Citrus Sinensis ID: 038725

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEEccccccEEEEEEcccccccccccEEEEEEcccccEEEEEEEEEccccccccccccccccccEEEcccEEEEcccEEEEEcccEEEEEEEEEEccccccEEEEccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHcHcccccccccHHcHccccccccEEEEEEcccccEEEEEEEEcccccccEEEEEEccccccccccEEEEEEEcccccEEEEEEEEEcccccccccccccccccEEcccccEEEEccccEEEEcccEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQkcmtlptqqaSLAWTFHAhnatldlcffgtfispsgwvgwginpsspemtgtralvafpdpnsgqlvllpyildptvklqkspllsrpldinlisssatlyggkmatihngaSVQIFATlklspnktkihhvwnrglyvqgysptihpttsndlssiatidvmsgstaaqhsNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Flexible Loop (DISEMBL)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Low Complexity Region (SEG)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Disordered region (IsUnstruct)
**LLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINP*****TGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQA****
Disordered Region (DISOPRED)
MSLLFFFFLYTSHLRVVLS*******ATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYIL****************DINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQG************************************RMVHGIINAVAWGVLLPIGAVTARYLRHIQ*****
Disordered Region (DISEMBL)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Disordered Region (DISPRO)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
Q94BT2	252	Auxin-induced in root cul	no	no	0.606	0.587	0.282	8e-10

>sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3

 Score = 64.3 bits (155), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 24  TITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPS----GWVGWGINPSSP 79
            + +   F  C  LP   + L +T+++ N++L + F  T   PS    GWV W INP+  
Sbjct: 33  NLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVAT---PSQANGGWVAWAINPTGT 89

Query: 80  EMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDI-NLISSSATLYGGKMA 138
           +M G++A +A+        V+  Y +     L +  L     D  NL + S  L GG++A
Sbjct: 90  KMAGSQAFLAYRSGGGAAPVVKTYNISSYSSLVEGKLA---FDFWNLRAES--LSGGRIA 144

Query: 139 TIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSS 188
                    IF T+K+      ++ VW  G  V    P +HP   ++L S
Sbjct: 145 ---------IFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGS 185

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
224131728	402	predicted protein [Populus trichocarpa]	0.950	0.577	0.818	1e-110
255582443	399	dopamine beta-monooxygenase, putative [R	0.950	0.581	0.788	1e-109
224068855	400	predicted protein [Populus trichocarpa]	0.950	0.58	0.823	1e-108
356551564	392	PREDICTED: uncharacterized protein LOC10	1.0	0.622	0.75	1e-108
356501723	397	PREDICTED: uncharacterized protein LOC10	0.938	0.576	0.786	1e-107
255641599	392	unknown [Glycine max]	1.0	0.622	0.745	1e-107
255644579	397	unknown [Glycine max]	0.938	0.576	0.781	1e-107
449453738	400	PREDICTED: uncharacterized protein LOC10	0.954	0.582	0.759	1e-106
359485809	400	PREDICTED: uncharacterized protein LOC10	0.930	0.567	0.770	1e-106
449506930	458	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.954	0.508	0.759	1e-106

>gi|224131728|ref|XP_002321163.1| predicted protein [Populus trichocarpa] gi|222861936|gb|EEE99478.1| predicted protein [Populus trichocarpa]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/232 (81%), Positives = 212/232 (91%)

Query: 13  HLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGW 72
           H+R   S+HCS  T TKTF+KCMTLPTQQAS+AWTFHAHNATLDL F GTFISPSGWVGW
Sbjct: 15  HVRTAFSAHCSITTPTKTFEKCMTLPTQQASIAWTFHAHNATLDLVFSGTFISPSGWVGW 74

Query: 73  GINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATL 132
           GINPSS EMTGTRAL+AFPDPNSGQLVLLP+ILDPTVKLQKSP LSRPLDI+L+SSSATL
Sbjct: 75  GINPSSAEMTGTRALIAFPDPNSGQLVLLPFILDPTVKLQKSPPLSRPLDIHLLSSSATL 134

Query: 133 YGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATI 192
           YGGKMATIHNGA++Q++ATLKL PNKTKIH VWNRGLYVQGYSP IHPTTSNDLSSIATI
Sbjct: 135 YGGKMATIHNGAAIQVYATLKLVPNKTKIHFVWNRGLYVQGYSPAIHPTTSNDLSSIATI 194

Query: 193 DVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           DV+SG +AA   + +TL++ HGI+NA++WGVLLPIGA TARYLRHIQALGP+
Sbjct: 195 DVLSGFSAAHRDDTRTLKIAHGILNAISWGVLLPIGAATARYLRHIQALGPT 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582443|ref|XP_002532009.1| dopamine beta-monooxygenase, putative [Ricinus communis] gi|223528340|gb|EEF30382.1| dopamine beta-monooxygenase, putative [Ricinus communis]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/232 (78%), Positives = 212/232 (91%)

Query: 13  HLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGW 72
           H    +S+HC+T+T++KTF+KCMT PTQQ S+AWTFH HN+TLDL FFG FISPSGWVGW
Sbjct: 13  HFHNAISAHCTTVTSSKTFEKCMTFPTQQTSMAWTFHKHNSTLDLVFFGAFISPSGWVGW 72

Query: 73  GINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATL 132
           GINP+SPEM GTRAL+AFPDPNSGQLV+LPYILDPTVKLQKSPLLSRPLD++L+SSSATL
Sbjct: 73  GINPTSPEMAGTRALIAFPDPNSGQLVVLPYILDPTVKLQKSPLLSRPLDVHLLSSSATL 132

Query: 133 YGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATI 192
           YGGKMA+IHNGA+VQI+AT++LSPNKTK+H VWNRGLYVQGYSPTIHPTTSNDLSSIATI
Sbjct: 133 YGGKMASIHNGAAVQIYATIRLSPNKTKLHFVWNRGLYVQGYSPTIHPTTSNDLSSIATI 192

Query: 193 DVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           DV+SG  AA   N + L+++HGI NA++WGVLLP GAVTARYLRHIQALGP+
Sbjct: 193 DVLSGFNAAHKDNTRMLKIIHGIANAISWGVLLPTGAVTARYLRHIQALGPA 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068855|ref|XP_002302842.1| predicted protein [Populus trichocarpa] gi|222844568|gb|EEE82115.1| predicted protein [Populus trichocarpa]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/232 (82%), Positives = 209/232 (90%)

Query: 13  HLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGW 72
           ++R   S+HCST T TKTF+KCM LPTQQAS+AWTFHAHNATLDL FFGTFISPSGWVGW
Sbjct: 13  YVRTAFSAHCSTTTPTKTFEKCMALPTQQASMAWTFHAHNATLDLVFFGTFISPSGWVGW 72

Query: 73  GINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATL 132
           GINPSS EMTGTRALVAFPDPNSG LVLLP+ILDPTVKLQKSP LSRPLDI L+SSSATL
Sbjct: 73  GINPSSAEMTGTRALVAFPDPNSGLLVLLPFILDPTVKLQKSPPLSRPLDIQLLSSSATL 132

Query: 133 YGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATI 192
           YGGKMATIHNGA+VQI+AT KL  NKTKIH VWNRGLYVQGYSP IHPTTS+DLSSIATI
Sbjct: 133 YGGKMATIHNGAAVQIYATFKLVRNKTKIHLVWNRGLYVQGYSPAIHPTTSSDLSSIATI 192

Query: 193 DVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           DV+ G +AA   + +TL+ VHGI+NAV+WGVLLPIGAVTARYLRHIQALGP+
Sbjct: 193 DVLYGFSAAHKDDTRTLKTVHGILNAVSWGVLLPIGAVTARYLRHIQALGPA 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551564|ref|XP_003544144.1| PREDICTED: uncharacterized protein LOC100775680 [Glycine max]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/244 (75%), Positives = 218/244 (89%)

Query: 1   MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFF 60
           M +L +  L  S   + LSSHC+  TATKTF+KCM LPTQQAS+AWTFH HN+TL+L FF
Sbjct: 1   MLILLYLSLVCSLPHIALSSHCTVETATKTFEKCMNLPTQQASIAWTFHPHNSTLELVFF 60

