Citrus Sinensis ID: 038470

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Secondary Structure (PSIPRED)
ccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccEEEcccEEEccccEEEcEEcccccEEEEEEEcccccEEEEEEEccEEccEEEEEEccEEEEEcccccEEEEEEEccccEEEEEEEccccccEEEEEcccccEEEEEEEcccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccccccccccccccEEEEEccccEEEEEEEcccccccEEEccccEEEEccccccccEEEEEccccEEEEEEEcccccccEEEEEccccEEEEEEEcccccccEEEEEc
Coil and Loop (DISEMBL)
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSsiklansskilrpplpvfwsirsrpklekrgnsgcwvqvyskgdvykdryqkgkysgsgvyylsgryeggwnlrhgfgvykfyttdayagewsngqshgcgvhtcedgsryvgefkwgvkhdlghchfr
Flexible Loop (DISEMBL)
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSiklansskilrpplpvfWSIRsrpklekrgnsgcwvqvyskgdvykdryqkgkysGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Low Complexity Region (SEG)
IHffldfllgfalsaalllslnlalsrllfirlffVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Disordered region (IsUnstruct)
*HFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCH**
Disordered Region (DISOPRED)
IHFFLDFLLGFALSAALLLSLNLAL*****************************PVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Disordered Region (DISEMBL)
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Disordered Region (DISPRO)
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
IHFFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRSRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q9SLG9	772	Phosphatidylinositol 4-ph	no	no	0.476	0.103	0.416	3e-07
Q8VIG3	301	Radial spoke head 1 homol	yes	no	0.440	0.245	0.443	7e-07
Q8WYR4	309	Radial spoke head 1 homol	yes	no	0.476	0.258	0.411	2e-06
Q9ET80	660	Junctophilin-1 OS=Mus mus	no	no	0.529	0.134	0.364	2e-06
Q8L850	815	Phosphatidylinositol 4-ph	no	no	0.523	0.107	0.387	4e-06
Q6VTH5	218	Radial spoke head 1 homol	N/A	no	0.511	0.394	0.377	5e-06
Q9M1K2	779	Phosphatidylinositol 4-ph	no	no	0.458	0.098	0.382	5e-06
Q9GKY8	662	Junctophilin-1 OS=Oryctol	no	no	0.488	0.123	0.380	5e-06
Q9HDC5	661	Junctophilin-1 OS=Homo sa	no	no	0.488	0.124	0.380	6e-06
Q9BR39	696	Junctophilin-2 OS=Homo sa	no	no	0.529	0.127	0.327	1e-05

>sp|Q9SLG9|PI5K5_ARATH Phosphatidylinositol 4-phosphate 5-kinase 5 OS=Arabidopsis thaliana GN=PIP5K5 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYY-LSGR-YEGGW--NLRHGFGVYKFYTTDAYAGEWSNG 134
           +  G  Y+  ++ G   G G Y   SG  Y+G W  NL+HG GV  F   DAY GEW  G
Sbjct: 115 WPSGATYEGEFKSGYMDGIGTYTGPSGDAYKGQWVMNLKHGHGVKSFANGDAYDGEWRRG 174

Query: 135 QSHGCGVHTCEDGSRYVGEFKWGV 158
              G G +   DGS Y+GE+K G 
Sbjct: 175 LQEGQGKYQWSDGSYYIGEWKNGT 198

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6EC: 8

>sp|Q8VIG3|RSPH1_MOUSE Radial spoke head 1 homolog OS=Mus musculus GN=Rsph1 PE=1 SV=2

 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 79  YSKGDVYKDRYQKGKYSGSG--VYYLSGRYEGGW--NLRHGFGVYKFYTTDAYAGEWSNG 134
           +  G  Y   Y K K  G G  +Y    RYEG W  + RHG GVY +   D Y GEW N 
Sbjct: 61  FKNGARYTGDYVKNKKHGQGTFIYPDGSRYEGEWADDQRHGQGVYYYVNNDTYTGEWFNH 120

Query: 135 QSHGCGVHT-CEDGSRYVG 152
           Q HG G +   E GS+YVG
Sbjct: 121 QRHGQGTYLYAETGSKYVG 139

The specific expression during male germ cell development and its characteristic localization suggest that it may play an important role in male meiosis.

Mus musculus (taxid: 10090)

>sp|Q8WYR4|RSPH1_HUMAN Radial spoke head 1 homolog OS=Homo sapiens GN=RSPH1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 73  GCWVQVYSKGDVYKDRYQKGKYSGSG--VYYLSGRYEGGW--NLRHGFGVYKFYTTDAYA 128
           G  +  +  G  Y   Y + K  G G  +Y    RYEG W  +LRHG GVY +   D Y 
Sbjct: 55  GQGIYKFKNGARYIGEYVRNKKHGQGTFIYPDGSRYEGEWANDLRHGHGVYYYINNDTYT 114

Query: 129 GEWSNGQSHGCGVHT-CEDGSRYVG 152
           GEW   Q HG G +   E GS+YVG
Sbjct: 115 GEWFAHQRHGQGTYLYAETGSKYVG 139

May play an important role in male meiosis.

Homo sapiens (taxid: 9606)

>sp|Q9ET80|JPH1_MOUSE Junctophilin-1 OS=Mus musculus GN=Jph1 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 18/107 (16%)

Query: 72  SGCW--------VQVYSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGWNLRHGF----G 117
           SG W        V  +  G+ Y+  + +GK  G GV    G+  Y G W+  HGF    G
Sbjct: 39  SGSWSHGFEVVGVYTWPSGNTYQGYWAQGKRHGLGVE-TKGKWMYRGEWS--HGFKGRYG 95

Query: 118 VYKFYTTDA-YAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           V +   T A Y G WSNG   G GV T  DG  Y G++  G++H  G
Sbjct: 96  VRQSLCTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYG 142

Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH1 contributes to the construction of the skeletal muscle triad by linking the t-tubule (transverse-tubule) and SR (sarcoplasmic reticulum) membranes.

Mus musculus (taxid: 10090)

>sp|Q8L850|PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=2

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 73  GCWVQVYSKGDVYKDRYQKGKYSGSGVY-------YLSGRYEGGWNLRHGFGVYKFYTTD 125
           G   QVY  GDV++  + +G   G G Y       YL G  +GG     G G   + T D
Sbjct: 138 GLGYQVYPNGDVFEGSWIQGLGEGPGKYTWANKNVYL-GDMKGG--KMSGKGTLTWVTGD 194

Query: 126 AYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           +Y G W NG  HG GV+T  DG  YVG +  G+K   G
Sbjct: 195 SYEGSWLNGMMHGVGVYTWSDGGCYVGTWTRGLKDGKG 232

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|Q6VTH5|RSPH1_CYPCA Radial spoke head 1 homolog OS=Cyprinus carpio GN=rsph1 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 78  VYSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGW--NLRHGFGVYKFYTTDAYAGEWSN 133
           V  +GD Y+  Y+ GK  G G Y      RY G W  NL+HG GV  +     Y G W +
Sbjct: 36  VLPRGDTYQGAYENGKRCGQGTYKFKNGARYTGEWYMNLKHGQGVLYYPDGSKYEGSWVD 95

Query: 134 GQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
            Q  G GV+T  +G  Y GE+    +H  G
Sbjct: 96  DQRQGHGVYTYPNGDTYDGEWLHHQRHGQG 125

May play an important role in male meiosis (By similarity). May be involved in flagellar differentiation during spermiogenesis.

