPT 247

Query: 122 TDF 124
           TD+
Sbjct: 248 TDY 250

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O64964|TIP11_MAIZE Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 2/123 (1%)

Query: 2   TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILA 61
           T  F L+ GV  W A+V EIVMTFGLVYTVYATAVDPK+G++G IAPIAIGFIVGANIL 
Sbjct: 130 TGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILV 188

Query: 62  GGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPS 121
           GGAFDGASMNPAVSFGPA+VSW W   WVYW+GP IG  +A + Y + FI  +THEQLPS
Sbjct: 189 GGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFI-SHTHEQLPS 247

Query: 122 TDF 124
           TD+
Sbjct: 248 TDY 250

Water channel required to facilitate the transport of water across cell membrane. May support the rapid influx of water into vacuoles during cell expansion, permit osmotic equilibration between the cytosol and the vacuolar content and rapid transcellular water flow through living cells. Its function is impaired by Hg(2+).

Zea mays (taxid: 4577)

>sp|P42067|TIP1_MEDSA Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF LS GVG   A+V EIVMTFGLVYTVYATAVDPK+GNIGIIAPIAIGFIVGANIL GG
Sbjct: 130 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGG 189

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AF GASMNPAVSFGPAVVSW+W NHWVYW GP IG  IA + Y V FI  +THEQLP+TD
Sbjct: 190 AFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFIN-STHEQLPTTD 248

Query: 124 F 124
           +
Sbjct: 249 Y 249

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Medicago sativa (taxid: 3879)

>sp|Q9FY14|TIP1_MEDTR Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF LS GVG   A+V EIVMTFGLVYTVYATAVDPK+GNIGIIAPIAIGFIVGANIL GG
Sbjct: 131 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGG 190

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AF GASMNPAVSFGPAVVSW+W NHWVYW GP IG  IA + Y V FI  +THEQLP+TD
Sbjct: 191 AFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFIN-STHEQLPTTD 249

Query: 124 F 124
           +
Sbjct: 250 Y 250

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May have a role in buffering osmotic fluctations in the highly compartmented vacuole of arbuscule cells.

Medicago truncatula (taxid: 3880)

>sp|Q9ATL7|TIP31_MAIZE Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/126 (57%), Positives = 93/126 (73%), Gaps = 6/126 (4%)

Query: 5   FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGA 64
           FAL+SGVG W+AV+ E VMTFGL+Y  YAT +DPKRG++G IAP+A+GF++GAN+LAGG 
Sbjct: 137 FALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGP 196

Query: 65  FDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG------PNTHEQ 118
           FDGA MNPA  FGPA+V W W +HWVYWLGPF+GA +A + Y    I       P+ H+ 
Sbjct: 197 FDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAVPHAHQP 256

Query: 119 LPSTDF 124
           L   D+
Sbjct: 257 LAPEDY 262

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
255580588	252	tonoplast intrinsic protein, putative [R	1.0	0.492	0.911	2e-58
444300800	252	aquaporin protein 6 [Camellia sinensis]	1.0	0.492	0.838	3e-55
351722853	255	nodulin-26 [Glycine max] gi|310578|gb|AA	0.991	0.482	0.869	4e-54
224112847	252	aquaporin, MIP family, TIP subfamily [Po	1.0	0.492	0.862	8e-54
224098284	252	aquaporin, MIP family, TIP subfamily [Po	1.0	0.492	0.862	1e-53
260408314	252	tonoplast intrinsic protein [Hevea brasi	0.991	0.488	0.821	3e-53
388281852	166	putative tonoplast intrinsic protein 1,	1.0	0.746	0.830	4e-53
224059532	252	aquaporin, MIP family, TIP subfamily [Po	1.0	0.492	0.919	2e-52
82468912	252	tonoplast intrinsic protein [Olea europa	0.975	0.480	0.836	2e-52
115383193	252	tonoplast intrinsic protein [Triticum ae	0.975	0.480	0.826	4e-52

>gi|255580588|ref|XP_002531118.1| tonoplast intrinsic protein, putative [Ricinus communis] gi|223529314|gb|EEF31283.1| tonoplast intrinsic protein, putative [Ricinus communis]

 Score =  229 bits (584), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/124 (91%), Positives = 117/124 (94%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK+GNIGIIAP+AIGFIVGANIL
Sbjct: 129 ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGNIGIIAPLAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPF+GA IAAI Y   FI P+THEQLP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFVGAGIAAIVYETFFISPSTHEQLP 248

Query: 121 STDF 124
           S DF
Sbjct: 249 SADF 252

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444300800|gb|AGD98709.1| aquaporin protein 6 [Camellia sinensis]

 Score =  218 bits (555), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/124 (83%), Positives = 117/124 (94%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAF+LSSGV  WNA+VFEIVMTFGLVYTVYATA+DPK+G++GIIAPIAIGFIVGANIL
Sbjct: 129 ETSAFSLSSGVTVWNALVFEIVMTFGLVYTVYATALDPKKGDLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFD ASMNPAVSFGPAVVSWTWD+HWVYWLGPFIG+AIAA+ Y + FI P+THEQLP
Sbjct: 189 AGGAFDDASMNPAVSFGPAVVSWTWDSHWVYWLGPFIGSAIAALVYELIFISPSTHEQLP 248

Query: 121 STDF 124
           +TD+
Sbjct: 249 TTDY 252

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722853|ref|NP_001238026.1| nodulin-26 [Glycine max] gi|310578|gb|AAA02947.1| nodulin-26 [Glycine max]

 Score =  214 bits (546), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 107/123 (86%), Positives = 113/123 (91%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAFALS GV A NA+VFEIVMTFGLVYTVYATAVDPK+G++GIIAPIAIGFIVGANIL
Sbjct: 129 ETSAFALSPGVEAGNALVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTW NHWVYW+GPF GAAIAAI Y + FI PNTHEQLP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWSNHWVYWVGPFAGAAIAAIVYEIFFISPNTHEQLP 248

Query: 121 STD 123
            TD
Sbjct: 249 VTD 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112847|ref|XP_002316308.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa] gi|118484362|gb|ABK94058.1| unknown [Populus trichocarpa] gi|222865348|gb|EEF02479.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa]

 Score =  213 bits (543), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 107/124 (86%), Positives = 112/124 (90%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ET AF LSSGVGAWNA+VFEIVMTFGLVYTVYATAVDPK+GN+GIIAPIAIGFIVGANIL
Sbjct: 129 ETPAFGLSSGVGAWNALVFEIVMTFGLVYTVYATAVDPKKGNLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTW NHWVYWLGPFIGAAIAA+ Y   FIG   HE LP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAALVYDNIFIGSGGHEPLP 248

Query: 121 STDF 124
           + DF
Sbjct: 249 TNDF 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098284|ref|XP_002311146.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa] gi|222850966|gb|EEE88513.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa]

 Score =  213 bits (541), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/124 (86%), Positives = 111/124 (89%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ET AF LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK+GN+GIIAPIAIGFIVGANIL
Sbjct: 129 ETPAFGLSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTW NHWVYWLGPFIGA IAA+ Y   FIG   HE LP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAGIAALVYDNIFIGSGGHEPLP 248

Query: 121 STDF 124
           + DF
Sbjct: 249 TNDF 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260408314|gb|ACX37451.1| tonoplast intrinsic protein [Hevea brasiliensis]

 Score =  212 bits (539), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/123 (82%), Positives = 111/123 (90%)

Query: 2   TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILA 61
           T+ FALSSGVG WNA VFEIVMTFGLVYTVYATA+DPK+GN+GIIAPIAIGFIVGANILA
Sbjct: 130 TAGFALSSGVGVWNAFVFEIVMTFGLVYTVYATAIDPKKGNLGIIAPIAIGFIVGANILA 189

Query: 62  GGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPS 121
           GGAFDGASMNPAVSFGPA+VSW+WDNHWVYW GP IG  +A + Y + FIG NTHEQLPS
Sbjct: 190 GGAFDGASMNPAVSFGPALVSWSWDNHWVYWAGPLIGGGLAGVVYELLFIGHNTHEQLPS 249

Query: 122 TDF 124
           TD+
Sbjct: 250 TDY 252

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388281852|dbj|BAM15884.1| putative tonoplast intrinsic protein 1, partial [Pyrus pyrifolia var. culta]

 Score =  211 bits (538), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 103/124 (83%), Positives = 112/124 (90%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAF+LSSGV  WNA+V EIV+TFGLVYTVYATAVDPK GNIG IAPIAIGFIVGANIL
Sbjct: 43  ETSAFSLSSGVSVWNALVLEIVITFGLVYTVYATAVDPKNGNIGTIAPIAIGFIVGANIL 102

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
             GAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAA+ Y + FI  +TH+QLP
Sbjct: 103 VAGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAVVYELIFIAQDTHQQLP 162

Query: 121 STDF 124
           +TD+
Sbjct: 163 TTDY 166

Source: Pyrus pyrifolia var. culta

Species: Pyrus pyrifolia

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059532|ref|XP_002299893.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa] gi|222847151|gb|EEE84698.1| aquaporin, MIP family, TIP subfamily [Populus trichocarpa]

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/124 (91%), Positives = 120/124 (96%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK+G+IGIIAPIAIGFIVGANIL
Sbjct: 129 ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTWD+HWVYWLGPF+G+AIAAI Y V FI P+THEQLP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWDSHWVYWLGPFVGSAIAAIVYEVIFINPSTHEQLP 248

Query: 121 STDF 124
           STDF
Sbjct: 249 STDF 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82468912|gb|ABB76813.1| tonoplast intrinsic protein [Olea europaea]

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/122 (83%), Positives = 113/122 (92%), Gaps = 1/122 (0%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAFALSSGV  WNAV+FEIVMTFGLVYTVYATAVDPK+GN+GIIAPIAIGFIVGANIL
Sbjct: 129 ETSAFALSSGVTVWNAVIFEIVMTFGLVYTVYATAVDPKKGNLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTWD+HWVYWLGPF+GA IAA+ Y + FI   +H+QLP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWDSHWVYWLGPFVGAGIAALVYEILFIN-QSHQQLP 247

Query: 121 ST 122
           ++
Sbjct: 248 TS 249

Source: Olea europaea

Species: Olea europaea

Genus: Olea

Family: Oleaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115383193|gb|ABI96817.1| tonoplast intrinsic protein [Triticum aestivum]

 Score =  207 bits (528), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/121 (82%), Positives = 111/121 (91%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           AF+LS+GVG WNAVVFEIVMTFGLVYTVYATAVDPKRG++G+IAPIAIGFIVGANILAGG
Sbjct: 132 AFSLSAGVGVWNAVVFEIVMTFGLVYTVYATAVDPKRGDLGVIAPIAIGFIVGANILAGG 191

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           AFDGASMNPAVSFGPAVVS  W+NHWVYWLGPF+GAAIAA+ Y + FIG   HEQLP+ D
Sbjct: 192 AFDGASMNPAVSFGPAVVSGVWENHWVYWLGPFVGAAIAALVYDICFIGQRPHEQLPTAD 251

Query: 124 F 124
           +
Sbjct: 252 Y 252

Source: Triticum aestivum

Species: Triticum aestivum

Genus: Triticum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
TAIR|locus:2116987	252	TIP1;3 "tonoplast intrinsic pr	1.0	0.492	0.677	4e-42
TAIR|locus:2088867	253	TIP2 "tonoplast intrinsic prot	0.975	0.478	0.652	2.3e-39
TAIR|locus:2057906	251	GAMMA-TIP "gamma tonoplast int	0.967	0.478	0.644	2.6e-38
TAIR|locus:2197279	268	TIP3;1 [Arabidopsis thaliana (	0.903	0.417	0.517	1.5e-28
TAIR|locus:2030968	267	BETA-TIP "beta-tonoplast intri	0.903	0.419	0.486	2.2e-27
TAIR|locus:2094977	250	DELTA-TIP "delta tonoplast int	0.959	0.476	0.470	6.6e-26
TAIR|locus:2043505	249	TIP4;1 "tonoplast intrinsic pr	0.887	0.441	0.490	5.9e-25
TAIR|locus:2130883	250	TIP2;2 "tonoplast intrinsic pr	0.927	0.46	0.470	5.3e-24
TAIR|locus:2168953	250	TIP2;3 "tonoplast intrinsic pr	0.854	0.424	0.509	1.4e-23
ZFIN|ZDB-GENE-040724-152	320	aqp4 "aquaporin 4" [Danio reri	0.838	0.325	0.4	9.5e-18

TAIR|locus:2116987 TIP1;3 "tonoplast intrinsic protein 1;3" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 84/124 (67%), Positives = 89/124 (71%)

Query:     1 ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNIL 60
             ET+AF+LS GV  WNAVVFEIVMTFGLVYTVYATAVDPK+G+               NIL
Sbjct:   129 ETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANIL 188

Query:    61 AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHEQLP 120
              GGAFDGASMNPAVSFGPAVVSW W NHWVYW+GPFIG       Y   FIG N HE LP
Sbjct:   189 VGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLP 248

Query:   121 STDF 124
             S DF
Sbjct:   249 SNDF 252

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA;IDA

GO:0015250 "water channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015204 "urea transmembrane transporter activity" evidence=IDA

GO:0015840 "urea transport" evidence=IDA

TAIR|locus:2088867 TIP2 "tonoplast intrinsic protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 79/121 (65%), Positives = 86/121 (71%)

Query:     4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGG 63
             AF LS+GVG+ NA+VFEIVMTFGLVYTVYATAVDPK G+               NILAGG
Sbjct:   133 AFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGG 192

Query:    64 AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHEQLPSTD 123
             AF GASMNPAV+FGPAVVSWTW NHWVYW GP IG       Y   FI  N HEQLP+TD
Sbjct:   193 AFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLPTTD 252

Query:   124 F 124
             +
Sbjct:   253 Y 253

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA;RCA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0030104 "water homeostasis" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0080170 "hydrogen peroxide transmembrane transport" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0043674 "columella" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2057906 GAMMA-TIP "gamma tonoplast intrinsic protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 78/121 (64%), Positives = 85/121 (70%)