Query: 61  GTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRP 120
           G+FISPSGWVGWGINP+SPEMTGTRAL+AFPDPNSGQ+VLL YILDPTVKLQKSPLLSRP
Sbjct: 61  GSFISPSGWVGWGINPTSPEMTGTRALIAFPDPNSGQIVLLSYILDPTVKLQKSPLLSRP 120

Query: 121 LDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHP 180
           LDI+L+SS+A +YGGKMAT+HNGA++QIF T+KL  NKTKIH VWNRGLYVQGYSPTIHP
Sbjct: 121 LDIHLLSSTAAMYGGKMATVHNGAAIQIFGTVKLQTNKTKIHLVWNRGLYVQGYSPTIHP 180

Query: 181 TTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQA 240
           TTS DL+SIAT DV+SGS+A QH+++ TLR++HG +NA++WG+LLP+GA+TARYLRHIQA
Sbjct: 181 TTSTDLASIATFDVLSGSSAPQHTDLTTLRVIHGTVNAISWGILLPMGAITARYLRHIQA 240

Query: 241 LGPS 244
           LGP+
Sbjct: 241 LGPA 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501723|ref|XP_003519673.1| PREDICTED: uncharacterized protein LOC100799859 [Glycine max]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 180/229 (78%), Positives = 212/229 (92%)

Query: 16  VVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGIN 75
           + LSSHC+  TATKTF+KCM LPTQQAS+AWTFH HN+TL+L FFG+FISPSGWVGWGIN
Sbjct: 16  IALSSHCTVETATKTFKKCMNLPTQQASIAWTFHPHNSTLELVFFGSFISPSGWVGWGIN 75

Query: 76  PSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGG 135
           P+SPEMTGTRAL+AFPDPNSGQ+VLLPYILDPTVKLQKSPLLSRPLDI+L+SS+AT+YGG
Sbjct: 76  PTSPEMTGTRALIAFPDPNSGQIVLLPYILDPTVKLQKSPLLSRPLDIHLLSSTATMYGG 135

Query: 136 KMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVM 195
           KMAT+HNGA++QI  T+KL  NKTKIH VWNRGLYVQGYSPTIHPTTS DLSSI T DV+
Sbjct: 136 KMATVHNGAAIQILGTVKLQTNKTKIHLVWNRGLYVQGYSPTIHPTTSTDLSSIVTFDVL 195

Query: 196 SGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           SGS+A QH+++ TLR++HG +NA++WG+LLP+GA+TARYLRHIQALGP+
Sbjct: 196 SGSSAPQHTDLTTLRVIHGTVNAISWGILLPMGAITARYLRHIQALGPA 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641599|gb|ACU21072.1| unknown [Glycine max]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/244 (74%), Positives = 217/244 (88%)

Query: 1   MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFF 60
           M +L +  L  S   + LSSHC+  TATKTF+KCM LPTQQAS+AWTFH HN+TL+L FF
Sbjct: 1   MLILLYLSLVCSLPHIALSSHCTVETATKTFEKCMNLPTQQASIAWTFHPHNSTLELVFF 60

Query: 61  GTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRP 120
           G+FISPSGWVGWGINP+SPEMTGTRAL+AFPDPNSGQ+VLL YILDPTVKLQKSPLLSRP
Sbjct: 61  GSFISPSGWVGWGINPTSPEMTGTRALIAFPDPNSGQIVLLSYILDPTVKLQKSPLLSRP 120

Query: 121 LDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHP 180
           LDI+L+SS+A +YGGKMAT+HNGA++QIF T+KL  NKTKIH VWNRGLYVQGYSPTIHP
Sbjct: 121 LDIHLLSSTAAMYGGKMATVHNGAAIQIFGTVKLQTNKTKIHLVWNRGLYVQGYSPTIHP 180

Query: 181 TTSNDLSSIATIDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQA 240
           TTS DL+SIAT DV+SGS+A QH+++ TLR++HG +NA++WG+LLP+GA+TARYL HIQA
Sbjct: 181 TTSTDLASIATFDVLSGSSAPQHTDLTTLRVIHGTVNAISWGILLPMGAITARYLTHIQA 240

Query: 241 LGPS 244
           LGP+
Sbjct: 241 LGPA 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644579|gb|ACU22792.1| unknown [Glycine max]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 179/229 (78%), Positives = 211/229 (92%)

Query: 16  VVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGIN 75
           + LSSHC+  TATKTF+KCM LPTQQAS+AWTFH HN+TL+L FFG+FISPSGWVGWGIN
Sbjct: 16  IALSSHCTVETATKTFKKCMNLPTQQASIAWTFHPHNSTLELVFFGSFISPSGWVGWGIN 75

Query: 76  PSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGG 135
           P+SPEMTGTRAL+AFPDPNSGQ+VLLPYILDPTVKLQKSPLLSRPLDI+L+SS+AT+YGG
Sbjct: 76  PTSPEMTGTRALIAFPDPNSGQIVLLPYILDPTVKLQKSPLLSRPLDIHLLSSTATMYGG 135

Query: 136 KMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVM 195
           KM T+HNGA++QI  T+KL  NKTKIH VWNRGLYVQGYSPTIHPTTS DLSSI T DV+
Sbjct: 136 KMVTVHNGAAIQILGTVKLQTNKTKIHLVWNRGLYVQGYSPTIHPTTSTDLSSIVTFDVL 195

Query: 196 SGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           SGS+A QH+++ TLR++HG +NA++WG+LLP+GA+TARYLRHIQALGP+
Sbjct: 196 SGSSAPQHTDLTTLRVIHGTVNAISWGILLPMGAITARYLRHIQALGPA 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453738|ref|XP_004144613.1| PREDICTED: uncharacterized protein LOC101209946 [Cucumis sativus]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 177/233 (75%), Positives = 213/233 (91%)

Query: 12  SHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVG 71
           S + V L++HC+T+TA KTFQ+CM LPTQQAS+AWTFH HNATLDL FFG FISPSGWVG
Sbjct: 13  SSISVALAAHCTTVTAIKTFQQCMNLPTQQASIAWTFHLHNATLDLVFFGNFISPSGWVG 72

Query: 72  WGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSAT 131
           WGINP+SP MTG R L+AF DPNSGQ+V+LPY+LDPTVKLQ++PLLSRPLDI L+SSSA 
Sbjct: 73  WGINPTSPGMTGARVLIAFSDPNSGQIVVLPYVLDPTVKLQRTPLLSRPLDIRLLSSSAA 132

Query: 132 LYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIAT 191
           LYGGKMAT+HNGA++QI+ATLKL PNKTKIH +WNRGLYVQGYSPTIHPTTS+DLSSIAT
Sbjct: 133 LYGGKMATVHNGAAIQIYATLKLIPNKTKIHLIWNRGLYVQGYSPTIHPTTSDDLSSIAT 192

Query: 192 IDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           +DV SG+ A+Q ++I+TL+++HGI+NA++WG+LLPIGAVTARYLRH+Q LGP+
Sbjct: 193 LDVASGTAASQTNDIETLKVIHGILNAISWGLLLPIGAVTARYLRHVQTLGPA 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485809|ref|XP_002262661.2| PREDICTED: uncharacterized protein LOC100253083 [Vitis vinifera]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 175/227 (77%), Positives = 211/227 (92%)

Query: 18  LSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPS 77
           +S+HC+TITATKTF+KCMTLPTQQAS+AWTFH HNATLDL FFG+FISP+GWVGWGINP+
Sbjct: 19  ISAHCTTITATKTFEKCMTLPTQQASIAWTFHPHNATLDLVFFGSFISPTGWVGWGINPT 78

Query: 78  SPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKM 137
           S EMTGT AL+A+PDPN+G LV+LPY+LDPTVKLQ+SPLLSRPLD++L+SSSA +YGG+M
Sbjct: 79  SAEMTGTHALIAYPDPNTGLLVVLPYVLDPTVKLQRSPLLSRPLDLHLLSSSAIMYGGRM 138

Query: 138 ATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSG 197
           AT+HNGA++QI+ATLKL PN+TKIHHVWNRGLYVQGYSPTIHPTT NDL S ATID++SG
Sbjct: 139 ATVHNGAAIQIYATLKLVPNRTKIHHVWNRGLYVQGYSPTIHPTTINDLLSTATIDILSG 198

