Citrus Sinensis ID: 038906

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MQGSSVALAPASTPILKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHEEEHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mqgssvalapastpiLKRRFCLilsssslepadlafsrgvsclqtsrfgsftprdgngvgwsARISSSLKCLNQRYNNlktragtasvpdsvdetpepsAAIQTLQLGGMFGLWYLLNIYFNIFNkqvlkvfpypttvtafQFGCGSVMIILMWTLnlytrpkltrsqfAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLrekptiwlvpslvpivGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE
Flexible Loop (DISEMBL)
mqgssvalapastpilKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFgsftprdgngvGWSARISSSLKCLNQRYNNLKtragtasvpdsvdetpEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMAsnvtnqsrnvfskkfmvrke
Low Complexity Region (SEG)
MQGSSVALAPASTPILKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE
Disordered region (IsUnstruct)
*************PILKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNN**********************AIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNV*****************
Disordered Region (DISOPRED)
*******************************************************************************************************TLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMV***
Disordered Region (DISEMBL)
*********PASTPILKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTR****************SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE
Disordered Region (DISPRO)
**G****LAPASTPILKR********************************************************************************SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMV***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQGSSVALAPASTPILKRRFCLILSSSSLEPADLAFSRGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q8H0T6	383	Phosphoenolpyruvate/phosp	yes	no	0.731	0.527	0.678	4e-76
Q8RXN3	408	Phosphoenolpyruvate/phosp	no	no	0.985	0.666	0.508	2e-69
Q84QU8	407	Phosphoenolpyruvate/phosp	yes	no	0.688	0.466	0.654	1e-67
P52178	402	Triose phosphate/phosphat	N/A	no	0.757	0.519	0.596	6e-66
Q69VR7	408	Phosphoenolpyruvate/phosp	no	no	0.630	0.426	0.701	7e-66
Q5VQL3	393	Phosphoenolpyruvate/phosp	no	no	0.652	0.458	0.611	2e-55
Q94B38	388	Glucose-6-phosphate/phosp	no	no	0.728	0.518	0.399	2e-35
Q9LF61	417	Xylulose 5-phosphate/phos	no	no	0.597	0.395	0.458	6e-35
P52177	407	Triose phosphate/phosphat	N/A	no	0.681	0.461	0.435	2e-34
P21727	402	Triose phosphate/phosphat	N/A	no	0.815	0.559	0.375	2e-34

>sp|Q8H0T6|PPT2_ARATH Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1

 Score =  284 bits (727), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 3/205 (1%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETP-EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
           N R+N  K +  +A+VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct: 46  NLRFNGFKLK--SATVPENVEGGDLESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 103

Query: 132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
           +PYP TVTAFQ GCG++MI +MW L L+ RPK + SQF VI+ LAVA TLGNLLTN+SLG
Sbjct: 104 YPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLG 163

Query: 192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
            VNVSFTHTIKAMEPFFTVL + L L E P++W+V SL+PIV GV+LAS TEASFNW GF
Sbjct: 164 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAGVSLASFTEASFNWIGF 223

Query: 252 CSAMASNVTNQSRNVFSKKFMVRKE 276
           CSAMASNVTNQSRNV SKKFMV K+
Sbjct: 224 CSAMASNVTNQSRNVLSKKFMVGKD 248

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP), 2-phosphoglycerate and 3-phosphoglycerate.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RXN3|PPT1_ARATH Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1

 Score =  262 bits (669), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/281 (50%), Positives = 182/281 (64%), Gaps = 9/281 (3%)

Query: 1   MQGSSVALAPASTPILK-RRFCLILS--SSSLEPADLAFSRGVSCLQT--SRFGSFTPRD 55
           MQ S+V     S P+LK RR  L     +++   +DL  S  V  + +   R       D
Sbjct: 1   MQSSAVFSLSPSLPLLKPRRLSLRHHPITTAASSSDLNVSPNVVSIPSLSRRSWRLASSD 60

Query: 56  GNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWY 115
                WS   S     ++   +  + R    +VP+S +E        + L+LG +F +WY
Sbjct: 61  SPLRAWSGVPSP----ISHSLDTNRFRTAATAVPESAEEGDNSGKLTKVLELGLLFAMWY 116

Query: 116 LLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPL 175
           L NIYFNI+NKQVLK    P TVT  QF  GSV+I +MW LNLY RPK++ +Q A ILPL
Sbjct: 117 LFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITIMWVLNLYKRPKISGAQLAAILPL 176

Query: 176 AVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGG 235
           AV  TLGNL TN+SLG V+VSFTHTIKAMEPFF+VL +A+FL EKPT W++ ++VPIVGG
Sbjct: 177 AVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVLLSAMFLGEKPTPWVLGAIVPIVGG 236

Query: 236 VALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
           VALAS++E SFNW GF SAMASN+TNQSRNV SKK MV+K+
Sbjct: 237 VALASISEVSFNWAGFSSAMASNLTNQSRNVLSKKVMVKKD 277

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP), 2-phosphoglycerate, 3-phosphoglycerate and dihydroxyacetone phosphate. Imports PEP to the chloroplast stroma as one substrate of the shikimate pathway, from which aromatic amino acids and a variety of secondary products derive. Required for correct leaf mesophyll cell development and expression of chlorophyll a/b binding protein 3 (CAB3).

Arabidopsis thaliana (taxid: 3702)

>sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1

 Score =  256 bits (654), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/191 (65%), Positives = 148/191 (77%), Gaps = 1/191 (0%)

Query: 86  ASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGC 145
           A+  D+  E  E S   +TLQLG +FGLWYL NIYFNI+NKQVLKVFPYP  +T  QF  
Sbjct: 87  AAAGDAKAEEEE-SGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAV 145

Query: 146 GSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAME 205
           G+V+ + MW   +  RPK++ +Q   ILPLAV  T+GNL TN+SLG V VSFTHTIKAME
Sbjct: 146 GTVVALFMWITGILRRPKISGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAME 205

Query: 206 PFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRN 265
           PFF+VL +A+FL E PT+W++ SL+PIVGGVALASLTEASFNW GF SAMASNVT QSRN
Sbjct: 206 PFFSVLLSAIFLGELPTVWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRN 265

Query: 266 VFSKKFMVRKE 276
           V SKK MV+KE
Sbjct: 266 VLSKKLMVKKE 276

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1

 Score =  251 bits (640), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 130/218 (59%), Positives = 156/218 (71%), Gaps = 9/218 (4%)

Query: 60  GWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAI-QTLQLGGMFGLWYLLN 118
            WS   S S   L+   N  KT A       +V E  E S  + + L+LG +F +WYL N
Sbjct: 62  AWSGLPSVSSPSLDT--NRFKTAA------TAVPEEGEGSGKMTKVLELGLLFAMWYLFN 113

Query: 119 IYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA 178
           IYFNI+NKQVLK    P TVT  QF  GSV+I  MW LNLY RPK++ +Q A ILPLAV 
Sbjct: 114 IYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVV 173

Query: 179 DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL 238
            TLGNL TN+SLG V+VSFTHTIKAMEPFF+V+ +A+FL E PT W++ S++PIVGGVAL
Sbjct: 174 HTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIVGGVAL 233