Query:     4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGG 63
             AF LS+GVG  NA VFEIVMTFGLVYTVYATA+DPK G+               NILAGG
Sbjct:   132 AFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGG 191

Query:    64 AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHEQLPSTD 123
             AF GASMNPAV+FGPAVVSWTW NHWVYW GP +G       Y V FI   THEQLP+TD
Sbjct:   192 AFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFIN-TTHEQLPTTD 250

Query:   124 F 124
             +
Sbjct:   251 Y 251

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA;IDA;RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=TAS

GO:0015250 "water channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015204 "urea transmembrane transporter activity" evidence=IGI

GO:0015840 "urea transport" evidence=IGI

GO:0005773 "vacuole" evidence=IDA

GO:0080170 "hydrogen peroxide transmembrane transport" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0000326 "protein storage vacuole" evidence=IDA

GO:0042807 "central vacuole" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2197279 TIP3;1 [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 59/114 (51%), Positives = 71/114 (62%)

Query:     5 FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGA 64
             F L+SGVGA N +V EI++TFGLVY VY+T +DPKRG+               NIL GG 
Sbjct:   141 FRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGP 200

Query:    65 FDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIG--PNTH 116
             F GASMNPA +FGPA+V W W +HW+YW+GPFIG       Y    I   P TH
Sbjct:   201 FSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVIPTEPPTH 254

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006914 "autophagy" evidence=TAS

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0000326 "protein storage vacuole" evidence=IDA

GO:0042807 "central vacuole" evidence=IDA

TAIR|locus:2030968 BETA-TIP "beta-tonoplast intrinsic protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 55/113 (48%), Positives = 71/113 (62%)

Query:     5 FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGA 64
             F ++SGV   + ++ EI++TF LVY VY+TA+DPKRG+               NIL GG 
Sbjct:   141 FHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGP 200

Query:    65 FDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHE 117
             FDGASMNPA +FGPA+V W W NHW+YW+GPFIG       Y    I P+ +E
Sbjct:   201 FDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMII-PSVNE 252

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2094977 DELTA-TIP "delta tonoplast integral protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 56/119 (47%), Positives = 71/119 (59%)

Query:     6 ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAF 65
             ++++G+G+   VV EI++TF LVYTVYATA DPK+G+               NILA G F
Sbjct:   132 SVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPF 191

Query:    66 DGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHEQLPSTDF 124
              G SMNPA SFGPAV +  +  HWVYW+GP IG       Y   F+G + H  L S DF
Sbjct:   192 SGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLASADF 250

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA;IDA

GO:0015250 "water channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015204 "urea transmembrane transporter activity" evidence=IGI

GO:0015840 "urea transport" evidence=IGI

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0015200 "methylammonium transmembrane transporter activity" evidence=IDA

GO:0051739 "ammonia transmembrane transporter activity" evidence=IGI

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0000326 "protein storage vacuole" evidence=IDA

GO:0042807 "central vacuole" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2043505 TIP4;1 "tonoplast intrinsic protein 4;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 54/110 (49%), Positives = 67/110 (60%)

Query:     2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILA 61
             T    L+SGV     +++EI++TF L++TVYAT VDPK+G+               NILA
Sbjct:   124 TPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILA 183

Query:    62 GGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFI 111
             GGAF GASMNPA SFGPA+VS  W +HWVYW+GP IG       Y    I
Sbjct:   184 GGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLI 233

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042807 "central vacuole" evidence=IDA

GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA

TAIR|locus:2130883 TIP2;2 "tonoplast intrinsic protein 2;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 55/117 (47%), Positives = 70/117 (59%)

Query:     7 LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
             +++G+GA   VV EIV+TF LVYTVYATA DPK+G+               NILA G F 
Sbjct:   133 VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFS 192

Query:    67 GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIGPNTHEQLPSTD 123
             G SMNPA SFGPAVVS  +   W+YW+GP +G       Y   FIG  ++   P+T+
Sbjct:   193 GGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG--SYAPAPTTE 247

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042807 "central vacuole" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2168953 TIP2;3 "tonoplast intrinsic protein 2;3" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 54/106 (50%), Positives = 63/106 (59%)

Query:     7 LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
             +S+G+GA   VV EIV+TF LVYTVYATA DPK+G+               NILA G F 
Sbjct:   133 VSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFS 192

Query:    67 GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAFIG 112
             G SMNPA SFGPAVVS      W+YW+GP +G       Y   FIG
Sbjct:   193 GGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIG 238

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0006833 "water transport" evidence=IEA

GO:0015250 "water channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0015200 "methylammonium transmembrane transporter activity" evidence=IDA

GO:0051739 "ammonia transmembrane transporter activity" evidence=IGI

GO:0042807 "central vacuole" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-040724-152 aqp4 "aquaporin 4" [Danio rerio (taxid:7955)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 42/105 (40%), Positives = 58/105 (55%)

Query:     6 ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAF 65
             +++  + A +A+V E+++TF LV+TV+AT  DPKR +                 L    +
Sbjct:   151 SVNEEISAGHAIVIELIITFELVFTVFATC-DPKRNDLKGSAALAIGLSVCIGHLFAIPY 209

Query:    66 DGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAF 110
              GASMNPA SFGPAV+   W +HWVYW+GP IG       Y   F
Sbjct:   210 TGASMNPARSFGPAVIMVKWQDHWVYWVGPLIGGILAAAVYEYLF 254

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0005372 "water transmembrane transporter activity" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82598	TIP13_ARATH	No assigned EC number	0.8306	1.0	0.4920	yes	no
Q94CS9	TIP12_ORYSJ	No assigned EC number	0.8181	0.9758	0.4801	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_X1886 SubName- Full=Putative uncharacterized protein; (252 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	124
PLN00027	252	PLN00027, PLN00027, aquaporin TIP; Provisional	5e-73
pfam00230	218	pfam00230, MIP, Major intrinsic protein	3e-41
PLN00166	250	PLN00166, PLN00166, aquaporin TIP2; Provisional	2e-37
cd00333	228	cd00333, MIP, Major intrinsic protein (MIP) superf	5e-32
PLN00167	256	PLN00167, PLN00167, aquaporin TIP5; Provisional	1e-27
TIGR00861	216	TIGR00861, MIP, MIP family channel proteins	3e-26
PLN00182	283	PLN00182, PLN00182, putative aquaporin NIP4; Provi	3e-14
COG0580	241	COG0580, GlpF, Glycerol uptake facilitator and rel	3e-13
PLN00026	298	PLN00026, PLN00026, aquaporin NIP; Provisional	5e-13
PLN00183	274	PLN00183, PLN00183, putative aquaporin NIP7; Provi	1e-12
PLN00184	296	PLN00184, PLN00184, aquaporin NIP1; Provisional	1e-11
PRK05420	231	PRK05420, PRK05420, aquaporin Z; Provisional	1e-06
PTZ00016	294	PTZ00016, PTZ00016, aquaglyceroporin; Provisional	4e-04

>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional

 Score =  217 bits (555), Expect = 5e-73
 Identities = 103/124 (83%), Positives = 111/124 (89%)

Query: 1   ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANIL 60
           ETSAF+LSSGVG WNA VFEIVMTFGLVYTVYATAVDPK+G++GIIAPIAIGFIVGANIL
Sbjct: 129 ETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANIL 188

Query: 61  AGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLP 120
           AGGAFDGASMNPAVSFGPAVVSWTW NHWVYW GP IG  IA + Y + FIG  THEQLP
Sbjct: 189 AGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGSTTHEQLP 248

Query: 121 STDF 124
           +TD+
Sbjct: 249 TTDY 252

Length = 252

>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein

 Score =  135 bits (342), Expect = 3e-41
 Identities = 65/103 (63%), Positives = 80/103 (77%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           A +L+ GV A  A V EI++TF LVYTV+AT  DP+ G++G +AP+AIGF V  N LAGG
Sbjct: 116 ANSLAPGVNAGQAFVVEIILTFQLVYTVFATTDDPRNGSLGHVAPLAIGFAVFLNHLAGG 175

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAY 106
            + GASMNPA SFGPAVV W WD+HWVYW+GP IGAA+AA+ Y
Sbjct: 176 PYTGASMNPARSFGPAVVLWKWDDHWVYWVGPLIGAALAALVY 218

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218

>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional

 Score =  126 bits (319), Expect = 2e-37
 Identities = 69/117 (58%), Positives = 88/117 (75%), Gaps = 2/117 (1%)

Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFD 66
           +++G+GA   VV EIV+TF LVYTVYATA DPK+G++G IAPIAIGFIVGANILA G F 
Sbjct: 133 VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFS 192

Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
           G SMNPA SFGPAVVS  +   W+YW+GP +G A+A + Y   FIG  ++   P+++
Sbjct: 193 GGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG--SYAAAPTSE 247

Length = 250

>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily

 Score =  112 bits (282), Expect = 5e-32
 Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 3/103 (2%)

Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFD 66
            S GV   NA   E + TF LV  V+AT  DP     G +AP+AIG +V A  LAGG   
Sbjct: 123 PSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPIT 182

Query: 67  GASMNPAVSFGPAVVSWT---WDNHWVYWLGPFIGAAIAAIAY 106
           GASMNPA S GPA+ +     W   WVYW+GP IGA   A+ Y
Sbjct: 183 GASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVY 225

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms. Length = 228

>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional

 Score =  101 bits (254), Expect = 1e-27
 Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 16  AVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVS 75
           A V E V+TFGLVYTVYA A DP+RG +G I P+AIG + GAN+LA G F G SMNPA +
Sbjct: 146 ASVLEGVLTFGLVYTVYA-AGDPRRGLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACA 204

Query: 76  FGPAVVSWTWDNHWVYWLGPFIGAAIAAIAY 106
           FG AVV+ ++ N  VYW+GP +G A+A + Y
Sbjct: 205 FGSAVVAGSFKNQAVYWVGPLLGGAVAGLLY 235

Length = 256

>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins

 Score = 97.4 bits (243), Expect = 3e-26
 Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 10  GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGAS 69
           GV +  A   E + T  LV  ++AT  D  R   G  AP+AIG +V    L+ G + G  
Sbjct: 118 GVSSGQAFFVEFIGTAILVLVIFATTDDRNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTG 177

Query: 70  MNPAVSFGPAVVSWT--WDNHWVYWLGPFIGAAIAAIAY 106
           MNPA S GPA+ +    W NHWVYW+GP IGA + A+ Y
Sbjct: 178 MNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216

1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes [Transport and binding proteins, Unknown substrate]. Length = 216

>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional

 Score = 66.9 bits (163), Expect = 3e-14
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 16  AVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVS 75
           A+V EI+++F L++ +   A D +   +G +A IA+G  +  N+   G   GASMNPA S
Sbjct: 161 ALVAEIIISFLLMFVISGVATDSRA--VGELAGIAVGMTIILNVFVAGPISGASMNPARS 218

Query: 76  FGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSV 108
            GPA+V   +   WVY +GPF+G       Y++
Sbjct: 219 LGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNL 251

Length = 283

>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 12/114 (10%)

Query: 3   SAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILA 61
            AF+ S G  +   A + E V TF LV  + A   D         AP+AIG +V A  L+
Sbjct: 124 GAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNANAG--FAPLAIGLLVTAIGLS 181

Query: 62  GGAFDGASMNPAVSFGPAVVSWTWDN---------HWVYWLGPFIGAAIAAIAY 106
            G   G ++NPA   GP +                 W+  +GP +GA + A+ Y
Sbjct: 182 LGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLY 235

Length = 241

>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional

 Score = 63.3 bits (154), Expect = 5e-13
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 2/97 (2%)

Query: 11  VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASM 70
           V    A   E ++TF L++ V A A D +   +G +A IA+G  V  NIL  G   G SM
Sbjct: 184 VSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELAGIAVGATVMLNILVAGPSTGGSM 241

Query: 71  NPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYS 107
           NP  + GPAV +  +   W+Y + P +GA   A  Y+
Sbjct: 242 NPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYT 278

Length = 298

>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional

 Score = 62.2 bits (151), Expect = 1e-12
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 11  VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASM 70
            G  +A   E + TF +++   +    P+  ++G ++   IG  +G  +L  G   G SM
Sbjct: 158 QGCSSAFWVEFIATFIVMFLAASLTSQPQ--SLGHLSGFVIGIAIGLAVLITGPVSGGSM 215

Query: 71  NPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSV 108
           NPA S GPA+VSW + + W+Y   P IGA   A+ + +
Sbjct: 216 NPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHL 253

Length = 274

>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 5   FALSSGVGA-WNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           F  SS VG+   A V E ++TF L++ +   A D +   IG +A +AIG  V  N+L   
Sbjct: 168 FIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA--IGELAGLAIGSTVLLNVLIAA 225

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSV 108
               ASMNP  S GPA+V   +   W+Y + P +GA   A  Y+ 
Sbjct: 226 PVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNT 270

Length = 296

>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 16  AVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVS 75
           A+V E+V+T   +  +   A D KR   G  APIAIG  +    L        S+NPA S
Sbjct: 134 ALVCEVVLTAFFLLVILG-ATD-KRAPAGF-APIAIGLALTLIHLISIPVTNTSVNPARS 190

Query: 76  FGPA--VVSWTWDNHWVYWLGPFIGAAIAAIAYSV 108
            G A  V  W  +  W++W+ P +GA I  + Y +
Sbjct: 191 TGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRL 225

Length = 231

>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 5   FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGA 64
           FA     G + A+  E+++T  L+  + A   DP         P+A+G +V    ++ G 
Sbjct: 175 FATYPREGNFYAIFSELILTAILLLVILAI-TDPNNCPAFNYLPVAVGLLVFVIGISFGG 233

Query: 65  FDGASMNPAVSFGPAVVS--------WTWDNH--WVYWLGPFIGAAIAAIAYSVAFIGP 113
             G ++NPA   GP + S        +T DN+  WV  + PF+GA +    Y   FI P
Sbjct: 234 NTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLY-DKFIPP 291

