Citrus Sinensis ID: 038722

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRHSYGMPPNE
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccccccccccccEEEEEEEEcccccccccHHHHHHHHHccccccccEEEccccHHHHHHcccEEEEEEcccccccccccccEEEHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHccccHHHEEEEccccHHHHHHcccEEEEEEcccccccccccccHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MVAAICYAWLLENrkrknkgqgdgyvVVPVMNIKRSNMWKHYQAAWLFHHvgldansllfadEVDLEILLMTGQLSIVVVGQDVlrtnaevgsqctiltdnscedaYDLLQTPVLKKILLAGILldthnldsysslstsrdAEAVQLLsigsspnyrnnLFDQYGSVLEAMRhsygmppne
Flexible Loop (DISEMBL)
MVAAICYAWLlenrkrknkgqgdgyvVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLlsigsspnyrnNLFDQYGSVLEAMRHsygmppne
Low Complexity Region (SEG)
MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRHSYGMPPNE
Disordered region (IsUnstruct)
**AAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSY***********VQLLSIG***NYRNNLFDQYGSVL*************
Disordered Region (DISOPRED)
MVAAICYAWLLENRKR***GQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDV*R**AEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMR**YGM****
Disordered Region (DISEMBL)
MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRH********
Disordered Region (DISPRO)
MVAAICYAWLLENRKRK***QGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRHS*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRHSYGMPPNE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q86TP1	453	Protein prune homolog OS=	yes	no	0.740	0.295	0.284	9e-07
Q5E9Y6	453	Protein prune homolog OS=	yes	no	0.845	0.337	0.268	2e-06
Q8BIW1	454	Protein prune homolog OS=	yes	no	0.845	0.337	0.257	6e-06
Q6AYG3	454	Protein prune homolog OS=	yes	no	0.845	0.337	0.257	4e-05

>sp|Q86TP1|PRUNE_HUMAN Protein prune homolog OS=Homo sapiens GN=PRUNE PE=1 SV=2

 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 35/169 (20%)

Query: 26  VVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVL 85
           V VPV+NIKRS +       +    V +  + L+F DE+DL  L   GQL++++V   +L
Sbjct: 51  VFVPVLNIKRSELPLRGDIVFFLQKVHIPESILIFRDEIDLHALYQAGQLTLILVDHHIL 110

Query: 86  RTN--------AE---------------------VGSQCTILTDNSCEDAYDLL--QTPV 114
             +        AE                     VGS  T++T+   + A ++L  QT  
Sbjct: 111 SKSDTALEEAVAEVLDHRPIEPKHCPPCHVSVELVGSCATLVTERILQGAPEILDRQTAA 170

Query: 115 LKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLL-SIGSSPNYRNNLFD 162
           L   L   I+LD  N+D     +T +D++ V+ L ++      RN++FD
Sbjct: 171 L---LHGTIILDCVNMDLKIGKATPKDSKYVEKLEALFPDLPKRNDIFD 216

Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|Q5E9Y6|PRUNE_BOVIN Protein prune homolog OS=Bos taurus GN=PRUNE PE=2 SV=1

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 41/194 (21%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           MV+A+  A+ L       +      V VPV+NIKRS +       +    + +  + L+F
Sbjct: 32  MVSALALAFYLAKTTEAEE------VFVPVLNIKRSELPLRGDNVFFLQKIHIPESVLIF 85

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVL-RTNAE----------------------------V 91
            DE+DL  L   GQL++++V   VL +++A                             V
Sbjct: 86  RDEIDLHALHQAGQLTLILVDHHVLPKSDAALEEAVAEVLDHRPIDQRHCPPCHVSVELV 145

Query: 92  GSQCTILTDNSCEDAYDLL--QTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLL- 148
           GS  T++ +   + A ++L  QT  L   L   ILLD  N+D     +T +D+  V+ L 
Sbjct: 146 GSCATLVAERILQGAPEILDRQTAAL---LHGTILLDCVNMDLKIGKATLKDSHYVEKLE 202

Query: 149 SIGSSPNYRNNLFD 162
           ++      RN++FD
Sbjct: 203 ALFPDLPSRNDIFD 216

Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q8BIW1|PRUNE_MOUSE Protein prune homolog OS=Mus musculus GN=Prune PE=2 SV=1

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 41/194 (21%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           MV+A+  A+ L       K      + +PV+NIKRS +       +    V +   +L+F
Sbjct: 32  MVSALALAFYL------TKTSEAEDIFIPVLNIKRSELPLRGDNVFFLQEVKIPEPALIF 85

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVL-RTNAE----------------------------V 91
            DE+DL  L   GQL++++V   +L +++A                             V
Sbjct: 86  RDEIDLLALHQAGQLTLILVDHHILPKSDAALEEAVAEVLDHRPIEQKYCPPCHVSVELV 145

Query: 92  GSQCTILTDNSCEDAYDLL--QTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAV-QLL 148
           GS  T++T+   + A + L  QT  L   L   I+LD  N+D+    +T +D++ V +L 
Sbjct: 146 GSCATLVTERILQGAPETLDRQTAAL---LHGTIILDCVNMDTNIGKATPKDSKYVEELE 202

Query: 149 SIGSSPNYRNNLFD 162
           ++      R ++FD
Sbjct: 203 ALFPDLPKRKDIFD 216

Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q6AYG3|PRUNE_RAT Protein prune homolog OS=Rattus norvegicus GN=Prune PE=2 SV=1

 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 41/194 (21%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           MV+A+  A+ L       K      + +PV+NIKRS +       +    V +  ++L+F
Sbjct: 32  MVSALALAFYL------TKTSEAEDIFIPVLNIKRSELPLRGDNVFFLQEVKIAESALIF 85

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVL-RTNAE----------------------------V 91
            DE+DL  L   GQL++++V   +L +++A                             V
Sbjct: 86  RDEIDLLALHQAGQLTLILVDHHMLPKSDAALEEAVAEVLDHRPIEQKYCPPCHVSVELV 145

Query: 92  GSQCTILTDNSCEDAYDLL--QTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLL- 148
           GS  T++ +   + A + L  QT  L   L   I+LD  N+D+    +T +D E V+ L 
Sbjct: 146 GSCATLVAERILQGAPETLDRQTAAL---LHGTIILDCVNMDAKIGKATLKDNEYVEKLE 202

Query: 149 SIGSSPNYRNNLFD 162
           ++      R ++FD
Sbjct: 203 ALFPDLPKRKDIFD 216

Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
297733689	439	unnamed protein product [Vitis vinifera]	1.0	0.412	0.703	6e-72
359491200	279	PREDICTED: uncharacterized protein LOC10	1.0	0.648	0.703	3e-71
224133690	657	predicted protein [Populus trichocarpa]	1.0	0.275	0.703	1e-70
255540485	648	conserved hypothetical protein [Ricinus	1.0	0.279	0.666	6e-68
194695354	268	unknown [Zea mays]	0.900	0.608	0.525	1e-41
297598157	518	Os01g0909300 [Oryza sativa Japonica Grou	0.762	0.266	0.574	1e-40
357131513	508	PREDICTED: uncharacterized protein LOC10	0.773	0.275	0.554	5e-37
414879091	309	TPA: hypothetical protein ZEAMMB73_80124	0.679	0.398	0.569	3e-34
125528790	477	hypothetical protein OsI_04863 [Oryza sa	0.685	0.259	0.556	8e-34
413955569	305	hypothetical protein ZEAMMB73_670957 [Ze	0.679	0.403	0.569	9e-34

>gi|297733689|emb|CBI14936.3| unnamed protein product [Vitis vinifera]

 Score =  275 bits (703), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 133/189 (70%), Positives = 153/189 (80%), Gaps = 8/189 (4%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGY--VVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSL 58
           MVAAICYAWLLENR R +K + D    VVVPVMN++R NMWK  +AAWLFHH+G+DA SL
Sbjct: 192 MVAAICYAWLLENRMRDSKKEDDEEECVVVPVMNVRRGNMWKLLRAAWLFHHIGIDATSL 251

Query: 59  LFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKI 118
           LF+DEVDLE L+M  QLSI+VVGQDVLRTN EVGSQCTILTDN CEDAYDLLQ PVLK +
Sbjct: 252 LFSDEVDLENLMMAKQLSILVVGQDVLRTNGEVGSQCTILTDNYCEDAYDLLQIPVLKNL 311

Query: 119 LLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY------GSVLEAMR 172
           LLAGILLDT NL++ + LS +RDAEAVQLL +GS+PN+RN LFDQ        S  EA+R
Sbjct: 312 LLAGILLDTRNLNASAKLSMARDAEAVQLLLVGSAPNHRNTLFDQLMQDQRDNSFFEALR 371

Query: 173 HSYGMPPNE 181
           H+YG PPNE
Sbjct: 372 HNYGKPPNE 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491200|ref|XP_002277186.2| PREDICTED: uncharacterized protein LOC100248384 [Vitis vinifera]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/189 (70%), Positives = 153/189 (80%), Gaps = 8/189 (4%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGY--VVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSL 58
           MVAAICYAWLLENR R +K + D    VVVPVMN++R NMWK  +AAWLFHH+G+DA SL
Sbjct: 1   MVAAICYAWLLENRMRDSKKEDDEEECVVVPVMNVRRGNMWKLLRAAWLFHHIGIDATSL 60

Query: 59  LFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKI 118
           LF+DEVDLE L+M  QLSI+VVGQDVLRTN EVGSQCTILTDN CEDAYDLLQ PVLK +
Sbjct: 61  LFSDEVDLENLMMAKQLSILVVGQDVLRTNGEVGSQCTILTDNYCEDAYDLLQIPVLKNL 120

Query: 119 LLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY------GSVLEAMR 172
           LLAGILLDT NL++ + LS +RDAEAVQLL +GS+PN+RN LFDQ        S  EA+R
Sbjct: 121 LLAGILLDTRNLNASAKLSMARDAEAVQLLLVGSAPNHRNTLFDQLMQDQRDNSFFEALR 180

Query: 173 HSYGMPPNE 181
           H+YG PPNE
Sbjct: 181 HNYGKPPNE 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133690|ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 133/189 (70%), Positives = 151/189 (79%), Gaps = 8/189 (4%)

Query: 1   MVAAICYAWLLENRKRKNKGQGD--GYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSL 58
           MVAAICYA LL NR  KNKG  D  G VV PVMN +R  MWK  QAAWLF HVGLDA SL
Sbjct: 378 MVAAICYALLLANRMTKNKGNSDREGTVVFPVMNTRRGRMWKQRQAAWLFQHVGLDATSL 437