Query: 239 ASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
           AS+TE SFNW GF SAMASN+TNQSRNV SKK MV+K+
Sbjct: 234 ASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKD 271

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|Q69VR7|PPT1_ORYSJ Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1

 Score =  250 bits (639), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/174 (70%), Positives = 141/174 (81%)

Query: 103 QTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRP 162
           +TLQLG +FGLWYL NIYFNI+NKQVLKVFPYP  +T  QF  G+V+ + MW   +  RP
Sbjct: 104 KTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRP 163

Query: 163 KLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPT 222
           K++ +Q A ILPLA+  T+GNL TN+SLG V VSFTHTIKAMEPFF+VL +ALFL E PT
Sbjct: 164 KISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPT 223

Query: 223 IWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
            ++V SLVPIVGGVALASLTEASFNW GF SAMASNVT QSRNV SKK MV+KE
Sbjct: 224 PFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKE 277

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5VQL3|PPT3_ORYSJ Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1

 Score =  215 bits (548), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/180 (61%), Positives = 130/180 (72%)

Query: 97  EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTL 156
           E  A  +T QLG M   WYLLNIYFNI+NKQVL+  P+P T+TAFQ   GS +I LMW L
Sbjct: 85  ERGALAETAQLGAMIVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAFGSFVIFLMWAL 144

Query: 157 NLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALF 216
            L+  P+++ SQ A I PLA    LG + TN+SL  V VSFTHTIKA EPFFTVL +A F
Sbjct: 145 KLHPAPRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFF 204

Query: 217 LREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
           L E P++ ++ SLVPIVGGVALASLTE SFNW GF SAMASN+  QSRNV SKK +  +E
Sbjct: 205 LGETPSLLVLGSLVPIVGGVALASLTELSFNWIGFWSAMASNLLYQSRNVLSKKLLGGEE 264

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 2/203 (0%)

Query: 74  QRYNNLKTRAGTASVPDSVD-ETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVF 132
           +R   ++      S P  ++ E P+  +A Q L++G  F  W+ LN+ FNI+NK+VL  F
Sbjct: 64  KREVKVEAYEADRSRPLDINIELPDEQSA-QKLKIGIYFATWWALNVVFNIYNKKVLNAF 122

Query: 133 PYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGT 192
           PYP   +     CGS+M+++ W   +   PK     +  + P+AVA T+G++   +S+  
Sbjct: 123 PYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSK 182

Query: 193 VNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFC 252
           V VSFTH IK+ EP F+VL +  F+ E   + +  SL+PI+GG ALA++TE +FN TGF 
Sbjct: 183 VAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFM 242

Query: 253 SAMASNVTNQSRNVFSKKFMVRK 275
            AM SN+    RN+FSKK M  K
Sbjct: 243 GAMISNLAFVFRNIFSKKGMKGK 265

Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for dynamic acclimation of photosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1

 Score =  147 bits (372), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 3/168 (1%)

Query: 104 TLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPK 163
           TLQLG +FGLWY  NI FNIFNK+ L VFPYP  + +FQ   GS+ ++++W+  LY  PK
Sbjct: 109 TLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPK 168

Query: 164 LTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKP-T 222
           +++     +L  A+  T+G++   +S   V VSFTH IK+ EP F+V+F++L     P  
Sbjct: 169 ISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSLLGDSYPLA 228

Query: 223 IWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKK 270
           +WL  S++PIV G +LA++TE SFN  G   AM SNV    RN++SK+
Sbjct: 229 VWL--SILPIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLRNIYSKR 274

Sugar phosphate/phosphate translocator that transports inorganic phosphate, triose phosphate, 3-phosphoglycerate, xylulose 5-phosphate (Xul-5-P) and to a lesser extent ribulose 5-phosphate. Does not transport ribose 5-phosphate or hexose phosphates. Provides cytosolic Xul-5-P to the chloroplast, where it is used as an intermediate in the plastidic pentose phosphate pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 115/195 (58%), Gaps = 7/195 (3%)

Query: 82  RAGTASVPDSVDETPEP-SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTA 140
           RA +A   DS  ET          L  G +  +WY LN+ FNI NK++   FPYP  V+ 
Sbjct: 79  RAASAEGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSV 138

Query: 141 FQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHT 200
                G V  ++ W++ L  R  +      V++P+AV   +G++ +N+S   V VSFTHT
Sbjct: 139 IHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHT 198

Query: 201 IKAMEPFFTVLFAALFLREKP---TIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMAS 257
           IKA+EPFF    A+ FL  +P   T+WL  SL P+V GVA+ASLTE SFNW GF SAM S
Sbjct: 199 IKALEPFFNAS-ASQFLLGQPIPITLWL--SLAPVVLGVAMASLTELSFNWLGFISAMIS 255

Query: 258 NVTNQSRNVFSKKFM 272
           N++   R++FSKK M
Sbjct: 256 NISFTYRSIFSKKAM 270

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 127/237 (53%), Gaps = 12/237 (5%)

Query: 48  FGSFTPRDGNGVGWSARISSSL--KCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQ-- 103
           FGS +  DG  + W  ++   L    L +  + L+    TA   DS  E  E  A +   
Sbjct: 37  FGSVS--DGGNLVWGRQLRPELCSPVLKKGASLLRPCPATAGGNDSAGE--EKVAPVGFF 92

Query: 104 ----TLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLY 159
                L  G  F  WY LN+ FNI NK++   FPYP  V+      G V  ++ WT+ L 
Sbjct: 93  SRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLP 152

Query: 160 TRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLRE 219
            R  +  +   +++P+AV   LG++ +N+S   V VSFTHT+KA+EPFF    +   L +
Sbjct: 153 KRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQ 212

Query: 220 KPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
              I L  SL P+V GV++ASLTE SFNW GF SAM SN++   R+++SKK M   +
Sbjct: 213 SIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMD 269

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
224055543	330	predicted protein [Populus trichocarpa]	0.713	0.596	0.748	2e-80
255560860	406	Triose phosphate/phosphate translocator,	0.724	0.492	0.727	6e-79
449450201	396	PREDICTED: phosphoenolpyruvate/phosphate	0.699	0.487	0.715	1e-77
225452410	401	PREDICTED: phosphoenolpyruvate/phosphate	0.731	0.503	0.705	3e-76
296087639	606	unnamed protein product [Vitis vinifera]	0.731	0.333	0.705	3e-76
225457009	410	PREDICTED: phosphoenolpyruvate/phosphate	0.811	0.546	0.606	7e-76
21537050	382	putative phosphate/phosphoenolpyruvate t	0.731	0.528	0.678	2e-74
18395855	383	phosphoenolpyruvate (pep)/phosphate tran	0.731	0.527	0.678	2e-74
6016714	380	putative phosphate/phosphoenolpyruvate t	0.731	0.531	0.678	3e-74
297828584	380	hypothetical protein ARALYDRAFT_477360 [	0.731	0.531	0.673	2e-73

>gi|224055543|ref|XP_002298531.1| predicted protein [Populus trichocarpa] gi|222845789|gb|EEE83336.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/199 (74%), Positives = 165/199 (82%), Gaps = 2/199 (1%)