Query: 198 STAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           ST   H NI+TL++ HGIINA++WG+LLP+GA +ARYLRHIQ++GPS
Sbjct: 199 STGFTHDNIQTLKIAHGIINAISWGILLPLGAFSARYLRHIQSMGPS 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506930|ref|XP_004162887.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209946 [Cucumis sativus]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 177/233 (75%), Positives = 213/233 (91%)

Query: 12  SHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVG 71
           S + V L++HC+T+TA KTFQ+CM LPTQQAS+AWTFH HNATLDL FFG FISPSGWVG
Sbjct: 71  SSISVALAAHCTTVTAIKTFQQCMNLPTQQASIAWTFHLHNATLDLVFFGXFISPSGWVG 130

Query: 72  WGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSAT 131
           WGINP+SP MTG R L+AF DPNSGQ+V+LPY+LDPTVKLQ++PLLSRPLDI L+SSSA 
Sbjct: 131 WGINPTSPGMTGARVLIAFSDPNSGQIVVLPYVLDPTVKLQRTPLLSRPLDIRLLSSSAA 190

Query: 132 LYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIAT 191
           LYGGKMAT+HNGA++QI+ATLKL PNKTKIH +WNRGLYVQGYSPTIHPTTS+DLSSIAT
Sbjct: 191 LYGGKMATVHNGAAIQIYATLKLIPNKTKIHLIWNRGLYVQGYSPTIHPTTSDDLSSIAT 250

Query: 192 IDVMSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
           +DV SG+ A+Q ++I+TL+++HGI+NA++WG+LLPIGAVTARYLRH+Q LGP+
Sbjct: 251 LDVASGTAASQTNDIETLKVIHGILNAISWGLLLPIGAVTARYLRHVQTLGPA 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
TAIR|locus:2049254	404	AT2G04850 [Arabidopsis thalian	0.991	0.599	0.706	1.8e-94
TAIR|locus:2077690	466	AT3G59070 [Arabidopsis thalian	0.860	0.450	0.310	2.7e-28
TAIR|locus:2168948	395	AT5G47530 [Arabidopsis thalian	0.926	0.572	0.313	1e-27
TAIR|locus:2156559	255	AT5G48750 [Arabidopsis thalian	0.893	0.854	0.310	3.5e-27
TAIR|locus:505006660	404	AT5G35735 "AT5G35735" [Arabido	0.827	0.5	0.349	5.7e-27
TAIR|locus:2123271	394	AT4G12980 "AT4G12980" [Arabido	0.963	0.596	0.326	2.5e-26
TAIR|locus:2090240	393	AT3G25290 "AT3G25290" [Arabido	0.942	0.585	0.315	8.4e-26
TAIR|locus:2130789	402	AT4G17280 [Arabidopsis thalian	0.848	0.514	0.313	3.6e-25
TAIR|locus:2076770	398	AT3G61750 [Arabidopsis thalian	0.635	0.389	0.271	7.3e-06
TAIR|locus:2091097	369	AT3G07570 [Arabidopsis thalian	0.897	0.593	0.229	4.1e-05

TAIR|locus:2049254 AT2G04850 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 173/245 (70%), Positives = 207/245 (84%)

Query:     3 LLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGT 62
             L F   L  + L   L+ HC+T TATK+F+KC++LPTQQAS+AWT+H HNATLDLCFFGT
Sbjct:     6 LSFLLLLLATKLPESLAGHCTTTTATKSFEKCISLPTQQASIAWTYHPHNATLDLCFFGT 65

Query:    63 FISPSGWVGWGINPSSP-EMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPL 121
             FISPSGWVGWGINP SP +MTG+R L+AFPDPNSGQL+LLPY+LD +VKLQK PLLSRPL
Sbjct:    66 FISPSGWVGWGINPDSPAQMTGSRVLIAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPL 125

Query:   122 D-INLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHP 180
             D + L SSSA+LYGGKMATI NGASVQI+A++KLS N TKIHHVWNRGLYVQGYSPTIHP
Sbjct:   126 DLVRLSSSSASLYGGKMATIRNGASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHP 185

Query:   181 TTSNDLSSIATIDVMSG-STAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQ 239
             TTS DLSS +T DV SG +T  Q+S  + L++ HG++NA++WG LLP GAVTARYLR +Q
Sbjct:   186 TTSTDLSSFSTFDVTSGFATVNQNSGSRALKVTHGVVNAISWGFLLPAGAVTARYLRQMQ 245

Query:   240 ALGPS 244
             ++GP+
Sbjct:   246 SIGPT 250

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077690 AT3G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.7e-28, P = 2.7e-28
 Identities = 72/232 (31%), Positives = 126/232 (54%)

Query:    20 SHCSTITAT--KTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPS 77
             S C + +    K+F+ C  L    + L + +      L++ +  + +  S W+ W INP+
Sbjct:    35 SRCESYSFNNGKSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAINPT 94

Query:    78 SPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQK-SPLLSR-PLDINLISSSATLYGG 135
             S  M G +ALVA+ +  SG  V+  Y    T  +   SP+L   PL + +   SA    G
Sbjct:    95 SKGMVGAQALVAYRNSTSG--VMRAY----TSSINSYSPMLQESPLSLRVTQVSAEYSNG 148

Query:   136 KMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVM 195
             +M          IFATL L PN T ++H+W  G   +G    +H  + ++L S+A++D++
Sbjct:   149 EM---------MIFATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLL 199

Query:   196 SG---STAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
             SG   +T + + N+  ++ +H I+NA++WG+L+PIG + ARY+++ + L P+
Sbjct:   200 SGQVTTTKSVNRNMLLVKQIHAIVNALSWGILMPIGVMAARYMKNYEVLDPT 251

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2168948 AT5G47530 [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 79/252 (31%), Positives = 130/252 (51%)

Query:     1 MSLLFFFFLYTSHLRVVLSSHCST--ITATKTFQKCMTLPTQQASLAWTFHAHNATLDLC 58
             + L  F F+ T   +  L+  CS    +  + F+ C  LP   + L +T+ + +  L + 
Sbjct:     9 LCLSLFIFIIT---KSALAQKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIA 65

Query:    59 FFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLS 118
             +  T ++P  WV W +NP+S  M G +A+VA+P  +     +  Y   P    Q S LL 
Sbjct:    66 YRHTKLTPGKWVAWAVNPTSTGMVGAQAIVAYPQSDG---TVRAYT-SPISSYQTS-LLE 120

Query:   119 RPLDINLISSSATLYGGKMATIHNGASVQIFATLKLS-PNKTKIHHVWNRGLYVQGYSPT 177
               L  N+   SAT    +M          I+A L L   N   I+ VW  G  + G +P 
Sbjct:   121 AELSFNVSQLSATYQNNEMV---------IYAILNLPLANGGIINTVWQDGS-LSGNNPL 170

Query:   178 IHPTTSNDLSSIATIDVMSG-----STAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTA 232
              HPT+ N++ S++T++++SG     ST A  ++    R +HGI+N V+WG+++PIGA+ A
Sbjct:   171 PHPTSGNNVRSVSTLNLVSGASGSTSTGAGGASKLRKRNIHGILNGVSWGIMMPIGAIIA 230

Query:   233 RYLRHIQALGPS 244
             RYL+  ++  P+
Sbjct:   231 RYLKVSKSADPA 242

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2156559 AT5G48750 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 74/238 (31%), Positives = 121/238 (50%)

Query:    11 TSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWV 70
             T+ ++V   SH       K F+ C+ LP   + L +++      L++ +  T I  S W+
Sbjct:    27 TNEVQVSCDSH--NFNNGKHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSSWI 84

Query:    71 GWGINPSSPEMTGTRALVAFPDPNSGQL-VLLPYILDPTVKLQKSPLLSRPLDINLISSS 129
              WGINP+S  M G + L+A+ +  SG +      I   T  LQ+ PL  R   +     S
Sbjct:    85 AWGINPTSKGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQL-----S 139

Query:   130 ATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSI 189
             A     +M          IFAT+    N T ++H+W  G   +G    +H  + N L S+
Sbjct:   140 AEYLNREMT---------IFATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSM 190

Query:   190 ATIDVMSG---STAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
             A +D++SG   +T A + N+  ++ +HG++NAV WG+ +PIG + ARY+R  + L P+
Sbjct:   191 ANLDLLSGQVMTTKAANDNMLLVKSIHGLVNAVCWGIFIPIGVMAARYMRTYKGLDPT 248