Cyprinus carpio (taxid: 7962)

>sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Arabidopsis thaliana GN=PIP5K4 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYY-LSG-RYEGGW--NLRHGFGVYKFYTTDAYAGEWSNG 134
           +  G  Y+  ++ G   G G+Y   SG  Y+G W  NL+HG G+ +F   D Y GEW  G
Sbjct: 117 WPSGATYEGEFKSGYMDGVGLYTGPSGDTYKGQWVMNLKHGHGIKRFANGDVYDGEWRRG 176

Query: 135 QSHGCGVHTCEDGSRYVGEFK 155
                G +   DGS Y+GE+K
Sbjct: 177 LQEAQGKYQWRDGSYYMGEWK 197

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|Q9GKY8|JPH1_RABIT Junctophilin-1 OS=Oryctolagus cuniculus GN=JPH1 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGWNLRHGF----GVYKFYTTDA-YAGEW 131
           +  G+ Y+  + +GK  G GV    G+  Y G W+  HGF    GV +   T A Y G W
Sbjct: 54  WPSGNTYQGYWAQGKRHGLGVE-TKGKWMYRGEWS--HGFKGRYGVRQSLCTPARYEGTW 110

Query: 132 SNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           SNG   G GV T  DG  Y G++  G++H  G
Sbjct: 111 SNGLQDGYGVETYGDGGTYQGQWAGGMRHGYG 142

Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH1 contributes to the construction of the skeletal muscle triad by linking the t-tubule (transverse-tubule) and SR (sarcoplasmic reticulum) membranes.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q9HDC5|JPH1_HUMAN Junctophilin-1 OS=Homo sapiens GN=JPH1 PE=1 SV=2

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGWNLRHGF----GVYKFYTTDA-YAGEW 131
           +  G+ Y+  + +GK  G GV    G+  Y G W+  HGF    GV +   T A Y G W
Sbjct: 54  WPSGNTYQGYWAQGKRHGLGVE-TKGKWMYRGEWS--HGFKGRYGVRQSLCTPARYEGTW 110

Query: 132 SNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           SNG   G GV T  DG  Y G++  G++H  G
Sbjct: 111 SNGLQDGYGVETYGDGGTYQGQWAGGMRHGYG 142

Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH1 contributes to the construction of the skeletal muscle triad by linking the t-tubule (transverse-tubule) and SR (sarcoplasmic reticulum) membranes.

Homo sapiens (taxid: 9606)

>sp|Q9BR39|JPH2_HUMAN Junctophilin-2 OS=Homo sapiens GN=JPH2 PE=1 SV=2

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 18/107 (16%)

Query: 72  SGCW--------VQVYSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGWNLRHGF----G 117
           SG W        V  +  G+ ++  + +GK  G G+    GR  Y+G W   HGF    G
Sbjct: 39  SGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIE-TKGRWLYKGEWT--HGFKGRYG 95

Query: 118 VYKFYTTDA-YAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           + +  ++ A Y G W+NG   G G  T  DG  Y G+F  G++H  G
Sbjct: 96  IRQSSSSGAKYEGTWNNGLQDGYGTETYADGGTYQGQFTNGMRHGYG 142

Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH2 is necessary for proper intracellular Ca(2+) signaling in cardiac myocytes via its involvement in ryanodine receptor-mediated calcium ion release. Contributes to the construction of skeletal muscle triad junctions.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
255571071	517	1-phosphatidylinositol-4-phosphate 5-kin	0.988	0.321	0.658	3e-62
449524645	509	PREDICTED: uncharacterized protein LOC10	0.988	0.326	0.642	2e-59
449442325	509	PREDICTED: uncharacterized protein LOC10	0.988	0.326	0.642	2e-59
359474508	432	PREDICTED: MORN repeat-containing protei	0.988	0.384	0.587	5e-53
224063641	432	predicted protein [Populus trichocarpa]	0.976	0.379	0.649	3e-50
224137098	424	predicted protein [Populus trichocarpa]	0.976	0.386	0.642	3e-50
225453307	494	PREDICTED: uncharacterized protein LOC10	0.988	0.336	0.606	2e-49
356524447	832	PREDICTED: uncharacterized protein LOC10	0.946	0.191	0.579	4e-48
356498144	453	PREDICTED: phosphatidylinositol-4-phosph	0.940	0.348	0.566	2e-46
224126597	333	predicted protein [Populus trichocarpa]	0.988	0.498	0.533	3e-46

>gi|255571071|ref|XP_002526486.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi|223534161|gb|EEF35877.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]

 Score =  242 bits (618), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 127/193 (65%), Positives = 133/193 (68%), Gaps = 27/193 (13%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRS 62
           F LDFL  FA SAALL SLNLAL RL  IRLF   S  IKL ++S I RPP PVFWSI S
Sbjct: 179 FLLDFLSAFAFSAALLFSLNLALPRLPSIRLFLARSFPIKLKSNSNITRPPFPVFWSIGS 238

Query: 63  RPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGV--YYLSGRYEGGW---------- 110
           R K EKR NSGCWVQVYS GDVY+  + KGK SGSGV  YY+SGRYEG W          
Sbjct: 239 RTKSEKRANSGCWVQVYSNGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWVDGKYDGYGV 298

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LRHGFGVY+FYT D YAGEWSNGQSHGCGVHTCEDGSRYVGEFK
Sbjct: 299 ETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 358

Query: 156 WGVKHDLGHCHFR 168
           W VKH LGH HFR
Sbjct: 359 WAVKHGLGHYHFR 371

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524645|ref|XP_004169332.1| PREDICTED: uncharacterized protein LOC101227932 [Cucumis sativus]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/193 (64%), Positives = 134/193 (69%), Gaps = 27/193 (13%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRS 62
           FFLDFL  FA SAALL SLNLA+ RL  IRLFF  S  +KL +SS   R  LPVFWSI S
Sbjct: 170 FFLDFLSAFAFSAALLFSLNLAVPRLPSIRLFFARSFPVKLISSSASSRTHLPVFWSIGS 229

Query: 63  RPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGV--YYLSGRYEGGW---------- 110
           R K EKR NSGCWVQVYS GDVY+  + KGK SGSGV  YY+SGRYEG W          
Sbjct: 230 RSKSEKRLNSGCWVQVYSDGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWIDGKYDGYGV 289

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LRHGFG+Y+FYT D YAGEWSNGQSHGCGVHTC+DGSR+VGEFK
Sbjct: 290 ETWARGSRYRGQYRQGLRHGFGMYRFYTGDVYAGEWSNGQSHGCGVHTCDDGSRFVGEFK 349

Query: 156 WGVKHDLGHCHFR 168
           WGVKH LGH HFR
Sbjct: 350 WGVKHGLGHYHFR 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442325|ref|XP_004138932.1| PREDICTED: uncharacterized protein LOC101207479 [Cucumis sativus]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/193 (64%), Positives = 134/193 (69%), Gaps = 27/193 (13%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRS 62
           FFLDFL  FA SAALL SLNLA+ RL  IRLFF  S  +KL +SS   R  LPVFWSI S
Sbjct: 170 FFLDFLSAFAFSAALLFSLNLAVPRLPSIRLFFARSFPVKLISSSASSRTHLPVFWSIGS 229

Query: 63  RPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGV--YYLSGRYEGGW---------- 110
           R K EKR NSGCWVQVYS GDVY+  + KGK SGSGV  YY+SGRYEG W          
Sbjct: 230 RSKSEKRLNSGCWVQVYSDGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWIDGKYDGYGV 289

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LRHGFG+Y+FYT D YAGEWSNGQSHGCGVHTC+DGSR+VGEFK
Sbjct: 290 ETWARGSRYRGQYRQGLRHGFGMYRFYTGDVYAGEWSNGQSHGCGVHTCDDGSRFVGEFK 349

Query: 156 WGVKHDLGHCHFR 168
           WGVKH LGH HFR
Sbjct: 350 WGVKHGLGHYHFR 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474508|ref|XP_003631483.1| PREDICTED: MORN repeat-containing protein 1-like [Vitis vinifera]

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 129/194 (66%), Gaps = 28/194 (14%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKL-ANSSKILRPPLPVFWSIR 61
             LDFL   A SAA+++SLNLAL RL  IR+F   S  IKL +++S   +P  PV WSI 
Sbjct: 94  LVLDFLSALAFSAAVVISLNLALPRLPSIRVFLARSLPIKLCSSASSASKPSQPVLWSIG 153

Query: 62  SRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--------- 110
           S+PK EKR NSG WVQVY+ GDVY+  + KGK SGSGVYY  +SGRYEG W         
Sbjct: 154 SKPKSEKRTNSGSWVQVYTNGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWVDEKYDGYG 213

