Citrus Sinensis ID: 038043


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
SSAGFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
cccccEEEEcccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHcHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHcccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccEEEEcccccEEEEEEEccccEEEEEEEEEcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHccEEccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccccccEEcc
cccccEEEEccHHHHHccHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccHHHHHHcccEEEEcccccEEEEEEEccccEEEEcEEEEcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHcccEEcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHcc
ssagfkirkvpehlrtenvkayepqiiaigplnhylpreeTHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFEldiwedddnvfMTSWVRKKLGRDLLLANNQLPLFVLQqfyddtkmpedqetnFQDLILGFFSKVLTVQLlnvprigpfyevdtkTKHLLGFICDyhwewvprfvpppydenwnFIISATNLkeagikferiegesllsidfdedagilkiptltidddIESFFRNISVyeqffpfdeyaplINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRlgdsvalplynfygdifhNVNEYCDRHWKRWIANLMHNyfntplaiis
ssagfkirkvpehlrtenvkayepqiiaigplNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
SSAGFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHmlllefvemlllDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
**************RTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAI**
***GFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
SSAGFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
**AGFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQL*NVPRIGPFYEVDTKTKHLLGFICDYHWEWV**********NWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
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SSAGFKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDDDNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYDENWNFIISATNLKEAGIKFERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q9SD53476 UPF0481 protein At3g47200 no no 0.932 0.758 0.293 4e-32
P0C897529 Putative UPF0481 protein no no 0.395 0.289 0.289 3e-13
>sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1 Back     alignment and function desciption
 Score =  139 bits (349), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 187/409 (45%), Gaps = 48/409 (11%)

Query: 7   IRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLS 66
           I +VPE     N KAY+P++++IGP  HY    E HL  +Q+HK   L+  L    +   
Sbjct: 48  IFRVPESFVALNPKAYKPKVVSIGPY-HY---GEKHLQMIQQHKPRLLQLFLDEAKKKDV 103

Query: 67  SLGRYLVAMRELEEKARCCYAEPI---HMLLLEFVEMLLLDACFIVELFRKFELDIWEDD 123
                + A+ +LE+K R  Y+E +   H L+     M++LD CFI+ +F     +I   +
Sbjct: 104 EENVLVKAVVDLEDKIRKSYSEELKTGHDLMF----MMVLDGCFILMVFLIMSGNIELSE 159

Query: 124 DNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTV 183
           D +F   W+   +  DLLL  NQ+P FVLQ  Y  +K+    + N   +   FF   +  
Sbjct: 160 DPIFSIPWLLSSIQSDLLLLENQVPFFVLQTLYVGSKIGVSSDLN--RIAFHFFKNPIDK 217

Query: 184 QLLNVPRIGPFYEV--DTKTKHLLGFICDYHW-------------------EWVPRFVPP 222
           +       G ++E   + K KHLL  I +                      E     VP 
Sbjct: 218 E-------GSYWEKHRNYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPS 270

Query: 223 PYDENWNFIISATNLKEAGIKF--ERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFR 280
              +    I+SA  L+  GIKF   R + +S+L++   ++   L+IP L  D  I SFF 
Sbjct: 271 VDSKAVPLILSAKRLRLQGIKFRLRRSKEDSILNVRLKKNK--LQIPQLRFDGFISSFFL 328

Query: 281 NISVYEQFFPFDEYAPLINYLKFMDSLINTAKDVELLFENK-ILHNCLGDDEVVANMFNR 339
           N   +EQF+  D    +  Y+ FM  L+N  +DV  L  +K I+ N  G +  V+  F  
Sbjct: 329 NCVAFEQFYT-DSSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKT 387

Query: 340 LGDSVALPLYNFY-GDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS 387
           +   V   +   Y  ++F  VNEY  + +    A   H +F +P   +S
Sbjct: 388 ISKDVVFEVDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLS 436





Arabidopsis thaliana (taxid: 3702)
>sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
198400349417 unknown protein [Camellia sinensis] 0.937 0.870 0.395 6e-63
224072717420 predicted protein [Populus trichocarpa] 0.937 0.864 0.399 5e-61
255554202422 conserved hypothetical protein [Ricinus 0.958 0.879 0.402 6e-61
359482319442 PREDICTED: UPF0481 protein At3g47200-lik 0.935 0.819 0.364 6e-52
297740074441 unnamed protein product [Vitis vinifera] 0.935 0.820 0.364 7e-52
296082009425 unnamed protein product [Vitis vinifera] 0.925 0.842 0.368 5e-51
224115876434 predicted protein [Populus trichocarpa] 0.937 0.836 0.375 1e-50
147799475439 hypothetical protein VITISV_031449 [Viti 0.922 0.813 0.382 1e-50
147840479441 hypothetical protein VITISV_026781 [Viti 0.945 0.829 0.360 2e-50
356559605434 PREDICTED: UPF0481 protein At3g47200-lik 0.943 0.841 0.344 4e-50
>gi|198400349|gb|ACH87183.1| unknown protein [Camellia sinensis] Back     alignment and taxonomy information
 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 158/399 (39%), Positives = 231/399 (57%), Gaps = 36/399 (9%)