Query: 78  NLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTT 137
           ++K RA  ASVPDS  E  + S A +T+QLG MFG+WYLLNIYFNIFNKQVLKV+P+P T
Sbjct: 2   SIKVRA--ASVPDSTGEFEKSSDAARTMQLGAMFGIWYLLNIYFNIFNKQVLKVYPFPAT 59

Query: 138 VTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSF 197
           +TAFQ GCG+VMII+MW LNL  RPKLTR Q   ILPLAVA T GNLLTN+SLG V VSF
Sbjct: 60  ITAFQVGCGTVMIIIMWALNLCNRPKLTRPQILAILPLAVAHTFGNLLTNVSLGKVAVSF 119

Query: 198 THTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMAS 257
           THTIKA+EPFFTVLFAALFL E P  W++ SLVP+VGGV LASLTE SFNW GFCSAMAS
Sbjct: 120 THTIKALEPFFTVLFAALFLGETPAFWVLSSLVPLVGGVGLASLTEVSFNWIGFCSAMAS 179

Query: 258 NVTNQSRNVFSKKFMVRKE 276
           NVTNQSRNVFSKK MV KE
Sbjct: 180 NVTNQSRNVFSKKLMVNKE 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560860|ref|XP_002521443.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis] gi|223539342|gb|EEF40933.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis]

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 147/202 (72%), Positives = 169/202 (83%), Gaps = 2/202 (0%)

Query: 76  YNNLKT-RAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPY 134
           YNN ++ +   ASVP+S  +  E S   + +QL  MFG+WYLLNIY+NIFNKQVLKV+P+
Sbjct: 70  YNNNRSFKVYAASVPESTSQN-ETSDLARIIQLAAMFGIWYLLNIYYNIFNKQVLKVYPF 128

Query: 135 PTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVN 194
           P TVTAFQ GCG++MII+ W LNLY +PKLTRSQF  ILPLAVA T+GNLLTNISLG V 
Sbjct: 129 PATVTAFQCGCGTLMIIITWALNLYHKPKLTRSQFTAILPLAVAHTMGNLLTNISLGKVA 188

Query: 195 VSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSA 254
           VSFTHTIKAMEPFFTVLFA+LFL E+P+ W++ SLVPIVGGVALAS TE+SFN TGFCSA
Sbjct: 189 VSFTHTIKAMEPFFTVLFASLFLGERPSFWVLSSLVPIVGGVALASFTESSFNLTGFCSA 248

Query: 255 MASNVTNQSRNVFSKKFMVRKE 276
           MASNVTNQSRNV SKKFMV KE
Sbjct: 249 MASNVTNQSRNVLSKKFMVSKE 270

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450201|ref|XP_004142852.1| PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Cucumis sativus]

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/193 (71%), Positives = 162/193 (83%)

Query: 84  GTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQF 143
             +SVP+S  E  E    +Q L+LG MFG+WYLLNIY+NIFNKQVLK FP+PTTVTAFQF
Sbjct: 71  AASSVPESAGEGVESVDLVQNLRLGAMFGIWYLLNIYYNIFNKQVLKAFPFPTTVTAFQF 130

Query: 144 GCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKA 203
           GCG++++ LMW LN + RPK++ SQFA ILPLAVA T+GN+LTN+SLG V VSFTHTIKA
Sbjct: 131 GCGTIIVNLMWALNFHHRPKISSSQFATILPLAVAHTMGNILTNVSLGRVAVSFTHTIKA 190

Query: 204 MEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQS 263
           MEPFFTVL +ALFL E+P+ W+V SLVP+VGGVALAS TEASFNW GF SAMASN+TNQS
Sbjct: 191 MEPFFTVLLSALFLAERPSFWVVFSLVPVVGGVALASFTEASFNWIGFSSAMASNLTNQS 250

Query: 264 RNVFSKKFMVRKE 276
           RN+FSKK MV KE
Sbjct: 251 RNIFSKKLMVHKE 263

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452410|ref|XP_002276496.1| PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Vitis vinifera]

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/204 (70%), Positives = 169/204 (82%), Gaps = 2/204 (0%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVF 132
           N R++  K RA  +SVP++ +ET + S     LQLG MF +WYLLNIYFNIFNKQ+LKV+
Sbjct: 66  NPRFSGFKFRA--SSVPENAEETEKSSNLGGILQLGSMFAIWYLLNIYFNIFNKQILKVY 123

Query: 133 PYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGT 192
           P+P TVTAFQFGCG+V++ILMW  NLY RPK+++SQF+ IL LAV  T+GNLLTN+SL  
Sbjct: 124 PFPATVTAFQFGCGTVLVILMWAFNLYKRPKISKSQFSGILILAVTHTMGNLLTNLSLRK 183

Query: 193 VNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFC 252
           V VSFTHTIKAMEPFFTV+ A LFL EKPT+ +V SLVPIVGGVALAS TE+SFNWTGF 
Sbjct: 184 VAVSFTHTIKAMEPFFTVVLATLFLGEKPTLPIVSSLVPIVGGVALASFTESSFNWTGFW 243

Query: 253 SAMASNVTNQSRNVFSKKFMVRKE 276
           SAMASN+TNQSRNVFSKKFMV KE
Sbjct: 244 SAMASNLTNQSRNVFSKKFMVNKE 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087639|emb|CBI34895.3| unnamed protein product [Vitis vinifera]

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/204 (70%), Positives = 169/204 (82%), Gaps = 2/204 (0%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVF 132
           N R++  K RA  +SVP++ +ET + S     LQLG MF +WYLLNIYFNIFNKQ+LKV+
Sbjct: 271 NPRFSGFKFRA--SSVPENAEETEKSSNLGGILQLGSMFAIWYLLNIYFNIFNKQILKVY 328

Query: 133 PYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGT 192
           P+P TVTAFQFGCG+V++ILMW  NLY RPK+++SQF+ IL LAV  T+GNLLTN+SL  
Sbjct: 329 PFPATVTAFQFGCGTVLVILMWAFNLYKRPKISKSQFSGILILAVTHTMGNLLTNLSLRK 388

Query: 193 VNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFC 252
           V VSFTHTIKAMEPFFTV+ A LFL EKPT+ +V SLVPIVGGVALAS TE+SFNWTGF 
Sbjct: 389 VAVSFTHTIKAMEPFFTVVLATLFLGEKPTLPIVSSLVPIVGGVALASFTESSFNWTGFW 448

Query: 253 SAMASNVTNQSRNVFSKKFMVRKE 276
           SAMASN+TNQSRNVFSKKFMV KE
Sbjct: 449 SAMASNLTNQSRNVFSKKFMVNKE 472

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457009|ref|XP_002282424.1| PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Vitis vinifera] gi|297733768|emb|CBI15015.3| unnamed protein product [Vitis vinifera]

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 145/239 (60%), Positives = 179/239 (74%), Gaps = 15/239 (6%)

Query: 38  RGVSCLQTSRFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPE 97
           R  + L +SRFG+F              S+     ++R  +L  RA  +SVP+S  E+ +
Sbjct: 58  RTPAALSSSRFGAFG-------------SAPYLVEDRRRGDLTVRA--SSVPESAGESEK 102