Query: 59  LFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKI 118
           LFADEVDLE L+M G+L+I+VVGQD+LRTN EVGSQCTILTDN CEDAYDLLQTPVLKK+
Sbjct: 438 LFADEVDLESLMMEGKLNILVVGQDILRTNGEVGSQCTILTDNYCEDAYDLLQTPVLKKL 497

Query: 119 LLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY------GSVLEAMR 172
           LLAGILLDT NL++ ++ S +RDAEAVQLL +GS+P YRN LFDQ        S +EA+R
Sbjct: 498 LLAGILLDTQNLNASATCSMTRDAEAVQLLLVGSTPKYRNALFDQLMQDQRDSSFIEALR 557

Query: 173 HSYGMPPNE 181
           H+YG PP+E
Sbjct: 558 HNYGKPPSE 566

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540485|ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis] gi|223550422|gb|EEF51909.1| conserved hypothetical protein [Ricinus communis]

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 126/189 (66%), Positives = 153/189 (80%), Gaps = 8/189 (4%)

Query: 1   MVAAICYAWLLENRKRKNKGQ--GDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSL 58
           MVAAICYAWLLENR  K KG+  G+GYVVVPVMN++R  MWK  QAAWLF +VGLDA SL
Sbjct: 371 MVAAICYAWLLENRFMKIKGEDNGEGYVVVPVMNVRRGRMWKQRQAAWLFQYVGLDATSL 430

Query: 59  LFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKI 118
           LFADEVDLE L+M GQL+I+VVGQD+L+T++E  SQCTILTDN CEDAYDLL  P+L+K+
Sbjct: 431 LFADEVDLESLIMAGQLTILVVGQDILKTDSEDRSQCTILTDNYCEDAYDLLHIPMLRKL 490

Query: 119 LLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY------GSVLEAMR 172
           LLAGILLDT NL++ +  S +RDAEAVQLL +GS+P+YRN LF+Q        S  EA+R
Sbjct: 491 LLAGILLDTQNLNASTKSSMTRDAEAVQLLLVGSAPDYRNTLFNQLMQNQRDNSFFEALR 550

Query: 173 HSYGMPPNE 181
           ++YG PP+E
Sbjct: 551 YNYGKPPSE 559

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194695354|gb|ACF81761.1| unknown [Zea mays]

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/175 (52%), Positives = 126/175 (72%), Gaps = 12/175 (6%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           +VAAICYAW+L ++       GDG   VPV+N+ RS M +  QAAWL +HVG+DA++LLF
Sbjct: 30  IVAAICYAWMLPSK-------GDGQATVPVVNMSRSRMARCRQAAWLLYHVGVDASALLF 82

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
           ADEVD + L+M  +++++VVGQD+L++ AEVGS CT LT   CEDAY LLQ   +KK+LL
Sbjct: 83  ADEVDTDGLIMDQRVNLLVVGQDILKSKAEVGSVCTTLTHTYCEDAYSLLQNLDIKKLLL 142

Query: 121 AGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQYGSVLEAMRHSY 175
           AGILLDT+NL   S   ++RD++AVQLL  G+S + R+ LF Q   +L+   HS+
Sbjct: 143 AGILLDTNNL---SKKCSNRDSDAVQLLLFGTSEHMRHELFQQL--MLDHNDHSF 192

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297598157|ref|NP_001045149.2| Os01g0909300 [Oryza sativa Japonica Group] gi|255673982|dbj|BAF07063.2| Os01g0909300 [Oryza sativa Japonica Group]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 114/148 (77%), Gaps = 10/148 (6%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           + AAICYAW+L +++       D    VPV+N++R  M +  QAAWL HHVG+DA++LLF
Sbjct: 276 IAAAICYAWMLASKE-------DAEAAVPVVNMRRGRMERCRQAAWLLHHVGVDASALLF 328

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
           ADEVD+E L+M  ++S+VVVGQDVL+ N ++GS CTILT+N CEDAY LLQ+  +KK+LL
Sbjct: 329 ADEVDMEGLMMDKRVSLVVVGQDVLKPNDKMGSVCTILTNNYCEDAYSLLQSLDIKKLLL 388

Query: 121 AGILLDTHNLDSYSSLSTSRDAEAVQLL 148
           AGILLDT NL   S++ ++RD+EAVQLL
Sbjct: 389 AGILLDTKNL---SNMCSNRDSEAVQLL 413

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357131513|ref|XP_003567381.1| PREDICTED: uncharacterized protein LOC100838382 [Brachypodium distachyon]

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 82/148 (55%), Positives = 110/148 (74%), Gaps = 8/148 (5%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           +VAAICYAW+L +     K  G     VPV+N++RS M +  QAAWL +HVG+DA++LLF
Sbjct: 283 IVAAICYAWVLSS-----KADGQAAPAVPVVNMRRSRMGRCRQAAWLLYHVGVDASALLF 337

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
           ADEVD+E L+M  + S+VVVGQDVL++N E+GS CTIL ++  E+   LLQ+  +KK+LL
Sbjct: 338 ADEVDMEGLIMDQRASLVVVGQDVLKSNRELGSVCTILANDHREETSGLLQSLDIKKLLL 397

Query: 121 AGILLDTHNLDSYSSLSTSRDAEAVQLL 148
           AGILLDT+NL   S + + RD+EAVQLL
Sbjct: 398 AGILLDTNNL---SKMCSDRDSEAVQLL 422

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414879091|tpg|DAA56222.1| TPA: hypothetical protein ZEAMMB73_801240 [Zea mays]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 7/130 (5%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           +VAAICYAW+L +       +GDG   VPV+N++RS M    QAAWL +HVG+DA++LLF
Sbjct: 186 IVAAICYAWMLPS-------KGDGQAAVPVVNMRRSRMAWCRQAAWLLYHVGVDASALLF 238

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
            DEVD++ L+M  ++S++VVGQDVL++ AEV S CT LT   CEDAY LLQ   +KK+LL
Sbjct: 239 TDEVDMDGLIMDQRVSLLVVGQDVLKSKAEVASVCTTLTHTYCEDAYSLLQNLDIKKLLL 298

Query: 121 AGILLDTHNL 130
           AG LLDT NL
Sbjct: 299 AGFLLDTSNL 308

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125528790|gb|EAY76904.1| hypothetical protein OsI_04863 [Oryza sativa Indica Group]

 Score =  148 bits (374), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 100/133 (75%), Gaps = 9/133 (6%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           + AAICYAW+L +++       D    VPV+N++R  M +  QAAWL HHVG+DA++LLF
Sbjct: 278 IAAAICYAWMLASKE-------DAEAAVPVVNMRRGRMERCRQAAWLLHHVGVDASALLF 330

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
           ADEVD+E L+M  ++S+VVVGQDVL+ N ++GS CTILT+N CEDAY LLQ+  +KK+LL
Sbjct: 331 ADEVDMEGLMMDKRVSLVVVGQDVLKPNDKMGSVCTILTNNYCEDAYSLLQSLDIKKLLL 390

Query: 121 AGILLDTHNLDSY 133
           A +LLD HN  S+
Sbjct: 391 A-VLLD-HNDHSF 401

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413955569|gb|AFW88218.1| hypothetical protein ZEAMMB73_670957 [Zea mays]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 7/130 (5%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           +VAAICYAW+L +       +GDG   VPV+N+ +S M    QAAWL +HVG+DA++LLF
Sbjct: 182 IVAAICYAWMLPS-------KGDGQAAVPVVNMPQSRMAWCRQAAWLLYHVGVDASALLF 234

Query: 61  ADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQTPVLKKILL 120
            DEVD++ L+M  ++S++VVGQDVL++ AEV S CT LT   CEDAY LLQ   +KK+LL
Sbjct: 235 TDEVDMDGLIMDQRVSLLVVGQDVLKSKAEVASVCTTLTHTYCEDAYSLLQNLDIKKLLL 294

Query: 121 AGILLDTHNL 130
           AGILLDT NL
Sbjct: 295 AGILLDTSNL 304

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
UNIPROTKB|F1SS99	453	PRUNE "Uncharacterized protein	0.458	0.183	0.322	9.5e-08
UNIPROTKB|Q86TP1	453	PRUNE "Protein prune homolog"	0.331	0.132	0.366	5.3e-07
UNIPROTKB|E2RTD5	453	PRUNE "Uncharacterized protein	0.436	0.174	0.305	2.3e-06
UNIPROTKB|Q5E9Y6	453	PRUNE "Protein prune homolog"	0.436	0.174	0.317	2.6e-06
MGI|MGI:1925152	454	Prune "prune homolog (Drosophi	0.436	0.174	0.317	1.3e-05
RGD|1359521	454	Prune "prune homolog (Drosophi	0.436	0.174	0.317	3.3e-05
ZFIN|ZDB-GENE-100609-1	447	prune "prune homolog (Drosophi	0.436	0.176	0.341	0.00061

UNIPROTKB|F1SS99 PRUNE "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 106 (42.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
 Identities = 29/90 (32%), Positives = 47/90 (52%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+  A+ L       +      V VPV+NIKRS +       +    + +  + L+F
Sbjct:    32 MVSALALAFYLAKTTEAEE------VFVPVLNIKRSELPLRGDNVFFLQKIHIPESLLIF 85

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL-RTNA 89
              DE+DL  L   GQL++++V   VL +T+A
Sbjct:    86 RDEIDLHALHQAGQLTLILVDHHVLPKTDA 115

GO:0030145 "manganese ion binding" evidence=IEA

GO:0016462 "pyrophosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q86TP1 PRUNE "Protein prune homolog" [Homo sapiens (taxid:9606)]

 Score = 105 (42.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query:    26 VVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVVGQDVL 85
             V VPV+NIKRS +       +    V +  + L+F DE+DL  L   GQL++++V   +L
Sbjct:    51 VFVPVLNIKRSELPLRGDIVFFLQKVHIPESILIFRDEIDLHALYQAGQLTLILVDHHIL 110

GO:0030145 "manganese ion binding" evidence=IEA

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E2RTD5 PRUNE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 98 (39.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+  A+ L       +      V VPV+NI RS +       +    + +  + L+F
Sbjct:    32 MVSALALAFYLAKTTEAEE------VFVPVLNINRSELPLRGDNVFFLQKIHIPESLLIF 85

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL 85
              DE+DL  L   GQL++++V   VL
Sbjct:    86 RDEIDLHALHQAGQLTLILVDHHVL 110