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	99.96
PLN00027	252	aquaporin TIP; Provisional	99.96
PLN00166	250	aquaporin TIP2; Provisional	99.95
PLN00184	296	aquaporin NIP1; Provisional	99.94
PLN00182	283	putative aquaporin NIP4; Provisional	99.93
PLN00026	298	aquaporin NIP; Provisional	99.93
PLN00167	256	aquaporin TIP5; Provisional	99.93
PTZ00016	294	aquaglyceroporin; Provisional	99.93
PRK05420	231	aquaporin Z; Provisional	99.92
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	99.91
PLN00183	274	putative aquaporin NIP7; Provisional	99.91
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	99.91
COG0580	241	GlpF Glycerol uptake facilitator and related perme	99.9
PLN00026	298	aquaporin NIP; Provisional	99.88
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	99.88
PLN00184	296	aquaporin NIP1; Provisional	99.87
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	99.86
PLN00183	274	putative aquaporin NIP7; Provisional	99.84
PLN00167	256	aquaporin TIP5; Provisional	99.84
PLN00182	283	putative aquaporin NIP4; Provisional	99.84
PLN00166	250	aquaporin TIP2; Provisional	99.83
PRK05420	231	aquaporin Z; Provisional	99.82
PTZ00016	294	aquaglyceroporin; Provisional	99.81
PLN00027	252	aquaporin TIP; Provisional	99.81
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	99.8
COG0580	241	GlpF Glycerol uptake facilitator and related perme	99.77
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	99.77
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	99.76
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	99.75
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	99.71

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.4e-30  Score=193.19  Aligned_cols=118  Identities=53%  Similarity=0.959  Sum_probs=106.9

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      .+.+.++++.+.+|+++.|++.||.|++++++.++|+|++   .+.|+.+|+++...+++.+++||++|||||+|||++.
T Consensus       120 ~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv  196 (238)
T KOG0223|consen  120 LGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVV  196 (238)
T ss_pred             cceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHH
Confidence            3556788999999999999999999999999977888874   7899999999999999999999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcCCCCCcCCCCCC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD  123 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~~~~~~~~~~~  123 (124)
                      .+.|+++|+||+||++|+++++++|++++.++ ++++.++.|
T Consensus       197 ~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~-~~~~~~~~~  237 (238)
T KOG0223|consen  197 YGSWDDHWIYWVGPLLGAILAALIYRLVFIPD-ESEPTKSAD  237 (238)
T ss_pred             hcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc-cccccCccC
Confidence            99999999999999999999999999999985 444444443

>PLN00027 aquaporin TIP; Provisional

Probab=99.96  E-value=3.1e-29  Score=189.17  Aligned_cols=122  Identities=83%  Similarity=1.440  Sum_probs=109.7

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      +.+.+.++.+.+++++.|+++||+|+++++..+.|+|+.....+.|+.+|+.+..++++.+++||+++||||||||++..
T Consensus       131 ~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~  210 (252)
T PLN00027        131 SAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS  210 (252)
T ss_pred             ccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHh
Confidence            45667788899999999999999999999987566654333458899999999999999999999999999999999999


Q ss_pred             cCccccchHhhhhhHHHHHHHHHHHHHhcCCCCCcCCCCCCC
Q 037978           83 WTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTDF  124 (124)
Q Consensus        83 ~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~~~~~~~~~~~~  124 (124)
                      +.|+++|+||+||++|+++++++|++++.+++.+++.++.||
T Consensus       211 ~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~~~~~~~~~~~  252 (252)
T PLN00027        211 WTWTNHWVYWAGPLIGGGIAGLVYELIFIGSTTHEQLPTTDY  252 (252)
T ss_pred             hcchhhhHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCC
Confidence            999999999999999999999999999988788888888887

>PLN00166 aquaporin TIP2; Provisional

Probab=99.95  E-value=1.6e-27  Score=179.64  Aligned_cols=118  Identities=58%  Similarity=1.054  Sum_probs=100.8

Q ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCc
Q 037978            6 ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW   85 (124)
Q Consensus         6 ~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~   85 (124)
                      ...++.+..++++.|+++||+|+++++..+.++|+.......|+.+|+.+...+++.+++||+++|||||||||+..++|
T Consensus       132 ~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~  211 (250)
T PLN00166        132 GVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDF  211 (250)
T ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCC
Confidence            34557789999999999999999999987555554333457899999999999999999999999999999999999999


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcCCCCCcCCCCCCC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTDF  124 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~~~~~~~~~~~~~  124 (124)
                      +++|+||++|++|+++++++|+.++.+.+.+.|.+ |||
T Consensus       212 ~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~~~~~~-~~~  249 (250)
T PLN00166        212 SQIWIYWVGPLVGGALAGLIYGDVFIGSYAAAPTS-EDY  249 (250)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-ccc
Confidence            99999999999999999999999977645554444 344

>PLN00184 aquaporin NIP1; Provisional

Probab=99.94  E-value=5.3e-26  Score=174.86  Aligned_cols=107  Identities=33%  Similarity=0.493  Sum_probs=94.4

Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCccc
Q 037978            8 SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDN   87 (124)
Q Consensus         8 ~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~~~   87 (124)
                      .++.+.+++++.|+++||+|++++++.+.++++  .+...++.+|+++...+++.+++||+++||||||||+++.+.|++
T Consensus       172 ~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~--~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~  249 (296)
T PLN00184        172 SPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA--IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKG  249 (296)
T ss_pred             CcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC--CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccc
Confidence            344689999999999999999999987444432  234789999999999999999999999999999999999999999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcCCCCC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIGPNTH  116 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~~~~~  116 (124)
                      +|+||+||++|+++|+++|++++.++..+
T Consensus       250 ~WVy~vgPilGa~laal~y~~l~~~~~~~  278 (296)
T PLN00184        250 IWIYIVAPTLGAIAGAWVYNTVRYTDKPL  278 (296)
T ss_pred             cchHHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence            99999999999999999999998764443

>PLN00182 putative aquaporin NIP4; Provisional

Probab=99.93  E-value=1.3e-25  Score=171.71  Aligned_cols=106  Identities=34%  Similarity=0.642  Sum_probs=93.5

Q ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcC
Q 037978            5 FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT   84 (124)
Q Consensus         5 ~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~   84 (124)
                      +...|+.+.+++++.|+++|++|++++++.+.+++.  .+...++.+|+++++.+++.+++||+++||||||+|++..+.
T Consensus       150 ~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~  227 (283)
T PLN00182        150 FGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGR  227 (283)
T ss_pred             eeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhcc
Confidence            344566788999999999999999999986445432  234679999999999999999999999999999999999889


Q ss_pred             ccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           85 WDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        85 ~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      |+++|+||++|++|+++|+++|+++..+
T Consensus       228 ~~~~wvY~vap~lGA~lgally~~l~~~  255 (283)
T PLN00182        228 YKGIWVYIVGPFVGIIAGGFVYNLIRFT  255 (283)
T ss_pred             ccceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999854

>PLN00026 aquaporin NIP; Provisional

Probab=99.93  E-value=5.9e-26  Score=174.55  Aligned_cols=105  Identities=34%  Similarity=0.587  Sum_probs=93.1

Q ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCcccc
Q 037978            9 SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNH   88 (124)
Q Consensus         9 ~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~~~~   88 (124)
                      |+++..|+++.|+++||+|++++++.+.|+++  .+...++++|++++..+++.+++||+++||||||+|++..++|+++
T Consensus       182 p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~  259 (298)
T PLN00026        182 PSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAI  259 (298)
T ss_pred             ecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchhe
Confidence            56789999999999999999999976445443  2346789999999999999999999999999999999999999999


Q ss_pred             chHhhhhhHHHHHHHHHHHHHhcCCCC
Q 037978           89 WVYWLGPFIGAAIAAIAYSVAFIGPNT  115 (124)
Q Consensus        89 ~vy~vap~~Ga~~a~~~~~~~~~~~~~  115 (124)
                      |+||+||++|+++|+++|+++..++++
T Consensus       260 wVy~vaPilGAilga~ly~~~~~~~~~  286 (298)
T PLN00026        260 WIYLVAPTLGALAGAGTYTAVKLREED  286 (298)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence            999999999999999999999776433

>PLN00167 aquaporin TIP5; Provisional

Probab=99.93  E-value=3e-25  Score=167.85  Aligned_cols=107  Identities=49%  Similarity=0.912  Sum_probs=94.7

Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCcc
Q 037978            7 LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWD   86 (124)
Q Consensus         7 ~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~~   86 (124)
                      ..++.+..++++.|+++|++|+++++.. .|+|+...+...|+.+|+.+..+.++.+++||+++||||||||++..+.|+
T Consensus       137 ~~~~~s~~~~~~~E~i~T~~L~~~i~~~-~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~  215 (256)
T PLN00167        137 IAEEMTGFGASVLEGVLTFGLVYTVYAA-GDPRRGLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFK  215 (256)
T ss_pred             cCcccchHHHHHHHHHHHHHHHHHHHHh-ccccccCCCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCcc
Confidence            3456678899999999999999999976 565543344578999999999999999999999999999999999998999


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcCCC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIGPN  114 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~~~  114 (124)
                      ++|+||+||++|+++++++|++++.|++
T Consensus       216 ~~wvywvgP~~Ga~l~a~~y~~l~~~~~  243 (256)
T PLN00167        216 NQAVYWVGPLLGGAVAGLLYDNVVFPTQ  243 (256)
T ss_pred             CcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999987743

>PTZ00016 aquaglyceroporin; Provisional

Probab=99.93  E-value=2.8e-25  Score=170.83  Aligned_cols=108  Identities=27%  Similarity=0.424  Sum_probs=93.7

Q ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh--
Q 037978            5 FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS--   82 (124)
Q Consensus         5 ~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~--   82 (124)
                      +.+.|+.+..++++.|+++||+|++++++. .|+|+.......|+.+|+.+..+.++.+++||+++|||||||||++.  
T Consensus       175 f~t~p~~s~~~a~~~E~i~T~iLv~~ila~-~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~  253 (294)
T PTZ00016        175 FATYPREGNFYAIFSELILTAILLLVILAI-TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAI  253 (294)
T ss_pred             eeCCCCccHHHHHHHHHHHHHHHHHHHHHh-ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHH
Confidence            455667889999999999999999999987 66655433457899999999999999999999999999999999986  


Q ss_pred             ----cCcc----ccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           83 ----WTWD----NHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        83 ----~~~~----~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                          ..|+    ++|+||+||++|+++|+++|++++.++
T Consensus       254 ~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~  292 (294)
T PTZ00016        254 LWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL  292 (294)
T ss_pred             hccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence                2454    689999999999999999999998774

>PRK05420 aquaporin Z; Provisional

Probab=99.92  E-value=9.6e-25  Score=162.95  Aligned_cols=100  Identities=29%  Similarity=0.519  Sum_probs=89.8

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCc--cc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW--DN   87 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~--~~   87 (124)
                      ..+..++++.|+++|++|+++++.. .|+|+  .....|+.+|+.+....++.+++||+++||||||||++..++|  ++
T Consensus       128 ~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~--~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~  204 (231)
T PRK05420        128 GYSLLAALVCEVVLTAFFLLVILGA-TDKRA--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQ  204 (231)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHH-hCCCC--CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccc
Confidence            3578999999999999999999987 56554  2357899999999999999999999999999999999998755  58


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +|+||++|++|+++++++|++++++
T Consensus       205 ~wvy~vgP~~Ga~laa~~y~~l~~~  229 (231)
T PRK05420        205 LWLFWVAPIVGAIIGGLIYRLLLEK  229 (231)
T ss_pred             eEEeehHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999776

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=99.91  E-value=2.9e-24  Score=159.13  Aligned_cols=104  Identities=47%  Similarity=0.818  Sum_probs=92.3

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      .++.+.++.+..++++.|+++|++|+++++....++++...+.+.|+.+|+.+....+..+++||+++||||+|+|++..
T Consensus       124 ~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~  203 (227)
T PF00230_consen  124 FATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFS  203 (227)
T ss_dssp             TSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhhhhhhhhhHHHhhhhhhcccccccccccccceeEEEEEeecccccccccccccCchhhcCceeec
Confidence            45678889999999999999999999999988544444333457899999999999999999999999999999999999


Q ss_pred             cCccccchHhhhhhHHHHHHHHHH
Q 037978           83 WTWDNHWVYWLGPFIGAAIAAIAY  106 (124)
Q Consensus        83 ~~~~~~~vy~vap~~Ga~~a~~~~  106 (124)
                      +.|+++|+||++|++|+++|+++|
T Consensus       204 ~~~~~~wvy~~~P~~Ga~~a~~~Y  227 (227)
T PF00230_consen  204 GIWDYFWVYWVGPFIGAILAALLY  227 (227)
T ss_dssp             THHTTTTHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEehHHHHHHHHHhhC
Confidence            999999999999999999999987

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

>PLN00183 putative aquaporin NIP7; Provisional

Probab=99.91  E-value=3.8e-24  Score=163.09  Aligned_cols=107  Identities=29%  Similarity=0.583  Sum_probs=92.9

Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCcc
Q 037978            7 LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWD   86 (124)
Q Consensus         7 ~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~~   86 (124)
                      ..|..+.+++++.|+++|++|++++++. .+++++ .+...++.+|+++++.+++.+++||+++||||+|+|++.+..|+
T Consensus       154 ~~p~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~-~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~  231 (274)
T PLN00183        154 TKPAQGCSSAFWVEFIATFIVMFLAASL-TSQPQS-LGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFK  231 (274)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhee-eccccC-CCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChh
Confidence            4455678999999999999999999976 343322 23457899999999999999999999999999999999998999


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcCCCC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIGPNT  115 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~~~~  115 (124)
                      ++|+||++|++|+++++++|++++.+...
T Consensus       232 ~~wvy~vapilGailaa~l~~~l~~~~~~  260 (274)
T PLN00183        232 DIWIYITAPTIGAVAGALMFHLLRLRTQP  260 (274)
T ss_pred             heehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999877443

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=99.91  E-value=7e-24  Score=157.75  Aligned_cols=104  Identities=48%  Similarity=0.778  Sum_probs=91.4