Query: 111 ----------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEF 154
                            LRHG GVY+FYT D YAGEWSNGQ+HGCGVHTCEDGSRYVGEF
Sbjct: 214 VETWAKGSRFRGQYRQGLRHGIGVYRFYTGDVYAGEWSNGQTHGCGVHTCEDGSRYVGEF 273

Query: 155 KWGVKHDLGHCHFR 168
           KWGVKH  GH HFR
Sbjct: 274 KWGVKHGFGHYHFR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063641|ref|XP_002301242.1| predicted protein [Populus trichocarpa] gi|222842968|gb|EEE80515.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/194 (64%), Positives = 134/194 (69%), Gaps = 30/194 (15%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSI-KLANSSKILRPPLPVFWSIR 61
           F LDFL  FA SAALLLSLNLAL RL  IRLF   S +I KL NS+   R PLPVFWSI 
Sbjct: 103 FLLDFLSAFAFSAALLLSLNLALPRLPSIRLFLSRSFAINKLRNSAS--RHPLPVFWSIG 160

Query: 62  SRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--------- 110
           S+PK EKR  SGC+VQ YS GDVY+  + KGK SGSGVYY  +SGRYEG W         
Sbjct: 161 SKPKPEKRATSGCFVQDYSNGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWIDGKYDGYG 220

Query: 111 ----------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEF 154
                            LRHGFGVY+FYT D YAGEWSNGQSHGCGVHTCEDGSRYVGEF
Sbjct: 221 VETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEF 280

Query: 155 KWGVKHDLGHCHFR 168
           KWGVKH LGH HFR
Sbjct: 281 KWGVKHGLGHYHFR 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137098|ref|XP_002327021.1| predicted protein [Populus trichocarpa] gi|222835336|gb|EEE73771.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/193 (64%), Positives = 134/193 (69%), Gaps = 29/193 (15%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSI-KLANSSKILRPPLPVFWSIR 61
           F LDFL  FA SAALLLSLNLAL RL  IRLF   S +I KL NS+   R P+PVFWSI 
Sbjct: 90  FLLDFLSAFAFSAALLLSLNLALPRLPSIRLFLSRSFAINKLRNSAS--RSPIPVFWSIG 147

Query: 62  SRPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY-LSGRYEGGW---------- 110
           SR K EKR  SGC+VQVYS GDVY+  + KGK+SGSGVYY +SGRYEG W          
Sbjct: 148 SRSKPEKRAASGCFVQVYSNGDVYEGEFHKGKFSGSGVYYYMSGRYEGDWVDGKYDGYGV 207

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LRHGFGVY+FYT D YAGEWSNGQ+HGCGVHTCEDGSRYVGEFK
Sbjct: 208 ETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWSNGQTHGCGVHTCEDGSRYVGEFK 267

Query: 156 WGVKHDLGHCHFR 168
           WGVKH  GH HFR
Sbjct: 268 WGVKHGHGHYHFR 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453307|ref|XP_002269500.1| PREDICTED: uncharacterized protein LOC100256437 [Vitis vinifera]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/193 (60%), Positives = 127/193 (65%), Gaps = 27/193 (13%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRS 62
           +FLDF   F  SAALL SLNLAL RL  IRLF   S  IKL +   I RP LPVFWSI S
Sbjct: 156 YFLDFFSAFFFSAALLFSLNLALPRLPSIRLFLARSFPIKLVSGCAISRPALPVFWSIGS 215

Query: 63  RPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGV--YYLSGRYEGGW---------- 110
           RPK EK+ NSGC V+VY+ GDVY+    KGK  GSGV  YY+SGRYEG W          
Sbjct: 216 RPKPEKKANSGCCVEVYNNGDVYEGELHKGKCLGSGVYYYYMSGRYEGDWVDGKYDGYGV 275

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LR+GFGVY+FYT D YAG+WSNGQSHGCG HTCEDGSRYVGEFK
Sbjct: 276 ETWARGSRYRGQYRQGLRNGFGVYRFYTGDVYAGQWSNGQSHGCGTHTCEDGSRYVGEFK 335

Query: 156 WGVKHDLGHCHFR 168
           WGVKH  GH HFR
Sbjct: 336 WGVKHGHGHYHFR 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524447|ref|XP_003530840.1| PREDICTED: uncharacterized protein LOC100808327 [Glycine max]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/195 (57%), Positives = 123/195 (63%), Gaps = 36/195 (18%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLA-NSSKILRPPLPVFWSIR 61
           F LD L   A SAAL+ SLNLA    L +R     S  +K A NS+    P LPVFW+I 
Sbjct: 120 FLLDLLSAIAFSAALVFSLNLAFP--LPLR-----SVRLKAAKNSASRPAPALPVFWTIG 172

Query: 62  SRPKLEKRGN-SGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGW-------- 110
           SRPK EKR   SGCWVQV+  GDVY+  + +GK SGSGVYY S  GRYEG W        
Sbjct: 173 SRPKTEKRAAASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGY 232

Query: 111 -----------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGE 153
                             LRHGFGVY+FYT D YAGEWSNGQSHG GVHTCEDGSRYVGE
Sbjct: 233 GVETWARGSRYRGCYWQGLRHGFGVYRFYTGDVYAGEWSNGQSHGSGVHTCEDGSRYVGE 292

Query: 154 FKWGVKHDLGHCHFR 168
           FKWGVKH LGH HFR
Sbjct: 293 FKWGVKHGLGHYHFR 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498144|ref|XP_003517913.1| PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 5-like [Glycine max]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/196 (56%), Positives = 122/196 (62%), Gaps = 38/196 (19%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLF--IRLFFVCSSSIKLANSSKILRPPLPVFWSI 60
           F LD L   A SAAL+ SLNLA   L F  IRL    +S+ + A +       LPVFW+I
Sbjct: 121 FLLDLLSAIAFSAALVFSLNLAFP-LPFRSIRLKAAKNSASRPAAA-------LPVFWTI 172

Query: 61  RSRPKLEKRGN-SGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGW------- 110
            SR K EKR   SGCWVQV+  GDVY+  + +GK SGSGVYY S  GRYEG W       
Sbjct: 173 GSRQKTEKRAAASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDG 232

Query: 111 ------------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVG 152
                              LRHGFGVY+FYT D YAGEWSNGQSHGCGVHTCEDGSRYVG
Sbjct: 233 YGVETWARGSRYRGCYWQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVG 292

Query: 153 EFKWGVKHDLGHCHFR 168
           EFKWGVKH  GH HFR
Sbjct: 293 EFKWGVKHGHGHYHFR 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126597|ref|XP_002329594.1| predicted protein [Populus trichocarpa] gi|222870303|gb|EEF07434.1| predicted protein [Populus trichocarpa]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/193 (53%), Positives = 116/193 (60%), Gaps = 27/193 (13%)

Query: 3   FFLDFLLGFALSAALLLSLNLALSRLLFIRLFFVCSSSIKLANSSKILRPPLPVFWSIRS 62
           F ++FL   A    LL+ LNL L RL  IRL    S   KL ++        PV WSI S
Sbjct: 1   FIINFLFSIAFLITLLVCLNLVLPRLPSIRLLVTRSLPNKLKSTPFPTEASNPVVWSIGS 60

Query: 63  RPKLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW---------- 110
           +PK E +  SG WVQVYS GDVY+  + +GK SGSGVYY  +SGRYEG W          
Sbjct: 61  KPKKENKPYSGSWVQVYSNGDVYEGEFHEGKCSGSGVYYYYMSGRYEGDWVDEKYDGCGV 120

Query: 111 ---------------NLRHGFGVYKFYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFK 155
                           LRHG GVY+FYT D YAGEW NGQ HGCGVHTCEDGS+YVGEFK
Sbjct: 121 ETWAKGSRYRGQYRQGLRHGIGVYRFYTGDVYAGEWCNGQCHGCGVHTCEDGSKYVGEFK 180