GO:0030145 "manganese ion binding" evidence=IEA

GO:0016462 "pyrophosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5E9Y6 PRUNE "Protein prune homolog" [Bos taurus (taxid:9913)]

 Score = 103 (41.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 27/85 (31%), Positives = 43/85 (50%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+  A+ L       +      V VPV+NIKRS +       +    + +  + L+F
Sbjct:    32 MVSALALAFYLAKTTEAEE------VFVPVLNIKRSELPLRGDNVFFLQKIHIPESVLIF 85

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL 85
              DE+DL  L   GQL++++V   VL
Sbjct:    86 RDEIDLHALHQAGQLTLILVDHHVL 110

GO:0005925 "focal adhesion" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

MGI|MGI:1925152 Prune "prune homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
 Identities = 27/85 (31%), Positives = 44/85 (51%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+  A+ L     K     D  + +PV+NIKRS +       +    V +   +L+F
Sbjct:    32 MVSALALAFYLT----KTSEAED--IFIPVLNIKRSELPLRGDNVFFLQEVKIPEPALIF 85

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL 85
              DE+DL  L   GQL++++V   +L
Sbjct:    86 RDEIDLLALHQAGQLTLILVDHHIL 110

GO:0003674 "molecular_function" evidence=ND

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016462 "pyrophosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1359521 Prune "prune homolog (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
 Identities = 27/85 (31%), Positives = 45/85 (52%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+  A+ L     K     D  + +PV+NIKRS +       +    V +  ++L+F
Sbjct:    32 MVSALALAFYLT----KTSEAED--IFIPVLNIKRSELPLRGDNVFFLQEVKIAESALIF 85

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL 85
              DE+DL  L   GQL++++V   +L
Sbjct:    86 RDEIDLLALHQAGQLTLILVDHHML 110

GO:0003674 "molecular_function" evidence=ND

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005925 "focal adhesion" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030145 "manganese ion binding" evidence=IEA

ZFIN|ZDB-GENE-100609-1 prune "prune homolog (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 98 (39.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
 Identities = 29/85 (34%), Positives = 44/85 (51%)

Query:     1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
             MV+A+ +A+ L      +K      + VPV+NI R+       + +L    GL  + LLF
Sbjct:    36 MVSALTFAYFL------SKSLDCKRIPVPVLNIPRAEFPLRSDSIFLLRESGLSQDYLLF 89

Query:    61 ADEVDLEILLMTGQLSIVVVGQDVL 85
              DEVDL  L    QL++ +V  +VL
Sbjct:    90 RDEVDLHGLHKNKQLTLTLVDHNVL 114

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0016462 "pyrophosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XV000590 hypothetical protein (657 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
KOG4129	377	consensus Exopolyphosphatases and related proteins	100.0
COG1227	311	PPX1 Inorganic pyrophosphatase/exopolyphosphatase	99.96
PRK05427	308	putative manganese-dependent inorganic pyrophospha	99.92
PRK14869	546	putative manganese-dependent inorganic pyrophospha	99.6
PF01368	145	DHH: DHH family; InterPro: IPR001667 This is a dom	98.91
COG0618	332	Exopolyphosphatase-related proteins [General funct	98.78
PRK14538	838	putative bifunctional signaling protein/50S riboso	98.55
COG3887	655	Predicted signaling protein consisting of a modifi	98.34
cd04597	113	CBS_pair_DRTGG_assoc2 This cd contains two tandem	96.56

>KOG4129 consensus Exopolyphosphatases and related proteins [Energy production and conversion]

Probab=100.00  E-value=4e-42  Score=293.61  Aligned_cols=170  Identities=24%  Similarity=0.383  Sum_probs=153.7

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeeccccchHhhhcCCCeEEEEe
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEILLMTGQLSIVVV   80 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~dd~~~~~l~~~~~~~~~LV   80 (181)
                      ++|||+|||++.+.+      ..+..+||++||||.|+++|+|+.|+|++++|+++.|+|+||++...+...++++++||
T Consensus        36 ~iSaltyAy~l~~~~------~~e~~~vPilnIpR~el~lr~ei~~vl~kl~Ise~~l~FrdDI~~~~~~~~g~l~~~LV  109 (377)
T KOG4129|consen   36 FISALTYAYCLDKVH------RKEVFMVPILNIPRFELNLRTEIFYVLEKLHISESALIFRDDIELLELNISGKLKLYLV  109 (377)
T ss_pred             HHHHHHHHHHHHHhc------cCCceEEEEeccccccCCcchhHHHHHHHcCCChHHeeehhhhhcccccccCCceEEEe
Confidence            379999999999743      25688999999999999999999999999999999999999999998888888999999


Q ss_pred             cCCCCCC------------------------------CccCcchHHHHHHHHhhhccCCCCcHH--HHHHHHhhHHhhhc
Q 038722           81 GQDVLRT------------------------------NAEVGSQCTILTDNSCEDAYDLLQTPV--LKKILLAGILLDTH  128 (181)
Q Consensus        81 DHn~l~~------------------------------~~~vGSc~TLV~~~~~~~~~~~l~~~~--~a~LLl~aIL~DT~  128 (181)
                      |||+++.                              ++.+|||||||++||.++.++..+ .+  +|.||+|+||+||+
T Consensus       110 Dhn~l~~~d~~~e~~~i~~IiDhhp~e~~~~~a~~~~Ie~~gScsTLV~~y~l~~~~~~~~-~~~n~A~LL~g~ILiDt~  188 (377)
T KOG4129|consen  110 DHNVLPSKDLVNEIAVIEGIIDHHPDEDKHLPACPRIIELSGSCSTLVSRYILEELQELNT-RQANLARLLLGPILIDTG  188 (377)
T ss_pred             cCCCCccccccccccceeeeeccCcccccCCCccceeEEeecchHHHHHHHHHhhcchhhh-HHHHHHHHhhcceEEecc
Confidence            9999872                              167899999999999999887543 45  99999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhcCC--CCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          129 NLDSYSSLSTSRDAEAVQLLSIGS--SPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       129 nl~~~~~k~t~~D~~~~~~L~~~~--~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      ||.+  +|++++|.++++.|++..  +.+.|+++|++|         +|+.|+|||||||+.
T Consensus       189 nm~~--ek~s~kd~~~v~kLe~~~p~~l~~r~~~fd~Lk~ak~d~sgls~~~iLrKD~K~~~  248 (377)
T KOG4129|consen  189 NMRK--EKTSPKDVEIVKKLEELFPVKLPERSEFFDELKSAKFDISGLSTDDILRKDLKQFH  248 (377)
T ss_pred             cccc--ccCChhHHHHHHHHHHHcCCCchhHHHHHHHHHHhhcccccCcHHHHHHHHHHHhc
Confidence            9995  799999999999998874  467999999999         999999999999974

>COG1227 PPX1 Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion]

Probab=99.96  E-value=6.1e-29  Score=211.46  Aligned_cols=162  Identities=22%  Similarity=0.278  Sum_probs=132.9

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeeccccc-hHhhhcCC------
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVD-LEILLMTG------   73 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~dd~~-~~~l~~~~------   73 (181)
                      |+|||+|||+++..         +...+|...+++.+.    |+.|+|+.+|.+.+.|+....-+ ...+.+|+      
T Consensus        17 i~Sai~~ay~~~~~---------~~~~~~~~~l~~~~~----et~fvl~~f~~~~p~l~~~~~~~~~viLVDhNe~~qs~   83 (311)
T COG1227          17 IASAIVYAYLLNAY---------GEFEAKAVRLGEPNL----ETAFVLDYFGVEAPKLVESVKGEKKVILVDHNEFQQSV   83 (311)
T ss_pred             HHHHHHHHHHHHHh---------hhccCCceecCCCCh----hHHHHHHHhccCCchhhhcccCCCcEEEEeccccccCc
Confidence            58999999999852         124667776666643    99999999999998777543322 22233332      


Q ss_pred             ----CeE-EEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCCC
Q 038722           74 ----QLS-IVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLST  138 (181)
Q Consensus        74 ----~~~-~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t  138 (181)
                          +.+ +.+||||++.+          .+|||||+|++.++|.+...++  ++++|.|||+|||+||.+|+  +++||
T Consensus        84 ~~~~d~~I~~IIDHHr~~~~~t~~p~~~~~epVGctsTIv~~~~~e~~~~~--~~~iA~LlLsaIlsDTl~fk--spTtt  159 (311)
T COG1227          84 DDIEDAEILGIIDHHRLADFETAAPLYIRNEPVGCTSTIVYRLFKEDGIEI--EKEIAGLLLSAILSDTLLFK--SPTTT  159 (311)
T ss_pred             cccccceEEEEeeeeeecCcccCCCcEEEecCCchHHHHHHHHHHHhcCcc--chhHHHHHHHHHhhhhhccc--CCCcc
Confidence                343 58889999874          4999999999999999888775  58999999999999999999  69999


Q ss_pred             HHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          139 SRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       139 ~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      ++|.++++.|...++..++++|+.+|         +|+.+||+||||+|+
T Consensus       160 ~~D~~~a~~La~lAgv~dlekf~~~ml~a~~~~~~~s~~eLl~~D~K~F~  209 (311)
T COG1227         160 DTDVDIAKELADLAGVKDLEKFGKELLKAGTDLSGKSVEELLKKDLKAFN  209 (311)
T ss_pred             hhHHHHHHHHHHhcCCccHHHHHHHHHHhcCCCCCCCHHHHHHHHhhhcC
Confidence            99999999999988866999999999         789999999999997

>PRK05427 putative manganese-dependent inorganic pyrophosphatase; Provisional

Probab=99.92  E-value=1.8e-24  Score=185.87  Aligned_cols=160  Identities=20%  Similarity=0.175  Sum_probs=121.2

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCC----------eeeccccchHhhh
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANS----------LLFADEVDLEILL   70 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~----------Lif~dd~~~~~l~   70 (181)
                      ++||+++||++.+         .+..++|+..     ..+++|+.++++.+|+..+.          ++.+|--+.....
T Consensus        17 igSalala~~l~~---------~g~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vilVD~~~~~r~~   82 (308)
T PRK05427         17 ICSAIAYAYLKKA---------LGLDAEAVRL-----GEPNPETAFVLDYFGVEAPELITSVAGEVQVILVDHNEFQQSP   82 (308)
T ss_pred             HHHHHHHHHHHHH---------hCCceEEEEC-----CCCCHHHHHHHHHcCCCChhHHhhcccCCeEEEEeCCCcccCc
Confidence            5799999999874         1233667632     26889999999999875432          3333432222211