Query: 5   FKIRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGED 64
           F I ++ E LR  N KAY+P+II+IGP +    R + +L  M++HK+ Y   LLQ +   
Sbjct: 28  FFIFRLHEELRQLNDKAYDPEIISIGPYH----RGKQNLQMMERHKLRYFHSLLQEKN-- 81

Query: 65  LSSLGRYLVAMRELEEKARCCYAEPIHMLLLEFVEMLLLDACFIVELFRKFELDIWEDD- 123
             S   ++ A+  LE  A   YAEPI +   E ++M++LD CFI+EL RKF+++   D+ 
Sbjct: 82  -LSPEDFVYAIGSLELHACDFYAEPISLDSDEMIKMMVLDGCFIIELLRKFDMEFLRDEN 140

Query: 124 DNVFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTV 183
           D +F   W+  +L RDL+L  NQ+P FVL + +D  + P + +     L L FFS +L  
Sbjct: 141 DPIFKRDWIFNRLQRDLMLFENQIPFFVLCKLFDMIEAPGNHKRLIY-LALRFFSDLL-- 197

Query: 184 QLLNVPRIGP---FYEVDTKTKHLLGFICDYHWEWVPRF--VPPPYDE-------NWNFI 231
                P  G      E   K  HLLG I   H  W P F  V P  D        NW FI
Sbjct: 198 -----PGTGKREDGKESQGKISHLLGLI---HSNWHPSFAGVEPVEDASNKKGKGNWRFI 249

Query: 232 ISATNLKEAGIKFERIE--GESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFF 289
            S   L+E+G+K E+ E  G SL  I+F    G+++IP LTI+   ESFFRN+  YEQ+ 
Sbjct: 250 PSTRELQESGVKIEKFEVTGGSLFDIEFKN--GVMQIPPLTIEGRTESFFRNLIAYEQYS 307

Query: 290 PFDEYAPLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLY 349
           P ++++ + +Y+KF+D LI++ KDV++L    I+ N LGDDE V+N+FN++ D+V+    
Sbjct: 308 PDNQFSYVADYVKFLDFLIDSPKDVKILSRRGIIDNWLGDDEAVSNLFNKISDTVSGTSM 367

Query: 350 NF-YGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS 387
           +F Y DIF+ VN +C + W  + A L  NYFN P A+I+
Sbjct: 368 HFRYADIFNRVNIHCSQPWNLYRATLNRNYFNNPWAMIA 406




Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072717|ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255554202|ref|XP_002518141.1| conserved hypothetical protein [Ricinus communis] gi|223542737|gb|EEF44274.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359482319|ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740074|emb|CBI30256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082009|emb|CBI21014.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115876|ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147799475|emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147840479|emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356559605|ref|XP_003548089.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2044918448 AT2G36430 "AT2G36430" [Arabido 0.945 0.816 0.331 3.9e-44
TAIR|locus:2083078531 AT3G50120 "AT3G50120" [Arabido 0.387 0.282 0.396 1.3e-39
TAIR|locus:2083108539 AT3G50140 [Arabidopsis thalian 0.387 0.278 0.396 6.7e-39
TAIR|locus:2083138503 AT3G50160 "AT3G50160" [Arabido 0.935 0.719 0.317 1.6e-38
TAIR|locus:2074755541 AT3G50170 "AT3G50170" [Arabido 0.387 0.277 0.370 1.1e-37
TAIR|locus:2083093564 AT3G50130 [Arabidopsis thalian 0.436 0.299 0.352 1.3e-36
TAIR|locus:2171127440 AT5G22540 "AT5G22540" [Arabido 0.937 0.825 0.302 5.7e-36
TAIR|locus:2083123509 AT3G50150 [Arabidopsis thalian 0.413 0.314 0.359 8.5e-36
TAIR|locus:2116667680 AT4G31980 "AT4G31980" [Arabido 0.387 0.220 0.341 1.9e-32
TAIR|locus:2148042353 AT5G11290 "AT5G11290" [Arabido 0.850 0.932 0.270 6e-32
TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 130/392 (33%), Positives = 193/392 (49%)