Query: 156 WGVKHDLGHCHFR 168
           WGVKH LGH HFR
Sbjct: 181 WGVKHGLGHYHFR 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2130489	513	AT4G17080 "AT4G17080" [Arabido	0.595	0.194	0.609	7.5e-29
TAIR|locus:2063489	484	AT2G35170 "AT2G35170" [Arabido	0.595	0.206	0.609	1.5e-27
TAIR|locus:2204770	421	AT1G77660 "AT1G77660" [Arabido	0.595	0.237	0.533	1e-23
TAIR|locus:2201113	417	AT1G21920 "AT1G21920" [Arabido	0.577	0.232	0.514	4.7e-23
UNIPROTKB|E2QTV7	314	RSPH1 "Uncharacterized protein	0.494	0.264	0.433	3.9e-12
RGD|1307712	300	Rsph1 "radial spoke head 1 hom	0.523	0.293	0.421	4.2e-12
MGI|MGI:1194909	301	Rsph1 "radial spoke head 1 hom	0.523	0.292	0.421	4.3e-12
UNIPROTKB|E1BZ25	258	RSPH1 "Uncharacterized protein	0.535	0.348	0.387	4.4e-12
ZFIN|ZDB-GENE-041008-22	232	im:6909388 "im:6909388" [Danio	0.511	0.370	0.388	6.4e-12
UNIPROTKB|Q8WYR4	309	RSPH1 "Radial spoke head 1 hom	0.494	0.268	0.422	1.3e-11

TAIR|locus:2130489 AT4G17080 "AT4G17080" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 7.5e-29, P = 7.5e-29
 Identities = 64/105 (60%), Positives = 73/105 (69%)

Query:    69 RGN-SGCWVQVYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGWN--LRHGFGVYKFYT 123
             RG  SG  V  YS    Y+  +  GKY G GV  +  G RY G +   +RHG G+Y+FYT
Sbjct:   268 RGKCSGSGVYYYSMKGKYEGDWIDGKYDGYGVETWAKGSRYRGQYRQGMRHGTGIYRFYT 327

Query:   124 TDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR 168
              D YAGEWSNGQSHGCGV+T EDGSR+VGEFKWGVKH LGH HFR
Sbjct:   328 GDVYAGEWSNGQSHGCGVYTSEDGSRFVGEFKWGVKHGLGHYHFR 372

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2063489 AT2G35170 "AT2G35170" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 64/105 (60%), Positives = 68/105 (64%)

Query:    69 RGN-SGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGWNL--RHGFGVYKFYT 123
             RG  SG  V  YS    Y+  +  GKY G GV   S   RY G + L  RHG GVY FYT
Sbjct:   237 RGKCSGSGVYYYSMKGKYEGEWIDGKYDGYGVETWSKGSRYRGQYRLGLRHGIGVYTFYT 296

Query:   124 TDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR 168
              D YAGEWSNGQ HGCGV+T EDGSRY GEFKWGVKH LG  HFR
Sbjct:   297 GDVYAGEWSNGQCHGCGVYTSEDGSRYDGEFKWGVKHGLGSYHFR 341

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009294 "DNA mediated transformation" evidence=RCA

TAIR|locus:2204770 AT1G77660 "AT1G77660" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 56/105 (53%), Positives = 68/105 (64%)

Query:    69 RGN-SGCWVQVYSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGWN--LRHGFGVYKFYT 123
             RG  +G  V  Y     Y+  +  G+Y G G+   S   +Y+G +   LRHGFGVY FYT
Sbjct:   189 RGKCNGSGVYYYYVNGRYEGDWINGRYDGYGIECWSKGSKYKGQYKQGLRHGFGVYWFYT 248

Query:   124 TDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR 168
              D+Y+GEW NGQSHG GV TC DGS +VGEFK+GVKH LG  HFR
Sbjct:   249 GDSYSGEWFNGQSHGFGVQTCADGSSFVGEFKFGVKHGLGSYHFR 293

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2201113 AT1G21920 "AT1G21920" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 4.7e-23, P = 4.7e-23
 Identities = 52/101 (51%), Positives = 65/101 (64%)

Query:    72 SGCWVQVYSKGDVYKDRYQKGKYSGSGV--YYLSGRYEGGWN--LRHGFGVYKFYTTDAY 127
             +G  V  Y     Y+  +  G+Y G G+  +    RY+G +   LRHGFGVY+FYT D Y
Sbjct:   189 NGSGVYYYFVRGRYEGDWLDGRYDGHGIESWARGSRYKGQYRQGLRHGFGVYRFYTGDCY 248

Query:   128 AGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHFR 168
             AGEW NGQSHG GV +C DGS Y+GE ++GVKH LG  HFR
Sbjct:   249 AGEWFNGQSHGFGVQSCSDGSSYLGESRFGVKHGLGSYHFR 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

UNIPROTKB|E2QTV7 RSPH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 167 (63.8 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/90 (43%), Positives = 47/90 (52%)

Query:    68 KRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVYKFYT 123
             KR   G  +  +  G  Y   Y K K  G G + Y  G RYEG W  +LRHG+GVY +  
Sbjct:    52 KRHGQG--IYKFKSGARYIGEYVKNKKHGHGTFIYPDGSRYEGEWADDLRHGYGVYYYVN 109

Query:   124 TDAYAGEWSNGQSHGCGVHT-CEDGSRYVG 152
              D Y GEW   Q HG G +   E GS+YVG
Sbjct:   110 NDTYTGEWFAHQRHGQGTYFYAETGSKYVG 139

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

RGD|1307712 Rsph1 "radial spoke head 1 homolog (Chlamydomonas)" [Rattus norvegicus (taxid:10116)]

 Score = 166 (63.5 bits), Expect = 4.2e-12, P = 4.2e-12
 Identities = 40/95 (42%), Positives = 48/95 (50%)

Query:    68 KRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVYKFYT 123
             KR   G +   +  G  Y   Y K K  G G + Y  G RYEG W  + RHG GVY +  
Sbjct:    52 KRHGQGTYK--FKNGARYVGDYVKNKKHGQGTFVYPDGSRYEGEWADDQRHGHGVYYYVN 109

Query:   124 TDAYAGEWSNGQSHGCGVHT-CEDGSRYVGEFKWG 157
              D Y GEW N Q HG G +   E GS+YVG +  G
Sbjct:   110 NDTYTGEWFNHQRHGQGTYFYAETGSKYVGTWVHG 144

GO:0005634 "nucleus" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

MGI|MGI:1194909 Rsph1 "radial spoke head 1 homolog (Chlamydomonas)" [Mus musculus (taxid:10090)]

 Score = 166 (63.5 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 40/95 (42%), Positives = 48/95 (50%)

Query:    68 KRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVYKFYT 123
             KR   G +   +  G  Y   Y K K  G G + Y  G RYEG W  + RHG GVY +  
Sbjct:    52 KRHGQGTYK--FKNGARYTGDYVKNKKHGQGTFIYPDGSRYEGEWADDQRHGQGVYYYVN 109

Query:   124 TDAYAGEWSNGQSHGCGVHT-CEDGSRYVGEFKWG 157
              D Y GEW N Q HG G +   E GS+YVG +  G
Sbjct:   110 NDTYTGEWFNHQRHGQGTYLYAETGSKYVGTWVHG 144

GO:0005634 "nucleus" evidence=ISO

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0007126 "meiosis" evidence=IEA

UNIPROTKB|E1BZ25 RSPH1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 163 (62.4 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 38/98 (38%), Positives = 52/98 (53%)

Query:    79 YSKGDVYKDRYQKGKYSGSGV-YYLSG-RYEGGW--NLRHGFGVYKFYTTDAYAGEWSNG 134
             +  G  Y   Y + K  G G  YY  G +YEG W  + RHG+G Y +   D+YAGEW N 
Sbjct:    61 FKTGAYYVGEYLQNKKHGHGTFYYPDGSKYEGSWVDDQRHGYGEYTYANGDSYAGEWFND 120