Q ss_pred             c-CCCe-EEEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCCC
Q 038722           71 M-TGQL-SIVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLST  138 (181)
Q Consensus        71 ~-~~~~-~~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t  138 (181)
                      . ..+. .+.++|||..+.          ++|+|||||+|++++.+...++  ++.+|++|++||+.||+||+.  +++|
T Consensus        83 ~~~~~~~~~~iIDHH~~~~~~~~~p~~~~~~~~gSt~tiv~~~~~~~~~~i--~~~iA~~L~~gIltDT~~F~~--~~tt  158 (308)
T PRK05427         83 DDIDEATVVGVVDHHRLGNFETSNPLYYRIEPVGCTATILYKMFKENGVEI--PKEIAGLMLSAILSDTLLFKS--PTTT  158 (308)
T ss_pred             chhcccCEEEEECCCcCCCCCCCCceEEEEeeeccHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHHHhcccCC--CCCC
Confidence            1 0111 368899999742          3789999999999998776653  579999999999999999994  7899


Q ss_pred             HHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          139 SRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       139 ~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      ++|++++++|.+..| .++++++++|         ++..+||+||||++.
T Consensus       159 ~~d~~~a~~L~~~~g-~d~~~~~~~l~~~~s~~~~~s~~~ll~~dlk~f~  207 (308)
T PRK05427        159 EQDKAAAEELAEIAG-VDIEAYGLEMLKAKSDVSGKSAEELIDMDAKEFE  207 (308)
T ss_pred             HHHHHHHHHHHHHcC-CCHHHHHHHHHHhcCCccCCCHHHHHHhcCeeee
Confidence            999999999997665 3888888888         589999999999873

>PRK14869 putative manganese-dependent inorganic pyrophosphatase; Provisional

Probab=99.60  E-value=2.9e-15  Score=137.24  Aligned_cols=98  Identities=23%  Similarity=0.265  Sum_probs=84.0

Q ss_pred             EEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCCCHHHHHHHH
Q 038722           77 IVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQ  146 (181)
Q Consensus        77 ~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t~~D~~~~~  146 (181)
                      +.++|||.+..          .+++|||||+|+++|.+...++  ++.+|.+|++||+.||++|++  ++||++|+++++
T Consensus       328 ~~iiDHH~~~~~~~~~pi~~~~~~~gst~tiv~~~~~~~~i~~--~~~ia~~ll~gIlsDT~~f~~--~~tt~~d~~~a~  403 (546)
T PRK14869        328 LEIIDHHRLGDIQTSNPIFFRNEPVGSTSTIVARMYRENGIEP--SPEIAGLLLAAILSDTLLFKS--PTTTELDREAAE  403 (546)
T ss_pred             EEEecCCccCCCCCCCCcEEEeeeeeeHHHHHHHHHHHcCCCC--CHHHHHHHHHHHHHHhcCccC--CCCCHHHHHHHH
Confidence            56779998643          2688999999999998876654  579999999999999999994  789999999999


Q ss_pred             HHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          147 LLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       147 ~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      +|.+..+ .+.+++++++         +++.++|++|||++.
T Consensus       404 ~L~~~~g-~~~~~~~~~l~~~~~~~~~~~~~~~l~~d~K~~~  444 (546)
T PRK14869        404 WLAEIAG-IDPEEFAKEMFKAGSSLEGKTPEEIFNRDFKEFT  444 (546)
T ss_pred             HHHHHhC-CCHHHHHHHHHHcCCCcCCCCHHHHHHhcCeeee
Confidence            9998655 4777888777         789999999999875

>PF01368 DHH: DHH family; InterPro: IPR001667 This is a domain of predicted phosphoesterases that includes Drosophila prune protein and bacterial RecJ exonuclease []

Probab=98.91  E-value=7.4e-09  Score=78.27  Aligned_cols=110  Identities=16%  Similarity=0.254  Sum_probs=73.8

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeeccccchHh----hhcCCCeE
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVDLEI----LLMTGQLS   76 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~dd~~~~~----l~~~~~~~   76 (181)
                      ++||+++++++....       .....++.     .....+.+..+.+...++..+.+++.|--....    .......+
T Consensus        21 l~Sa~~l~~~l~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ii~vD~~~~~~~~~~~~~~~~~~   88 (145)
T PF01368_consen   21 LGSAIALAKILKRLG-------KEVTVIPI-----PEGPPHEYFLFVLKYFEMNEDLIILVDCGSPDRDGEKLEELKGIK   88 (145)
T ss_dssp             HHHHHHHHHHHHHTT-------CTEEEEEE-----CSSTCGHHHHHHHHHTTHHHSEEEEES-SSGGGSGTTGGGTSCSE
T ss_pred             HHHHHHHHHHHHHcC-------CCceEEec-----CCCCcchhhhhhhhhhcccceEEEEecCCccccchHHHHhcCCCC
Confidence            479999999887521       22334554     223455566566677666667777777533322    11222368


Q ss_pred             EEEecCCCCCC-----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHH
Q 038722           77 IVVVGQDVLRT-----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGIL  124 (181)
Q Consensus        77 ~~LVDHn~l~~-----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL  124 (181)
                      ++++|||..+.           .+.+||||++|++++.+...++  ++++|.+|+.||+
T Consensus        89 viiiDHH~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~~~~~~~~--~~~~a~ll~~Giv  145 (145)
T PF01368_consen   89 VIIIDHHQPGEEDINPNDVNYIDESAGSTSTLVAEMLKELGIKI--DKEIATLLLAGIV  145 (145)
T ss_dssp             EEEEESSSSBSS---SSCEEEEETSSSHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCcccCCCCCCCCEeCcHHHHHHHHHHHHHHcCCCC--cHHHHHHHHhhhC
Confidence            89999996543           2678999999999998776553  5899999999985

The RecJ protein of Escherichia coli plays an important role in a number of DNA repair and recombination pathways. RecJ catalyzes processive degradation of single-stranded DNA in a 5'-to-3' direction. Sequences highly related to those encoding RecJ can be found in many of the eubacterial genomes sequenced to date [].; GO: 0016787 hydrolase activity, 0030145 manganese ion binding; PDB: 3DEV_A 2HAW_A 1WPN_A 1WPM_B 2IW4_B 1K23_D 2EB0_A 1I74_A 2ZXR_A 2ZXO_A ....

>COG0618 Exopolyphosphatase-related proteins [General function prediction only]

Probab=98.78  E-value=8.9e-08  Score=83.27  Aligned_cols=82  Identities=21%  Similarity=0.290  Sum_probs=64.8

Q ss_pred             eEEEEecCCCC-CC--------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCCCHHHHHHH
Q 038722           75 LSIVVVGQDVL-RT--------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAV  145 (181)
Q Consensus        75 ~~~~LVDHn~l-~~--------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t~~D~~~~  145 (181)
                      -.++.+|||.. ..        ...+|||+|+|++++++....+  .+.+|+.|+.+|..||++|..  .++|++..+++
T Consensus       108 ~~~ivIDHH~~~~~~~~~~~~i~~~~~ataeii~~~~~~~~~~~--~~~~At~L~~GI~tDTg~F~~--~~t~~~~~~~a  183 (332)
T COG0618         108 KKVIVIDHHPGNNDIYGDFVWIDPSAGATAEIIAELLKEAGIDL--DPLVATALLLGIRTDTGRFRY--ANTTADTLAAA  183 (332)
T ss_pred             CceEEEeCCCCCCCCCCceEEeCCCCchHHHHHHHHHHHcCCCc--cHHHHHHHHhhhhhccccccc--CCCChhHHHHH
Confidence            37899999985 22        2568999999999998887664  467999999999999999995  57779999999


Q ss_pred             HHHhcCCCCchHHHHHH
Q 038722          146 QLLSIGSSPNYRNNLFD  162 (181)
Q Consensus       146 ~~L~~~~~~~~r~~lf~  162 (181)
                      .+|.....  +..+.++
T Consensus       184 ~~L~~~g~--~~~~v~~  198 (332)
T COG0618         184 ALLVEAGA--DLLEVLE  198 (332)
T ss_pred             HHHHhCCC--CHHHHHh
Confidence            99976432  3444444

>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional

Probab=98.55  E-value=3.6e-07  Score=88.05  Aligned_cols=72  Identities=22%  Similarity=0.200  Sum_probs=57.8

Q ss_pred             EEEEecCCCCCC---------CccCc-chHHHHHHHHhhhccC-CCCcHHHHHHHHhhHHhhhcCCCCCCCCCCHHHHHH
Q 038722           76 SIVVVGQDVLRT---------NAEVG-SQCTILTDNSCEDAYD-LLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEA  144 (181)
Q Consensus        76 ~~~LVDHn~l~~---------~~~vG-Sc~TLV~~~~~~~~~~-~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t~~D~~~  144 (181)
                      +++++|||....         ++|.+ |||+||++++.....+ .+ ++..|+.|++||+.||.||+.   +||+++.+|
T Consensus       471 ~iIVIDHHr~~~~~i~~~l~yIep~ASST~ELV~Ell~~~~~~i~l-~~~eAt~LyaGI~tDTg~F~~---~Tt~rTFea  546 (838)
T PRK14538        471 NIIVIDHHRATEEIIPSIFSYVDSSASSTVELLVELMGFLEKEIHI-TAFEASIMYAGILIDTNAFIY---RTSSRTFEV  546 (838)
T ss_pred             CEEEEeCCCCCCCCCCccEEEEEcCcCcHHHHHHHHHHHcCCCCCC-CHHHHHHHHhHHHHHcCCccc---CCCHHHHHH
Confidence            589999998643         26665 6889999988543322 13 579999999999999999994   699999999


Q ss_pred             HHHHhcC
Q 038722          145 VQLLSIG  151 (181)
Q Consensus       145 ~~~L~~~  151 (181)
                      +.+|.+.
T Consensus       547 AA~L~~~  553 (838)
T PRK14538        547 ASKLKDL  553 (838)
T ss_pred             HHHHHHc
Confidence            9999874

>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]

Probab=98.34  E-value=1e-06  Score=81.20  Aligned_cols=74  Identities=24%  Similarity=0.303  Sum_probs=58.6