Query:     7 IRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLS 66
             I +VP+ +   N + YEP++++IGP +    R +T L  +++HK  YL  LL R  ++L+
Sbjct:    47 IFRVPQSMIDCNGRCYEPRVVSIGPYH----RGQTQLKMIEEHKWRYLNVLLTRT-QNLT 101

Query:    67 SLGRYLVAMRELEEKARCCYAEPIHXXXXXXXXXXXXDACFIVELFRKFE-LDIWEDDDN 125
              L  Y+ +++ +EE AR CY+E IH            D CF++ELFRK   L  +E +D 
Sbjct:   102 -LEDYMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLLELFRKVNNLVPFEPNDP 160

Query:   126 VFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETN--FQDLILGFFSKVLTV 183
             +   +WV     RD L   NQ+P FVL+  ++ T+   + ETN   Q L   FF+ ++  
Sbjct:   161 LVAMAWVLPFFYRDFLCLENQIPFFVLETLFNLTRGDNENETNASLQSLAFAFFNNMMHR 220

Query:   184 QLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPP---PYDENW--NFIISATNLK 238
                ++ R   F E+  + KHLL  +            PP   P  E    + I S + L+
Sbjct:   221 TEEDLAR---FKEL--RAKHLLDLLRSSFIPESELHTPPATNPGKEKMPSHIIHSISKLR 275

Query:   239 EAGIKFERI-EGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPL 297
              AGIK   + + ES L + F    G +++P +T+DD + SF  N   YEQ          
Sbjct:   276 RAGIKLRELKDAESFLVVRFRH--GTIEMPAITVDDFMSSFLENCVAYEQCHVACSMH-F 332

Query:   298 INYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYNFY-GDIF 356
               Y   +D L NT KDVE L +  I+ N  G D  +A   N LG  VA  +   Y  D+F
Sbjct:   333 TTYATLLDCLTNTYKDVEYLCDQNIIENYFGTDTELAKFVNSLGRDVAFDITQCYLKDLF 392

Query:   357 HNVNEYCDRHWK-RWIANLMHNYFNTPLAIIS 387
               VNEY    W   W A     YFN+P + +S
Sbjct:   393 EEVNEYYKSSWHVEW-ATFKFTYFNSPWSFVS 423




GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009741 "response to brassinosteroid stimulus" evidence=RCA
TAIR|locus:2083078 AT3G50120 "AT3G50120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083123 AT3G50150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148042 AT5G11290 "AT5G11290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
pfam03140387 pfam03140, DUF247, Plant protein of unknown functi 1e-104
>gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function Back     alignment and domain information
 Score =  311 bits (799), Expect = e-104
 Identities = 151/393 (38%), Positives = 206/393 (52%), Gaps = 29/393 (7%)

Query: 7   IRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRGEDLS 66
           I +VP  LR  N +AYEP++++IGP +H     + HL  M++HK  YL + L R G  LS
Sbjct: 1   IYRVPARLRDVNPEAYEPRVVSIGPYHH----GKPHLRAMEEHKWRYLNRFLDRTGRGLS 56

Query: 67  SLGRYLVAMRELEEKARCCYAEPIHMLLL-EFVEMLLLDACFIVELFRKFELDIWEDDDN 125
            L   L A+RELEE+AR CYAE +  +   EFVEMLLLD CFI+ELF +    I+ ++D 
Sbjct: 57  -LEDLLAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLSEGIYGENDP 115

Query: 126 VFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMPEDQETNFQDLILGFFSKVLTVQL 185
           +F   W+   + RDLLL  NQ+P FVL++ ++     +D +T+  DL L FF    +   
Sbjct: 116 LFARRWLLSLIRRDLLLLENQIPFFVLEKLFELLTGRQDVKTSLNDLALRFFYDCES--- 172

Query: 186 LNVPRIGPFYEVDTKTKHLLGFICDYHWEWVPRFVPPPYD---------ENWNFIISATN 236
                       ++   HLL          +P   P P                I SAT 
Sbjct: 173 ---LLPPDDLIEESNVHHLLDL---LRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATE 226

Query: 237 LKEAGIKF-ERIEGESLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYA 295
           L+EAG++F  R     +L + F    G+L+IP L +DD  ES  RN+  +EQ        
Sbjct: 227 LREAGVRFKRRKTASCILDVSFKR--GVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGN- 283