Query:   135 QSHGCGVHTCED-GSRYVGEFKWGVKH---DLGHCHFR 168
               HG G +  +D GS YVG +  G++    +L H + R
Sbjct:   121 NRHGQGTYIYKDTGSMYVGGWVNGIQEGEAELIHLNHR 158

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

ZFIN|ZDB-GENE-041008-22 im:6909388 "im:6909388" [Danio rerio (taxid:7955)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 35/90 (38%), Positives = 47/90 (52%)

Query:    78 VYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVYKFYTTDAYAGEWSN 133
             V   GD Y+  Y+ GK SG G Y + +G RY G W  NL+HG G + +     Y G W +
Sbjct:    36 VLPNGDTYQGAYENGKRSGQGTYKFKNGARYTGEWYMNLKHGEGTFYYPDGSKYEGMWVD 95

Query:   134 GQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
              Q  G GV+T  +G  Y GE+    +H  G
Sbjct:    96 DQRQGLGVYTYPNGDTYDGEWLHHQRHGQG 125

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8WYR4 RSPH1 "Radial spoke head 1 homolog" [Homo sapiens (taxid:9606)]

 Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/90 (42%), Positives = 46/90 (51%)

Query:    68 KRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVYKFYT 123
             KR   G  +  +  G  Y   Y + K  G G + Y  G RYEG W  +LRHG GVY +  
Sbjct:    52 KRHGQG--IYKFKNGARYIGEYVRNKKHGQGTFIYPDGSRYEGEWANDLRHGHGVYYYIN 109

Query:   124 TDAYAGEWSNGQSHGCGVHT-CEDGSRYVG 152
              D Y GEW   Q HG G +   E GS+YVG
Sbjct:   110 NDTYTGEWFAHQRHGQGTYLYAETGSKYVG 139

GO:0007126 "meiosis" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.II.3174.1 hypothetical protein (432 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-10
COG4642	139	COG4642, COG4642, Uncharacterized protein conserve	6e-09
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-08
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	5e-07
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	4e-06
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-04
PLN03185	765	PLN03185, PLN03185, phosphatidylinositol phosphate	0.001
pfam02493	23	pfam02493, MORN, MORN repeat	0.002
COG4642	139	COG4642, COG4642, Uncharacterized protein conserve	0.003

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 77  QVYSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGWN--LRHGFGVYKFYTTDAYAGEWS 132
           Q Y  GDV++  + +G   G G Y  +    Y G        G G   + + D+Y G+W 
Sbjct: 95  QRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWL 154

Query: 133 NGQSHGCGVHTCEDGSRYVGEFKWGVK 159
           +G  HG GV+T  DG  YVG +  G+K
Sbjct: 155 DGMMHGFGVYTWSDGGCYVGTWTRGLK 181

Length = 765

>gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 65  KLEKRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYYL--SGRYEGGWN--LRHGFGVYK 120
           K  K    G     Y  G +Y    + GK +G G Y       YEG +N     G G   
Sbjct: 39  KQGKLAGKGSLK--YDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNSGKFRGQGTRG 96

Query: 121 FYTTDAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKH 160
            +    Y G ++ GQ++G G    EDGS Y G FK G   
Sbjct: 97  SFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFP 136

Length = 139

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 78  VYSKGDVYKDRYQKGKYSGSGVYYLSG--RYEGGW--NLRHGFGVYKFYTTDAYAGEWSN 133
           V S GD Y          G G Y  S    YEG W   +RHG G   + +   Y GE+S 
Sbjct: 4   VLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSG 63

Query: 134 GQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           G  HG G +T  DG+ Y G ++  +KH LG
Sbjct: 64  GYMHGSGTYTGTDGTTYKGRWRLNLKHGLG 93

Length = 765

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 48.3 bits (115), Expect = 5e-07
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYYLSGR--YEGGW--NLRHGFGVYKFYTTDAYAGEWSNG 134
           +  G  Y+  +  G   GSG Y  +    Y+G W  NL+HG G  ++   D + G W  G
Sbjct: 51  WPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPNGDVFEGSWIQG 110

Query: 135 QSHGCGVHTCEDGSRYVGEFKWG 157
              G G +T  +G+ Y+G+ K G
Sbjct: 111 LQEGPGKYTWANGNVYLGDMKGG 133

Length = 765

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 13/82 (15%)

Query: 73  GCWVQ---------VYSKGDVYKDRYQKGKYSGSGVY-YLSG-RYEGGW--NLRHGFGVY 119
           G W+Q          ++ G+VY    + GK SG G   ++SG  YEG W   + HGFGVY
Sbjct: 105 GSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVY 164

Query: 120 KFYTTDAYAGEWSNGQSHGCGV 141
            +     Y G W+ G   G GV
Sbjct: 165 TWSDGGCYVGTWTRGLKDGKGV 186

Length = 765

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 78  VYSKGDVYKDRYQKGKYSG-------SGVYYLSGRYEGGWNLRHGFGVYKFYTTDAYAGE 130
           ++S G +Y+  +++G   G       SG  Y  G + GG+   HG G Y       Y G 
Sbjct: 27  LWSDGCMYEGEWRRGMRHGNGKISWPSGATY-EGEFSGGY--MHGSGTYTGTDGTTYKGR 83

Query: 131 WSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           W     HG G     +G  + G +  G++   G
Sbjct: 84  WRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPG 116

Length = 765

>gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 80  SKGDVYKDRYQKGKYSGSG--VYYLSGRYEGGW--NLRHGFGVYKFYTTDAYAGEWSNGQ 135
           + G  YK R++     G G   Y     +EG W   L+ G G Y +   + Y G+   G+
Sbjct: 75  TDGTTYKGRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGK 134

Query: 136 SHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
             G G  T   G  Y G++  G+ H  G
Sbjct: 135 MSGKGTLTWVSGDSYEGQWLDGMMHGFG 162

Length = 765

>gnl|CDD|202256 pfam02493, MORN, MORN repeat

 Score = 33.9 bits (79), Expect = 0.002
 Identities = 14/23 (60%), Positives = 16/23 (69%)

Query: 127 YAGEWSNGQSHGCGVHTCEDGSR 149
           Y GEW NG+ HG GV+T  DG R
Sbjct: 1   YEGEWKNGKRHGKGVYTWPDGDR 23

The MORN (Membrane Occupation and Recognition Nexus) repeat is found in multiple copies in several proteins including junctophilins (See Takeshima et al. Mol. Cell 2000;6:11-22). A MORN-repeat protein has been identified in the parasite Toxoplasma gondiis a dynamic component of cell division apparatus in Toxoplasma gondii. It has been hypothesised to functions as a linker protein between certain membrane regions and the parasite's cytoskeleton. Length = 23

>gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 82  GDVYKDRYQKGKYSGSGVY-YLSGRYEGGWNLRHGF----GVYKFYTTDAYAGEWSNGQS 136
           G  Y+  + +GK  G   Y  L     GG +L+ G     G  K+     Y G   NG+ 
Sbjct: 8   GLRYEGFFVRGKLEGLSTYDILGCARVGG-SLKQGKLAGKGSLKYDNGRIYTGTLKNGKM 66

Query: 137 HGCGVHTCEDGSRYVGEFKWGVKHDLG 163
           +G G +T  +G  Y G F  G     G
Sbjct: 67  NGQGTYTFANGDIYEGPFNSGKFRGQG 93

Length = 139

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PLN03185	765	phosphatidylinositol phosphate kinase; Provisional	99.94
PLN03185	765	phosphatidylinositol phosphate kinase; Provisional	99.93
COG4642	139	Uncharacterized protein conserved in bacteria [Fun	99.66
COG4642	139	Uncharacterized protein conserved in bacteria [Fun	99.57
KOG0231	455	consensus Junctional membrane complex protein Junc	99.55
KOG0231	455	consensus Junctional membrane complex protein Junc	99.39
PF02493	23	MORN: MORN repeat; InterPro: IPR003409 The MORN (M	98.02
smart00698	26	MORN Possible plasma membrane-binding motif in jun	97.96
smart00698	26	MORN Possible plasma membrane-binding motif in jun	97.9
PF02493	23	MORN: MORN repeat; InterPro: IPR003409 The MORN (M	97.25
COG2849	230	Uncharacterized protein conserved in bacteria [Fun	94.06
COG2849	230	Uncharacterized protein conserved in bacteria [Fun	92.25