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0030198 "extracellular matrix organization" evidence=ISS

TAIR|locus:505006660 AT5G35735 "AT5G35735" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 78/223 (34%), Positives = 113/223 (50%)

Query:    20 SHCST--ITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPS 77
             S C+T   T    F  C  L    + L WT++  N T+ + +     S S WV WG+NPS
Sbjct:    27 SLCNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASSWVAWGLNPS 86

Query:    78 SPEMTGTRALVAFPDPNSGQL-VLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGK 136
             S +M GT+ALVAF +  + Q       +     +L++S L        +   SATL  G+
Sbjct:    87 STQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSL-----SFGVSGLSATLVSGE 141

Query:   137 MATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMS 196
                      V IFATL+LSPN    + +W  G  V G  P  H T+ +++ S   ID  +
Sbjct:   142 ---------VTIFATLELSPNLITANQLWQVGPVVNGV-PASHQTSGDNMRSSGRIDFRT 191

Query:   197 GSTAAQHSNI-KTLRM--VHGIINAVAWGVLLPIGAVTARYLR 236
             G  +A        LR    HG++NAV+WGVL+P+GA+ ARY++
Sbjct:   192 GQASAGGGGSGDRLRKRNTHGVLNAVSWGVLMPMGAMMARYMK 234

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2123271 AT4G12980 "AT4G12980" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 83/254 (32%), Positives = 126/254 (49%)

Query:     1 MSLLFFFFLYTSHLRVVLSSHCS--TITATKTFQKCMTLPTQQASLAWTFHAHNATLDLC 58
             +SL F F+       V  SS CS  T +  K++  C+ LP  +A L +++ A N TL + 
Sbjct:     8 ISLSFLFWALLLSPAVSQSSSCSSQTFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVV 67

Query:    59 FFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLS 118
             F      P GW+ W INP S  M G++ALVA  DP++G   +    +     L  S L  
Sbjct:    68 FSAPPSKPGGWIAWAINPKSTGMAGSQALVASKDPSTGVASVTTLNIVSYSSLVPSKLSF 127

Query:   119 RPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTI 178
                D+   +  A   GG +      A V++ A L  S    K++ VW  G  V       
Sbjct:   128 DVWDVK--AEEAANDGGALRIF---AKVKVPADLAASG---KVNQVWQVGPGVSNGRIQA 179

Query:   179 HPTTSNDLSSIATIDV--------MSGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAV 230
             H  +  +L+S+ ++D+        +SG   A +S I   R +HGI+NAV+WG+L PIGA+
Sbjct:   180 HDFSGPNLNSVGSLDLTGTTPGVPVSGGGGAGNSRIHK-RNIHGILNAVSWGLLFPIGAM 238

Query:   231 TARYLRHIQALGPS 244
              ARY+R  ++  P+
Sbjct:   239 IARYMRIFESADPA 252

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2090240 AT3G25290 "AT3G25290" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 81/257 (31%), Positives = 130/257 (50%)

Query:     1 MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFF 60
             +SL F F        V  +    T +  KT+  C+ LP  +A L +++ A N TL + F 
Sbjct:     9 ISLSFIFLALLISPAVSQTCKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFS 68

Query:    61 GTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQK-SPLLSR 119
                  P GW+ W INP +  M G++ LVA+ DP +G  V+       T+ +   S L+  
Sbjct:    69 APPAKPGGWIAWAINPKATGMVGSQTLVAYKDPGNGVAVV------KTLNISSYSSLIPS 122

Query:   120 PLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPN---KTKIHHVWNRGLYVQGYSP 176
              L  ++    A           +G S++IFA +K+  +   K K++ VW  G  + G   
Sbjct:   123 KLAFDVWDMKAE------EAARDGGSLRIFARVKVPADLVAKGKVNQVWQVGPEL-GPGG 175

Query:   177 TI--HPTTSNDLSSIATIDVM---SGSTAAQ----HSNIKTLRMVHGIINAVAWGVLLPI 227
              I  H   S +L+S++++D+    SG T +     ++ IK  R +HGI+NAV+WG+L PI
Sbjct:   176 MIGRHAFDSANLASMSSLDLKGDNSGGTISGGDEVNAKIKN-RNIHGILNAVSWGILFPI 234

Query:   228 GAVTARYLRHIQALGPS 244
             GA+ ARY+R   +  P+
Sbjct:   235 GAIIARYMRVFDSADPA 251

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2130789 AT4G17280 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 73/233 (31%), Positives = 122/233 (52%)

Query:    22 CST--ITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSP 79
             CS    ++   F  C  LP   + L +T+ +   +L + +  T ++   WV W +NP+S 
Sbjct:    34 CSKYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWVAWAVNPTST 93

Query:    80 EMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATL-YGGKMA 138
              M G +A+VA+P              D TV++  SP+  R    +L+    +    G  A
Sbjct:    94 GMVGAQAIVAYPQS------------DGTVRVYTSPI--RSYQTSLLEGDLSFNVSGLSA 139

Query:   139 TIHNGASVQIFATLKLSP---NKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVM 195
             T  N   V + A+LKL+    N   I+ VW  G  + G S   HPT+ N++ S++T++++
Sbjct:   140 TYQNNEIV-VLASLKLAQDLGNGGTINTVWQDGS-MSGNSLLPHPTSGNNVRSVSTLNLV 197

Query:   196 SGSTAAQH----SNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRHIQALGPS 244
             SG +AA      S+    R +HGI+N V+WG+++P+GA+ ARYLR  ++  P+
Sbjct:   198 SGVSAAAGGAGGSSKLRKRNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPA 250

GO:0005576 "extracellular region" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2076770 AT3G61750 [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 47/173 (27%), Positives = 79/173 (45%)

Query:    67 SGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLI 126
             +GWVG G +     M G+ A++ +     G   +  Y L  T + Q  P     L +  +
Sbjct:    88 TGWVGIGFSKEG-RMVGSSAMIGWIS-KKGHAKIKQYYLQGTERDQVVPDQGE-LQLQKV 144

Query:   127 SSSATLYGGKMATIHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDL 186
                  L+G   A I+    V+ FA +++ P +  I        +   Y   +   T +D 
Sbjct:   145 PPVVALHG---AMIYLAFQVK-FA-VRV-PRRAVIL------AFSTAYPSKLGRLTKHDD 192

Query:   187 SSIATIDVM--SGSTAAQHSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRH 237
              +   +D    SG+T+ + +   T +  HG++  + WG LLP+GA+ ARYLRH
Sbjct:   193 KTTVIVDFSKASGATSIK-TTTSTEKTKHGVMAILGWGFLLPVGAILARYLRH 244

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2091097 AT3G07570 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 57/248 (22%), Positives = 110/248 (44%)

Query:     1 MSLLFFFFLYTSHLRVVLSSHCSTITATKTFQ-KCMTLPTQ--QASLAWT---F---HAH 51
             +S++ F  +  S   +V +   +T +   T     +T  T   Q + AWT   F   +A 
Sbjct:     6 VSIIIFVLIALS--TIVNAQQAATDSCNSTLPLNDLTFNTSLLQCTEAWTPQNFILRYAR 63

Query:    52 NATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKL 111
              A     F  +    S ++G G + +  +M G+ A+V +   + G   + PY+L      
Sbjct:    64 TAENTWSFILSAPDSSAFIGIGFSTNG-QMIGSSAIVGWIPSDGGSGTVKPYLLGG---- 118

Query:   112 QKSPLLSRPLDINLISSSATLYGG--KMATIHNGASVQIFATLKLSPNKTKIHHVWNRGL 169
              KSP      ++N      T+  G  K+ ++ +   ++   T  L P ++ ++ V   G 
Sbjct:   119 -KSPG-----EVNPDQGDLTIVNGSLKIESVSSRLYMRFQLTATL-PRQSLLYAVGPAGF 171

Query:   170 YVQGYSPTIHPTTSNDLSSIATIDVMSGS-TAAQHSNIKTLRMVHGIINAVAWGVLLPIG 228
             +    SP       +   +  TI+  +GS +  + S    L+  HG++N   WG+L+ +G
Sbjct:   172 FPS--SPDFR-LREHRFVTTTTINYNTGSQSVVKVSPHSKLKKTHGLMNMFGWGILIIVG 228