Query: 296 PLINYLKFMDSLINTAKDVELLFENKILHNCLGDDEVVANMFNRLGDSVAL-PLYNFYGD 354
            + +Y+ FMD+LINTA+DV LL    IL N LG DE VA  FNRL   V      ++   
Sbjct: 284 HVTSYVAFMDNLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSG 343

Query: 355 IFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS 387
           +F +VN YC   W RW A L   YF+ P A IS
Sbjct: 344 VFEDVNRYCRSRWNRWKATLRRKYFSNPWAAIS 376


The function of the plant proteins constituting this family is unknown. Length = 387

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PF03140391 DUF247: Plant protein of unknown function; InterPr 100.0
>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown Back     alignment and domain information
Probab=100.00  E-value=4.1e-107  Score=818.12  Aligned_cols=364  Identities=41%  Similarity=0.691  Sum_probs=326.0

Q ss_pred             EeecCchhhhcCCCCCcceeeeecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcC---CChhhHHHHHHHHHHHHHHHH
Q 038043            7 IRKVPEHLRTENVKAYEPQIIAIGPLNHYLPREETHLAEMQKHKVLYLKKLLQRRG---EDLSSLGRYLVAMRELEEKAR   83 (387)
Q Consensus         7 I~rVP~~lr~~n~~~Y~P~~VsIGPyHhg~~~~~~~L~~mE~~K~~~~~~~l~r~~---~~~~~l~~~~~~i~~~e~~~R   83 (387)
                      |||||+++|++|+++|+|++|||||||||    +++|+.||++|++|++.|++|++   .++++   ++++|.+++++||
T Consensus         1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g----~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~---~~~~i~~~e~~~R   73 (391)
T PF03140_consen    1 IYRVPESLRDVNPKAYTPQVVSIGPYHHG----KPDLQEMEEHKLRYLHRFLKRSGAPAESLED---YVEAIRSLEEEAR   73 (391)
T ss_pred             CcCCCHHHccCCchhcCCceEEeCCCCCC----chhhhhhHHHHHHHHHHHHHHhCCCcccHHH---HHHHHHHHHHHHH
Confidence            89999999999999999999999999999    99999999999999999999998   68888   9999999999999


Q ss_pred             hcccCCcC-CCHHHHHHHHHHHHHHHHHHHHhhccccccCCCc-ccchhhhhhhhhhhhhhhcccccHHHHHHHHhccCC
Q 038043           84 CCYAEPIH-MLLLEFVEMLLLDACFIVELFRKFELDIWEDDDN-VFMTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKM  161 (387)
Q Consensus        84 ~cY~~~~~-~~~~ef~~MmllDgCFlLe~~~~~~~~~~~~~d~-~~~~~~~~~~i~~Dl~LLENQiPffVLe~L~~~~~~  161 (387)
                      +||++++. +++++|++||++|||||||+|+.+.. ..+.+|| ++..+|.+..|.+||+|||||||||||++||++...
T Consensus        74 ~~Y~~~~~~~~~~~f~~MmllDgCFlLe~~~~~~~-~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~  152 (391)
T PF03140_consen   74 ACYAEDIDDMSSDEFVEMMLLDGCFLLEFFLRYSR-SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFG  152 (391)
T ss_pred             HHhcccccccCHHHHHHHHHHHHHHHHHHHHhhhh-ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcc
Confidence            99999987 99999999999999999999999874 2345688 888999999999999999999999999999999884


Q ss_pred             C-CcccchHHHHHHHhccccccccccCCCCCCCCcCCCCcCCChHHHHHhhhcCCCC--CCCCCCC------CCCccccc
Q 038043          162 P-EDQETNFQDLILGFFSKVLTVQLLNVPRIGPFYEVDTKTKHLLGFICDYHWEWVP--RFVPPPY------DENWNFII  232 (387)
Q Consensus       162 ~-~~~~~~l~~l~~~ff~~~~~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~~~~~--~~~~~~~------~~~~~~~~  232 (387)
                      + .....++.+++.+||.......   . ..  ......+++|||||+|.+++|+.+  .+.+...      ..++..+|
T Consensus       153 ~~~~~~~~l~~l~~~~~~~~~~~~---~-~~--~~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (391)
T PF03140_consen  153 SKSDVDESLIDLVLKFFYKHWPSW---P-PD--EPISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIR  226 (391)
T ss_pred             cccCccchHHHHHHhHhccccccc---c-cc--ccccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCC
Confidence            3 4567889999999994322211   1 11  125667899999999999999432  1111110      12467999