Q ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc
Q 037978            5 FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW   83 (124)
Q Consensus         5 ~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~   83 (124)
                      +.+.++.+..++++.|+++|++|+++++... ++++. ......++.+|+++...+++.+++||+++|||||+++++.++
T Consensus       121 ~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~-~~~~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~  199 (228)
T cd00333         121 TYPSPGVSNGNAFFVEFIGTFILVLVVFATT-DDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTG  199 (228)
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHHHHHc-cccccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhc
Confidence            3456678999999999999999999999874 43332 234578999999999999999999999999999999999998


Q ss_pred             C---ccccchHhhhhhHHHHHHHHHHHHH
Q 037978           84 T---WDNHWVYWLGPFIGAAIAAIAYSVA  109 (124)
Q Consensus        84 ~---~~~~~vy~vap~~Ga~~a~~~~~~~  109 (124)
                      .   |+++|+||++|++|+++|+++|+++
T Consensus       200 ~~~~~~~~~vy~vap~lGai~aa~l~~~~  228 (228)
T cd00333         200 LARHWHYFWVYWVGPLIGAIAGALVYDYV  228 (228)
T ss_pred             cccccceeehhhhHHHHHHHHHHHHHHhC
Confidence            5   9999999999999999999999864

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=99.90  E-value=3.6e-23  Score=154.62  Aligned_cols=108  Identities=32%  Similarity=0.477  Sum_probs=91.7

Q ss_pred             CCcccCCCC-ccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHh
Q 037978            2 TSAFALSSG-VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAV   80 (124)
Q Consensus         2 ~~~~~~~~~-~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l   80 (124)
                      .|.+++.|+ .+..++++.|+++||+|++.+++...|++.  +..+.|+.+|+.++.++++.++.||..+|||||+|||+
T Consensus       123 ~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~--~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl  200 (241)
T COG0580         123 LGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA--NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRL  200 (241)
T ss_pred             ccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc--cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHH
Confidence            345556665 388999999999999999999997444443  33599999999999999999999999999999999999


Q ss_pred             hhc---------CccccchHhhhhhHHHHHHHHHHHHHhc
Q 037978           81 VSW---------TWDNHWVYWLGPFIGAAIAAIAYSVAFI  111 (124)
Q Consensus        81 ~~~---------~~~~~~vy~vap~~Ga~~a~~~~~~~~~  111 (124)
                      ...         ++.|+|+||++|++|+++|+++|+.++.
T Consensus       201 ~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~  240 (241)
T COG0580         201 AHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG  240 (241)
T ss_pred             HHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence            643         2248999999999999999999998764

>PLN00026 aquaporin NIP; Provisional

Probab=99.88  E-value=1.6e-22  Score=155.62  Aligned_cols=107  Identities=21%  Similarity=0.248  Sum_probs=90.2

Q ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CCCc-hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            6 ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR-G-NIGI-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         6 ~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~-~~~~-~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      .+.++.+.+|.+++|+++||+|++++++.+..+++ . .... ..++.+|+++++.+++++++||+|+|||||+++++.+
T Consensus        63 ~~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g  142 (298)
T PLN00026         63 LPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALR  142 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhC
Confidence            35567788999999999999999999975443221 1 1111 2468999999999999999999999999999999988


Q ss_pred             c-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           83 W-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        83 ~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      + .|.+.|+||++|++|+++|+++++.++.+
T Consensus       143 ~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~  173 (298)
T PLN00026        143 HFPWKHVPAYIAAQVSASICASFALKGVFHP  173 (298)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7 79999999999999999999999998865

>TIGR00861 MIP MIP family channel proteins

Probab=99.88  E-value=1.3e-22  Score=149.83  Aligned_cols=98  Identities=44%  Similarity=0.801  Sum_probs=86.0

Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc--C
Q 037978            8 SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW--T   84 (124)
Q Consensus         8 ~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~--~   84 (124)
                      .++.+.+++++.|+++|++|+++++.. .+++++ ......++.+|+.+...+++.+++||+++|||||+++++.++  +
T Consensus       116 ~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~  194 (216)
T TIGR00861       116 AAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAG  194 (216)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcccc
Confidence            456789999999999999999999986 443332 223378999999999999999999999999999999999987  8


Q ss_pred             ccccchHhhhhhHHHHHHHHHH
Q 037978           85 WDNHWVYWLGPFIGAAIAAIAY  106 (124)
Q Consensus        85 ~~~~~vy~vap~~Ga~~a~~~~  106 (124)
                      |+++|+||++|++|+++++++|
T Consensus       195 ~~~~~vy~vap~~Ga~~a~~~y  216 (216)
T TIGR00861       195 WGNHWVYWVGPIIGAILGALVY  216 (216)
T ss_pred             ccceeHHHHHHHHHHHHHHHhC
Confidence            9999999999999999998865

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>PLN00184 aquaporin NIP1; Provisional

Probab=99.87  E-value=1.5e-21  Score=150.28  Aligned_cols=103  Identities=25%  Similarity=0.279  Sum_probs=87.3

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCc--hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKR-GNIGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW   85 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~~~~~--~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~   85 (124)
                      +.+.++.+++|+++||+|++++++.+..... .....  ..++.+|+++++.+++++++||+|+|||||+++++.++ .|
T Consensus        50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~  129 (296)
T PLN00184         50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL  129 (296)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence            4567899999999999999999987532221 11112  34677799999999999999999999999999999987 89


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .+.|+||++|++|+++|+++++.++..
T Consensus       130 ~~~~~YiiaQllGA~lga~~~~~l~~~  156 (296)
T PLN00184        130 KQVPAYVISQVIGSTLAAATLRLLFGL  156 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999998854

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.86  E-value=3.5e-22  Score=152.00  Aligned_cols=108  Identities=26%  Similarity=0.361  Sum_probs=97.7

Q ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc
Q 037978            4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW   83 (124)
Q Consensus         4 ~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~   83 (124)
                      ++.++|+++.+++|+.|+++|.+|+..+++. +|+|+..+..+.|+.+|+.+.++-++.|..+|..+|||||||||++..
T Consensus       158 aTyP~p~ls~~n~F~DqfigTa~L~~~l~aI-~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~  236 (316)
T KOG0224|consen  158 ATYPAPHLSLWNGFFDQFIGTAMLVLCLFAI-TDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTS  236 (316)
T ss_pred             eecCchHhhhhHHHHHHHHHHHHHHhheeEE-ecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHH
Confidence            4678999999999999999999999999987 788877777899999999999999999999999999999999999932


Q ss_pred             -----------CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           84 -----------TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        84 -----------~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                                 .-.+.|+.|++|++|+++++++|++++.-
T Consensus       237 ~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~  276 (316)
T KOG0224|consen  237 IAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGF  276 (316)
T ss_pred             HHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeec
Confidence                       11477999999999999999999998755

>PLN00183 putative aquaporin NIP7; Provisional

Probab=99.84  E-value=1.4e-20  Score=143.53  Aligned_cols=110  Identities=18%  Similarity=0.251  Sum_probs=91.1

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCch--HHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHH
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN-IGII--APIAIGFIVGANILAGGAFDGASMNPAVSFGPA   79 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~-~~~~--~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~   79 (124)
                      ||-.-.-+.+.++++++|+++||++++++++.+.+++... ....  .++.+|+++.+.+++.+++||+|+||||+++++
T Consensus        34 ~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~  113 (274)
T PLN00183         34 GCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFA  113 (274)
T ss_pred             cccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHH
Confidence            3333344567889999999999999999998755433211 1122  577999999999999999999999999999999


Q ss_pred             hhhc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           80 VVSW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        80 l~~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +.++ .|.+.|+||++|++|+++|+.+++.++..
T Consensus       114 l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~  147 (274)
T PLN00183        114 TFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGV  147 (274)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9987 79999999999999999999999888754

>PLN00167 aquaporin TIP5; Provisional

Probab=99.84  E-value=2.5e-20  Score=141.07  Aligned_cols=104  Identities=23%  Similarity=0.430  Sum_probs=88.5

Q ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCC--C--C----CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHh
Q 037978            9 SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR--G--N----IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAV   80 (124)
Q Consensus         9 ~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~--~--~----~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l   80 (124)
                      ..-+.++.+++|+++||+|++++++++.+.+.  +  .    .....++.+|+++++.+++++++||+|+||||++++++
T Consensus        17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~   96 (256)
T PLN00167         17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV   96 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence            34567899999999999999999988553321  1  1    11257899999999999999999999999999999999


Q ss_pred             hhc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           81 VSW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        81 ~~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .++ .|.+.|+||++|++|+++|+.+++.++.+
T Consensus        97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~  129 (256)
T PLN00167         97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVG  129 (256)
T ss_pred             hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence            877 79999999999999999999999888654

>PLN00182 putative aquaporin NIP4; Provisional

Probab=99.84  E-value=2e-20  Score=143.30  Aligned_cols=103  Identities=20%  Similarity=0.221  Sum_probs=87.1

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CC--CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NI--GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW   85 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~~--~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~   85 (124)
                      +.+.++.+++|+++||+|+++.++++.+.+.. ..  ....++++|+++++.+++++++||+|+||||++++++.++ .|
T Consensus        38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~  117 (283)
T PLN00182         38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW  117 (283)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence            45677999999999999999999875542211 11  1234668999999999999999999999999999999988 89


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .+.|+||++|++|+++|+++.+.++..
T Consensus       118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~  144 (283)
T PLN00182        118 YQVPLYIGAQLTGSLLASLTLRLMFNV  144 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999988743

>PLN00166 aquaporin TIP2; Provisional

Probab=99.83  E-value=3.8e-20  Score=139.65  Aligned_cols=103  Identities=21%  Similarity=0.347  Sum_probs=87.1

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCC-C---CC--CCCc--hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDP-K---RG--NIGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~-~---~~--~~~~--~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      +.+.+|++++|+++||+|+++.++++.+. +   ++  ....  ..++.+|+++++.+++++++||+|+||||++++++.
T Consensus        14 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~   93 (250)
T PLN00166         14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIG   93 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHh
Confidence            46678999999999999999999875431 1   11  1112  367889999999999999999999999999999998


Q ss_pred             hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ++ .|.+.|+||++|++|+++|+.+++.++.+
T Consensus        94 g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~  125 (250)
T PLN00166         94 GNITIITGFFYWIAQCLGSIVACLLLVFVTNG  125 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            66 68899999999999999999999988754

>PRK05420 aquaporin Z; Provisional

Probab=99.82  E-value=8.1e-20  Score=136.46  Aligned_cols=99  Identities=25%  Similarity=0.244  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CC-Cc-hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccccc
Q 037978           14 WNAVVFEIVMTFGLVYTVYATAVDPKR-G-NI-GI-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH   88 (124)
Q Consensus        14 ~~~~~~E~i~T~~lv~~~~~~~~~~~~-~-~~-~~-~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~   88 (124)
                      .|.+++|+++|++|+++.++.+...++ + +. +. ..++.+|+++++.+++++++||+|+|||||+++++.++ +|.+.
T Consensus         2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~   81 (231)
T PRK05420          2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL   81 (231)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence            588999999999999999887443221 1 11 11 24789999999999999999999999999999999987 89999


Q ss_pred             chHhhhhhHHHHHHHHHHHHHhcC
Q 037978           89 WVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        89 ~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      |+||++|++|+++|+.+.+.++.+
T Consensus        82 ~~Y~~aQ~lGa~~ga~l~~~~~~~  105 (231)
T PRK05420         82 VPYIIAQVVGGIAAAAVLYLIASG  105 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999888877654

>PTZ00016 aquaglyceroporin; Provisional

Probab=99.81  E-value=1.6e-19  Score=139.04  Aligned_cols=101  Identities=24%  Similarity=0.326  Sum_probs=86.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--C-CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDPKRG--N-IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN   87 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~--~-~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~   87 (124)
                      +.++.+++|+++||+|+++.++++.+....  . .....++.+|+++++.+++.+++||+|+||||++++++.++ .|.+
T Consensus        48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~  127 (294)
T PTZ00016         48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK  127 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence            456899999999999999999875432211  1 11246788999999999999999999999999999999988 8999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .|+||++|++|+++|+.+.+.++.+
T Consensus       128 ~~~YiiaQ~lGa~~ga~ll~~~~~~  152 (294)
T PTZ00016        128 LPGYFVAQLLGAFVGAACVYGLYYG  152 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            9999999999999999998888765

>PLN00027 aquaporin TIP; Provisional

Probab=99.81  E-value=2.7e-19  Score=135.17  Aligned_cols=102  Identities=22%  Similarity=0.343  Sum_probs=85.0

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCCCc--hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVD------PKRGNIGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~------~~~~~~~~--~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      .+.+|++++|+++||+|++++++.+..      +++.....  ..++.+|+++++.+++++++||+|+||||++++++.+
T Consensus        17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g   96 (252)
T PLN00027         17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG   96 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence            346789999999999999999987421      11111112  4689999999999999999999999999999999877


Q ss_pred             c-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           83 W-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        83 ~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      + .|.+.|+||++|++|+++|+.+++.+...
T Consensus        97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~  127 (252)
T PLN00027         97 NITLLRGILYWIAQLLGSVVACLLLKFSTGG  127 (252)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6 68899999999999999999999887643

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=99.80  E-value=1.3e-19  Score=134.88  Aligned_cols=98  Identities=24%  Similarity=0.308  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCC--CC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccccc
Q 037978           15 NAVVFEIVMTFGLVYTVYATAVDPKRGN--IG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW   89 (124)
Q Consensus        15 ~~~~~E~i~T~~lv~~~~~~~~~~~~~~--~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~~   89 (124)
                      |.++.|+++||+++++.+++..+.+.+.  ..  ...++.+|+.+...+++.+++||+|+||||++++++.++ +|.+.|
T Consensus         1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~   80 (228)
T cd00333           1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI   80 (228)
T ss_pred             ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence            3578999999999999999866544221  11  256899999999999999999999999999999999987 799999