>PLN03185 phosphatidylinositol phosphate kinase; Provisional

Probab=99.94  E-value=3.4e-27  Score=213.41  Aligned_cols=117  Identities=29%  Similarity=0.543  Sum_probs=88.7

Q ss_pred             CCCCceEEEecCccccccc--cCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEec
Q 038470           51 RPPLPVFWSIRSRPKLEKR--GNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTT  124 (168)
Q Consensus        51 ~~~~~~~~~~g~~~~~~~~--~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g  124 (168)
                      +......|.+|+.|+|+|.  .+||.|++.|++|++|+|+|++|++||.|++.  ++.+|+|+|  +++||.|+++++||
T Consensus        21 hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~w~~gkkhG~G~~~y~nG  100 (765)
T PLN03185         21 EGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPNG  100 (765)
T ss_pred             ccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEEEeCCcccceeEEEEecc
Confidence            4556777888888888765  78888888888888888888888888888888  778888888  77777777777777


Q ss_pred             cceeccccCCcccccceeeccCCCeeeeeeeeecccCCccccc
Q 038470          125 DAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHF  167 (168)
Q Consensus       125 ~~y~G~~~~g~~~G~G~~~~~~G~~y~G~f~~g~~~G~G~~~~  167 (168)
                      ++|+|+|++|+++|.|+++++||++|+|+|++|++||.|+++|
T Consensus       101 ~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~  143 (765)
T PLN03185        101 DVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTW  143 (765)
T ss_pred             hhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEE
Confidence            7766666666666666666666666666666666666666655

>PLN03185 phosphatidylinositol phosphate kinase; Provisional

Probab=99.93  E-value=2.1e-26  Score=208.20  Aligned_cols=117  Identities=24%  Similarity=0.404  Sum_probs=73.9

Q ss_pred             CCCCceEEEecCccccccc--cCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEec
Q 038470           51 RPPLPVFWSIRSRPKLEKR--GNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTT  124 (168)
Q Consensus        51 ~~~~~~~~~~g~~~~~~~~--~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g  124 (168)
                      +......|.+|+.|+|++.  .+||.|++++++|++|+|+|+++++||.|++.  +|++|+|+|  +.+||.|++.++||
T Consensus        44 hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG  123 (765)
T PLN03185         44 HGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANG  123 (765)
T ss_pred             eCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEEEeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCC
Confidence            4445667777777777643  66777777777777777777777777777666  666666666  55555555555555


Q ss_pred             cceeccccCCcccccceeeccCCCeeeeeeeeecccCCccccc
Q 038470          125 DAYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHF  167 (168)
Q Consensus       125 ~~y~G~~~~g~~~G~G~~~~~~G~~y~G~f~~g~~~G~G~~~~  167 (168)
                      ++|+|+|++|++||.|+++|+||++|+|+|.+|++||.|+|+|
T Consensus       124 ~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~G~y~~  166 (765)
T PLN03185        124 NVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTW  166 (765)
T ss_pred             CeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceeeEEEEE
Confidence            5555555555555555555555555555555555555555554

>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.66  E-value=2.9e-16  Score=114.44  Aligned_cols=109  Identities=28%  Similarity=0.378  Sum_probs=97.8

Q ss_pred             ceEEEecCccccc--cccCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEecccee
Q 038470           55 PVFWSIRSRPKLE--KRGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTTDAYA  128 (168)
Q Consensus        55 ~~~~~~g~~~~~~--~~~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g~~y~  128 (168)
                      .+......++.+-  .....|.+...+.+|+.|+|.++|++++|.|++.  ++++|+|.|  +..+|.|+....+|..|+
T Consensus        25 ~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~s~~F~g~G~~~~~~Gw~~~  104 (139)
T COG4642          25 TYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNSGKFRGQGTRGSFNGWLYI  104 (139)
T ss_pred             eEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccccCccccceEeeccccCCEEe
Confidence            3444455555443  3468999999999999999999999999999999  999999999  999999999999999999


Q ss_pred             ccccCCcccccceeeccCCCeeeeeeeeecccCCc
Q 038470          129 GEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG  163 (168)
Q Consensus       129 G~~~~g~~~G~G~~~~~~G~~y~G~f~~g~~~G~G  163 (168)
                      |.|.+++.+|.|.+..+++.+|+|.|+.++.++.|
T Consensus       105 G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~~~  139 (139)
T COG4642         105 GRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPKNG  139 (139)
T ss_pred             eeecccccCCceeEEecCCcEEeeeEEeeecCCCC
Confidence            99999999999999999999999999999998865

>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.57  E-value=5.3e-15  Score=107.85  Aligned_cols=107  Identities=22%  Similarity=0.264  Sum_probs=98.3

Q ss_pred             cCcccccc--ccCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEeccceeccccCC
Q 038470           61 RSRPKLEK--RGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTTDAYAGEWSNG  134 (168)
Q Consensus        61 g~~~~~~~--~~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g~~y~G~~~~g  134 (168)
                      +.+|++.+  ...++..++..++++++.|..++++..|.|.+.  +|.+|+|.+  ++++|.|+++++|+++|+|.|.++
T Consensus         8 g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~s~   87 (139)
T COG4642           8 GLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNSG   87 (139)
T ss_pred             heeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccccCc
Confidence            44566543  377899999999999999999999999999999  899999999  999999999999999999999999


Q ss_pred             cccccceeeccCCCeeeeeeeeecccCCccccc
Q 038470          135 QSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHF  167 (168)
Q Consensus       135 ~~~G~G~~~~~~G~~y~G~f~~g~~~G~G~~~~  167 (168)
                      +.+|.|++...+|.+|+|.|.+++..|.|.+..
T Consensus        88 ~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~  120 (139)
T COG4642          88 KFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLK  120 (139)
T ss_pred             cccceEeeccccCCEEeeeecccccCCceeEEe
Confidence            999999999999999999999999999997643

>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]

Probab=99.55  E-value=3e-15  Score=130.33  Aligned_cols=99  Identities=38%  Similarity=0.660  Sum_probs=92.4

Q ss_pred             ccCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEeccceeccccCC----cccccc
Q 038470           69 RGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTTDAYAGEWSNG----QSHGCG  140 (168)
Q Consensus        69 ~~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g~~y~G~~~~g----~~~G~G  140 (168)
                      ....|.+...++++++|+|+|++++++|.|++.  +|..|+|+|  +++||+|+.+++||++|+|+|+++    .++|.+
T Consensus       129 ~~~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~~~~l~~l~~gk~  208 (455)
T KOG0231|consen  129 GTRSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYKNNILEALRHGKG  208 (455)
T ss_pred             cccCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEeecccccccccceE
Confidence            467888999999999999999999999999998  999999999  999999999999999999999999    899999


Q ss_pred             eeeccC----------CCeeeeeeee-ecccCCccccc
Q 038470          141 VHTCED----------GSRYVGEFKW-GVKHDLGHCHF  167 (168)
Q Consensus       141 ~~~~~~----------G~~y~G~f~~-g~~~G~G~~~~  167 (168)
                      .+.+.+          ..+|.++|.. ...|+.+.+.+
T Consensus       209 ~~~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~  246 (455)
T KOG0231|consen  209 RYKFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEA  246 (455)
T ss_pred             EEEEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEe
Confidence            999985          7899999999 99999888765

>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]

Probab=99.39  E-value=3.4e-13  Score=117.58  Aligned_cols=116  Identities=36%  Similarity=0.555  Sum_probs=99.9