Q ss_pred             CHHHHHHcCcEEEecCCC-CceeeEEecCCceEEeceEEeccchhHHHHhHHHHHHhCCCCCCccceeHHHHHHhhcCCh
Q 038043          233 SATNLKEAGIKFERIEGE-SLLSIDFDEDAGILKIPTLTIDDDIESFFRNISVYEQFFPFDEYAPLINYLKFMDSLINTA  311 (387)
Q Consensus       233 sAteL~~aGVkfk~~~~~-~llDI~F~~~~G~L~iP~l~id~~T~~llrNLiA~Eq~~~~~~~~~vtsYv~fm~~LI~t~  311 (387)
                      |||||++|||+|+++++. +++||+|+  +|+|+||+|.||++|+++||||||||||+. ..+.+||||+.||++||+|+
T Consensus       227 sA~eL~~aGV~fk~~~~~~~~lDv~F~--~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~-~~~~~vtsY~~fm~~Li~t~  303 (391)
T PF03140_consen  227 SATELREAGVKFKPSETDRSLLDVKFK--KGVLEIPPLYIDDNTESLLRNLIAFEQCHP-PTGSYVTSYVFFMDSLINTP  303 (391)
T ss_pred             CHHHHHhCCcEEeeccCccccccceec--CCEEEeCeEEECCcchHHHhHHHHHHHHhc-cCCchHhHHHHHHHHHhCcH
Confidence            999999999999999876 59999998  999999999999999999999999999999 88999999999999999999


Q ss_pred             hhHHHHHhCCccccCCCChHHHHHHHHHhcccCCCCCCc-hHHHHHHHHHHHccCcHHHHHHhhccccccccccccC
Q 038043          312 KDVELLFENKILHNCLGDDEVVANMFNRLGDSVALPLYN-FYGDIFHNVNEYCDRHWKRWIANLMHNYFNTPLAIIS  387 (387)
Q Consensus       312 eDV~lL~~~gIi~n~lg~deeva~lFn~L~~~~~~~~~~-~~~~v~~~l~~y~~~r~~~w~a~l~~~yf~nPW~~is  387 (387)
                      +||++|+++|||+|++|+||+|++|||+||++++.++++ ||.+++++||+||++||++|+|+++|+||+|||+++|
T Consensus       304 ~DV~lL~~kgIi~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is  380 (391)
T PF03140_consen  304 EDVELLRRKGIIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFIS  380 (391)
T ss_pred             hhHHHHHhCCeEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHH
Confidence            999999999999999999999999999999999987654 9999999999999999999999999999999999886




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 57/420 (13%), Positives = 115/420 (27%), Gaps = 160/420 (38%)

Query: 54  LKKLLQRRGEDLSSLGRYLVAMRELEEKARCCYAEPIHMLLLE--FVEMLL-LDACFIVE 110
           L+KLL +   + +S   +   ++      +      +  LL    +   LL L       
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ----AELRRLLKSKPYENCLLVLL------ 251

Query: 111 LFRKFELDIWEDDD-NVF-------MTSWVRKKLGRDLLLANNQLPLFVLQQFYDDTKMP 162
                  ++      N F       +T+       R   + +     F+         + 
Sbjct: 252 -------NVQNAKAWNAFNLSCKILLTT-------RFKQVTD-----FLSAATTTHISLD 292

Query: 163 EDQETNFQDLILGFFSKVLTVQLLNVPR----IGPFYEVDTKTKHLLGFICDYHWEWVPR 218
               T   D +     K L  +  ++PR      P           L  I +   + +  
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR---------RLSIIAESIRDGLAT 343

Query: 219 FVPPPYDENW--------NFIISAT--NLKEAGIK--FERIEGESLLSIDFDEDAGILKI 266
           +      +NW          II ++   L+ A  +  F+R      LS+ F   A    I
Sbjct: 344 W------DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR------LSV-FPPSA---HI 387

Query: 267 P--TLTI---------DDDIESFFRN------------ISVYEQFF-------------- 289
           P   L++            + +                IS+   +               
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Query: 290 --------------------PFDEYAPLINYLKF-MDSLINTAKDVEL--LF------EN 320
                                 D+Y    +++   + ++ +  +      +F      E 
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505

Query: 321 KILHNCLGDDEVVANMFNRLGDSVALPLYNFYGDIFHNVNEYCDRHWKRWIANLMHNYFN 380
           KI H+    +    ++ N L     L  Y  Y  I  N     D  ++R +  ++     
Sbjct: 506 KIRHDSTAWN-ASGSILNTLQQ---LKFYKPY--ICDN-----DPKYERLVNAILDFLPK 554


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00