Q ss_pred             EEEEecCCCCCC----------CccC-cchHHHHHHHHhhhc-cCCCCcHHHHHHHHhhHHhhhcCCCCCCCCCCHHHHH
Q 038722           76 SIVVVGQDVLRT----------NAEV-GSQCTILTDNSCEDA-YDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAE  143 (181)
Q Consensus        76 ~~~LVDHn~l~~----------~~~v-GSc~TLV~~~~~~~~-~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~t~~D~~  143 (181)
                      +++++|||+-..          +||- .|++-||+|.+.-.. ..-+ .+-.|+.||++|++||-||+   .||+.|-++
T Consensus       438 kvVViDHHRR~e~f~~n~~l~YiEsyASStsELVTEliqyq~~~~kl-~~ieAt~LlAGI~vDTKnFt---~rTgsRTFd  513 (655)
T COG3887         438 KVVVIDHHRRDEDFISNPLLVYIESYASSTSELVTELIQYQPKKQKL-SPIEATALLAGIIVDTKNFT---LRTGSRTFD  513 (655)
T ss_pred             eEEEEeccccccccccchHHhhhccCcccHHHHHHHHHHhCchhccc-cHHHHHHHHhceEEecccce---eecccceeh
Confidence            489999999653          3664 588889999884322 1123 47999999999999999998   699999999


Q ss_pred             HHHHHhcCCC
Q 038722          144 AVQLLSIGSS  153 (181)
Q Consensus       144 ~~~~L~~~~~  153 (181)
                      ||.+|..+..
T Consensus       514 AAsyLRs~Ga  523 (655)
T COG3887         514 AASYLRSRGA  523 (655)
T ss_pred             HHHHHHhcCC
Confidence            9999987643

>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream

Probab=96.56  E-value=0.0028  Score=45.97  Aligned_cols=48  Identities=21%  Similarity=0.268  Sum_probs=36.1

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeec
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFA   61 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~   61 (181)
                      |||||+||+++++.        ....++|.   ..+  ...+|+.|+|+.+|+..+.++-.
T Consensus         8 i~sai~~~~~~~~~--------~~~~~~~~---~~g--~~n~e~~~vl~~~~~~~p~ll~~   55 (113)
T cd04597           8 VASAIAYAHLKRRQ--------GMDNVTAA---RLG--EPNPQTRYVLEYLGIEPPILLAD   55 (113)
T ss_pred             HHHHHHHHHHHhhc--------CCCceeeh---hcC--CCCHHHHHHHHHcCCCCchhhcc
Confidence            68999999999752        11235675   233  69999999999999988876533

The function of the DRTGG domain, named after its conserved residues, is unknown. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
2qb7_A	397	Exopolyphosphatase; A/B/A structure, DHH family ph	8e-11
2eb0_A	307	Manganese-dependent inorganic pyrophosphatase; DHH	2e-07
1k20_A	310	Manganese-dependent inorganic pyrophosphatase; fam	3e-06
2haw_A	309	Manganese-dependent inorganic pyrophosphatase; sub	5e-06
1wpn_A	188	Manganese-dependent inorganic pyrophosphatase; met	2e-04

>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A* Length = 397

 Score = 58.6 bits (141), Expect = 8e-11
 Identities = 24/182 (13%), Positives = 60/182 (32%), Gaps = 37/182 (20%)

Query: 1   MVAAICYAWLLENRKRKNKGQ--GDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSL 58
           + +AI Y++           +    G  +VP+++I R ++       ++   + +    L
Sbjct: 43  IASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEEL 102

Query: 59  LFADEVDLEI--LLMTGQLSIVVVGQDVL-----------------------------RT 87
            F +++      +    +L+  +V  +                               R 
Sbjct: 103 FFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRI 162

Query: 88  NAEVGSQCTILTDNSCEDAYDLLQTPV-LKKILLAGILLDTHNLDSYSSLSTSRDAEAVQ 146
               GS  +++ +   E      +  + +  +L+  IL+DT N+          D  A++
Sbjct: 163 VKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRRK---VEESDKLAIE 219

Query: 147 LL 148
             
Sbjct: 220 RC 221

>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii} Length = 307

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 47/172 (27%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           + +AI  A+ L+                 + +I         +  ++    G+    L+ 
Sbjct: 15  IASAIVLAYFLD------------CYPARLGDINP-------ETEFVLRKFGVMEPELIE 55

Query: 61  ADEVDLEILLMTGQLS----------IVVV----------GQDVLRTNAEVGSQCTILTD 100
           + +    IL+   + S          ++ +           + +L     VGS  T++ +
Sbjct: 56  SAKGKEIILVDHSEKSQSFDDLEEGKLIAIIDHHKVGLTTTEPILYYAKPVGSTATVIAE 115

Query: 101 NSCEDAYDLLQ------TPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQ 146
              +DA DL+        P L  +LL+ I+ DT    S +  +T  D E  +
Sbjct: 116 LYFKDAIDLIGGKKKELKPDLAGLLLSAIISDTVLFKSPT--TTDLDKEMAK 165

>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A Length = 310

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 22/180 (12%), Positives = 58/180 (32%), Gaps = 41/180 (22%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           + ++  +A+L        +  G     V +              A++  + G+ A  ++ 
Sbjct: 16  IGSSYAFAYLA------REAYGLDTEAVALGEPNEET-------AFVLDYFGVAAPRVIT 62

Query: 61  ADEVDLEILLMT-------------GQLSIVVV-----------GQDVLRTNAEVGSQCT 96
           + + +    ++               ++ +  V              +      VGS  +
Sbjct: 63  SAKAEGAEQVILTDHNEFQQSVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASS 122

Query: 97  ILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNY 156
           I+     E +  +  +  +  ++L+G++ DT  L   S  +   D      L+  +  N 
Sbjct: 123 IVYRMFKEHSVAV--SKEIAGLMLSGLISDTLLLK--SPTTHPTDKAIAPELAELAGVNL 178

>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A* Length = 309

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 46/204 (22%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF 60
           + +AI YA L           G     V +  +         +  +   +   ++  L+ 
Sbjct: 17  ICSAIAYADLKNKL-------GFNAEPVRLGQVNG-------ETQYALDYFKQESPRLVE 62

Query: 61  ADEVDLEILLMT------------GQLSIVVV-----------GQDVLRTNAEVGSQCTI 97
               ++  +++              ++ ++ V            + +      VG   TI
Sbjct: 63  TAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATI 122

Query: 98  LTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYR 157
           L     E+   +     +  ++L+ I+ D+      S   T +D  A + L+  +  +  
Sbjct: 123 LNKMYKENNVKI--EKEIAGLMLSAIISDSLLFK--SPTCTDQDVAAAKELAEIAGVDA- 177

Query: 158 NNLFDQYGSVLEAMRHSYGMPPNE 181
               ++YG  +            E
Sbjct: 178 ----EEYGLNMLKAGADLSKKTVE 197

>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1 Length = 188

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 41/172 (23%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLL- 59
           + +AI YA L           G     V +  +            +   +   ++  L+ 
Sbjct: 17  ICSAIAYADLKNKL-------GFNAEPVRLGQVNGET-------QYALDYFKQESPRLVE 62

Query: 60  -FADEVDLEILLMTGQLS----------IVVV-----------GQDVLRTNAEVGSQCTI 97
             A+EV+  IL+   +            ++ V            + +      VG   TI
Sbjct: 63  TAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATI 122

Query: 98  LTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLLS 149
           L     E+   +     +  ++L+ I+ D+      S   T +D  A + L+
Sbjct: 123 LNKMYKENNVKI--EKEIAGLMLSAIISDSLLF--KSPTCTDQDVAAAKELA 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
2qb7_A	397	Exopolyphosphatase; A/B/A structure, DHH family ph	99.93
2eb0_A	307	Manganese-dependent inorganic pyrophosphatase; DHH	99.88
2haw_A	309	Manganese-dependent inorganic pyrophosphatase; sub	99.87
1k20_A	310	Manganese-dependent inorganic pyrophosphatase; fam	99.86
1wpn_A	188	Manganese-dependent inorganic pyrophosphatase; met	99.77
3dma_A	343	Exopolyphosphatase-related protein; structural gen	99.43
3dev_A	320	SH1221; alpha-beta protein., structural genomics,	99.41
2zxr_A	666	Single-stranded DNA specific exonuclease RECJ; DNA	96.29

>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A*

Probab=99.93  E-value=5.9e-27  Score=205.68  Aligned_cols=174  Identities=14%  Similarity=0.245  Sum_probs=134.2

Q ss_pred             CchHHHHHHHhcccccccCC--CCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeeccccc--------h----
Q 038722            1 MVAAICYAWLLENRKRKNKG--QGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVD--------L----   66 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~--~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~dd~~--------~----   66 (181)
                      |+|||+|||++.+...+..+  ..+...++|++|+||.+.++|+|+.++|+.+|++.+.++|.+++.        .    
T Consensus        43 igSalala~~l~~~gk~~~~~~~~~~~~~v~v~~~~r~~~~~~~e~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  122 (397)
T 2qb7_A           43 IASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELN  122 (397)
T ss_dssp             HHHHHHHHHHHHHHHHSGGGSSSCCCCCCEEECSSCGGGGGGCHHHHHHHHHTTCCGGGSCCHHHHHHHHHHSCTTCEEE
T ss_pred             HHHHHHHHHHHHhcCCccccccccCCccEEEEEcccccccccCHHHHHHHHHcCCChhhcccHHHHHHHHHhhcccCCCe
Confidence            57999999999753200000  002345899999999999999999999999999988888776653        1    