Query: 98  PSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLN 157
               +QTLQLG +FGLWYL NIYFNI+NKQVLKV+P+P TVT  QF  G+V++ILMW LN
Sbjct: 103 SGNLVQTLQLGLLFGLWYLFNIYFNIYNKQVLKVYPFPVTVTVVQFAVGTVLVILMWGLN 162

Query: 158 LYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFL 217
           LY RPK++ SQ   ILPLAV  TLGNL TN+SLG V+VSFTHTIKAMEPFF+V+ +A+FL
Sbjct: 163 LYKRPKISSSQLVAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFL 222

Query: 218 REKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
            E PTIW++ SL+PIVGGVALAS TEASFNW+GF SAMASN+TNQSRNV SKKFM++KE
Sbjct: 223 GEFPTIWVLSSLLPIVGGVALASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIKKE 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537050|gb|AAM61391.1| putative phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 3/205 (1%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETP-EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
           N R+N  K +  +A+VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct: 45  NLRFNGFKLK--SATVPENVEGGDLESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 102

Query: 132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
           +PYP TVTAFQ GCG++MI +MW L L+ RPK + SQF VI+ LAVA TLGNLLTN+SLG
Sbjct: 103 YPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLG 162

Query: 192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
            VNVSFTHTIKAMEPFFTVL + L L E P++W+V SL+PIV GV+LAS TEASFNW GF
Sbjct: 163 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAGVSLASFTEASFNWIGF 222

Query: 252 CSAMASNVTNQSRNVFSKKFMVRKE 276
           CSAMASNVTNQSRNV SKKFMV K+
Sbjct: 223 CSAMASNVTNQSRNVLSKKFMVGKD 247

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18395855|ref|NP_566142.1| phosphoenolpyruvate (pep)/phosphate translocator 2 [Arabidopsis thaliana] gi|75151823|sp|Q8H0T6.1|PPT2_ARATH RecName: Full=Phosphoenolpyruvate/phosphate translocator 2, chloroplastic; Short=AtPPT2; Flags: Precursor gi|25083416|gb|AAN72072.1| putative phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana] gi|30725606|gb|AAP37825.1| At3g01550 [Arabidopsis thaliana] gi|332640166|gb|AEE73687.1| phosphoenolpyruvate (pep)/phosphate translocator 2 [Arabidopsis thaliana]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 3/205 (1%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETP-EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
           N R+N  K +  +A+VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct: 46  NLRFNGFKLK--SATVPENVEGGDLESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 103

Query: 132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
           +PYP TVTAFQ GCG++MI +MW L L+ RPK + SQF VI+ LAVA TLGNLLTN+SLG
Sbjct: 104 YPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLG 163

Query: 192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
            VNVSFTHTIKAMEPFFTVL + L L E P++W+V SL+PIV GV+LAS TEASFNW GF
Sbjct: 164 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAGVSLASFTEASFNWIGF 223

Query: 252 CSAMASNVTNQSRNVFSKKFMVRKE 276
           CSAMASNVTNQSRNV SKKFMV K+
Sbjct: 224 CSAMASNVTNQSRNVLSKKFMVGKD 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6016714|gb|AAF01540.1|AC009325_10 putative phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana]

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 3/205 (1%)

Query: 73  NQRYNNLKTRAGTASVPDSVDETP-EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
           N R+N  K +  +A+VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct: 46  NLRFNGFKLK--SATVPENVEGGDLESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 103

Query: 132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
           +PYP TVTAFQ GCG++MI +MW L L+ RPK + SQF VI+ LAVA TLGNLLTN+SLG
Sbjct: 104 YPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLG 163

Query: 192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
            VNVSFTHTIKAMEPFFTVL + L L E P++W+V SL+PIV GV+LAS TEASFNW GF
Sbjct: 164 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAGVSLASFTEASFNWIGF 223

Query: 252 CSAMASNVTNQSRNVFSKKFMVRKE 276
           CSAMASNVTNQSRNV SKKFMV K+
Sbjct: 224 CSAMASNVTNQSRNVLSKKFMVGKD 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828584|ref|XP_002882174.1| hypothetical protein ARALYDRAFT_477360 [Arabidopsis lyrata subsp. lyrata] gi|297328014|gb|EFH58433.1| hypothetical protein ARALYDRAFT_477360 [Arabidopsis lyrata subsp. lyrata]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/205 (67%), Positives = 164/205 (80%), Gaps = 3/205 (1%)

Query: 73  NQRYNNLKTRAGTASVPDSVDE-TPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
           N R+N  K +  +A+VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct: 43  NLRFNGFKLK--SATVPENVEGGDSESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 100

Query: 132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
           +PYP TVTAFQ GCG++MI +MW L L+ RPK   SQF  I+ LA A TLGNLLTN+SLG
Sbjct: 101 YPYPATVTAFQLGCGTLMIAVMWLLKLHPRPKFAPSQFTAIVQLAAAHTLGNLLTNVSLG 160

Query: 192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
            VNVSFTHTIKAMEPFFTVL + L L E P++W V SL+PIV GV+LAS TEASFNW GF
Sbjct: 161 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWTVCSLLPIVAGVSLASFTEASFNWIGF 220

Query: 252 CSAMASNVTNQSRNVFSKKFMVRKE 276
           CSAMASNVTNQSRNV SKKFMV KE
Sbjct: 221 CSAMASNVTNQSRNVLSKKFMVGKE 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2084203	383	PPT2 "phosphoenolpyruvate (pep	0.731	0.527	0.678	3.7e-71
TAIR|locus:2145944	408	CUE1 "CAB UNDEREXPRESSED 1" [A	0.981	0.664	0.531	3.2e-65
UNIPROTKB|Q84QU8	407	PPT2 "Phosphoenolpyruvate/phos	0.688	0.466	0.654	1.1e-62
UNIPROTKB|Q69VR7	408	PPT1 "Phosphoenolpyruvate/phos	0.833	0.563	0.567	7.9e-62
UNIPROTKB|Q5VQL3	393	PPT3 "Phosphoenolpyruvate/phos	0.713	0.501	0.575	6.3e-53
TAIR|locus:2036778	388	GPT2 "glucose-6-phosphate/phos	0.898	0.639	0.363	3.5e-36
TAIR|locus:2151381	417	AT5G17630 "AT5G17630" [Arabido	0.659	0.436	0.430	1.5e-35
TAIR|locus:2161423	415	APE2 "ACCLIMATION OF PHOTOSYNT	0.601	0.4	0.452	5.1e-35
TAIR|locus:2160175	388	GPT1 "glucose 6-phosphate/phos	0.673	0.479	0.405	4.6e-34
ZFIN|ZDB-GENE-040426-2033	375	slc35e1 "solute carrier family	0.568	0.418	0.364	1e-22

TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 139/205 (67%), Positives = 167/205 (81%)