Query:   229 AVTARYLR 236
             A+ AR+++
Sbjct:   229 AIVARHMK 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      244       244   0.00098  113 3  11 22  0.39    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  186 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.73u 0.18s 20.91t   Elapsed:  00:00:00
  Total cpu time:  20.73u 0.18s 20.91t   Elapsed:  00:00:00
  Start:  Thu May  9 15:14:59 2013   End:  Thu May  9 15:14:59 2013

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00141092 hypothetical protein (402 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	244
cd09629	152	cd09629, DOMON_CIL1_like, DOMON-like domain of Bra	8e-58
pfam04526	101	pfam04526, DUF568, Protein of unknown function (DU	4e-31
smart00664	148	smart00664, DoH, Possible catecholamine-binding do	6e-15
cd08760	191	cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrom	3e-06

>gnl|CDD|187687 cd09629, DOMON_CIL1_like, DOMON-like domain of Brassica carinata CIL1 and similar proteins

 Score =  180 bits (458), Expect = 8e-58
 Identities = 72/166 (43%), Positives = 93/166 (56%), Gaps = 14/166 (8%)

Query: 31  FQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAF 90
           F  C  LPT  ASL WT++A N+TLD+ F  T  S SGWV WGINP+   M GT+ALVAF
Sbjct: 1   FAACNDLPTLGASLHWTYNASNSTLDVAFRATPPSSSGWVAWGINPTGTGMVGTQALVAF 60

Query: 91  PDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFA 150
            + N   LV   Y +    KL +      PL  ++   SA   GG+M          IFA
Sbjct: 61  RNSNGSVLV-YTYNITSYTKLGEPL----PLSFDVSDLSAEYSGGEM---------TIFA 106

Query: 151 TLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMS 196
           TLKL  N T ++HVW  G  V G SP  HPT+  +L+S  T+D+++
Sbjct: 107 TLKLPSNLTSVNHVWQVGPAVTGGSPGPHPTSGANLASKGTLDLLT 152

Brassica carinata CIL1 has been described as involved in suppression of axillary meristem development. It contains a single DOMON domain, the function of which is unclear. Members in this diverse family of plant proteins may have a cytochrome b561 domain C-terminal to the DOMON domain, some members from Arabidopsis have been characterized as auxin-responsive or auxin-induced proteins. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases. Length = 152

>gnl|CDD|191019 pfam04526, DUF568, Protein of unknown function (DUF568)

 Score =  110 bits (276), Expect = 4e-31
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 15/115 (13%)

Query: 81  MTGTRALVAFPDPNSGQLVLLPYILDPTVK-LQKSPLLSRPLDINLISSSATLYGGKMAT 139
           M G++ALVAF D +SG + +    +      LQ+ PL     D+  +S+  +        
Sbjct: 1   MVGSQALVAFRDSSSGAVRVYTSNISSYSTSLQEGPL---SFDVPDLSAEES-------- 49

Query: 140 IHNGASVQIFATLKLSPNKTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDV 194
                 V IFATLKL  N TK++ VW  G  V G SP IHPT+ ++L S+ T+D+
Sbjct: 50  ---NGEVTIFATLKLPANTTKVNQVWQVGPVVTGGSPGIHPTSGDNLRSMGTLDL 101

Family of uncharacterized plant proteins. Length = 101

>gnl|CDD|214768 smart00664, DoH, Possible catecholamine-binding domain present in a variety of eukaryotic proteins

 Score = 69.4 bits (170), Expect = 6e-15
 Identities = 31/169 (18%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 39  TQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQL 98
           +    L+W+    N ++     G   + +GWV  G +P    M G   +VA+ D N    
Sbjct: 1   SCDYFLSWSVDGEN-SIAFELSGPTST-NGWVAIGFSPDGQ-MAGADVVVAWVDNNG--- 54

Query: 99  VLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPN- 157
                     V ++          +       T      AT  NG         KL  N 
Sbjct: 55  ---------RVTVKDYYTPGYGPPVEDDQQDVTDL--LSATYENGVLT-CRFRRKLGSND 102

Query: 158 -------KTKIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDVMSGST 199
                     +H +W +G          H  +   L S   + + S + 
Sbjct: 103 PDDKSLLDGTVHVLWAKGPLSPNGGLGYHDFS---LKSTKKVCLSSCTG 148

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press). Length = 148

>gnl|CDD|176490 cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrome b(561), including the FRRS1 gene product

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 11/58 (18%)

Query: 191 TIDVMSGSTAAQ-----------HSNIKTLRMVHGIINAVAWGVLLPIGAVTARYLRH 237
           ++D+ SG++++              +  TL   HG++ A+AWG+L+PIGA+ ARY   
Sbjct: 6   SLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARYFLL 63

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 191

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
KOG4293	403	consensus Predicted membrane protein, contains DoH	99.96
PF04526	101	DUF568: Protein of unknown function (DUF568); Inte	99.92
smart00664	148	DoH Possible catecholamine-binding domain present	99.82
PF03351	124	DOMON: DOMON domain; InterPro: IPR005018 The DOMON	99.57
cd00241	184	CDH_cytochrome Cellobiose dehydrogenase (Cellobios	99.01
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	98.27
KOG3568	603	consensus Dopamine beta-monooxygenase [Amino acid	97.25
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	96.67
PLN02351	242	cytochromes b561 family protein	84.77

>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]

Probab=99.96  E-value=4.1e-29  Score=235.23  Aligned_cols=223  Identities=35%  Similarity=0.618  Sum_probs=184.1

Q ss_pred             HHHHhhhhcccccC--Ccc--cccCCcccCcccccCCCCcEEEEEEecCCceEEEEEEEecCCCCceEEEEECCCCCCCC
Q 038725            7 FFLYTSHLRVVLSS--HCS--TITATKTFQKCMTLPTQQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMT   82 (244)
Q Consensus         7 ~~~~~~~~~~~~~~--~C~--~~~~~~~~~~C~~l~~~~~~L~wt~~~~~~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~   82 (244)
                      |.|..++..++.++  .|.  ++..++.|..|.++|++++++|++|++++++++++|+++.  ...|++|+|||++.+|+
T Consensus         8 ~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~c~~lp~~~~~i~~~~~~~~~~~~i~~~~~~--~~~w~~~~~~p~~t~m~   85 (403)
T KOG4293|consen    8 FALLFSLTSPAFSQTDTCSSQTFNIDKSFDSCVDLPTLNSFIHYTYNSANGVLSIAFSAPL--SSAWVAWAINPTGTGMV   85 (403)
T ss_pred             HhHHHhccCchhhhhcceeeeeccCCccccccccCCCCCceEEEEEecCCCeEEEEEecCC--cccccccccCCcccccc
Confidence            33333444454444  698  8888999999999999999999999999999999999974  34499999999998899


Q ss_pred             CCcEEEEEecCCCCeeEEEEEeecCccccccCCCCCCCcceeeccCcccccCCceeEEEcCCE---EEEEEEEeeC-CCC
Q 038725           83 GTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGAS---VQIFATLKLS-PNK  158 (244)
Q Consensus        83 Gs~a~Va~~~~~~G~~~v~~y~l~g~~~~~~~~~~~~~l~~~v~~~~~~~~~g~~s~~~~~~~---~~if~t~~l~-~~~  158 (244)
                      |++++|++..+.+|...+++|++.+    +.+...+..+.+++.+.         .++.....   +.+|++++++ .+.
T Consensus        86 ~~~~~va~~~~~~g~~~~~t~~~~~----~~~s~~~~~~~~~~~~~---------~~~~~~~~~~~~~if~~~~l~~~~~  152 (403)
T KOG4293|consen   86 GSRALVAYAGSSSGATTVKTYVILG----YSPSLVPALLSFTLGNV---------RAECNLRSSSPIGIFASFKLAGANG  152 (403)
T ss_pred             ccceeeeeeccccchhhceeeeecc----cchhhcccccceeeecC---------cchhhccCCCCceEEEEEEeecCCC
Confidence            9999999999668999999999999    75545556677777776         55564444   7899999999 678