Q ss_pred             hHhhhhhHHHHHHHHHHHHHhcC
Q 037978           90 VYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        90 vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +||++|++|+++++.+++.++.+
T Consensus        81 ~y~~aq~~Ga~~~~~~~~~~~~~  103 (228)
T cd00333          81 PYIIAQLLGAILGAALLYGLYYG  103 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999988766

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=99.77  E-value=8.6e-19  Score=131.12  Aligned_cols=103  Identities=24%  Similarity=0.289  Sum_probs=87.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCC---C--CCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVDP---K--RGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-   83 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~---~--~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-   83 (124)
                      .+..+.+++|+++|++|++..++++...   +  ....+ ....+.+|+.+.+.+++.+++||+|+|||+|++.++.++ 
T Consensus         2 ~~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~f   81 (241)
T COG0580           2 TTLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRF   81 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCC
Confidence            3567788999999999999988775532   1  11111 247899999999999999999999999999999999998 


Q ss_pred             CccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           84 TWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        84 ~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      +|++...||++|++|+++|+.+...++.++
T Consensus        82 p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~  111 (241)
T COG0580          82 PWRKVLPYIVAQVLGAFAGAALLYLLYYGK  111 (241)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            899999999999999999999888888773

>TIGR00861 MIP MIP family channel proteins

Probab=99.77  E-value=1.7e-18  Score=127.92  Aligned_cols=95  Identities=24%  Similarity=0.253  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC--C---CC---CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccccc
Q 037978           19 FEIVMTFGLVYTVYATAVDPK--R---GN---IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW   89 (124)
Q Consensus        19 ~E~i~T~~lv~~~~~~~~~~~--~---~~---~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~~   89 (124)
                      +|+++|++|+++.++++.+.+  +   ..   .....++.+|+.+...+++.+++||+|+||||++++++.++ +|.+.|
T Consensus         1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~   80 (216)
T TIGR00861         1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP   80 (216)
T ss_pred             CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence            499999999999999866521  1   11   11246889999999999999999999999999999999988 899999


Q ss_pred             hHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           90 VYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        90 vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      +||++|++|+++++.+++.++.++
T Consensus        81 ~y~~aQ~~Ga~~~~~~~~~~~~~~  104 (216)
T TIGR00861        81 VYIVAQLIGAILGAALLYGLTSGL  104 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccc
Confidence            999999999999999999888763

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.76  E-value=3.3e-18  Score=128.04  Aligned_cols=106  Identities=25%  Similarity=0.272  Sum_probs=91.8

Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCC--CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc
Q 037978            7 LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR-GNI--GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW   83 (124)
Q Consensus         7 ~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~~~--~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~   83 (124)
                      .....+.+|++++||++|++++|..++++...++ ...  .....+..|+++++.+++.+++||+|+|||++++..+.++
T Consensus         4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~   83 (238)
T KOG0223|consen    4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK   83 (238)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC
Confidence            3456788999999999999999999998654332 122  2356889999999999999999999999999999999988


Q ss_pred             -CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           84 -TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        84 -~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                       ++.+...||++|++|+++|+.+.+.+.++
T Consensus        84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~  113 (238)
T KOG0223|consen   84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPG  113 (238)
T ss_pred             CcHHHhHHHHHHHHHHHHHHHHHHheecCc
Confidence             68899999999999999999999998877

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.75  E-value=2.1e-18  Score=131.43  Aligned_cols=101  Identities=27%  Similarity=0.386  Sum_probs=85.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDPKR--GNIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD   86 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~--~~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~   86 (124)
                      ...|.+++||++|++|++..++++.+..-  ...+  .-..+++|++++..+++.+.+||+|+|||+|++..+.++ .|.
T Consensus        30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~  109 (316)
T KOG0224|consen   30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK  109 (316)
T ss_pred             HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence            46789999999999999998887543211  1112  234689999999999999999999999999999999998 899


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +..+|.++|++||++|+.....+|.+
T Consensus       110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d  135 (316)
T KOG0224|consen  110 KFPVYVLAQFIGAFLGAATVYGLYYD  135 (316)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887777655

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=99.71  E-value=1.4e-17  Score=123.40  Aligned_cols=102  Identities=25%  Similarity=0.413  Sum_probs=84.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCC---C----CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAV--DPKRGN---I----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~--~~~~~~---~----~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      .+.+|.+++|+++|+++++..+++..  +++..+   .    ....++.+|+++...+++.+++||+|+|||+|++..+.
T Consensus         5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~   84 (227)
T PF00230_consen    5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT   84 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence            56799999999999999999887533  222111   1    12356678999999999999999999999999999999


Q ss_pred             hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ++ +|.+...|+++|++|+++|+.+.+.++++
T Consensus        85 g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~  116 (227)
T PF00230_consen   85 GRISWKKAIVYIIAQFLGAFLGALLVYALYPD  116 (227)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTH
T ss_pred             eeecccceeeEEeeccccccccccchhhcccC
Confidence            88 78999999999999999999999888766

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
2d57_A	301	Double Layered 2d Crystal Structure Of Aquaporin-4		2e-14
3iyz_A	340	Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res		2e-14
2zz9_A	301	Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso		2e-14
3gd8_A	223	Crystal Structure Of Human Aquaporin 4 At 1.8 And I		3e-14
1ymg_A	263	The Channel Architecture Of Aquaporin O At 2.2 Angs		4e-11
2b6o_A	263	Electron Crystallographic Structure Of Lens Aquapor		4e-11
1sor_A	235	Aquaporin-0 Membrane Junctions Reveal The Structure		4e-11
3m9i_A	220	Electron Crystallographic Structure Of Lens Aquapor		5e-11
1fqy_A	269	Structure Of Aquaporin-1 At 3.8 A Resolution By Ele		5e-10
3d9s_A	266	Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St		7e-10
1j4n_A	271	Crystal Structure Of The Aqp1 Water Channel Length		2e-09
2b5f_A	303	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
3cn5_A	304	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
1z98_A	281	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
3cn6_A	304	Crystal Structure Of The Spinach Aquaporin Sopip2;1		3e-08
3cll_A	300	Crystal Structure Of The Spinach Aquaporin Sopip2;1		4e-08
2w1p_A	279	1.4 Angstrom Crystal Structure Of P.Pastoris Aquapo		4e-06
2evu_A	246	Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut		1e-04

>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 13  AWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGASMNP 72
           A + ++ E+++TF LV+T++A+  D KR +                 L    + GASMNP
Sbjct: 134 AGHGLLVELIITFQLVFTIFASC-DSKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNP 192
Query: 73  AVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAF 110
           A SFGPAV+   W+NHW+YW+GP IG       Y   F
Sbjct: 193 ARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 230

>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 13  AWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGASMNP 72
           A + ++ E+++TF LV+T++A+  D KR +                 L    + GASMNP
Sbjct: 173 AGHGLLVELIITFQLVFTIFASC-DDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNP 231
Query: 73  AVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAF 110
           A SFGPAV+   W+NHW+YW+GP IG       Y   F
Sbjct: 232 ARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 269

>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 13  AWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGASMNP 72
           A + ++ E+++TF LV+T++A+  D KR +                 L    + GASMNP
Sbjct: 134 AGHGLLVELIITFQLVFTIFASC-DDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNP 192
Query: 73  AVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAF 110
           A SFGPAV+   W+NHW+YW+GP IG       Y   F
Sbjct: 193 ARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 230

>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 13  AWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGASMNP 72
           A + ++ E+++TF LV+T++A+  D KR +                 L    + GASMNP
Sbjct: 125 AGHGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNP 183
Query: 73  AVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXYSVAF 110
           A SFGPAV+   W+NHW+YW+GP IG       Y   F
Sbjct: 184 ARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 221

>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
           L  GV    A + EI +T   V  ++AT  D +R                   L G  + 
Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYT 179
Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIG 98
           GA MNPA SF PA+++  + NHWVYW+GP IG
Sbjct: 180 GAGMNPARSFAPAILTRNFTNHWVYWVGPVIG 211

>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
           L  GV    A + EI +T   V  ++AT  D +R                   L G  + 
Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYT 179
Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIG 98
           GA MNPA SF PA+++  + NHWVYW+GP IG
Sbjct: 180 GAGMNPARSFAPAILTRNFTNHWVYWVGPVIG 211

>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
           L  GV    A + EI +T   V  ++AT  D +R                   L G  + 
Sbjct: 117 LHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYT 175
Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIG 98
           GA MNPA SF PA+++  + NHWVYW+GP IG
Sbjct: 176 GAGMNPARSFAPAILTRNFTNHWVYWVGPVIG 207

>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
           L  GV    A + EI +T   V  ++AT  D +R                   L G  + 
Sbjct: 115 LHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYT 173
Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIG 98
           GA MNPA SF PA+++  + NHWVYW+GP IG
Sbjct: 174 GAGMNPARSFAPAILTRNFTNHWVYWVGPVIG 205

>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 7   LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFD 66
           L+ GV +   +  EI+ T  LV  V AT  D +R +                 L    + 
Sbjct: 129 LADGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187
Query: 67  GASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXY 106
           G  +NPA SFG AV++  + NHW++W+GPFIG       Y
Sbjct: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIY 227

>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 15  NAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGASMNPAV 74
            A+V E+++TF L   ++A+  D +R +                 L G  F G SMNPA 
Sbjct: 131 QAMVVELILTFQLALCIFAS-TDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPAR 189
Query: 75  SFGPAVVSWTWD-NHWVYWLGPFIGXXXXXXXY 106
           SFGPAVV   +   HWV+W+GP +G       Y
Sbjct: 190 SFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILY 222

>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 6   ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAF 65
           AL+ GV +   +  EI+ T  LV  V AT  D +R +                 L    +
Sbjct: 130 ALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSVALGHLLAIDY 188
Query: 66  DGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGXXXXXXXY 106
            G  +NPA SFG +V++  + +HW++W+GPFIG       Y
Sbjct: 189 TGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIY 229

>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 20  EIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNI----LAGGAFDGASMNPAVS 75
           EI+ TF LVYTV+ +A DPKR                  +    LA     G  +NPA S
Sbjct: 168 EIIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARS 226
Query: 76  FGPAVV---SWTWDNHWVYWLGPFIG 98
           FG AV+   +  WD+ W++W+GPFIG
Sbjct: 227 FGAAVIFNSNKVWDDQWIFWVGPFIG 252

>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 20  EIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNI----LAGGAFDGASMNPAVS 75
           EI+ TF LVYTV+ +A DPKR                  +    LA     G  +NPA S
Sbjct: 191 EIIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARS 249
Query: 76  FGPAVV---SWTWDNHWVYWLGPFIG 98
           FG AV+   +  WD+ W++W+GPFIG
Sbjct: 250 FGAAVIFNSNKVWDDQWIFWVGPFIG 275

>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 20  EIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNI----LAGGAFDGASMNPAVS 75
           EI+ TF LVYTV+ +A DPKR                  +    LA     G  +NPA S
Sbjct: 168 EIIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARS 226
Query: 76  FGPAVV---SWTWDNHWVYWLGPFIG 98
           FG AV+   +  WD+ W++W+GPFIG
Sbjct: 227 FGAAVIFNSNKVWDDQWIFWVGPFIG 252

>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 20  EIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNI----LAGGAFDGASMNPAVS 75
           EI+ TF LVYTV+ +A DPKR                  +    LA     G  +NPA S
Sbjct: 191 EIIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARS 249
Query: 76  FGPAVV---SWTWDNHWVYWLGPFIG 98
           FG AV+   +  WD+ W++W+GPFIG
Sbjct: 250 FGAAVIFNSNKVWDDQWIFWVGPFIG 275

>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 20  EIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNI----LAGGAFDGASMNPAVS 75
           EI+ TF LVYTV+ +A DPKR                  +    LA     G  +NPA S
Sbjct: 187 EIIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARS 245
Query: 76  FGPAVV---SWTWDNHWVYWLGPFIG 98
           FG AV+   +  WD+ W++W+GPFIG
Sbjct: 246 FGAAVIFNSNKVWDDQWIFWVGPFIG 271

>pdb|2W1P|A Chain A, 1.4 Angstrom Crystal Structure Of P.Pastoris Aquaporin, Aqy1, In A Closed Conformation At Ph 8.0 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 65  FDGASMNPAVSFGPAVVSWTWDN-HWVYWLGPFIG 98
           + GA +NPA SFGPAV + ++ N HW+YWLGP +G
Sbjct: 218 YTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILG 252

>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 10  GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNXXXXXXXXXXXXXXXNILAGGAFDGAS 69
           G+  W A++ E+V TF L+ T+   AVD +                    L  G   G+S
Sbjct: 140 GISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTL--GNISGSS 197
Query: 70  MNPAVSFGPAVVSWT------WDNHWVYWLGPFIGXXXXXXXYS 107
           +NPA +FGP +          W+ + +Y +GP +G       Y 
Sbjct: 198 LNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQ 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	1e-43
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	3e-04
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	2e-43
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	5e-43
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	6e-04
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	1e-42
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	2e-05
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	1e-41
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	4e-41
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	2e-40
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	1e-05
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	7e-40
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	3e-37
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	2e-35
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	7e-32
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	2e-16
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	5e-16

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340

 Score =  144 bits (365), Expect = 1e-43
 Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
              +   + A + ++ E+++TF LV+T++A+  D KR ++     +AIGF V    L   
Sbjct: 164 VTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDKRTDVTGSVALAIGFSVAIGHLFAI 222

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPSTD 123
            + GASMNPA SFGPAV+   W+NHW+YW+GP IGA +A   Y   F  P+   +    +
Sbjct: 223 NYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFC-PDVELKRRLKE 281

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 8/97 (8%)

Query: 14  WNAVVFEIVMTFGLVYTVYATAV------DPKRGNIGIIAPIAIGFIVGANILAGGAFDG 67
           W AV  E +     V     + +      +P   ++ +I+ +  G  +   +   G   G
Sbjct: 52  WKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLIS-LCFGLSIATMVQCFGHISG 110

Query: 68  ASMNPAVSFGPAVVS-WTWDNHWVYWLGPFIGAAIAA 103
             +NPAV+         +      Y     +GA I A
Sbjct: 111 GHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGA 147