Query:    73 NQRYNNLKTRAGTASVPDSVDETP-EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
             N R+N  K ++ T  VP++V+    E  + ++ L+LGGMFG+WYLLNIY+NIFNKQVL+V
Sbjct:    46 NLRFNGFKLKSAT--VPENVEGGDLESGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRV 103

Query:   132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
             +PYP TVTAFQ GCG++MI +MW L L+ RPK + SQF VI+ LAVA TLGNLLTN+SLG
Sbjct:   104 YPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLG 163

Query:   192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
              VNVSFTHTIKAMEPFFTVL + L L E P++W+V SL+PIV GV+LAS TEASFNW GF
Sbjct:   164 RVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAGVSLASFTEASFNWIGF 223

Query:   252 CSAMASNVTNQSRNVFSKKFMVRKE 276
             CSAMASNVTNQSRNV SKKFMV K+
Sbjct:   224 CSAMASNVTNQSRNVLSKKFMVGKD 248

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 150/282 (53%), Positives = 188/282 (66%)

Query:     1 MQGSSV-ALAPASTPILK-RRFCLILS--SSSLEPADLAFSRGVSCLQT--SRFGSFTPR 54
             MQ S+V +L+P S P+LK RR  L     +++   +DL  S  V  + +   R       
Sbjct:     1 MQSSAVFSLSP-SLPLLKPRRLSLRHHPITTAASSSDLNVSPNVVSIPSLSRRSWRLASS 59

Query:    55 DGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLW 114
             D     WS   S     L+   N  +T A TA VP+S +E        + L+LG +F +W
Sbjct:    60 DSPLRAWSGVPSPISHSLDT--NRFRT-AATA-VPESAEEGDNSGKLTKVLELGLLFAMW 115

Query:   115 YLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILP 174
             YL NIYFNI+NKQVLK    P TVT  QF  GSV+I +MW LNLY RPK++ +Q A ILP
Sbjct:   116 YLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITIMWVLNLYKRPKISGAQLAAILP 175

Query:   175 LAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVG 234
             LAV  TLGNL TN+SLG V+VSFTHTIKAMEPFF+VL +A+FL EKPT W++ ++VPIVG
Sbjct:   176 LAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVLLSAMFLGEKPTPWVLGAIVPIVG 235

Query:   235 GVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
             GVALAS++E SFNW GF SAMASN+TNQSRNV SKK MV+K+
Sbjct:   236 GVALASISEVSFNWAGFSSAMASNLTNQSRNVLSKKVMVKKD 277

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009528 "plastid inner membrane" evidence=TAS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 125/191 (65%), Positives = 148/191 (77%)

Query:    86 ASVPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGC 145
             A+  D+  E  E   A +TLQLG +FGLWYL NIYFNI+NKQVLKVFPYP  +T  QF  
Sbjct:    87 AAAGDAKAEEEESGLA-KTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAV 145

Query:   146 GSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAME 205
             G+V+ + MW   +  RPK++ +Q   ILPLAV  T+GNL TN+SLG V VSFTHTIKAME
Sbjct:   146 GTVVALFMWITGILRRPKISGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAME 205

Query:   206 PFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRN 265
             PFF+VL +A+FL E PT+W++ SL+PIVGGVALASLTEASFNW GF SAMASNVT QSRN
Sbjct:   206 PFFSVLLSAIFLGELPTVWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRN 265

Query:   266 VFSKKFMVRKE 276
             V SKK MV+KE
Sbjct:   266 VLSKKLMVKKE 276

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 131/231 (56%), Positives = 161/231 (69%)

Query:    47 RFGSFTPRDGNGVGWSARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAI-QTL 105
             R  +  PR G        + +S +  ++R    +  A  A+   + +   E    + +TL
Sbjct:    47 RLSAVAPRAGISARRIGLVPASPEQEDERRRGARDVAVAATAAAAGEAGAEEGGGLAKTL 106

Query:   106 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLT 165
             QLG +FGLWYL NIYFNI+NKQVLKVFPYP  +T  QF  G+V+ + MW   +  RPK++
Sbjct:   107 QLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKIS 166

Query:   166 RSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWL 225
              +Q A ILPLA+  T+GNL TN+SLG V VSFTHTIKAMEPFF+VL +ALFL E PT ++
Sbjct:   167 GAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFV 226

Query:   226 VPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
             V SLVPIVGGVALASLTEASFNW GF SAMASNVT QSRNV SKK MV+KE
Sbjct:   227 VLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKE 277

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 115/200 (57%), Positives = 137/200 (68%)

Query:    80 KTRAGTASVP-DSVDETP--EPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPT 136
             +  A  A +P D  D     E  A  +T QLG M   WYLLNIYFNI+NKQVL+  P+P 
Sbjct:    65 RVAAAEAPLPADDADAAAGRERGALAETAQLGAMIVAWYLLNIYFNIYNKQVLQPLPFPY 124

Query:   137 TVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVS 196
             T+TAFQ   GS +I LMW L L+  P+++ SQ A I PLA    LG + TN+SL  V VS
Sbjct:   125 TITAFQLAFGSFVIFLMWALKLHPAPRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVS 184

Query:   197 FTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMA 256
             FTHTIKA EPFFTVL +A FL E P++ ++ SLVPIVGGVALASLTE SFNW GF SAMA
Sbjct:   185 FTHTIKASEPFFTVLLSAFFLGETPSLLVLGSLVPIVGGVALASLTELSFNWIGFWSAMA 244

Query:   257 SNVTNQSRNVFSKKFMVRKE 276
             SN+  QSRNV SKK +  +E
Sbjct:   245 SNLLYQSRNVLSKKLLGGEE 264

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 96/264 (36%), Positives = 149/264 (56%)

Query:    27 SSLEPADLAFSRGVSCLQTSRFGS---FTP----RDGNGVGWSARISSSLKCLN-QRYNN 78
             SS++P+  +FS  +S        +   F+P    ++ +   ++A + S  K L+    +N
Sbjct:     3 SSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASN 62

Query:    79 ----LKTRAGTA--SVPDSVD-ETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV 131
                 +K  A  A  S P  ++ E P+  +A Q L++G  F  W+ LN+ FNI+NK+VL  
Sbjct:    63 FKREVKVEAYEADRSRPLDINIELPDEQSA-QKLKIGIYFATWWALNVVFNIYNKKVLNA 121

Query:   132 FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLG 191
             FPYP   +     CGS+M+++ W   +   PK     +  + P+AVA T+G++   +S+ 
Sbjct:   122 FPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMS 181

Query:   192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGF 251
              V VSFTH IK+ EP F+VL +  F+ E   + +  SL+PI+GG ALA++TE +FN TGF
Sbjct:   182 KVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGF 241

Query:   252 CSAMASNVTNQSRNVFSKKFMVRK 275
               AM SN+    RN+FSKK M  K
Sbjct:   242 MGAMISNLAFVFRNIFSKKGMKGK 265

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007276 "gamete generation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0010109 "regulation of photosynthesis" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 81/188 (43%), Positives = 117/188 (62%)

Query:    87 SVPDS---VDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQF 143
             S PD    + E  +     +TLQLG +FGLWY  NI FNIFNK+ L VFPYP  + +FQ 
Sbjct:    89 SNPDEKSDLGEAEKKEKKAKTLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQL 148