Q ss_pred             CceeEEEeeccccC-CCCCccCCCCCCCCcceEEEEeec--Ccccc-c----cCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 038725          159 TKIHHVWNRGLYVQ-GYSPTIHPTTSNDLSSIATIDVMS--GSTAA-Q----HSNIKTLRMVHGIINAVAWGVLLPIGAV  230 (244)
Q Consensus       159 ~~~~~Iwa~G~~~~-~~~~~~H~~~~~n~~s~~~ldl~s--G~~~~-~----~~~~~~~~~~HG~Lm~vaWgvLlPiG~i  230 (244)
                      ..++++|++|+... ++.+.+|.....+..+...+|+..  |.... .    .....++++.||++|+++|++|+|+|++
T Consensus       153 ~~~~~~w~~~~~~~~g~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~hgil~~~sw~il~p~g~i  232 (403)
T KOG4293|consen  153 GKYSAVWQVGPTGSGGGRPKRHKLSGSNLASVTSLDLTSDIGELSITSEGNFNSSGLKLRMTHGILNALSWGILFPAGAI  232 (403)
T ss_pred             ceeEEEEEccCCccCCCCCccCccccCCccceeecccccccccccccccCcccCcchhccccHHHHhhhhhheeccccce
Confidence            89999999998764 789999999999999999999987  43322 1    2333467777999999999999999999


Q ss_pred             HHHhhccccccCCC
Q 038725          231 TARYLRHIQALGPS  244 (244)
Q Consensus       231 ~ARYlk~~~~~dPa  244 (244)
                      +|||+|+++.+||.
T Consensus       233 ~ary~~~~~~~~~~  246 (403)
T KOG4293|consen  233 IARYLRQKPSGDPT  246 (403)
T ss_pred             eEEEecccCCCCcc
Confidence            99999999888874

>PF04526 DUF568: Protein of unknown function (DUF568); InterPro: IPR017214 This group represents an uncharacterised conserved protein

Probab=99.92  E-value=5.9e-25  Score=169.68  Aligned_cols=100  Identities=39%  Similarity=0.638  Sum_probs=95.7

Q ss_pred             CCCCcEEEEEecCCC-CeeEEEEEeecCccccccCCCCCCCcceeeccCcccccCCceeEEEcCCEEEEEEEEeeCCCCC
Q 038725           81 MTGTRALVAFPDPNS-GQLVLLPYILDPTVKLQKSPLLSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKT  159 (244)
Q Consensus        81 M~Gs~a~Va~~~~~~-G~~~v~~y~l~g~~~~~~~~~~~~~l~~~v~~~~~~~~~g~~s~~~~~~~~~if~t~~l~~~~~  159 (244)
                      |+|++||||+++ ++ |.+.+++|.|++    |.+.+.+++|+|++++.         ++|+++++|+||++++||.+.+
T Consensus         1 M~GtqALvAf~~-~~~G~~~v~T~~i~s----y~~~l~~~~lsf~v~~l---------sae~~~~~~~IfAtl~Lp~n~t   66 (101)
T PF04526_consen    1 MVGTQALVAFKN-SNGGSVTVYTYNITS----YSPSLQPGPLSFDVSDL---------SAEYSGGEMTIFATLKLPGNST   66 (101)
T ss_pred             CCCceEEEEEeC-CCCceEEEEEEeecc----cccccccccccccccce---------EeEEeCCEEEEEEEEEcCCCCc
Confidence            999999999999 65 999999999999    87778999999999999         9999999999999999999999


Q ss_pred             ceeEEEeeccccCCCCCccCCCCCCCCcceEEEEe
Q 038725          160 KIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATIDV  194 (244)
Q Consensus       160 ~~~~Iwa~G~~~~~~~~~~H~~~~~n~~s~~~ldl  194 (244)
                      ++|||||+|+.+.++.|.+|+++++|++|+++|||
T Consensus        67 ~vnhVWQ~G~~v~gg~p~~H~~~~~Nl~S~gtldl  101 (101)
T PF04526_consen   67 SVNHVWQVGPSVQGGSPQPHPTSGANLQSKGTLDL  101 (101)
T ss_pred             EEEEEeCcCCccCCCccccCCCCCccccceEEecC
Confidence            99999999999988999999999999999999997

>smart00664 DoH Possible catecholamine-binding domain present in a variety of eukaryotic proteins

Probab=99.82  E-value=7.8e-19  Score=143.05  Aligned_cols=136  Identities=20%  Similarity=0.353  Sum_probs=105.2

Q ss_pred             CcEEEEEEecCCceEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEeecCccccccCCCCCCC
Q 038725           41 QASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPLLSRP  120 (244)
Q Consensus        41 ~~~L~wt~~~~~~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~l~g~~~~~~~~~~~~~  120 (244)
                      +..|+|+++.+ ++|.|+++++.. +.||||||||+++. |.|+|++|||.+ ++|.+.+++|++++    +..+...  
T Consensus         3 ~~~l~W~~~~~-~~v~~~l~~~~~-~~gwvaiGfs~~~~-M~~~d~vv~~~~-~~g~~~v~d~~~~~----~~~~~~d--   72 (148)
T smart00664        3 DYFLSWSVDGE-NSIAFELSGPTS-TNGWVAIGFSPDGQ-MAGADVVVAWVD-NNGRVTVKDYYTPG----YGPPVED--   72 (148)
T ss_pred             eEEEEEEECCC-CeEEEEEEEecC-CCCEEEEEECCCCC-cCCCCEEEEEEc-CCCCEEEEEEEcCC----CCCCCcC--
Confidence            45689999987 899999999632 39999999999965 999999999998 77999999999999    6543222  


Q ss_pred             cceeeccCcccccCCceeEEEcCCEEEEEEEEeeCCCCC--------ceeEEEeeccccCCCCCccCCCCCCCCcceEEE
Q 038725          121 LDINLISSSATLYGGKMATIHNGASVQIFATLKLSPNKT--------KIHHVWNRGLYVQGYSPTIHPTTSNDLSSIATI  192 (244)
Q Consensus       121 l~~~v~~~~~~~~~g~~s~~~~~~~~~if~t~~l~~~~~--------~~~~Iwa~G~~~~~~~~~~H~~~~~n~~s~~~l  192 (244)
                      ...++.+.  +      .+++.++.++|.++++|.++++        ..++|||.|+...++.+..|...   ..+..++
T Consensus        73 ~~~~~~~~--~------~~~~~~g~~~~~f~R~l~t~d~~d~~~~~~~~~~i~a~G~~~~~~~~~~H~~~---~~~~~~i  141 (148)
T smart00664       73 DQQDVTDL--L------SATYENGVLTCRFRRKLGSNDPDDKSLLDGTVHVLWAKGPLSPNGGLGYHDFS---LKSTKKV  141 (148)
T ss_pred             cccccccc--e------eEEEECCEEEEEEEEEccCCCccccccCCCeEEEEEEECCCCCCCCeeecccc---ccCceEE
Confidence            22222221  0      4566899999988999987653        78999999984346789999863   3577888


Q ss_pred             EeecC
Q 038725          193 DVMSG  197 (244)
Q Consensus       193 dl~sG  197 (244)
                      ++.+.
T Consensus       142 ~~~~~  146 (148)
T smart00664      142 CLSSC  146 (148)
T ss_pred             EeccC
Confidence            88764

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press).

>PF03351 DOMON: DOMON domain; InterPro: IPR005018 The DOMON domain is an 110-125 residue long domain which has been identified in the physiologically important enzyme dopamine beta-monooxygenase and in several other secreted and transmembrane proteins from both plants and animals

Probab=99.57  E-value=1.4e-13  Score=108.29  Aligned_cols=109  Identities=22%  Similarity=0.398  Sum_probs=83.9

Q ss_pred             CcEEEEEEecCCceEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEe-ecCccccccCC-CCC
Q 038725           41 QASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYI-LDPTVKLQKSP-LLS  118 (244)
Q Consensus        41 ~~~L~wt~~~~~~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~-l~g~~~~~~~~-~~~  118 (244)
                      +..|.|+++.++.+|.|+++++. +..||||+||++++. |.++|+++|+.+ + |.+.+++|+ ..+    +.+| +++
T Consensus         4 ~~~l~w~~~~~~~~i~~~l~~~~-~~~~w~aiGfs~~~~-M~~~Dvv~~~~~-~-~~~~v~d~~~~~~----~~~p~~d~   75 (124)
T PF03351_consen    4 NFSLSWTVDGDNNTIEFELTGPA-NTNGWVAIGFSDDGG-MGGSDVVVCWVD-D-GKVYVQDYYSTGG----YGPPTVDD   75 (124)
T ss_pred             eEEEEEEEECCCCEEEEEEEecc-CCCCEEEEEEccccC-CCCCcEEEEEEc-C-CceeEEEeeccCc----ccceeecc
Confidence            34589999998899999999853 248999999999887 999999999997 4 899999999 888    6533 332