Q ss_pred             HhhhcCC----------CeEEEEecCCCCCC---------CccCcchHHHHHHHHhhh---ccCCCCcHHHHHHHHhhHH
Q 038722           67 EILLMTG----------QLSIVVVGQDVLRT---------NAEVGSQCTILTDNSCED---AYDLLQTPVLKKILLAGIL  124 (181)
Q Consensus        67 ~~l~~~~----------~~~~~LVDHn~l~~---------~~~vGSc~TLV~~~~~~~---~~~~l~~~~~a~LLl~aIL  124 (181)
                      ..+++++          ...+.++|||...+         ++|+|||||||+++|.+.   ..++  ++++|++|++||+
T Consensus       123 vilVD~~~~~r~~~~~~~~~~~iIDHH~~~~~~~~~~~~~i~p~gSt~tlv~~~~~~~~~~~~~i--~~~~A~~L~~gI~  200 (397)
T 2qb7_A          123 SYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEKLQGDREV--VMNIAPLLMGAIL  200 (397)
T ss_dssp             EEEESCSSCCGGGTTTCCEEEEEEECSCCCCCCTTCSSEEECCCSCHHHHHHHHHHHHTTTCHHH--HHHHHHHHHHHHH
T ss_pred             EEEecCCCcccCcccccccEEEEEcCCCCCCCCCCCCccEEeecccHHHHHHHHHHHhhhccCCc--CHHHHHHHHHHHH
Confidence            1123332          12356788888732         268999999999999765   4443  6899999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHhcCC----------CCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          125 LDTHNLDSYSSLSTSRDAEAVQLLSIGS----------SPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       125 ~DT~nl~~~~~k~t~~D~~~~~~L~~~~----------~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      .||+||+   .+||++|++|+.+|.+..          +..+++++|+.|         +++.++|++|||++.
T Consensus       201 ~DT~~F~---~~tt~~d~~aa~~L~~~~~~~~~~~~~~~g~d~~~~~~~l~~a~~~~~~l~l~~~l~~d~K~~~  271 (397)
T 2qb7_A          201 IDTSNMR---RKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKDYKQFN  271 (397)
T ss_dssp             HHTTTTT---SSCCHHHHHHHHHHHHHHHCSCSSCCSHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHTTEEEEE
T ss_pred             HhhcccC---CCCCHHHHHHHHHHHHHhccccccccccCcccHHHHHHHHHHHhhccccCCHHHHHHHhhhhcc
Confidence            9999998   389999999999998763          135788888877         789999999999873

>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii}

Probab=99.88  E-value=1.8e-22  Score=171.37  Aligned_cols=155  Identities=19%  Similarity=0.218  Sum_probs=116.5

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCee---------eccccchHhhhc
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLL---------FADEVDLEILLM   71 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Li---------f~dd~~~~~l~~   71 (181)
                      ++||+++||++.              ..|++     ..++++|+.|+|+.++++.+.++         .+|--+......
T Consensus        15 igSalal~~~l~--------------~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~vilVD~~~~~r~~~   75 (307)
T 2eb0_A           15 IASAIVLAYFLD--------------CYPAR-----LGDINPETEFVLRKFGVMEPELIESAKGKEIILVDHSEKSQSFD   75 (307)
T ss_dssp             HHHHHHHHHHHT--------------SEEEE-----SSCCCHHHHHHHHHHTCCCCEECCCCTTCEEEEESCCCGGGSCT
T ss_pred             HHHHHHHHHHhC--------------CeEEE-----cCCCCHHHHHHHHHcCCCchhhhhhccCCeEEEEeCCCcccchh
Confidence            479999999972              24554     23578999999999998755443         333222221110


Q ss_pred             --CCCeEEEEecCCCCC-C--------CccCcchHHHHHHHHhhhc--------cCCCCcHHHHHHHHhhHHhhhcCCCC
Q 038722           72 --TGQLSIVVVGQDVLR-T--------NAEVGSQCTILTDNSCEDA--------YDLLQTPVLKKILLAGILLDTHNLDS  132 (181)
Q Consensus        72 --~~~~~~~LVDHn~l~-~--------~~~vGSc~TLV~~~~~~~~--------~~~l~~~~~a~LLl~aIL~DT~nl~~  132 (181)
                        ...-.+.++|||..+ .        .+++|||||||++++.+..        .+ + ++++|++|++||+.||+||+.
T Consensus        76 ~~~~~~~~~iIDHH~~~~~~~~~~~~~~~~~gSt~tlv~~~~~~~~~~~~~~~~~~-i-~~~~A~~L~~gI~~DT~~f~~  153 (307)
T 2eb0_A           76 DLEEGKLIAIIDHHKVGLTTTEPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKE-L-KPDLAGLLLSAIISDTVLFKS  153 (307)
T ss_dssp             TGGGSEEEEEEESSCCCCCCSSCCEEEECSSSCHHHHHHHHHHTTCGGGGTCCCCC-C-CHHHHHHHHHHHHHHHTTTTS
T ss_pred             hcccCCEEEEEcCCCCccCCCCCcEEEEeecchHHHHHHHHHHhcCcccccccccc-C-CHHHHHHHHHHHHHHhcCCCC
Confidence              011246789999875 1        2789999999999998765        44 3 589999999999999999994


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCC
Q 038722          133 YSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMP  178 (181)
Q Consensus       133 ~~~k~t~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~  178 (181)
                        +++|++|++++.+|.+..+..+++++++.+         +++.+++++|||.+
T Consensus       154 --~~tt~~d~~aa~~L~~~~g~~d~~~i~~~l~~~~~~~~~~~~~~~l~~d~k~~  206 (307)
T 2eb0_A          154 --PTTTDLDKEMAKKLAEIAGISNIEEFGMEILKAKSVVGKLKPEEIINMDFKNF  206 (307)
T ss_dssp             --TTCCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHGGGGSCHHHHHTTSEEEE
T ss_pred             --CCCCHHHHHHHHHHHhhCCCccHHHHHHHHHHhhcCcccCCHHHHHHHhhhhe
Confidence              689999999999998655544777777666         78899999999976

>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A*

Probab=99.87  E-value=3.3e-22  Score=169.96  Aligned_cols=159  Identities=16%  Similarity=0.167  Sum_probs=117.6

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCC-----------eeeccccchHhh
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANS-----------LLFADEVDLEIL   69 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~-----------Lif~dd~~~~~l   69 (181)
                      ++||+++||++.+.         +..+.|++   .+  ++++|+.|+|+.++++.+.           ++.+|--+....
T Consensus        17 igSalal~~~l~~~---------g~~~~~~~---~~--~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~vilVD~~~~~r~   82 (309)
T 2haw_A           17 ICSAIAYADLKNKL---------GFNAEPVR---LG--QVNGETQYALDYFKQESPRLVETAANEVNGVILVDHNERQQS   82 (309)
T ss_dssp             HHHHHHHHHHHHHT---------TCCEEEEE---SS--CCCHHHHHHHHHTTCCCCEECSCSTTTCSEEEEESCCCGGGS
T ss_pred             HHHHHHHHHHHHHc---------CCCeEEEE---CC--CCCHHHHHHHHHcCCCcHHhhhhccCCCCEEEEEeCCCcccc
Confidence            47999999999852         12267774   22  5789999999999986443           333333222221


Q ss_pred             hc--CCCeEEEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCC
Q 038722           70 LM--TGQLSIVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLS  137 (181)
Q Consensus        70 ~~--~~~~~~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~  137 (181)
                      ..  ...-.+.++|||..+.          .+++|||||||++++.+...++  ++++|++|++||+.||+||+.  +++
T Consensus        83 ~~~~~~~~~~~iIDHH~~~~~~~~~~~~~~~~~~gSt~~lv~~~~~~~~~~i--~~~~A~~L~~gI~~DT~~F~~--~~t  158 (309)
T 2haw_A           83 IKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATILNKMYKENNVKI--EKEIAGLMLSAIISDSLLFKS--PTC  158 (309)
T ss_dssp             CTTGGGSEEEEEEECSCCCSCCCSSCCEEEECCSSCHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHTTTTS--TTC
T ss_pred             hhhhhhcCEEEEECCCcCCCcCCCCCcEEEEccccHHHHHHHHHHHHcCCCC--CHHHHHHHHHHHHHHhcCCCC--CCC
Confidence            10  0112467899998753          2689999999999998776553  589999999999999999994  689


Q ss_pred             CHHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCC
Q 038722          138 TSRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMP  178 (181)
Q Consensus       138 t~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~  178 (181)
                      |++|.+++.+|.+..| .+.+.+++++         +++.+++++|||.+
T Consensus       159 t~~d~~aa~~L~~~~G-~d~~~i~~~l~~~~~~~~~~~~~~~l~~d~k~~  207 (309)
T 2haw_A          159 TDQDVAAAKELAEIAG-VDAEEYGLNMLKAGADLSKKTVEELISLDAKEF  207 (309)
T ss_dssp             CHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHTCCTTCCHHHHTTTTEEEE
T ss_pred             CHHHHHHHHHHHHHcC-CCHHHHHHHHHHhccCcccCCHHHHHHHHHHHH
Confidence            9999999999985344 2566666555         68899999999976

>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A

Probab=99.86  E-value=8.5e-22  Score=167.68  Aligned_cols=159  Identities=16%  Similarity=0.136  Sum_probs=116.8

Q ss_pred             CchHHHHHHHh-cccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCee------------eccccchH
Q 038722            1 MVAAICYAWLL-ENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLL------------FADEVDLE   67 (181)
Q Consensus         1 ivSai~~Ay~~-~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Li------------f~dd~~~~   67 (181)
                      ++||+++||++ .+.     +  .  .+.|+.   .+  ++++|+.|+|+.++++.+.++            .+|--+..
T Consensus        16 igSalal~~~l~~~~-----g--~--~~~~~~---~~--~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~vilVD~~~~~   81 (310)
T 1k20_A           16 IGSSYAFAYLAREAY-----G--L--DTEAVA---LG--EPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQ   81 (310)
T ss_dssp             HHHHHHHHHHHHHHH-----C--C--CEEECB---SS--CCCHHHHHHHHHHTCCCCCBCSCTGGGTCSEEEEESCCCGG
T ss_pred             HHHHHHHHHHHHhcc-----C--C--ceEEEE---CC--CCCHHHHHHHHHcCCCchhhhhhhccccCceEEEEcCCCcc
Confidence            47999999999 641     1  2  266664   23  477999999999998654433            22322222


Q ss_pred             hhhc--CCCeEEEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCC
Q 038722           68 ILLM--TGQLSIVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSS  135 (181)
Q Consensus        68 ~l~~--~~~~~~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~  135 (181)
                      ....  ...-.++++|||..+.          ++|+|||||||++++.+...++  ++++|++|++||+.||+||+.  +
T Consensus        82 r~~~~~~~~~~~~iIDHH~~~~~~~~~~~~~~i~p~gSt~tiv~~~~~~~~~~i--~~~~A~~L~~gI~~DT~~F~~--~  157 (310)
T 1k20_A           82 QSVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKEHSVAV--SKEIAGLMLSGLISDTLLLKS--P  157 (310)
T ss_dssp             GSCTTGGGSEEEEEEECSCCCSCCCSSCCEEEECSSSCHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHTTTTS--T
T ss_pred             cccccccccCEEEEECCCcCCCcCCCCCcEEEEEEccHHHHHHHHHHHHcCCCC--CHHHHHHHHHHHHHHhcCCCC--C
Confidence            1110  0112478899999753          3689999999999998766553  589999999999999999995  7