Query:   144 GCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKA 203
               GS+ ++++W+  LY  PK+++     +L  A+  T+G++   +S   V VSFTH IK+
Sbjct:   149 FAGSIWMLVLWSFKLYPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKS 208

Query:   204 MEPFFTVLFAALFLREKP-TIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQ 262
              EP F+V+F++L     P  +WL  S++PIV G +LA++TE SFN  G   AM SNV   
Sbjct:   209 AEPVFSVIFSSLLGDSYPLAVWL--SILPIVMGCSLAAVTEVSFNLGGLSGAMISNVGFV 266

Query:   263 SRNVFSKK 270
              RN++SK+
Sbjct:   267 LRNIYSKR 274

GO:0005355 "glucose transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 77/170 (45%), Positives = 106/170 (62%)

Query:   105 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKL 164
             L  G  F +WY LN+ FNI NK++   FPYP  V+      G V  ++ W++ L  R  +
Sbjct:   106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPI 165

Query:   165 TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREK-P-T 222
               +   V++P+AV   LG++ +N+S   V VSFTHTIKA+EPFF    +   + +  P T
Sbjct:   166 DSNLLKVLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPIT 225

Query:   223 IWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFM 272
             +WL  SL P+V GVA+ASLTE SFNW GF SAM SN++   R++FSKK M
Sbjct:   226 LWL--SLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 273

GO:0005215 "transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015717 "triose phosphate transport" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 77/190 (40%), Positives = 113/190 (59%)

Query:    88 VPDSVDETPEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGS 147
             + D        S A + L++G  F  W+ LN+ FNI+NK+VL  +PYP   +      GS
Sbjct:    78 IGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGS 137

Query:   148 VMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPF 207
             +M+++ W + +   PK     +  + P+AVA T+G++   +S+  V VSFTH IK+ EP 
Sbjct:   138 LMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA 197

Query:   208 FTVLFAALFLREK-PT-IWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRN 265
             F+VL +   L E  PT ++L  SL+PI+GG AL++LTE +FN  GF  AM SN+    RN
Sbjct:   198 FSVLVSRFILGETFPTSVYL--SLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRN 255

Query:   266 VFSKKFMVRK 275
             +FSKK M  K
Sbjct:   256 IFSKKGMKGK 265

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007033 "vacuole organization" evidence=IMP

GO:0009553 "embryo sac development" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0034389 "lipid particle organization" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0009790 "embryo development" evidence=IMP

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

ZFIN|ZDB-GENE-040426-2033 slc35e1 "solute carrier family 35, member E1" [Danio rerio (taxid:7955)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 59/162 (36%), Positives = 93/162 (57%)

Query:   114 WYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKL---TRSQFA 170
             WY ++   N+ NK +L  FPYP TV+ F     S+++ L   L  +  P+     R    
Sbjct:    23 WYTVSSGGNVINKIILNSFPYPVTVSLFHIV--SIIVFLPPLLRAWGVPRTELPARYYRW 80

Query:   171 VILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLV 230
              ILPLA      ++  + S+  V VS+ HT+KA  P + VL + + ++EK T  +  SL+
Sbjct:    81 YILPLAFGKYFASVSAHFSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQTTKVYVSLI 140

Query:   231 PIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFM 272
             PI+GGV LA++TE SF+ +G  SA+A+ +    +N+FSKK +
Sbjct:   141 PIIGGVLLATVTELSFDMSGLISALAATLCFSLQNIFSKKVL 182

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	2e-66
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	1e-40
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-12
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-05
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	5e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	7e-04
PRK11689	295	PRK11689, PRK11689, aromatic amino acid exporter;	7e-04

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score =  208 bits (531), Expect = 2e-66
 Identities = 93/171 (54%), Positives = 121/171 (70%)

Query: 105 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKL 164
           LQ G +FGLWY LN+YFNI+NK++L VFPYP   T      GS+  +L W+  L  R K+
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 165 TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIW 224
           + +   ++LP+A+  T+G++ +N+SL  V VSFTHTIKAMEPFF+V+ +A FL ++    
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 225 LVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRK 275
           L  SL+PIVGGVALAS TE SFNW GF SAM SN+T  SRN+FSKK M  K
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK 171

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score =  143 bits (362), Expect = 1e-40
 Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 2/180 (1%)

Query: 99  SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNL 158
           S      +L  +F  WY LN+ + + NK  L + P P T+++ Q   G +  +L W    
Sbjct: 42  SFPNFKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGF 101

Query: 159 YTRPKL--TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALF 216
              P++   +      LP  +     +    IS+G   VSFTH +KA EP FT L + LF
Sbjct: 102 RKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF 161

Query: 217 LREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
           L++   ++   SL+PIVGGVALAS+ E  F W  F  AM SN+ +  R++F+KK M  K 
Sbjct: 162 LKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKS 221

Length = 350

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 61.9 bits (151), Expect = 3e-12
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADT-L 181
           +F+K++L+    P T TA++F    +++IL+  L       L+      +L L +  T L
Sbjct: 8   VFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLGLFGTAL 66

Query: 182 GNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL 241
           G LL   +L  V+ S    I ++ P FT++ + L L EK T+  +  +V I+ GV L  L
Sbjct: 67  GYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 4/164 (2%)

Query: 113 LWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVI 172
           LW LL     I  K  ++         A +F   +++++ +  L         R    ++
Sbjct: 14  LWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLL 73

Query: 173 LPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAA-LFLREKPTIWLVPSLVP 231
           L   +   L  LL  ++L   + S    I  + P FT L A  L L E+ ++  +  ++ 
Sbjct: 74  LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILL 133

Query: 232 IVGGVALASL---TEASFNWTGFCSAMASNVTNQSRNVFSKKFM 272
            + GV L  L        +  G   A+A+ +         K+  
Sbjct: 134 ALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS 177

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 184 LLTNISLGTVNVSFTHTIK-----------AMEPFFTVLFAALFLREKPTI-WLVPSLVP 231
           LL  + +G   V +   +K            + P +  L + L  +E+P    L+ +++ 
Sbjct: 51  LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLG 110

Query: 232 IVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 276
           + G V L S    S N  G    + S ++     V  K+ + ++ 
Sbjct: 111 LAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG 155

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 2/125 (1%)

Query: 121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADT 180
           +    K++ ++ P   T+        +++++L++ L+ +  P L+R+   ++     +  
Sbjct: 169 YTALVKRLSRLGP--VTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTG 226

Query: 181 LGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS 240
           L  LL   +L  +  S    +  +EP F  L   L L E  +   +     +V GV LAS
Sbjct: 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286

Query: 241 LTEAS 245
           L    
Sbjct: 287 LRARR 291

Length = 292

>gnl|CDD|183277 PRK11689, PRK11689, aromatic amino acid exporter; Provisional

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 206 PFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASN 258
           P  T+LFA LF  +K    L+P L+  + GVA     +   +     + +ASN
Sbjct: 102 PSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASN 154