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271

 Score =  142 bits (359), Expect = 2e-43
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
             AL+ GV +   +  EI+ T  LV  V AT  D +R ++G   P+AIGF V    L   
Sbjct: 128 LNALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSVALGHLLAI 186

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113
            + G  +NPA SFG +V++  + +HW++W+GPFIGAA+A + Y       
Sbjct: 187 DYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPR 236

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301

 Score =  142 bits (359), Expect = 5e-43
 Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
              +   + A + ++ E+++TF LV+T++A+  D KR ++     +AIGF V    L   
Sbjct: 125 VTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDKRTDVTGSVALAIGFSVAIGHLFAI 183

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFI 111
            + GASMNPA SFGPAV+   W+NHW+YW+GP IGA +A   Y   F 
Sbjct: 184 NYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFC 231

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301

 Score = 37.0 bits (86), Expect = 6e-04
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 8/97 (8%)

Query: 14  WNAVVFEIVMTFGLVYTVYATAV------DPKRGNIGIIAPIAIGFIVGANILAGGAFDG 67
           W AV  E +     V     + +      +P   ++ +I+ +  G  +   +   G   G
Sbjct: 13  WKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLIS-LCFGLSIATMVQCFGHISG 71

Query: 68  ASMNPAVSFGPAVVS-WTWDNHWVYWLGPFIGAAIAA 103
             +NPAV+         +      Y     +GA I A
Sbjct: 72  GHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGA 108

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263

 Score =  140 bits (354), Expect = 1e-42
 Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
              L  GV    A + EI +T   V  ++AT  + + G +G    +A+GF +    L G 
Sbjct: 118 LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGS-VALAVGFSLTLGHLFGM 176

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFI 111
            + GA MNPA SF PA+++  + NHWVYW+GP IGA + ++ Y     
Sbjct: 177 YYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLF 224

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 2/95 (2%)

Query: 11  VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAP-IAIGFIVGANILAGGAFDGAS 69
              W A+  E   T   V+     ++    G + ++   +A G  +   + A G   GA 
Sbjct: 7   ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 66

Query: 70  MNPAVSFGPAVVS-WTWDNHWVYWLGPFIGAAIAA 103
           +NPAV+F   V S  +      Y +   +GA   A
Sbjct: 67  VNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGA 101

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223

 Score =  136 bits (344), Expect = 1e-41
 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 1/107 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
              +   + A + ++ E+++TF LV+T++A+  D KR ++     +AIGF V    L   
Sbjct: 116 VTMVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAI 174

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAF 110
            + GASMNPA SFGPAV+   W+NHW+YW+GP IGA +A   Y   F
Sbjct: 175 NYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 221

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304

 Score =  137 bits (346), Expect = 4e-41
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVD---PKRGNIGIIAPIAIGFIVGANIL 60
           A +++ G     A+  EI+ TF LVYTV++        +  ++ I+AP+ IGF V    L
Sbjct: 175 ANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHL 234

Query: 61  AGGAFDGASMNPAVSFGPAVV---SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113
           A     G  +NPA SFG AV+   +  WD+ W++W+GPFIGAA+AA  +       
Sbjct: 235 ATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266

 Score =  134 bits (339), Expect = 2e-40
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
             AL++      A+V E+++TF L   ++A+  D +R +      ++IG  V    L G 
Sbjct: 120 VNALNNNTTQGQAMVVELILTFQLALCIFAST-DSRRTSPVGSPALSIGLSVTLGHLVGI 178

Query: 64  AFDGASMNPAVSFGPAVVSWTW-DNHWVYWLGPFIGAAIAAIAYSVAFIGPN 114
            F G SMNPA SFGPAVV   +   HWV+W+GP +GA +AAI Y       +
Sbjct: 179 YFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 2/95 (2%)

Query: 11  VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAP-IAIGFIVGANILAGGAFDGAS 69
           V    AV  E + T   V+    +A+        I+   +A G  +G    A G   G  
Sbjct: 9   VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 68

Query: 70  MNPAVSFGPAVVS-WTWDNHWVYWLGPFIGAAIAA 103
           +NPA++    V +  +    + Y     +GA   A
Sbjct: 69  INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGA 103

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279

 Score =  133 bits (336), Expect = 7e-40
 Identities = 42/122 (34%), Positives = 55/122 (45%), Gaps = 4/122 (3%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           A AL  G      +  E   T  L  TV   AV+  R      AP  IG  +    L   
Sbjct: 159 ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA--TWFAPFVIGIALLIAHLICI 216

Query: 64  AFDGASMNPAVSFGPAVVSWTWDN-HWVYWLGPFIGAAIAAIAYSVAFIGPNTHEQLPST 122
            + GA +NPA SFGPAV + ++ N HW+YWLGP +GA +A   + +     N     P  
Sbjct: 217 YYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKW-LNYQTTNPGQ 275

Query: 123 DF 124
           D 
Sbjct: 276 DS 277

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234

 Score =  125 bits (316), Expect = 3e-37
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 9   SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGA 68
            G    +A+V E+V++ G +  ++       +      APIAIG       L        
Sbjct: 130 GGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLACTLIHLISIPVTNT 186

Query: 69  SMNPAVSFGPAVVS--WTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPN 114
           S+NPA S   A+    W  +  W +W+ P +G  I  + Y       +
Sbjct: 187 SVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 234

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256

 Score =  121 bits (305), Expect = 2e-35
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
                 G    +A++ EI++T   +  +  +            APIAIG  +    L   
Sbjct: 148 GEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAGF---APIAIGLALTLIHLISI 204

Query: 64  AFDGASMNPAVSFGPAVVS--WTWDNHWVYWLGPFIGAAIAAIAYSVAF 110
                S+NPA S G A+    W     W++WL P +G A  A+ + +  
Sbjct: 205 PVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246

 Score =  111 bits (280), Expect = 7e-32
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 8/113 (7%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           A A   G+  W A++ E+V TF L+ T+   AVD +       A I IG  V   I   G
Sbjct: 134 ATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER--APKGFAGIIIGLTVAGIITTLG 191

Query: 64  AFDGASMNPAVSFGPAVVSWT------WDNHWVYWLGPFIGAAIAAIAYSVAF 110
              G+S+NPA +FGP +          W+ + +Y +GP +GA +AA+ Y    
Sbjct: 192 NISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLT 244

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258

 Score = 71.1 bits (175), Expect = 2e-16
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 12/131 (9%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNI-GIIAPIAIGFIVGANILAG 62
             + +  +    A   E+++T  L+  +     +   G    +     +G I+    +  
Sbjct: 125 ETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITF 184

Query: 63  GAFDGASMNPAVSFGPAVVSWT----------WDNHWVYWLGPFIGAAIAAIAYSVAFIG 112
           G   G ++NP+   G   +S                WV  + P +G+ +    Y    I 
Sbjct: 185 GGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK-VIC 243

Query: 113 PNTHEQLPSTD 123
           P         D
Sbjct: 244 PLVDLANNEKD 254

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281

 Score = 70.7 bits (174), Expect = 5e-16
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 10  GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGAS 69
            +    A   E+V+T  L+  + A   D      G +AP+ IG ++     + G   G +
Sbjct: 142 HINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTA 201

Query: 70  MNPAVSFGPAVVSWT-------------WDNHWVYWLGPFIGAAIAAIAYSVAFIGPN 114
           MNPA  FGP V +W                   V   GP +GA + A AY    IG +
Sbjct: 202 MNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRK-LIGRH 258

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	99.96
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	99.96
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	99.95
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	99.95
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	99.95
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	99.95
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	99.95
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	99.94
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	99.94
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	99.94
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	99.93
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	99.93
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	99.92
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	99.85
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	99.82
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	99.82
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	99.81
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	99.81
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	99.8
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	99.8
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	99.8
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	99.8
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	99.8
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	99.79
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	99.79
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	99.79

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}

Probab=99.96  E-value=7.9e-29  Score=183.01  Aligned_cols=110  Identities=40%  Similarity=0.748  Sum_probs=98.8

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      ++++.++++.+..++++.|+++||+|++++++. .|+|+.......|+.+|+.+...+...+++||+++|||||||||+.
T Consensus       114 lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~  192 (223)
T 3gd8_A          114 LGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI  192 (223)
T ss_dssp             TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred             eeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence            567788889999999999999999999999987 5655544456789999999988888888999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .++|+++|+||++|++|+++++++|++++.|
T Consensus       193 ~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p  223 (223)
T 3gd8_A          193 MGNWENHWIYWVGPIIGAVLAGGLYEYVFCP  223 (223)
T ss_dssp             HTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             hcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999998764

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*

Probab=99.96  E-value=2.7e-28  Score=184.03  Aligned_cols=111  Identities=35%  Similarity=0.649  Sum_probs=100.9

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      ++.+.++++++..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+..++++.+++||+++||||||||++.
T Consensus       116 ~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~  194 (263)
T 2b6o_A          116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL  194 (263)
T ss_dssp             CSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHH
T ss_pred             cccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHH
Confidence            466778889999999999999999999999987 6655444456899999999999999999999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      .+.|+++|+||++|++|+++|+++|++++.++
T Consensus       195 ~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~  226 (263)
T 2b6o_A          195 TRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR  226 (263)
T ss_dssp             HTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred             cCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999998763

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}

Probab=99.95  E-value=2e-28  Score=189.70  Aligned_cols=111  Identities=40%  Similarity=0.754  Sum_probs=99.1

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      ++++.++++.+..++++.|+++||+|++++++. .|+++.......|+.+|+++.+.++.++++||+++||||||||+++
T Consensus       162 lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~  240 (340)
T 3iyz_A          162 LGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI  240 (340)
T ss_pred             eeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence            456778888999999999999999999999987 5555433345789999999988888888999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      .+.|.++|+||+||++|+++|+++|++++.|+
T Consensus       241 ~~~w~~~WVywvgPiiGailaallY~~l~~p~  272 (340)
T 3iyz_A          241 MGNWENHWIYWVGPIIGAVLAGALYEYVFCPD  272 (340)
T ss_pred             ccCCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998763

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}

Probab=99.95  E-value=8.5e-28  Score=181.52  Aligned_cols=111  Identities=38%  Similarity=0.638  Sum_probs=99.8

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      .+.+.+.++.+..++++.|+++||+|++++++. .|+++.......|+.+|+++.+.++.++++||+++||||||||+++
T Consensus       118 ~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~  196 (266)
T 3d9s_A          118 LAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVV  196 (266)
T ss_dssp             TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred             eeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence            456677788899999999999999999999987 5655543456899999999999999999999999999999999999


Q ss_pred             hcCccc-cchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           82 SWTWDN-HWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        82 ~~~~~~-~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      .+.|++ +|+||++|++|+++|+++|++++.++
T Consensus       197 ~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~  229 (266)
T 3d9s_A          197 MNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN  229 (266)
T ss_dssp             HTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence            999998 99999999999999999999998763

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A

Probab=99.95  E-value=6.8e-28  Score=184.61  Aligned_cols=110  Identities=40%  Similarity=0.763  Sum_probs=98.2

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      .+++.++++.+..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+.+.++..+++||+++|||||||||++
T Consensus       123 ~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~  201 (301)
T 2zz9_A          123 LGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI  201 (301)
T ss_dssp             SSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred             eeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHH
Confidence            456777888999999999999999999999987 5555443456889999999988888888999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .+.|.++|+||++|++|+++|+++|++++.+
T Consensus       202 ~~~w~~~WVy~vgPiiGailaa~ly~~l~~~  232 (301)
T 2zz9_A          202 MGNWENHWIYWVGPIIGAVLAGALYEYVFCP  232 (301)
T ss_dssp             HCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             hCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999875

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A

Probab=99.95  E-value=4.6e-28  Score=183.42  Aligned_cols=111  Identities=38%  Similarity=0.703  Sum_probs=98.9

Q ss_pred             CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978            2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      ++.+.+.++++..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+...++..+++||+++||||||||++.
T Consensus       126 ~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~  204 (271)
T 1j4n_A          126 LGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI  204 (271)
T ss_dssp             TTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred             cccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHH
Confidence            456677888899999999999999999999986 5655433456899999999998888888999999999999999999


Q ss_pred             hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      .++|+++|+||++|++|+++|+++|++++.++
T Consensus       205 ~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~  236 (271)
T 1j4n_A          205 THNFQDHWIFWVGPFIGAALAVLIYDFILAPR  236 (271)
T ss_dssp             TTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred             hCCCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998764

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*

Probab=99.95  E-value=3.6e-27  Score=179.11  Aligned_cols=107  Identities=36%  Similarity=0.528  Sum_probs=95.1

Q ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc
Q 037978            4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW   83 (124)
Q Consensus         4 ~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~   83 (124)
                      ++.++++.+..++++.|+++||+|++++++.+.++++  ...+.|+.+|+++..++++.+++||+++|||||||||+..+
T Consensus       159 ~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~  236 (279)
T 2w2e_A          159 ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR  236 (279)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT
T ss_pred             eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc
Confidence            3556667899999999999999999999987544443  34589999999999999999999999999999999999987


Q ss_pred             Cc-cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           84 TW-DNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        84 ~~-~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .| .++|+||++|++|+++|+++|++++..
T Consensus       237 ~~~~~~WVy~vgPiiGa~la~~ly~~l~~~  266 (279)
T 2w2e_A          237 SFPNYHWIYWLGPILGAFLAYSIWQMWKWL  266 (279)
T ss_dssp             CCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence            54 689999999999999999999999876

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*

Probab=99.94  E-value=4.8e-27  Score=178.59  Aligned_cols=109  Identities=29%  Similarity=0.467  Sum_probs=93.8

Q ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN-IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         4 ~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~-~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      ++.++++.+..++++.|+++||+|++++++. .|+|+.. ...+.|+.+|+++..++++.+++||+++|||||||||+..
T Consensus       136 ~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~  214 (281)
T 1ldf_A          136 STYPNPHINFVQAFAVEMVITAILMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFA  214 (281)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             eccCCccccHHHHHHHHHHHHHHHHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHH
Confidence            3455667899999999999999999999987 5555432 3468999999999999999999999999999999999985