Q ss_pred             CCCHHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCC
Q 038722          136 LSTSRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMP  178 (181)
Q Consensus       136 k~t~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~  178 (181)
                      ++|++|++++.+|.+..| .+.+.+++++         +|..++|++|||++
T Consensus       158 ~tt~~d~~aa~~L~~~~G-~d~~~i~~~l~~~~sd~~~ls~~~ll~~~lk~~  208 (310)
T 1k20_A          158 TTHPTDKAIAPELAELAG-VNLEEYGLAMLKAGTNLASKSAEELIDIDAKTF  208 (310)
T ss_dssp             TCCHHHHHHHHHHHHHHT-SCHHHHHHHHHHTTCCCTTSCHHHHTTSSEEEE
T ss_pred             CCCHHHHHHHHHHHHHcC-CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhc
Confidence            899999999999985444 3667777666         67799999999975

>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1

Probab=99.77  E-value=8e-18  Score=133.06  Aligned_cols=145  Identities=17%  Similarity=0.173  Sum_probs=103.6

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCC-----------CeeeccccchHhh
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDAN-----------SLLFADEVDLEIL   69 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~-----------~Lif~dd~~~~~l   69 (181)
                      +.||+++++++.+.     +  .  .+.+++  + +  ++++++.|+++.+|++.+           .++.+|--+....
T Consensus        17 igSa~al~~~l~~~-----g--~--~~~~~~--~-~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vi~VD~~~~~r~   82 (188)
T 1wpn_A           17 ICSAIAYADLKNKL-----G--F--NAEPVR--L-G--QVNGETQYALDYFKQESPRLVETAANEVNGVILVDHNERQQS   82 (188)
T ss_dssp             HHHHHHHHHHHHHT-----T--C--CEEEEE--S-S--CCCHHHHHHHHHTTCCCCEECSCSTTTCSEEEEESCCCGGGS
T ss_pred             HHHHHHHHHHHHHh-----C--C--ceEEEE--C-C--CCCHHHHHHHHHcCCCchhhhhhhccCCCeEEEEeCCCcccc
Confidence            47999999998752     1  2  244554  2 2  477999999999888522           2344443333221


Q ss_pred             hc--CCCeEEEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCC
Q 038722           70 LM--TGQLSIVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLS  137 (181)
Q Consensus        70 ~~--~~~~~~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~  137 (181)
                      ..  ...-.++++|||..+.          .+++|||||||++++.+...++  ++++|++|++||+.||+||+.  +++
T Consensus        83 ~~~~~~~~~vivIDHH~~~~~~~~~~~~~~~~~~~St~~lv~~~~~~~~~~i--~~~~A~~l~~gI~~DTg~f~~--~~t  158 (188)
T 1wpn_A           83 IKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATILNKMYKENNVKI--EKEIAGLMLSAIISDSLLFKS--PTC  158 (188)
T ss_dssp             CTTGGGSEEEEEEECSCCCSCCCSSCCEEEECSSSCHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHTTTTS--TTC
T ss_pred             hhhhccCCeEEEECCCCCCCCCCCCCeEEEeccccHHHHHHHHHHHHcCCCC--CHHHHHHHHHHHHHHHhccCC--CCC
Confidence            10  1123578899998643          2689999999999998765553  589999999999999999995  689


Q ss_pred             CHHHHHHHHHHhcCCCCchHHHHHHHh
Q 038722          138 TSRDAEAVQLLSIGSSPNYRNNLFDQY  164 (181)
Q Consensus       138 t~~D~~~~~~L~~~~~~~~r~~lf~~L  164 (181)
                      |++|++++.+|.+..| .+..++++.+
T Consensus       159 t~~~~~~aa~L~~~~g-~d~~~i~~~l  184 (188)
T 1wpn_A          159 TDQDVAAAKELAEIAG-VDAEEYGLNM  184 (188)
T ss_dssp             CHHHHHHHHHHHHHHT-SCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcC-CCHHHHHHHH
Confidence            9999999999985444 3666666655

>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}

Probab=99.43  E-value=1.6e-12  Score=112.08  Aligned_cols=103  Identities=9%  Similarity=0.117  Sum_probs=75.0

Q ss_pred             CCeeeccccchHhhh------cCCCeEEEEecCCCCCC-------Ccc-CcchHHHHHHHHhhhc--cCCCCcHHHHHHH
Q 038722           56 NSLLFADEVDLEILL------MTGQLSIVVVGQDVLRT-------NAE-VGSQCTILTDNSCEDA--YDLLQTPVLKKIL  119 (181)
Q Consensus        56 ~~Lif~dd~~~~~l~------~~~~~~~~LVDHn~l~~-------~~~-vGSc~TLV~~~~~~~~--~~~l~~~~~a~LL  119 (181)
                      +.++.+|--+...+.      ......++++|||..+.       ++| +||||++|++++.+..  .+ + ++.+|++|
T Consensus        93 ~lvi~VD~~~~~r~~~~~~~l~~~~~~~ivIDHH~~~~~~~~~~~i~~~~~ST~eiv~~l~~~~~~~~~-i-~~~~At~L  170 (343)
T 3dma_A           93 DVICCLDFNALKRIDEMSDIVAASPGRKIMIDHHLYPEDFCRITISHPEISSTSELVFRLICRMGYFSD-I-SKEGAECI  170 (343)
T ss_dssp             SEEEEESCSSGGGGTTCHHHHHHCCSEEEEEECCSSCCSCSSEEEECTTSSCHHHHHHHHHHHTTCGGG-C-CHHHHHHH
T ss_pred             CEEEEEeCCChHHhchhHHHHHhCCCCEEEEcCCCCCCCCCceEEEecCcCcHHHHHHHHHHHcCCCCC-C-CHHHHHHH
Confidence            345666654443321      11224678999999764       245 8999999999997654  33 3 58999999


Q ss_pred             HhhHHhhhcCCCCCCCCCCHHHHHHHHHHhcCCCCchHHHHHHHh
Q 038722          120 LAGILLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY  164 (181)
Q Consensus       120 l~aIL~DT~nl~~~~~k~t~~D~~~~~~L~~~~~~~~r~~lf~~L  164 (181)
                      ++||+.||++|+.  +.||++|++++.+|.+. | .+...+++.+
T Consensus       171 ~~GI~tDTg~F~~--~~Tt~~t~~aaa~L~~~-G-ad~~~i~~~l  211 (343)
T 3dma_A          171 YTGMMTDTGGFTY--NSNNREIYFIISELLSK-G-IDKDDIYRKV  211 (343)
T ss_dssp             HHHHHHHTTTTTS--SCCCHHHHHHHHHHHTT-T-CCHHHHHHHH
T ss_pred             HHHHHHHccCCCC--CCCCHHHHHHHHHHHHc-C-CCHHHHHHHH
Confidence            9999999999995  67999999999999883 3 2455555544

>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}

Probab=99.41  E-value=1.9e-12  Score=110.71  Aligned_cols=102  Identities=14%  Similarity=0.081  Sum_probs=73.3

Q ss_pred             CeeeccccchHhhhc---CCCeEEEEecCCCCCC-------Ccc-CcchHHHHHHHHhhh--ccCCCCcHHHHHHHHhhH
Q 038722           57 SLLFADEVDLEILLM---TGQLSIVVVGQDVLRT-------NAE-VGSQCTILTDNSCED--AYDLLQTPVLKKILLAGI  123 (181)
Q Consensus        57 ~Lif~dd~~~~~l~~---~~~~~~~LVDHn~l~~-------~~~-vGSc~TLV~~~~~~~--~~~~l~~~~~a~LLl~aI  123 (181)
                      .++.+|--+...+..   .....++++|||..+.       .+| +||||++|++++...  ..+ + ++++|++|++||
T Consensus        78 lvi~VD~~~~~r~~~~~~~~~~~vivIDHH~~~~~~~~~~~i~p~~~St~eiv~~~~~~~~~~~~-i-~~~~A~~L~~GI  155 (320)
T 3dev_A           78 LVIVCDTANAPRIDDQRYLNGQSLIKIDHHPATDQYGDVNFVNTEASSTSEIIFDFISHFNDLSI-I-DEHVARVLYLGI  155 (320)
T ss_dssp             EEEEESCSSGGGBSSGGGGSSSCEEEEECSCSSCCCSSEEEECTTSSCHHHHHHHHHHTTTCTTT-C-CHHHHHHHHHHH
T ss_pred             EEEEECCCCchhcchhhhhccCCEEEEcCCCCCCCCCCeEEEecCCCcHHHHHHHHHHHhccCCC-C-CHHHHHHHHHHH
Confidence            355666544433211   1123578899998764       255 999999999999643  233 3 589999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHhcCCCCchHHHHHHHh
Q 038722          124 LLDTHNLDSYSSLSTSRDAEAVQLLSIGSSPNYRNNLFDQY  164 (181)
Q Consensus       124 L~DT~nl~~~~~k~t~~D~~~~~~L~~~~~~~~r~~lf~~L  164 (181)
                      +.||++|+.  ++||++|.+++.+|.+. | .+...+++.+
T Consensus       156 ~tDTg~F~~--~~tt~~t~~aaa~L~~~-G-ad~~~i~~~l  192 (320)
T 3dev_A          156 VGDTGRFLF--SNTSPHTMEVASQLLAY-P-FNHNAELNKM  192 (320)
T ss_dssp             HHHTTTTTS--TTCCHHHHHHHHHHHHS-S-SCHHHHHHHH
T ss_pred             HHHccCcCC--CCCCHHHHHHHHHHHHc-C-CCHHHHHHHH
Confidence            999999995  68999999999999873 3 2455555444

>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A

Probab=96.29  E-value=0.0097  Score=55.26  Aligned_cols=74  Identities=12%  Similarity=0.039  Sum_probs=40.7

Q ss_pred             CCeeeccccchHh--h--hcCCCeEEEEecCCCCCCC-------ccC-cc------hH-----HHHHHHHhhhccCCCCc
Q 038722           56 NSLLFADEVDLEI--L--LMTGQLSIVVVGQDVLRTN-------AEV-GS------QC-----TILTDNSCEDAYDLLQT  112 (181)
Q Consensus        56 ~~Lif~dd~~~~~--l--~~~~~~~~~LVDHn~l~~~-------~~v-GS------c~-----TLV~~~~~~~~~~~l~~  112 (181)
                      +.+|++|--....  .  ......+++++|||..+..       +|- .|      |+     .||.+.+.+...++  +
T Consensus       130 ~LIItVD~G~~s~~~i~~a~~~g~~VIViDHH~~~~~~p~a~iVnP~~~s~~~k~L~gaGVaf~Lv~aL~~~l~~~~--~  207 (666)
T 2zxr_A          130 DLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPP--P  207 (666)
T ss_dssp             CEEEESCCC--------------CEEEEECCCC--------CEECGGGSTTCCCCCCHHHHHHHHHHHHHHHTTCCC--C
T ss_pred             CEEEEEcCCchhhhhHHHHHhCCCCEEEECCcCCCCcCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCC--C
Confidence            4566776532211  1  1123468999999986531       332 23      44     34445444333232  4