Length = 295

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.97
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.95
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.88
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.8
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.68
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.58
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.56
PRK11272	292	putative DMT superfamily transporter inner membran	99.55
PRK11689	295	aromatic amino acid exporter; Provisional	99.53
PLN00411	358	nodulin MtN21 family protein; Provisional	99.51
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.48
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.47
PRK15430	296	putative chloramphenical resistance permease RarD;	99.45
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.42
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.34
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.3
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.24
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.19
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.14
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.09
KOG1580	337	consensus UDP-galactose transporter related protei	99.01
KOG1581	327	consensus UDP-galactose transporter related protei	98.98
COG2510	140	Predicted membrane protein [Function unknown]	98.95
KOG1582	367	consensus UDP-galactose transporter related protei	98.95
KOG2765	416	consensus Predicted membrane protein [Function unk	98.87
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.72
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.68
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.62
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.58
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.51
PLN00411	358	nodulin MtN21 family protein; Provisional	98.49
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.48
PRK11689	295	aromatic amino acid exporter; Provisional	98.4
PRK11272	292	putative DMT superfamily transporter inner membran	98.39
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.24
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.23
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.18
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.17
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.14
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.11
COG2962	293	RarD Predicted permeases [General function predict	98.07
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.01
PRK15430	296	putative chloramphenical resistance permease RarD;	97.94
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.85
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.77
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.6
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.48
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.18
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.18
PRK11431	105	multidrug efflux system protein; Provisional	97.04
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.99
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.98
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.86
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.71
KOG2766	336	consensus Predicted membrane protein [Function unk	96.67
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.63
COG2076	106	EmrE Membrane transporters of cations and cationic	96.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.33
COG2962	293	RarD Predicted permeases [General function predict	96.25
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.88
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.82
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.74
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.61
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	93.81
KOG1581	327	consensus UDP-galactose transporter related protei	93.54
PRK13499	345	rhamnose-proton symporter; Provisional	93.31
KOG4510	346	consensus Permease of the drug/metabolite transpor	92.92
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	92.7
PRK13499	345	rhamnose-proton symporter; Provisional	91.53
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.32
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.14
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	87.23
KOG1580	337	consensus UDP-galactose transporter related protei	84.42
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	82.79
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	80.34

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.97  E-value=1.6e-29  Score=238.91  Aligned_cols=173  Identities=36%  Similarity=0.616  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC--hHHHHHHHHHHHHHH
Q 038906          103 QTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLT--RSQFAVILPLAVADT  180 (276)
Q Consensus       103 ~~l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s--~~~~~~~lplgl~~~  180 (276)
                      ..+++..+|++||.+|+.++++||++++.+|||++++.+|++++++++.+.|..+.+++++..  +++++.++|+|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            569999999999999999999999999999999999999999998877777766655556553  468899999999999


Q ss_pred             HHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHH
Q 038906          181 LGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVT  260 (276)
Q Consensus       181 ~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~i~  260 (276)
                      ..+...|.|+++++++++|++|+++|+|+++++++++|||++++++++++++++||++++.+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccC
Q 038906          261 NQSRNVFSKKFMVRK  275 (276)
Q Consensus       261 ~al~~V~~Kkll~~k  275 (276)
                      +++|+++.||+++++
T Consensus       206 ~a~~~i~~k~~~~~~  220 (350)
T PTZ00343        206 SSLRSIFAKKTMKNK  220 (350)
T ss_pred             HHHHHHHHHHHhccc
Confidence            999999999999765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=2.1e-30  Score=241.01  Aligned_cols=174  Identities=40%  Similarity=0.636  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-ChHHHHHHHHHHHH
Q 038906          102 IQTLQLGGMFGLWYLLNIYFNIFNKQVLK--VFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKL-TRSQFAVILPLAVA  178 (276)
Q Consensus       102 ~~~l~~~~~~~~w~~~s~~~~i~nK~iL~--~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~-s~~~~~~~lplgl~  178 (276)
                      ++......++..||++|+.++++||++++  +|+||+++|.+|+.++.+...+.+.++..+.++. ++.+++.++|+|++
T Consensus        13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~   92 (316)
T KOG1441|consen   13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV   92 (316)
T ss_pred             chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH
Confidence            47788999999999999999999999999  8999999999999999998888888888776665 45789999999999


Q ss_pred             HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 038906          179 DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASN  258 (276)
Q Consensus       179 ~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~  258 (276)
                      ++++++++|.|+.|+||||+|++|+++|++++++++++.+|++++.+++++++++.||.+++.+|.+||+.|++.+++++
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~  172 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN  172 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccC
Q 038906          259 VTNQSRNVFSKKFMVRK  275 (276)
Q Consensus       259 i~~al~~V~~Kkll~~k  275 (276)
                      +.+++|+|++|+++++|
T Consensus       173 ~~~al~~I~~~~ll~~~  189 (316)
T KOG1441|consen  173 LAFALRNILSKKLLTSK  189 (316)
T ss_pred             HHHHHHHHHHHHhhhcc
Confidence            99999999999999754

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.95  E-value=6.9e-27  Score=215.44  Aligned_cols=169  Identities=54%  Similarity=0.892  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 038906          105 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNL  184 (276)
Q Consensus       105 l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~  184 (276)
                      +++++++++||..|+.++++||+++++|++|+++++.|+.++.+++.+.|..+..++++.++++++.++++|++++.++.
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999999999987776665544455667789999999999999999999


Q ss_pred             HHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 038906          185 LTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSR  264 (276)
Q Consensus       185 l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~i~~al~  264 (276)
                      ++|++++|+++++++++|+++|+|+++++++++|||++++++++++++++|+.+.+.++.+++..|+++++++++++++|
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988777788899999999999999999


Q ss_pred             HHHHHhhcc
Q 038906          265 NVFSKKFMV  273 (276)
Q Consensus       265 ~V~~Kkll~  273 (276)
                      +++.||.++
T Consensus       161 ~v~~k~~~~  169 (302)
T TIGR00817       161 NIFSKKAMT  169 (302)
T ss_pred             HHHHHHhhc
Confidence            999999887

specificities overlap.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.88  E-value=3.1e-22  Score=182.90  Aligned_cols=181  Identities=24%  Similarity=0.303  Sum_probs=161.1

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcC----CCCCCh-HHHH
Q 038906           96 PEPSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYT----RPKLTR-SQFA  170 (276)
Q Consensus        96 ~~~~~~~~~l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~----~~~~s~-~~~~  170 (276)
                      -+...+.+...+.+++.+||.+|++..+++|+.-.+|+||++++.+|+++-.++..........+    +.+.+| ++.+
T Consensus         6 ~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr   85 (349)
T KOG1443|consen    6 LDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLR   85 (349)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHH
Confidence            34678888999999999999999999999999999999999999999998777654433221111    223454 5678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHH
Q 038906          171 VILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTG  250 (276)
Q Consensus       171 ~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G  250 (276)
                      .++|.|++.++.++++|+|++|+++++|+|.|+.+++|+.+++.+|.-|++++.-.+..+++.+|+.+.++++.+||..|
T Consensus        86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~G  165 (349)
T KOG1443|consen   86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEG  165 (349)
T ss_pred             HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCC
Q 038906          251 FCSAMASNVTNQSRNVFSKKFMVRKE  276 (276)
Q Consensus       251 ~l~alls~i~~al~~V~~Kkll~~k~  276 (276)
                      +.+++++.++.++|+.+.|+++++.+
T Consensus       166 f~lv~~aS~~sGlRW~~tQ~ll~~~~  191 (349)
T KOG1443|consen  166 FFLVLAASLLSGLRWAFTQMLLRNQP  191 (349)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence            99999999999999999999998753