Q ss_pred             CCCceEEEecCccccccc--cCccceEEEeecCceeeecccceeeeceeeEE--eeceecCCc--c----cccceeeeEE
Q 038470           52 PPLPVFWSIRSRPKLEKR--GNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--N----LRHGFGVYKF  121 (168)
Q Consensus        52 ~~~~~~~~~g~~~~~~~~--~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~----~~~G~G~~~~  121 (168)
                      ....+...+++.|++++.  .++|.|+..+++|..|+|+|.++++||+|++.  +|.+|+|+|  +    .+||.+.+.+
T Consensus       133 g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~~~~l~~l~~gk~~~~~  212 (455)
T KOG0231|consen  133 GEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYKNNILEALRHGKGRYKF  212 (455)
T ss_pred             ccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEeecccccccccceEEEEE
Confidence            445677889999999865  89999999999999999999999999999999  999999999  5    7999999999


Q ss_pred             Ee----------ccceeccccC-CcccccceeeccCCCeeeeeeeeecccCCccccc
Q 038470          122 YT----------TDAYAGEWSN-GQSHGCGVHTCEDGSRYVGEFKWGVKHDLGHCHF  167 (168)
Q Consensus       122 ~~----------g~~y~G~~~~-g~~~G~G~~~~~~G~~y~G~f~~g~~~G~G~~~~  167 (168)
                      .+          .++|.++|.+ ++.|+.+.+..++|..|.+.|..+..+|.+.+.|
T Consensus       213 ~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~  269 (455)
T KOG0231|consen  213 DDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHF  269 (455)
T ss_pred             eccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceec
Confidence            85          6788888888 8888888887777777777777777777776655

>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins ()

Probab=98.02  E-value=2.5e-06  Score=43.93  Aligned_cols=23  Identities=61%  Similarity=1.186  Sum_probs=19.1

Q ss_pred             eeccccCCcccccceeeccCCCe
Q 038470          127 YAGEWSNGQSHGCGVHTCEDGSR  149 (168)
Q Consensus       127 y~G~~~~g~~~G~G~~~~~~G~~  149 (168)
                      |+|+|++++++|.|+++++||++
T Consensus         1 Y~G~~~~g~~~G~G~~~~~~G~~   23 (23)
T PF02493_consen    1 YEGEWKNGKKHGYGVYTFPDGDR   23 (23)
T ss_dssp             ECCEEETTEEECEEEEE-TTS-E
T ss_pred             CEEEEEECcccccEEEEeCCCCC
Confidence            78999999999999999999874

The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....

>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases

Probab=97.96  E-value=3.5e-06  Score=44.95  Aligned_cols=23  Identities=52%  Similarity=1.005  Sum_probs=17.4

Q ss_pred             cceeccccCCcccccceeeccCC
Q 038470          125 DAYAGEWSNGQSHGCGVHTCEDG  147 (168)
Q Consensus       125 ~~y~G~~~~g~~~G~G~~~~~~G  147 (168)
                      ++|+|+|+++++||.|+++++|.
T Consensus         1 ~~Y~G~w~~g~~hG~G~~~~~d~   23 (26)
T smart00698        1 DRYEGEWRNGKRHGRGVYTYANX   23 (26)
T ss_pred             CeEEEEEECCeEEeeEEEEeccc
Confidence            35788888888888888887753

>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases

Probab=97.90  E-value=4.8e-06  Score=44.41  Aligned_cols=21  Identities=33%  Similarity=0.695  Sum_probs=19.1

Q ss_pred             CeeeeeeeeecccCCcccccC
Q 038470          148 SRYVGEFKWGVKHDLGHCHFR  168 (168)
Q Consensus       148 ~~y~G~f~~g~~~G~G~~~~~  168 (168)
                      ++|+|+|+++++||.|+++|+
T Consensus         1 ~~Y~G~w~~g~~hG~G~~~~~   21 (26)
T smart00698        1 DRYEGEWRNGKRHGRGVYTYA   21 (26)
T ss_pred             CeEEEEEECCeEEeeEEEEec
Confidence            479999999999999999874

>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins ()

Probab=97.25  E-value=7.6e-05  Score=38.21  Aligned_cols=19  Identities=47%  Similarity=0.761  Sum_probs=17.0

Q ss_pred             eeeeeeeecccCCcccccC
Q 038470          150 YVGEFKWGVKHDLGHCHFR  168 (168)
Q Consensus       150 y~G~f~~g~~~G~G~~~~~  168 (168)
                      |+|+|+++++||.|+++|+
T Consensus         1 Y~G~~~~g~~~G~G~~~~~   19 (23)
T PF02493_consen    1 YEGEWKNGKKHGYGVYTFP   19 (23)
T ss_dssp             ECCEEETTEEECEEEEE-T
T ss_pred             CEEEEEECcccccEEEEeC
Confidence            8999999999999999875

The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....

>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.06  E-value=0.21  Score=40.02  Aligned_cols=93  Identities=19%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             cCccceEEEeecCcee-eecccceeeeceeeEE--ee-ceecCCc-ccc-cceeeeEEEecc-ceeccccCCccccccee
Q 038470           70 GNSGCWVQVYSKGDVY-KDRYQKGKYSGSGVYY--LS-GRYEGGW-NLR-HGFGVYKFYTTD-AYAGEWSNGQSHGCGVH  142 (168)
Q Consensus        70 ~~~G~g~~~~~~G~~Y-~G~~~~g~~~G~G~~~--~g-~~y~G~~-~~~-~G~G~~~~~~g~-~y~G~~~~g~~~G~G~~  142 (168)
                      ..+|.....+++|... +-.+++|+.||.-...  +| -..+..| +.. .|.-...+++|. .-+-.++||+++|.-..
T Consensus       108 ~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~yy~nGkl~~e~~~knG~~~G~~k~  187 (230)
T COG2849         108 KLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTYYENGKLLSEVPYKNGKKNGVVKI  187 (230)
T ss_pred             ceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEEcCCCcEEEeecccCCcccceEEE
Confidence            4555555566666544 3456677777666655  44 3455566 333 777777777776 45667778888888887


Q ss_pred             eccCCC-eeeeeeeeecccCC
Q 038470          143 TCEDGS-RYVGEFKWGVKHDL  162 (168)
Q Consensus       143 ~~~~G~-~y~G~f~~g~~~G~  162 (168)
                      .+.+|. ..+..|++++++|.
T Consensus       188 Y~enGkl~~e~~~kng~~~G~  208 (230)
T COG2849         188 YYENGKLVEEVTYKNGKLDGV  208 (230)
T ss_pred             EccCCCEeEEEEecCCccccc
Confidence            778777 57788888887774

>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.25  E-value=0.75  Score=36.85  Aligned_cols=99  Identities=18%  Similarity=0.203  Sum_probs=75.1

Q ss_pred             cccCccceEEEeecCc-eeeecccceeeeceeeEE--eeceecC-Cc--ccccceeeeEEEecc-ceeccccCCcccccc
Q 038470           68 KRGNSGCWVQVYSKGD-VYKDRYQKGKYSGSGVYY--LSGRYEG-GW--NLRHGFGVYKFYTTD-AYAGEWSNGQSHGCG  140 (168)
Q Consensus        68 ~~~~~G~g~~~~~~G~-~Y~G~~~~g~~~G~G~~~--~g~~y~G-~~--~~~~G~G~~~~~~g~-~y~G~~~~g~~~G~G  140 (168)
                      ....+|.-....+||. ...-.+++|+++|.-...  +|...+= .|  +..||.-+..++||. ..+..|++++++|.-
T Consensus        82 ~~~~~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~  161 (230)
T COG2849          82 KTPFTGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIA  161 (230)
T ss_pred             ccCCcceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccE
Confidence            3456666666666664 456677888888888844  5643333 22  899999999999997 679999999999999


Q ss_pred             eeeccCCC-eeeeeeeeecccCCcccc
Q 038470          141 VHTCEDGS-RYVGEFKWGVKHDLGHCH  166 (168)
Q Consensus       141 ~~~~~~G~-~y~G~f~~g~~~G~G~~~  166 (168)
                      +..+++|. .-+-.+++|++.|.=..+
T Consensus       162 k~yy~nGkl~~e~~~knG~~~G~~k~Y  188 (230)
T COG2849         162 KTYYENGKLLSEVPYKNGKKNGVVKIY  188 (230)
T ss_pred             EEEcCCCcEEEeecccCCcccceEEEE
Confidence            99999998 578889999988865443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	3e-16
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	4e-11
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	2e-05
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	4e-05