Q ss_pred             HHHHHHHHhhHHhhhcCCC
Q 038722          113 PVLKKILLAGILLDTHNLD  131 (181)
Q Consensus       113 ~~~a~LLl~aIL~DT~nl~  131 (181)
                      .+++.+++.+|+.||++|+
T Consensus       208 ~~~adlvalGivaDt~~L~  226 (666)
T 2zxr_A          208 LEYADLAAVGTIADVAPLW  226 (666)
T ss_dssp             GGGHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHHHHHHhccccc
Confidence            6899999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1k20a_	310	c.107.1.1 (A:) Manganese-dependent inorganic pyrop	1e-04
d1wpna_	187	c.107.1.1 (A:) Manganese-dependent inorganic pyrop	0.001

>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Streptococcus gordonii [TaxId: 1302]} Length = 310

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Streptococcus gordonii [TaxId: 1302]

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 1   MVAAICYAWLLENRKRKNK-----GQGDGYV--VVPVMNIKRSNMWKHYQAAWLFHHVGL 53
           + ++  +A+L       +      G+ +     V+    +    +    +A      +  
Sbjct: 16  IGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILT 75

Query: 54  DANSL----LFADEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDL 109
           D N          EV++  ++   +++       +      VGS  +I+     E +  +
Sbjct: 76  DHNEFQQSVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKEHSVAV 135

Query: 110 LQTPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAV 145
             +  +  ++L+G++ DT  L   S  +   D    
Sbjct: 136 --SKEIAGLMLSGLISDTLLLK--SPTTHPTDKAIA 167

>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]} Length = 187

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 13/157 (8%)

Query: 1   MVAAICYAWLLENRKRKNKGQGDG-----YVVVPVMNIKRSNMWKHYQAAWLFHHVGLDA 55
           + +AI YA L        +    G              + S       A  +   + +D 
Sbjct: 16  ICSAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQESPRLVETAANEVNGVILVDH 75

Query: 56  NSLLFA----DEVDLEILLMTGQLSIVVVGQDVLRTNAEVGSQCTILTDNSCEDAYDLLQ 111
           N    +    +EV +  ++   +++     + +      VG   TIL     E+  ++  
Sbjct: 76  NERQQSIKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATILNKMYKEN--NVKI 133

Query: 112 TPVLKKILLAGILLDTHNLDSYSSLSTSRDAEAVQLL 148
              +  ++L+ I+ D+      S   T +D  A + L
Sbjct: 134 EKEIAGLMLSAIISDSLLFK--SPTCTDQDVAAAKEL 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1k20a_	310	Manganese-dependent inorganic pyrophosphatase (fam	99.95
d1wpna_	187	Manganese-dependent inorganic pyrophosphatase (fam	99.79

>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Streptococcus gordonii [TaxId: 1302]}

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Streptococcus gordonii [TaxId: 1302]

Probab=99.95  E-value=8.2e-29  Score=209.64  Aligned_cols=161  Identities=16%  Similarity=0.132  Sum_probs=123.9

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeeeccccc---hHhhhcCC----
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLFADEVD---LEILLMTG----   73 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif~dd~~---~~~l~~~~----   73 (181)
                      |+|||+|||++++..        +..+.|+.     ...+++|+.|+++.+|++.+.+++.++..   ...+++++    
T Consensus        16 igSalala~~l~~~~--------g~~~~~~~-----~~~~~~e~~~~l~~~~i~~~~li~~~~~~~~~~vilVDhn~~~~   82 (310)
T d1k20a_          16 IGSSYAFAYLAREAY--------GLDTEAVA-----LGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQQ   82 (310)
T ss_dssp             HHHHHHHHHHHHHHH--------CCCEEECB-----SSCCCHHHHHHHHHHTCCCCCBCSCTGGGTCSEEEEESCCCGGG
T ss_pred             HHHHHHHHHHHHHhC--------CCCeEEEE-----CCCCChHHHHHHHhcCCcchhhhhhhccccCceEEEcCCCChhh
Confidence            589999999987532        12244442     22578999999999999988777654321   11112221    


Q ss_pred             ------CeE-EEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCC
Q 038722           74 ------QLS-IVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSL  136 (181)
Q Consensus        74 ------~~~-~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k  136 (181)
                            +.+ +.++|||..+.          .+|+|||||||+++|.+...++  ++++|++|++||+.||+||+  +++
T Consensus        83 ~~~~~~~~~v~~iIDHH~~~~~~~~~~~~~~~~~~gSt~tlV~~~~~~~~~~i--~~~~A~lLl~gIl~DT~~f~--~~~  158 (310)
T d1k20a_          83 SVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKEHSVAV--SKEIAGLMLSGLISDTLLLK--SPT  158 (310)
T ss_dssp             SCTTGGGSEEEEEEECSCCCSCCCSSCCEEEECSSSCHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHTTTT--STT
T ss_pred             hhhhHhhcceEEEEEecccCCccccCceEEEECCcCcHHHHHHHHHHHhCCCC--CHHHHHHHhhhHhHhhCcCC--CCC
Confidence                  223 56789997653          3789999999999998776664  68999999999999999998  479


Q ss_pred             CCHHHHHHHHHHhcCCCCchHHHHHHHh---------cCHHHHHHhhcCCCC
Q 038722          137 STSRDAEAVQLLSIGSSPNYRNNLFDQY---------GSVLEAMRHSYGMPP  179 (181)
Q Consensus       137 ~t~~D~~~~~~L~~~~~~~~r~~lf~~L---------ls~~dlLrrDyK~~~  179 (181)
                      ||++|++++++|.+.++ .++++||++|         +|+.|+||||||++.
T Consensus       159 tt~~d~~~a~~L~~~~g-~d~~~~~~~l~~ak~~l~~~s~~~il~~D~K~f~  209 (310)
T d1k20a_         159 THPTDKAIAPELAELAG-VNLEEYGLAMLKAGTNLASKSAEELIDIDAKTFE  209 (310)
T ss_dssp             CCHHHHHHHHHHHHHHT-SCHHHHHHHHHHTTCCCTTSCHHHHTTSSEEEEE
T ss_pred             CCHHHHHHHHHHHHhcc-CCHHHHHHHHHHhcCccccCCHHHHHHHhhhhcc
Confidence            99999999999988765 4788888888         899999999999874

>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=7.9e-19  Score=136.61  Aligned_cols=145  Identities=16%  Similarity=0.134  Sum_probs=101.5

Q ss_pred             CchHHHHHHHhcccccccCCCCCCceEEEeeeccccCCCCchHHHHHHHHcCCCCCCeee-----------ccccchHhh
Q 038722            1 MVAAICYAWLLENRKRKNKGQGDGYVVVPVMNIKRSNMWKHYQAAWLFHHVGLDANSLLF-----------ADEVDLEIL   69 (181)
Q Consensus         1 ivSai~~Ay~~~~~~~~~~~~~~~~~~vPvini~r~d~~lr~E~~~ll~~~~I~~~~Lif-----------~dd~~~~~l   69 (181)
                      ++||++||+++++..       .+...+..     .  .+++|+.|+++.++++...+..           .|.-+...+
T Consensus        16 igSalal~~~l~~~g-------~~~~i~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~~~~~   81 (187)
T d1wpna_          16 ICSAIAYADLKNKLG-------FNAEPVRL-----G--QVNGETQYALDYFKQESPRLVETAANEVNGVILVDHNERQQS   81 (187)
T ss_dssp             HHHHHHHHHHHHHTT-------CCEEEEES-----S--CCCHHHHHHHHHTTCCCCEECSCSTTTCSEEEEESCCCGGGS
T ss_pred             HHHHHHHHHHHHHhC-------CCeEEEEC-----C--CCCHHHHHHHHHcCCcccccccccccccceeeecccCChhcc
Confidence            479999999998521       22212221     2  3679999999999986644332           222222221


Q ss_pred             hc--CCCeEEEEecCCCCCC----------CccCcchHHHHHHHHhhhccCCCCcHHHHHHHHhhHHhhhcCCCCCCCCC
Q 038722           70 LM--TGQLSIVVVGQDVLRT----------NAEVGSQCTILTDNSCEDAYDLLQTPVLKKILLAGILLDTHNLDSYSSLS  137 (181)
Q Consensus        70 ~~--~~~~~~~LVDHn~l~~----------~~~vGSc~TLV~~~~~~~~~~~l~~~~~a~LLl~aIL~DT~nl~~~~~k~  137 (181)
                      ..  ...-.++++|||....          .+++||||++|++++.+...++  ++++|++|++||+.||+||+.  +++
T Consensus        82 ~~~~~~~~~v~vIDHH~~~~~~~~~~~~~~~~~~sst~~iv~~l~~~~~~~i--~~~~A~~L~~gI~tDTg~F~~--~~t  157 (187)
T d1wpna_          82 IKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCTATILNKMYKENNVKI--EKEIAGLMLSAIISDSLLFKS--PTC  157 (187)
T ss_dssp             CTTGGGSEEEEEEECSCCCSCCCSSCCEEEECSSSCHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHTTTTS--TTC
T ss_pred             hhHHhhcCcEEEEecccccccCcccceeeecCccccHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHHhCcCCC--CCC
Confidence            11  1123467899997542          2679999999999887776553  589999999999999999985  678


Q ss_pred             CHHHHHHHHHHhcCCCCchHHHHHHHh
Q 038722          138 TSRDAEAVQLLSIGSSPNYRNNLFDQY  164 (181)
Q Consensus       138 t~~D~~~~~~L~~~~~~~~r~~lf~~L  164 (181)
                      |++|++++.+|.+.+| .+.++++++|
T Consensus       158 t~~~~~~a~~L~~~~g-~d~~~~~~~~  183 (187)
T d1wpna_         158 TDQDVAAAKELAEIAG-VDAEEYGLNM  183 (187)
T ss_dssp             CHHHHHHHHHHHHHHT-SCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcC-CCHHHHHHHH
Confidence            9999999999988544 3566666655