Q ss_pred             C-CcceeeccCcccccCCceeEEEcCCEEEEEEEEeeCCC---------CCceeEEEeec
Q 038725          119 R-PLDINLISSSATLYGGKMATIHNGASVQIFATLKLSPN---------KTKIHHVWNRG  168 (244)
Q Consensus       119 ~-~l~~~v~~~~~~~~~g~~s~~~~~~~~~if~t~~l~~~---------~~~~~~Iwa~G  168 (244)
                      . .-++  ...         ++.+.++.++|-++++|.+.         ..++++|||+|
T Consensus        76 ~~~~~~--~~~---------~~~~~~g~~~~~F~R~l~t~d~~d~~l~~~~~~~~i~A~G  124 (124)
T PF03351_consen   76 QGSQDI--QLL---------SGSYSNGTTTCSFTRPLNTGDSQDYDLDSNGTYYVIWAYG  124 (124)
T ss_pred             ccCCcE--EEE---------EEEEECCEEEEEEEEEccCCCCCccEecCCCcEEEEEEeC
Confidence            2 1222  223         55667888888778887662         35678999987

It has been named after DOpamine beta-MOnooxygenase N-terminal domain. The DOMON domain can be found in one to four copies and in association with other domains, such as the Cu-ascorbate dependent monooxygenase domain, the epidermal growth factor domain, the trypsin inhibitor-like domain (TIL), the SEA domain and the Reelin domain. The architectures of the DOMON domain proteins strongly suggest a function in extracellular adhesion []. The sequence conservation is predominantly centred around patches of hydrophobic residues. The secondary structure prediction of the DOMON domain points to an all-beta-strand fold with seven or eight core strands supported by a buried core of conserved hydrophobic residues. There is a chraracteristic motif with two small positions (Gly or Ser) corresponding to a conserved turn immediately C-terminal to strand three. It has been proposed that the DOMON domain might form a beta-sandwich structure, with the strands distributed into two beta sheets as is seen in many extracellular adhesion domains such as the immunoglobulin, fibronectin type III, cadherin and PKD domains [].

>cd00241 CDH_cytochrome Cellobiose dehydrogenase (CellobioseDH), cytochrome domain; This extracellular fungal oxidoreductase degrades both lignin and cellulose

Probab=99.01  E-value=8.9e-09  Score=87.77  Aligned_cols=123  Identities=17%  Similarity=0.248  Sum_probs=80.9

Q ss_pred             ceEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEeecCccccccCC-CCCCCcceeeccCccc
Q 038725           53 ATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSP-LLSRPLDINLISSSAT  131 (244)
Q Consensus        53 ~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~l~g~~~~~~~~-~~~~~l~~~v~~~~~~  131 (244)
                      ..+-+.+++  |.+.||+|+|.   |.+|.|+.++|+|.+ ++ ++++..|+.+|    |.+| ...++..++++..++|
T Consensus        40 ~d~i~qi~a--P~~~gW~gls~---Gg~M~~~~L~vaw~~-g~-~Vt~S~R~atg----~~~P~~y~g~a~~t~L~gs~v  108 (184)
T cd00241          40 TEFIGELVA--PRASGWIGLAL---GGAMTNSLLLVAWPN-GN-QIVSSTRYATG----YTLPDAYTGPATITQLPSSSV  108 (184)
T ss_pred             CCEEEEEeC--cCCCCeEEEee---cccCCCCeEEEEEcC-CC-eEEEeEEEecC----ccCCCccCCCceEEECCCCcE
Confidence            345555655  57799999999   888999999999997 54 59999999999    8755 5677777877765333


Q ss_pred             ccCCceeEEE--cCCEEEEEEEEe----eCCCCCceeEEEeecccc------CCCCCccCCCCCCCCcceEEEEeecCc
Q 038725          132 LYGGKMATIH--NGASVQIFATLK----LSPNKTKIHHVWNRGLYV------QGYSPTIHPTTSNDLSSIATIDVMSGS  198 (244)
Q Consensus       132 ~~~g~~s~~~--~~~~~~if~t~~----l~~~~~~~~~Iwa~G~~~------~~~~~~~H~~~~~n~~s~~~ldl~sG~  198 (244)
                       .++.+.+++  +||     .++.    +..+... .++||.++..      ++..+.+|+     ..+.+.+||....
T Consensus       109 -n~t~~t~~~rC~nC-----~~W~~gg~~~~t~~~-~~~wA~~~~~~~~p~~~~a~i~~Hd-----~~G~f~~dl~~A~  175 (184)
T cd00241         109 -NSTHWKLVFRCQNC-----TSWNNGGGIDPTSQG-VLAWAFSNVAVDDPSDPQSTFSEHT-----DFGFFGINLSDAQ  175 (184)
T ss_pred             -eCCEEEEEEEeCCC-----cccCCCCccCcCCCc-eEEEEECCCCCCCCCCcccCCceec-----CCcceeEechhcc
Confidence             122222222  222     1111    1111222 6899986221      256688998     3467999998654

It is a hemoflavoenzyme that is comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The 2 domains can be separated proteolytically. The cytochrome domain folds as a beta sandwich and complexes a heme molecule.

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=98.27  E-value=2.1e-06  Score=73.04  Aligned_cols=32  Identities=50%  Similarity=0.969  Sum_probs=29.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038725          205 NIKTLRMVHGIINAVAWGVLLPIGAVTARYLR  236 (244)
Q Consensus       205 ~~~~~~~~HG~Lm~vaWgvLlPiG~i~ARYlk  236 (244)
                      +.+.++++||+||+++|++|+|+|+++|||++
T Consensus        31 ~~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~   62 (191)
T cd08760          31 SSDTLIKAHGVLMAIAWGILMPIGALLARYFL   62 (191)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34678899999999999999999999999973

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG3568 consensus Dopamine beta-monooxygenase [Amino acid transport and metabolism]

Probab=97.25  E-value=0.002  Score=61.88  Aligned_cols=73  Identities=15%  Similarity=0.295  Sum_probs=54.9

Q ss_pred             cccCcccccCC-CCcEEEEEEecCCceEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEeecC
Q 038725           29 KTFQKCMTLPT-QQASLAWTFHAHNATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDP  107 (244)
Q Consensus        29 ~~~~~C~~l~~-~~~~L~wt~~~~~~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~l~g  107 (244)
                      ..|..-..+-. ....|-|..+-....|.|.+.-.   +.+||++|||+.|. |.++|+++.|.+  .+...++++|-+-
T Consensus        31 s~~~~h~~~~~e~~~~lsW~vdy~~q~i~F~l~~~---t~~~v~fGfSdrG~-lanaDivv~~n~--g~~~~~~DayTn~  104 (603)
T KOG3568|consen   31 STYPHHTLLDSEGKYWLSWSVDYRGQQIAFRLQVR---TAGYVGFGFSDRGA-LANADIVVGGNA--GGRPYLQDAYTNA  104 (603)
T ss_pred             CCccceeeecCCCcEEEEEeeccccceeEEEEEec---cCCEEEEecCCcCC-cccCcEEEEecc--CCchhhhhhhcCC
Confidence            44445555443 44459999887777888888763   78999999999998 999999999975  3446777877655

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=96.67  E-value=0.0025  Score=49.71  Aligned_cols=31  Identities=29%  Similarity=0.490  Sum_probs=26.6

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 038725          204 SNIKTLRMVHGIINAVAWGVLLPIGAVTARY  234 (244)
Q Consensus       204 ~~~~~~~~~HG~Lm~vaWgvLlPiG~i~ARY  234 (244)
                      ++.+....+|+++|.++|++++|+|+++.+-
T Consensus        12 ~~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~   42 (105)
T PF10348_consen   12 SPHRSALYAHIVLMTLAWVILYPIGLVLGNA   42 (105)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3456788999999999999999999998653

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>PLN02351 cytochromes b561 family protein

Probab=84.77  E-value=0.72  Score=41.13  Aligned_cols=29  Identities=10%  Similarity=0.271  Sum_probs=26.8

Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038725          209 LR-MVHGIINAVAWGVLLPIGAVTARYLRH  237 (244)
Q Consensus       209 ~~-~~HG~Lm~vaWgvLlPiG~i~ARYlk~  237 (244)
                      .. |+|-+||.+|+.+|++-++++.|++|.
T Consensus        49 iffn~HP~lMviGfi~L~geAILvYR~~~~   78 (242)
T PLN02351         49 VYAVLHPLLMVIGFILISGEAILVHRWLPG   78 (242)
T ss_pred             eeecccHHHHHHHHHHHHHHHHHHhhcccc
Confidence            45 799999999999999999999999983

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
1d7b_A	186	Cellobiose dehydrogenase; B-type cytochrome, Met/H	99.28

>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*

Probab=99.28  E-value=1.7e-10  Score=97.33  Aligned_cols=131  Identities=13%  Similarity=0.145  Sum_probs=90.3

Q ss_pred             CCCcEEEEEEecCC------ceEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEeecCccccc
Q 038725           39 TQQASLAWTFHAHN------ATLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQ  112 (244)
Q Consensus        39 ~~~~~L~wt~~~~~------~tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~l~g~~~~~  112 (244)
                      ..+..+-|.+..+.      ..+.+.++++  .+.||||+|+   |++|.|++++|+|.+ + |++++..|+.+|    |
T Consensus        22 ~~~~~f~~alP~~~~s~~~s~d~~~qi~~p--~~~gW~g~g~---Gg~M~gs~l~v~w~~-~-~~v~~S~R~a~g----~   90 (186)
T 1d7b_A           22 VHDVTYGFVFPPLATSGAQSTEFIGEVVAP--IASKWIGIAL---GGAMNNDLLLVAWAN-G-NQIVSSTRWATG----Y   90 (186)
T ss_dssp             TTTEEEEEEBCCCCSSSCCCCCEEEEEEEE--TTCCEEEEET---TSSSSSSCEEEEEEE-T-TEEEEEEEECSS----S
T ss_pred             CCCEEEEEECCCcccCCCCCccEEEEEEcc--CCCCEEEEec---CCCCCCCcEEEEEeC-C-CEEEEEEEEecC----c
Confidence            33444566654322      3477778775  5789999999   778999999999998 5 899999999999    7


Q ss_pred             cCCC-CCCCcceeeccCcccccCCceeEEEcCCEEEEEEEEeeC------C------CCCceeEEEeeccccC------C
Q 038725          113 KSPL-LSRPLDINLISSSATLYGGKMATIHNGASVQIFATLKLS------P------NKTKIHHVWNRGLYVQ------G  173 (244)
Q Consensus       113 ~~~~-~~~~l~~~v~~~~~~~~~g~~s~~~~~~~~~if~t~~l~------~------~~~~~~~Iwa~G~~~~------~  173 (244)
                      ..|. ..+..+++++..         +. ++++.++  ++++++      .      ..+. .+|||.+...+      +
T Consensus        91 ~~P~~y~~~~~~~lL~g---------s~-vn~t~~~--~~f~C~~C~~w~~~g~~~~ts~~-~~iwA~~~~~p~~~~~~~  157 (186)
T 1d7b_A           91 VQPTAYTGTATLTTLPE---------TT-INSTHWK--WVFRCQGCTEWNNGGGIDVTSQG-VLAWAFSNVAVDDPSDPQ  157 (186)
T ss_dssp             SCCEECCSSCEEEECTT---------CE-ECSSEEE--EEEEEETTTBCTTSCBCCTTSEE-EEEEEEESSCCSCTTCTT
T ss_pred             cCCCccCCCceEEEccc---------cc-EeCCEEE--EEEEeCCCcccCCCCccccCCCC-eEEEEECCCCCCCCCCCc
Confidence            6554 566677777765         32 2445433  344432      1      1223 79999875432      3


Q ss_pred             CCCccCCCCCCCCcceEEEEeecCc
Q 038725          174 YSPTIHPTTSNDLSSIATIDVMSGS  198 (244)
Q Consensus       174 ~~~~~H~~~~~n~~s~~~ldl~sG~  198 (244)
                      ..+.+|+     ..+.+.+||....
T Consensus       158 a~~~~H~-----~~G~~~~dL~~a~  177 (186)
T 1d7b_A          158 STFSEHT-----DFGFFGIDYSTAH  177 (186)
T ss_dssp             CCCCCCS-----EEEEEEEEGGGCB
T ss_pred             ccchhhh-----CcceEEEEccccc
Confidence            4678887     4778999999654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d1pl3a_	186	Cytochrome domain of cellobiose dehydrogenase {Fun	99.32

>d1pl3a_ b.1.9.1 (A:) Cytochrome domain of cellobiose dehydrogenase {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: CBD9-like
family: Cytochrome domain of cellobiose dehydrogenase
domain: Cytochrome domain of cellobiose dehydrogenase
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=99.32  E-value=1.5e-11  Score=101.70  Aligned_cols=118  Identities=13%  Similarity=0.106  Sum_probs=82.2

Q ss_pred             eEEEEEEEecCCCCceEEEEECCCCCCCCCCcEEEEEecCCCCeeEEEEEeecCccccccCCC-CCCCcceeeccCcccc
Q 038725           54 TLDLCFFGTFISPSGWVGWGINPSSPEMTGTRALVAFPDPNSGQLVLLPYILDPTVKLQKSPL-LSRPLDINLISSSATL  132 (244)
Q Consensus        54 tl~~a~sa~~~~~~GWVa~G~n~~g~~M~Gs~a~Va~~~~~~G~~~v~~y~l~g~~~~~~~~~-~~~~l~~~v~~~~~~~  132 (244)
                      .+-+.+++  |.+.||||+|+   |.+|.|++++|+|.+  +|++++++|+.+|    |.+|. .++..++.++..    
T Consensus        43 d~i~qi~a--p~~~GWvgiG~---gg~M~gs~l~V~w~~--~~~v~~S~R~atG----~~~P~~~~~~~~~~~l~~----  107 (186)
T d1pl3a_          43 EFIGEVVA--PIASKWIGIAL---GGAHNNDLLLVAWAN--GNQIVSSTRWATG----YVQPTAYTGTATLTTLPE----  107 (186)
T ss_dssp             CEEEEEEE--ETTCCEEEEET---TSSSSSSCEEEEEEE--TTEEEEEEEECST----TSCCEECCSSCEEEECTT----
T ss_pred             CEEEEEeC--CCCCcEEEEEc---CCCCCCCcEEEEEec--CCeEEEEEEEecc----eeCCcccCCCceEEEccC----
Confidence            44455555  57899999999   677999999999997  4899999999999    76543 455555555544    


Q ss_pred             cCCceeEEEcCCEEEEEEEEeeC------C-----CCCceeEEEeecccc------CCCCCccCCCCCCCCcceEEEEee
Q 038725          133 YGGKMATIHNGASVQIFATLKLS------P-----NKTKIHHVWNRGLYV------QGYSPTIHPTTSNDLSSIATIDVM  195 (244)
Q Consensus       133 ~~g~~s~~~~~~~~~if~t~~l~------~-----~~~~~~~Iwa~G~~~------~~~~~~~H~~~~~n~~s~~~ldl~  195 (244)
                           +. ++++.+++  ++++.      .     ......+|||.|+..      ++..+.+|+     ..+.+.+||.
T Consensus       108 -----s~-vn~t~~~~--~f~C~~C~~w~~~~~~~~~~~~~~iwA~~~~~p~~~~~~~~~i~~H~-----~~G~f~~dl~  174 (186)
T d1pl3a_         108 -----TT-INSTHWKW--VFRCQGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHT-----DFGFFGIDYS  174 (186)
T ss_dssp             -----CE-ECSSEEEE--EEEEETCSBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCS-----EEEEEEEEGG
T ss_pred             -----ce-EECCEEEE--EEEEeccccccCCCcccCCCceEEEEEECCCCCCCCCCCccCcceec-----CCceEEEEcc
Confidence                 22 34554443  33321      1     235568999999643      245788886     5778999998


Q ss_pred             cCcc
Q 038725          196 SGST  199 (244)
Q Consensus       196 sG~~  199 (244)
                      .+.+
T Consensus       175 ~a~~  178 (186)
T d1pl3a_         175 TAHS  178 (186)
T ss_dssp             GCBC
T ss_pred             cCcc
Confidence            7653