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293

 Score = 73.2 bits (180), Expect = 3e-16
 Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 5/88 (5%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYYLS--GRYEGGW--NLRHGFGVYKFYT-TDAYAGEWSN 133
           +  G   +  Y      G GVY     G  +G +     +G            + G++ +
Sbjct: 2   FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKD 61

Query: 134 GQSHGCGVHTCEDGSRYVGEFKWGVKHD 161
              HG       DG   VGE     +  
Sbjct: 62  NIRHGVCWIYYPDGGSLVGEVNEDGEMT 89

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293

 Score = 59.0 bits (143), Expect = 4e-11
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 18/107 (16%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVY-YLSGR--YEGGW--NLRHGFGVYKFYTTDAYAGEWS- 132
           Y  G V +  Y  G+ +G        GR  ++G +  N+RHG     +    +  GE + 
Sbjct: 25  YEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNE 84

Query: 133 NGQSHGCGVHTC------------EDGSRYVGEFKWGVKHDLGHCHF 167
           +G+  G  +                DG    G+    +  + G  HF
Sbjct: 85  DGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHF 131

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 10/100 (10%), Positives = 23/100 (23%), Gaps = 10/100 (10%)

Query: 79  YSKGDVYKDRYQKGKYSGSGVYYL-----SGRYEGGW--NLRHGFGVYKFYTTDAYAGEW 131
           +  G++ + +      +  G  +      +  Y      +             ++     
Sbjct: 108 FIDGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYV 167

Query: 132 SNGQSHGCGVHT---CEDGSRYVGEFKWGVKHDLGHCHFR 168
           +       G         G   V  F  GV+        R
Sbjct: 168 AESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSR 207

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 12/105 (11%), Positives = 21/105 (20%), Gaps = 20/105 (19%)

Query: 79  YSKGDVYKDRYQK-GKYSGSGVYYLSG--------------RYEGGW--NLRHGFGVYKF 121
           Y  G        + G+ +G  + Y+                  EG     +    G   F
Sbjct: 72  YPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHF 131

Query: 122 YTTDA---YAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHDLG 163
                   Y  + S            +            +    G
Sbjct: 132 ELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAG 176

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	99.92
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	99.89
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	99.2
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	98.93

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A

Probab=99.92  E-value=3.8e-26  Score=187.06  Aligned_cols=109  Identities=21%  Similarity=0.233  Sum_probs=104.3

Q ss_pred             EEecCcccccc--ccCccceEEEeecCceeeecccceeeeceeeEE--eec-eecCCc--ccccceeeeEEEeccceecc
Q 038470           58 WSIRSRPKLEK--RGNSGCWVQVYSKGDVYKDRYQKGKYSGSGVYY--LSG-RYEGGW--NLRHGFGVYKFYTTDAYAGE  130 (168)
Q Consensus        58 ~~~g~~~~~~~--~~~~G~g~~~~~~G~~Y~G~~~~g~~~G~G~~~--~g~-~y~G~~--~~~~G~G~~~~~~g~~y~G~  130 (168)
                      |.+|++|++++  ..+||.|+++++||++|+|+|+++++||.|++.  +|. +|+|+|  +++||.|+++++||++|+|+
T Consensus         2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~   81 (293)
T 1h3i_A            2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGE   81 (293)
T ss_dssp             CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEE
T ss_pred             cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEE
Confidence            67899999985  499999999999999999999999999999999  898 999999  99999999999999999999


Q ss_pred             cc-CCccccc-ceeeccCCC-eeeeeeeeeccc-CCcccc
Q 038470          131 WS-NGQSHGC-GVHTCEDGS-RYVGEFKWGVKH-DLGHCH  166 (168)
Q Consensus       131 ~~-~g~~~G~-G~~~~~~G~-~y~G~f~~g~~~-G~G~~~  166 (168)
                      |+ ++++||. |+++++||+ +|+|+|++|++| |.|++.
T Consensus        82 ~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~  121 (293)
T 1h3i_A           82 VNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATL  121 (293)
T ss_dssp             CCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEE
T ss_pred             EeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEE
Confidence            99 9999999 999999999 699999999999 999876

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A

Probab=99.89  E-value=2.8e-24  Score=175.99  Aligned_cols=91  Identities=20%  Similarity=0.274  Sum_probs=88.1

Q ss_pred             EeecCceeeecccceeeeceeeEE--eeceecCCc--ccccceeeeEEEecc-ceeccccCCcccccceeeccCCCeeee
Q 038470           78 VYSKGDVYKDRYQKGKYSGSGVYY--LSGRYEGGW--NLRHGFGVYKFYTTD-AYAGEWSNGQSHGCGVHTCEDGSRYVG  152 (168)
Q Consensus        78 ~~~~G~~Y~G~~~~g~~~G~G~~~--~g~~y~G~~--~~~~G~G~~~~~~g~-~y~G~~~~g~~~G~G~~~~~~G~~y~G  152 (168)
                      +|+||++|+|+|+++++||.|++.  +|.+|+|+|  +++||.|+++++||+ +|+|+|+++++||.|+++++||++|+|
T Consensus         1 ~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G   80 (293)
T 1h3i_A            1 FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVG   80 (293)
T ss_dssp             CCSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEE
T ss_pred             CcCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEE
Confidence            378999999999999999999999  899999999  999999999999999 999999999999999999999999999


Q ss_pred             eee-eecccCC-cccccC
Q 038470          153 EFK-WGVKHDL-GHCHFR  168 (168)
Q Consensus       153 ~f~-~g~~~G~-G~~~~~  168 (168)
                      +|+ +|++||. |+++|+
T Consensus        81 ~~~~~g~~~G~gG~~~~~   98 (293)
T 1h3i_A           81 EVNEDGEMTGEKIAYVYP   98 (293)
T ss_dssp             ECCTTSCSCEEEEEEECT
T ss_pred             EEeECCeEeCCeEEEEEC
Confidence            999 9999999 998874

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*

Probab=99.20  E-value=4.7e-12  Score=102.09  Aligned_cols=52  Identities=25%  Similarity=0.338  Sum_probs=41.6

Q ss_pred             CCc--ccccceeeeEEEeccceecccc-CCccccc-ceeeccCCCe-eeeeeeeecc
Q 038470          108 GGW--NLRHGFGVYKFYTTDAYAGEWS-NGQSHGC-GVHTCEDGSR-YVGEFKWGVK  159 (168)
Q Consensus       108 G~~--~~~~G~G~~~~~~g~~y~G~~~-~g~~~G~-G~~~~~~G~~-y~G~f~~g~~  159 (168)
                      |+|  +++||.|+++++||++|+|+|+ +|.+||. |+|+++||++ |+|+|++|.+
T Consensus         3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~   59 (261)
T 2f69_A            3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM   59 (261)
T ss_dssp             --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred             ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcE
Confidence            566  7888888899999999999999 9999999 9999999998 9999998876

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*

Probab=98.93  E-value=2e-10  Score=92.56  Aligned_cols=50  Identities=18%  Similarity=0.222  Sum_probs=22.4

Q ss_pred             ecccceeeeceeeEE--eeceecCCc---ccccce-eeeEEEeccc-eeccccCCcc
Q 038470           87 DRYQKGKYSGSGVYY--LSGRYEGGW---NLRHGF-GVYKFYTTDA-YAGEWSNGQS  136 (168)
Q Consensus        87 G~~~~g~~~G~G~~~--~g~~y~G~~---~~~~G~-G~~~~~~g~~-y~G~~~~g~~  136 (168)
                      |+|++|++||.|++.  +|++|+|+|   +.+||. |+++|+||++ |+|+|+++.+
T Consensus         3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~   59 (261)
T 2f69_A            3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM   59 (261)
T ss_dssp             --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred             ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcE
Confidence            455555555555555  555555555   455555 5555555555 5555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00