Q ss_pred             c-------Ccc------ccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           83 W-------TWD------NHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        83 ~-------~~~------~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      .       .|+      |+|+||++|++|+++|+++|++++.++
T Consensus       215 ~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~  258 (281)
T 1ldf_A          215 WLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH  258 (281)
T ss_dssp             HHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred             HhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence            1       232      799999999999999999999998653

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A

Probab=99.94  E-value=1.6e-27  Score=182.77  Aligned_cols=110  Identities=43%  Similarity=0.719  Sum_probs=96.3

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC----chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHH
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG----IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP   78 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~----~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~   78 (124)
                      +.+.+.++.+..++++.|+++||+|+++++.. .|+++...+    .+.|+.+|+++++++++.+++||+++||||||||
T Consensus       174 g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~-~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GP  252 (304)
T 3cn5_A          174 GANSVALGYNKGTALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGA  252 (304)
T ss_dssp             TCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-EEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred             cccccCCCccHHHHHHHHHHHHHHHHHHHhhe-ecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHH
Confidence            34556778899999999999999999999954 665442222    2889999999999999999999999999999999


Q ss_pred             Hhh---hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           79 AVV---SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        79 ~l~---~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      |+.   .+.|+++|+||++|++|+++|+++|++++.++
T Consensus       253 al~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~  290 (304)
T 3cn5_A          253 AVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA  290 (304)
T ss_dssp             HHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             HHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence            999   56899999999999999999999999998763

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*

Probab=99.94  E-value=1.8e-26  Score=171.39  Aligned_cols=100  Identities=26%  Similarity=0.437  Sum_probs=90.8

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcC--ccc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDN   87 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~--~~~   87 (124)
                      +.+..++++.|+++||+|++++++. .|+|+  .+...|+.+|+.+..+++..+++||+++|||||||||+..++  |++
T Consensus       131 ~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~  207 (234)
T 2o9g_A          131 GYSMLSALVVELVLSAGFLLVIHGA-TDKFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQ  207 (234)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHH-TSTTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHS
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHh-cCCCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCce
Confidence            5789999999999999999999986 56543  345899999999999999999999999999999999999875  559


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +|+||++|++|+++|+++|++++.+
T Consensus       208 ~Wv~~vgP~~Ga~la~~~y~~~~~~  232 (234)
T 2o9g_A          208 LWFFWVVPIVGGIIGGLIYRTLLEK  232 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             eeeeehHHhHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999765

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*

Probab=99.93  E-value=3.8e-26  Score=170.72  Aligned_cols=107  Identities=36%  Similarity=0.542  Sum_probs=94.2

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh-
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV-   81 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~-   81 (124)
                      +++.+.++.+..++++.|+++||+|++++++.+.|+++.  ....|+.+|+++..++++.+++||+++||||||||++. 
T Consensus       133 ~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~  210 (246)
T 2f2b_A          133 GATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLND  210 (246)
T ss_dssp             GCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             eeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHH
Confidence            456666788999999999999999999999875555442  45789999999999999999999999999999999993 


Q ss_pred             -h----cCccccchHhhhhhHHHHHHHHHHHHHhc
Q 037978           82 -S----WTWDNHWVYWLGPFIGAAIAAIAYSVAFI  111 (124)
Q Consensus        82 -~----~~~~~~~vy~vap~~Ga~~a~~~~~~~~~  111 (124)
                       .    ..|.|.|+||++|++|+++|+++|+++++
T Consensus       211 ~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~  245 (246)
T 2f2b_A          211 MIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS  245 (246)
T ss_dssp             HHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence             2    26888999999999999999999999864

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=1e-25  Score=169.25  Aligned_cols=98  Identities=27%  Similarity=0.436  Sum_probs=88.7

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcC--ccc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDN   87 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~--~~~   87 (124)
                      ..+..++++.|+++||+|++++++. .|+|+.  ..+.|+.+|+++..+.++.+++||+++|||||||||+..+.  |++
T Consensus       154 ~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~  230 (256)
T 3llq_A          154 GYSLVSALLIEIILTAFFLIVILGS-THGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQ  230 (256)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccc
Confidence            5689999999999999999999976 566542  45889999999999999999999999999999999998764  669


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHh
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAF  110 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~  110 (124)
                      +|+||++|++|+++|+++|+++.
T Consensus       231 ~WVy~vgPi~Ga~la~~~y~~l~  253 (256)
T 3llq_A          231 LWLFWLAPIVGGAAGAVIWKLFG  253 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeeeeeHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999985

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}

Probab=99.92  E-value=5.5e-26  Score=170.94  Aligned_cols=104  Identities=20%  Similarity=0.314  Sum_probs=89.5

Q ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCchH-HHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc---
Q 037978            9 SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGIIA-PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---   83 (124)
Q Consensus         9 ~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~~~~~~-~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~---   83 (124)
                      ...+..++++.|+++||+|++++++. .|+|+. ....+. |+.+|+++..++++.+++||+++|||||||||+...   
T Consensus       130 ~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~  208 (258)
T 3c02_A          130 PSISLTGAFFNELILTGILLLVILVV-VDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAY  208 (258)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHH-HCHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHH-hCcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccc
Confidence            34566789999999999999999987 454432 234577 999999999999999999999999999999999862   


Q ss_pred             ---Cc----cccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           84 ---TW----DNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        84 ---~~----~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                         .|    .|+|+||++|++|+++|+++|++++.++
T Consensus       209 g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~  245 (258)
T 3c02_A          209 GKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL  245 (258)
T ss_dssp             CTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence               34    5799999999999999999999998763

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*

Probab=99.85  E-value=4.9e-21  Score=144.32  Aligned_cols=102  Identities=23%  Similarity=0.292  Sum_probs=88.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccccc
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH   88 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~   88 (124)
                      .+.++.+++|+++||+|+++.++++...+....+ ...++.+|+++++.+++.+++||+|+|||||+++++.++ +|.+.
T Consensus         7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~   86 (263)
T 2b6o_A            7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA   86 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence            4678999999999999999999886542221111 246789999999999999999999999999999999987 89999


Q ss_pred             chHhhhhhHHHHHHHHHHHHHhcC
Q 037978           89 WVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        89 ~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      |+||++|++|+++|+.+.+.++.+
T Consensus        87 ~~Yi~AQ~lGa~~ga~l~~~~~~~  110 (263)
T 2b6o_A           87 ICYVVAQLLGAVAGAAVLYSVTPP  110 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccc
Confidence            999999999999999999999875

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}

Probab=99.82  E-value=2.9e-20  Score=139.56  Aligned_cols=101  Identities=28%  Similarity=0.222  Sum_probs=85.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDPKR-G-NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD   86 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~-~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~   86 (124)
                      +.++.+++|+++|++|+++.++++...+. + ...  ...++++|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus        28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~  107 (256)
T 3llq_A           28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS  107 (256)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence            56899999999999999999987542111 1 111  245789999999999999999999999999999999987 899


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +...|+++|++|+++|+.+.+.++.+
T Consensus       108 ~~~~YiiAQ~lGA~~ga~lv~~~~~~  133 (256)
T 3llq_A          108 SLVPYVIAQVAGAIVAAAALYVIATG  133 (256)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999988753

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}

Probab=99.82  E-value=3.9e-20  Score=139.62  Aligned_cols=102  Identities=21%  Similarity=0.200  Sum_probs=88.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccccc
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH   88 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~   88 (124)
                      .+.++.+++|+++|++|+++.++++........+ ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.+.
T Consensus         9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~   88 (266)
T 3d9s_A            9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA   88 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence            4678999999999999999999886543221111 246789999999999999999999999999999999988 79999


Q ss_pred             chHhhhhhHHHHHHHHHHHHHhcC
Q 037978           89 WVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        89 ~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +.|+++|++|+++|+.+.+.++.+
T Consensus        89 ~~Yi~AQ~lGA~~ga~l~~~~~~~  112 (266)
T 3d9s_A           89 FFYVAAQLVGAIAGAGILYGVAPL  112 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccc
Confidence            999999999999999999998753

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A

Probab=99.81  E-value=8.9e-20  Score=139.67  Aligned_cols=103  Identities=17%  Similarity=0.210  Sum_probs=88.6

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG---NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-   83 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~---~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-   83 (124)
                      ..+.++.+++||++||+|+++.++++.+....   ...  ...++++|+++++.+++++++||+|+|||+|++.++.++ 
T Consensus         9 ~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~   88 (301)
T 2zz9_A            9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI   88 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCC
Confidence            44689999999999999999999875542211   111  246789999999999999999999999999999999988 


Q ss_pred             CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           84 TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        84 ~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .|.+...|+++|++|+++|+.+.+.++.+
T Consensus        89 ~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~  117 (301)
T 2zz9_A           89 SIAKSVFYITAQCLGAIIGAGILYLVTPP  117 (301)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            89999999999999999999999988865

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*

Probab=99.81  E-value=7.8e-20  Score=135.68  Aligned_cols=100  Identities=23%  Similarity=0.176  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978           13 AWNAVVFEIVMTFGLVYTVYATAVDPKRG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN   87 (124)
Q Consensus        13 ~~~~~~~E~i~T~~lv~~~~~~~~~~~~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~   87 (124)
                      ++|.+++|+++|++|++..++++..++..  ...  ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.+
T Consensus         4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~   83 (234)
T 2o9g_A            4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE   83 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence            57899999999999999998875432221  111  236789999999999999999999999999999999988 8999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ...|+++|++|+++|+.+.+.++.+
T Consensus        84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~  108 (234)
T 2o9g_A           84 VVGYVIAQVVGGIVAAALLYLIASG  108 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999988875

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*

Probab=99.80  E-value=8.8e-20  Score=136.23  Aligned_cols=102  Identities=25%  Similarity=0.289  Sum_probs=86.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCC----C-C------CCC-----C----chHHHHHHHHHHHHHHHhcCCCCCCC
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVDP----K-R------GNI-----G----IIAPIAIGFIVGANILAGGAFDGASM   70 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~----~-~------~~~-----~----~~~~~~igl~v~~~~~~~g~~tG~~l   70 (124)
                      ++.+|.+++|+++|++|++..++++...    + .      +..     +    ...++.+|+++++.+++.+++||+|+
T Consensus         2 ~~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~   81 (246)
T 2f2b_A            2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHI   81 (246)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheeccccccee
Confidence            3678999999999999999988754321    1 0      000     0    12688999999999999999999999


Q ss_pred             ChHhhHHHHhhhc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           71 NPAVSFGPAVVSW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        71 NPA~sl~~~l~~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      |||+|++.++.++ +|.+...|+++|++|+++|+.+.+.++++
T Consensus        82 NPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~  124 (246)
T 2f2b_A           82 NPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGI  124 (246)
T ss_dssp             SHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            9999999999988 89999999999999999999999999876

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}

Probab=99.80  E-value=9.5e-20  Score=134.38  Aligned_cols=101  Identities=17%  Similarity=0.225  Sum_probs=86.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCC-CC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDPK-RG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW   85 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~-~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~   85 (124)
                      +.+|.+++|+++|++|++..++++.+.. +.  +..  ....+.+|+++++.+++.+++||+|+|||+|++.++.++ +|
T Consensus         2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~   81 (223)
T 3gd8_A            2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI   81 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence            4689999999999999999998865421 11  111  246788999999999999999999999999999999987 79


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .+...|+++|++|+++|+.+.+.++++
T Consensus        82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~  108 (223)
T 3gd8_A           82 AKSVFYIAAQCLGAIIGAGILYLVTPP  108 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999999999999999999998888654

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}

Probab=99.80  E-value=1.1e-19  Score=140.82  Aligned_cols=101  Identities=17%  Similarity=0.214  Sum_probs=86.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C--C--CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDPKR-G--N--IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW   85 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~--~--~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~   85 (124)
                      +.++.+++||++||+|+++.++++.+... .  .  .....++++|+++++.+++++++||+|+|||+|++.++.++ .|
T Consensus        50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~  129 (340)
T 3iyz_A           50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI  129 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence            46899999999999999999988654211 1  1  11246789999999999999999999999999999999987 79


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      .+...|+++|++|+++|+.+.+.++.+
T Consensus       130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~  156 (340)
T 3iyz_A          130 AKSVFYITAQCLGAIIGAGILYLVTPP  156 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            999999999999999999998888765

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}

Probab=99.80  E-value=9.6e-20  Score=136.90  Aligned_cols=102  Identities=20%  Similarity=0.210  Sum_probs=86.0

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVD--PKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD   86 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~   86 (124)
                      .+.++.+++|+++|++|+++.++++.+  +.+...+ ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus         7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~   86 (258)
T 3c02_A            7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK   86 (258)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence            367899999999999999998876432  1111111 236788999999999999999999999999999999988 899


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +...|+++|++|+++|+.+.+.++++
T Consensus        87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~  112 (258)
T 3c02_A           87 KIPVYFFAQLLGAFVGTSTVYGLYHG  112 (258)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            99999999999999999999988765

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A

Probab=99.80  E-value=2.2e-19  Score=135.83  Aligned_cols=101  Identities=21%  Similarity=0.296  Sum_probs=86.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCC----CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDP------KRGNI----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~------~~~~~----~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      +.++.+++|+++|++|++..++++...      ++...    ....++++|+++++.+++++++||+|+|||+|++.++.
T Consensus         9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~   88 (271)
T 1j4n_A            9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS   88 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence            578899999999999999988875421      11111    12467899999999999999999999999999999999


Q ss_pred             hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus        89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~  120 (271)
T 1j4n_A           89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS  120 (271)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            88 79999999999999999999999988754

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A

Probab=99.79  E-value=2.6e-19  Score=137.24  Aligned_cols=101  Identities=21%  Similarity=0.285  Sum_probs=86.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCC--CCC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-C
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDP--KRG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T   84 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~--~~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~   84 (124)
                      +.++.+++||++||+|+++.++++...  .++  ...  ...++++|+++++.+++++++||+|+|||+|++.++.++ +
T Consensus        59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~  138 (304)
T 3cn5_A           59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE  138 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence            568999999999999999988764421  111  111  246789999999999999999999999999999999988 7


Q ss_pred             ccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           85 WDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        85 ~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      |.+...|+++|++|+++|+.+.+.++.+
T Consensus       139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~  166 (304)
T 3cn5_A          139 LLRALVYMIAQCLGAICGVGLVKAFMKG  166 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999988765

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*

Probab=99.79  E-value=8.9e-19  Score=132.95  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=84.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhc--CCCC----CCCC----chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAV--DPKR----GNIG----IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~--~~~~----~~~~----~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      +.++.+++|+++||+|+++.++++.  +...    ....    ...++++|+++++.+++++++||+|+|||+|++.++.
T Consensus        43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~  122 (279)
T 2w2e_A           43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA  122 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence            5678899999999999999877521  2111    1111    1367899999999999999999999999999999999


Q ss_pred             hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus       123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~  154 (279)
T 2w2e_A          123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPG  154 (279)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            88 89999999999999999999999998865

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*

Probab=99.79  E-value=1.9e-19  Score=136.76  Aligned_cols=102  Identities=16%  Similarity=0.081  Sum_probs=86.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978           11 VGAWNAVVFEIVMTFGLVYTVYATAVD---PKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD   86 (124)
Q Consensus        11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~---~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~   86 (124)
                      .+.++.+++|+++||+|+++.++++..   ++........++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus         5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~   84 (281)
T 1ldf_A            5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR   84 (281)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence            467899999999999999998875432   1111122246889999999999999999999999999999999988 899


Q ss_pred             ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           87 NHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        87 ~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      +...|+++|++|+++|+.+.+.++.+
T Consensus        85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~  110 (281)
T 1ldf_A           85 KVIPFIVSQVAGAFCAAALVYGLYYN  110 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999998888754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d1j4na_	249	f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId	2e-18
d1ymga1	234	f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [	3e-15
d1ymga1	234	f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [	0.003
d1fx8a_	254	f.19.1.1 (A:) Glycerol uptake facilitator protein	4e-14
d1rc2a_	231	f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId	3e-12

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.6 bits (185), Expect = 2e-18
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 5   FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGA 64
            AL+ GV +   +  EI+ T  LV  V AT  D +R ++G   P+AIGF V    L    
Sbjct: 129 NALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSVALGHLLAID 187

Query: 65  FDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNT 115
           + G  +NPA SFG +V++  + +HW++W+GPFIGAA+A + Y       ++
Sbjct: 188 YTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSS 238

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.0 bits (163), Expect = 3e-15
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
              L  GV    A + EI +T   V  ++AT  + + G +G +  +A+GF +    L G 
Sbjct: 113 LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV-ALAVGFSLTLGHLFGM 171

Query: 64  AFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYSVAF 110
            + GA MNPA SF PA+++  + NHWVYW+GP IGA + ++ Y    
Sbjct: 172 YYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLL 218

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 14  WNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIA-PIAIGFIVGANILAGGAFDGASMNP 72
           W A+  E   +   V+     ++    G + ++   +A G  +   + A G   GA +NP
Sbjct: 5   WRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNP 64

Query: 73  AVSFGPAV-VSWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNTH 116
           AV+F   V    +      Y +   +GA   A             
Sbjct: 65  AVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRG 109

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

 Score = 64.0 bits (155), Expect = 4e-14
 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 13/120 (10%)

Query: 4   AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGG 63
           +   +  +    A   E+V+T  L+  + A   D      G +AP+ IG ++     + G
Sbjct: 131 STYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMG 190

Query: 64  AFDGASMNPAVSFGPAVVSWT-------------WDNHWVYWLGPFIGAAIAAIAYSVAF 110
              G +MNPA  FGP V +W                   V   GP +GA + A AY    
Sbjct: 191 PLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLI 250

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

 Score = 59.0 bits (142), Expect = 3e-12
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 9   SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGA 68
            G    +A+V E+V++ G +  ++       +      APIAIG  +    L        
Sbjct: 127 GGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNT 183

Query: 69  SMNPAVSFGPAVVS--WTWDNHWVYWLGPFIGAAIAAIAYSVAF 110
           S+NPA S   A+    W  +  W +W+ P +G  I  + Y    
Sbjct: 184 SVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	99.94
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	99.93
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	99.92
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	99.91
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	99.84
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	99.79
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	99.76
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	99.75

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.3e-27  Score=176.07  Aligned_cols=110  Identities=27%  Similarity=0.347  Sum_probs=98.2

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      .++.++++.+..++++.|+++||+|+++++..+.++|+...+...|+.+|+.+...++..+++||+++|||||||||+..
T Consensus       130 ~~t~p~~~~s~~~~~~~E~v~Tf~lv~~il~~~~~~~~~~~~~~~~l~iG~~v~~~~~~~g~~TG~s~NPAR~lgpai~~  209 (254)
T d1fx8a_         130 FSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFA  209 (254)
T ss_dssp             TSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             eecCCCccccHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcccccchHHHHHHHHHHhhcccccccccChHHHHHHHHHH
Confidence            35667888999999999999999999999988555554445668899999999999999999999999999999999984


Q ss_pred             -------------cCccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           83 -------------WTWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        83 -------------~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                                   ++|+++|+||++|++|+++++++||+++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~wvy~vgP~~Ga~ia~~~y~~l~~~  252 (254)
T d1fx8a_         210 WLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR  252 (254)
T ss_dssp             HHTTTTTHHHHTTCSSCTTHHHHHTTHHHHHHHHHHHHHHTGG
T ss_pred             hhcccccccccCCCCCCeeehHhHHHHHHHHHHHHHHHHHHhh
Confidence                         368899999999999999999999999765

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3.4e-26  Score=167.97  Aligned_cols=110  Identities=35%  Similarity=0.659  Sum_probs=99.2

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      +.+.+.++.+..++++.|+++|++|+++++.. .|+++.......++.+|+.+.......+++||+++||||||||++..
T Consensus       112 ~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~-~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~~NPAR~~gp~v~~  190 (234)
T d1ymga1         112 ALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILT  190 (234)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTSCSCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             cccccCccchhhHHHHHHHHHHHHHHHhheee-ecCCccCcCcceeEeehHHHHHHHHHhcccccccccchhhhhHHHhc
Confidence            45567788999999999999999999999987 45555444567899999999999999999999999999999999999


Q ss_pred             cCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           83 WTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        83 ~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      +.|+++|+||++|++|+++|+++|++++.|+
T Consensus       191 ~~~~~~wiy~vgP~~Ga~laa~ly~~~~~~~  221 (234)
T d1ymga1         191 RNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR  221 (234)
T ss_dssp             TCCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred             cCccCeeeeehHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999998874

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=4e-26  Score=168.84  Aligned_cols=112  Identities=38%  Similarity=0.708  Sum_probs=100.5

Q ss_pred             CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978            3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS   82 (124)
Q Consensus         3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~   82 (124)
                      +.+.+.++.+..++++.|+++|++|+++++.. .|+|++......|+.+|+.+.......+++||+++||||++||++..
T Consensus       127 ~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~-~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAR~lgp~i~~  205 (249)
T d1j4na_         127 GLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVIT  205 (249)
T ss_dssp             TCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHT
T ss_pred             cceeccCCCchHHHHHHHHHHHHHHHHhheee-cccccCCCCCCchhHHHHHHHHHHHhcccccCcccChhhhhhHHHhc
Confidence            45667888999999999999999999999987 55555455567899999999999999999999999999999999999


Q ss_pred             cCccccchHhhhhhHHHHHHHHHHHHHhcCCCC
Q 037978           83 WTWDNHWVYWLGPFIGAAIAAIAYSVAFIGPNT  115 (124)
Q Consensus        83 ~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~~~  115 (124)
                      ++|+++|+||++|++|+++|+++|++++.|++.
T Consensus       206 ~~~~~~wvy~vgP~iGa~la~~~y~~~~~p~~~  238 (249)
T d1j4na_         206 HNFQDHWIFWVGPFIGAALAVLIYDFILAPRSS  238 (249)
T ss_dssp             TCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             cCccCeeeeehHHHHHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999999987443

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.6e-24  Score=158.30  Aligned_cols=103  Identities=26%  Similarity=0.478  Sum_probs=91.8

Q ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcCc--
Q 037978            8 SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW--   85 (124)
Q Consensus         8 ~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~~--   85 (124)
                      ..+.+..++++.|+++|++++++++.. .|+++  .+...|+.+|+++...++..+++||+++|||||+||++..+.|  
T Consensus       126 ~~~~~~~~~~~~E~i~t~~l~~~i~~~-~~~~~--~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~gp~i~~~~~~~  202 (231)
T d1rc2a_         126 PGGYSMLSALVVELVLSAGFLLVIHGA-TDKFA--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWAL  202 (231)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHH-TSTTS--CTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCSHHH
T ss_pred             CcccchhhhhHHHHHHHHHHHHHHhhh-hcccC--cccchhhHHHHHHHHhhhhccccCCcccchHhhhHHHHHcCCCcc
Confidence            345789999999999999999999876 55543  3457899999999999999999999999999999999998865  


Q ss_pred             cccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           86 DNHWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      +++|+||++|++|+++++++||+++.++
T Consensus       203 ~~~wvy~~~P~~Ga~~a~~ly~~~~~~~  230 (231)
T d1rc2a_         203 EQLWFFWVVPIVGGIIGGLIYRTLLEKR  230 (231)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred             cceeEEehHHHHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999998773

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=6.9e-21  Score=139.37  Aligned_cols=104  Identities=21%  Similarity=0.269  Sum_probs=89.7

Q ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978           10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN-IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN   87 (124)
Q Consensus        10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~-~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~   87 (124)
                      +.|.+|.+++|+++|+++++..++++....... .....++.+|++++..+++++++||+|+|||+|++..+.++ +|.+
T Consensus         1 s~s~~r~~laEf~GT~~lvf~g~gs~~~~~~~~~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g~i~~~~   80 (234)
T d1ymga1           1 SASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR   80 (234)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHHHCSCC-CHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhccCCChhh
Confidence            358899999999999999999998755433221 11246788999999999999999999999999999999988 7999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIGP  113 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~~  113 (124)
                      ...|+++|++|+++|+.+.+.++.++
T Consensus        81 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~  106 (234)
T d1ymga1          81 AICYMVAQLLGAVAGAAVLYSVTPPA  106 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             eeeeeehHHHHHHHHHHHHHHHcCcc
Confidence            99999999999999999999998764

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=3.7e-19  Score=129.48  Aligned_cols=100  Identities=23%  Similarity=0.195  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCC--CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978           13 AWNAVVFEIVMTFGLVYTVYATAVDPKR--GNI--GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN   87 (124)
Q Consensus        13 ~~~~~~~E~i~T~~lv~~~~~~~~~~~~--~~~--~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~   87 (124)
                      ++|.+++|+++|++|++..++++.....  +..  ....++.+|++++..+++.+++||+|+|||+|++..+.++ +|.+
T Consensus         1 l~r~~~aEfiGT~llvf~g~gs~~~~~~~~~~~~~~~~ia~~~Gl~v~~~i~~~g~iSGaH~NPAVTla~~~~g~~~~~~   80 (231)
T d1rc2a_           1 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE   80 (231)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTCSCTTT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHHhcccCccCCCchhHHHHhcCCCcHHH
Confidence            3688999999999999998876432111  111  1245789999999999999999999999999999999987 7999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ...|+++|++|+++|+.+.+.++.+
T Consensus        81 ~~~Yi~aQ~lGa~~g~~l~~~i~~~  105 (231)
T d1rc2a_          81 VVGYVIAQVVGGIVAAALLYLIASG  105 (231)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999988765

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=1.3e-18  Score=128.14  Aligned_cols=101  Identities=21%  Similarity=0.298  Sum_probs=85.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCC----CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVDP------KRGN----IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV   81 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~------~~~~----~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~   81 (124)
                      ..+|++++|+++||++++..++++...      +...    .....++.+|+++...+++++++||+|+|||+|++..+.
T Consensus         9 ~~wr~~~aEf~gTfllvf~~~gs~~~~~~~~~~~~~~~~~~~~l~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~   88 (249)
T d1j4na_           9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS   88 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccHHHHHHHHHHHHHHHHHHhhccccceeCchhHHHHHhc
Confidence            468999999999999999998864321      1111    112457889999999999999999999999999999999


Q ss_pred             hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus        89 g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~  120 (249)
T d1j4na_          89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS  120 (249)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cccchhheeeeeeHHHHHHHHHHhhheeeccc
Confidence            87 79999999999999999999999998765

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.2e-18  Score=128.67  Aligned_cols=101  Identities=16%  Similarity=0.076  Sum_probs=84.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978           12 GAWNAVVFEIVMTFGLVYTVYATAVD---PKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN   87 (124)
Q Consensus        12 ~~~~~~~~E~i~T~~lv~~~~~~~~~---~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~   87 (124)
                      ++.|.+++|+++|++|++..+++...   .+........++.+|+++...+++++++||+|+|||+|++..+.++ +|.+
T Consensus         1 tl~~~~lAEflGT~~lvf~g~g~~~~~~~~~~~~~~~~ia~~~g~~v~~~i~~~g~vSGaH~NPAVTla~~i~g~~~~~~   80 (254)
T d1fx8a_           1 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK   80 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCGGG
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHHhccccceEChhhHHHHHHcCCCcHHH
Confidence            35688999999999999987765332   1211223467899999999999999999999999999999999987 7999


Q ss_pred             cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978           88 HWVYWLGPFIGAAIAAIAYSVAFIG  112 (124)
Q Consensus        88 ~~vy~vap~~Ga~~a~~~~~~~~~~  112 (124)
                      ...|+++|++|+++|+.+.+.++++
T Consensus        81 ~~~Yi~aQ~lGa~~ga~l~~~~~~~  105 (254)
T d1fx8a_          81 VIPFIVSQVAGAFCAAALVYGLYYN  105 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999998877654