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.80  E-value=1.8e-18  Score=159.43  Aligned_cols=172  Identities=20%  Similarity=0.233  Sum_probs=159.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHH--HHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHH
Q 038906          105 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTA--FQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLG  182 (276)
Q Consensus       105 l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~--~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~  182 (276)
                      .......+.|..+|+.+.+.||+++++++||..++.  .|.+++.+.+.+....+..+.++++++..|+++|+++++.++
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence            344456677778899999999999999999998888  899999988888778888888899999999999999999999


Q ss_pred             HHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHH
Q 038906          183 NLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQ  262 (276)
Q Consensus       183 ~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~i~~a  262 (276)
                      ..++..+++|++++.+.++|..+|+++++.+..++|.+++...|.+++.+.+|......+|.++|..|+.+++.+.++.+
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a  170 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTA  170 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCC
Q 038906          263 SRNVFSKKFMVRKE  276 (276)
Q Consensus       263 l~~V~~Kkll~~k~  276 (276)
                      .+.++.||..+.++
T Consensus       171 ~~~v~~kk~vd~~~  184 (314)
T KOG1444|consen  171 AFVVYVKKSVDSAN  184 (314)
T ss_pred             HHHHHHHHhhcccc
Confidence            99999999887653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.68  E-value=1.2e-15  Score=141.33  Aligned_cols=160  Identities=19%  Similarity=0.258  Sum_probs=130.8

Q ss_pred             HHHHHHHHHHHHHHHhhc--C-CchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 038906          114 WYLLNIYFNIFNKQVLKV--F-PYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISL  190 (276)
Q Consensus       114 w~~~s~~~~i~nK~iL~~--f-~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al  190 (276)
                      .|..-....++++++.+.  . ++|++++++|+++..++..+.....  +.++.++..++..+++++++.++..++|.|+
T Consensus         8 i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen    8 IFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            334334455777777763  2 3799999999999887665433222  2233456678889999999999999999999


Q ss_pred             hccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc----ccc------HHHHHHHHHHHHH
Q 038906          191 GTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA----SFN------WTGFCSAMASNVT  260 (276)
Q Consensus       191 ~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~----~f~------~~G~l~alls~i~  260 (276)
                      +|+|+++++++|++.|+++++++++++|||+++++|++++++++|+++...+|.    ..+      ..|+++.+++.++
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~  165 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLL  165 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999886542    111      2399999999999


Q ss_pred             HHHHHHHHHhhcccC
Q 038906          261 NQSRNVFSKKFMVRK  275 (276)
Q Consensus       261 ~al~~V~~Kkll~~k  275 (276)
                      ++.+++++||++++.
T Consensus       166 ~a~~~~~qe~~~~~~  180 (303)
T PF08449_consen  166 DAFTGVYQEKLFKKY  180 (303)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998653

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.58  E-value=1.4e-15  Score=137.80  Aligned_cols=175  Identities=21%  Similarity=0.331  Sum_probs=150.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCchHHHHHHHHHHHHHHHHHH-HHhhh----cCCC--CCChH
Q 038906           99 SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV----FPYPTTVTAFQFGCGSVMIILM-WTLNL----YTRP--KLTRS  167 (276)
Q Consensus        99 ~~~~~~l~~~~~~~~w~~~s~~~~i~nK~iL~~----f~~P~~Lt~~q~~v~~l~l~l~-~~~~~----~~~~--~~s~~  167 (276)
                      .-..+..++...+..++.+++.+.+.||++++.    .+.|.+++..|+++...++... +....    +..|  +++-+
T Consensus        21 ~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~  100 (347)
T KOG1442|consen   21 VLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLA  100 (347)
T ss_pred             HHHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHH
Confidence            344557777778888899999999999999984    6789999999999988766543 33211    2222  35567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc---c
Q 038906          168 QFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE---A  244 (276)
Q Consensus       168 ~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e---~  244 (276)
                      ..+.++|+++.+.+++.++|++++|++|+|+++-++++.+|+++++++++|+|-+.....+.+++++|-.+-+..|   .
T Consensus       101 t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~  180 (347)
T KOG1442|consen  101 TARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTG  180 (347)
T ss_pred             HHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccC
Confidence            7889999999999999999999999999999999999999999999999999999999999999999988888776   4


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038906          245 SFNWTGFCSAMASNVTNQSRNVFSKKFMV  273 (276)
Q Consensus       245 ~f~~~G~l~alls~i~~al~~V~~Kkll~  273 (276)
                      .+++.|.++++.|.++-++..|+.||.+.
T Consensus       181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~  209 (347)
T KOG1442|consen  181 TLSWIGVIFGVLASLAVALNAIYTKKVLP  209 (347)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHhhheecc
Confidence            57899999999999999999999998764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.56  E-value=2.6e-13  Score=121.39  Aligned_cols=148  Identities=14%  Similarity=0.125  Sum_probs=122.5

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFTH  199 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~~  199 (276)
                      ..+..|+.++....|..+++.|++++.+++.+....+      .++++++..+..+.+ +.++..+.+.|++|++++.+.
T Consensus         4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            3467899988755488888889888877655433221      235566666777765 678889999999999999999


Q ss_pred             hhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 038906          200 TIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT-EASFNWTGFCSAMASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       200 ~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~-e~~f~~~G~l~alls~i~~al~~V~~Kkll~~  274 (276)
                      ++.++.|+++++++.+++|||++++++.++++.+.|+.+.... +.+.+..|++++++++++++.++++.||..++
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~  153 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK  153 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence            9999999999999999999999999999999999999987644 34556889999999999999999999998754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.55  E-value=9.7e-13  Score=121.11  Aligned_cols=149  Identities=15%  Similarity=0.195  Sum_probs=122.6

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHH-hccchhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVAD-TLGNLLTNISL-GTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~-~~~~~l~n~al-~~vsvs~~  198 (276)
                      ..+..|..+++.+ |..++++|++++.++++.....+  ++...++++++....+|++. ..++.+.+.+. ++++++.+
T Consensus        23 ~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   99 (292)
T PRK11272         23 TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLR--GHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA   99 (292)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence            4578899998888 99999999999887654432222  22223567788888888874 56677888888 99999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT-EASFNWTGFCSAMASNVTNQSRNVFSKKFMV  273 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~-e~~f~~~G~l~alls~i~~al~~V~~Kkll~  273 (276)
                      .++-++.|+++.+++.+ +|||+++++++++++.++|+.+...+ +.+.+..|.+++++++++|+.++++.||..+
T Consensus       100 ~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~  174 (292)
T PRK11272        100 AVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPL  174 (292)
T ss_pred             HHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999986 69999999999999999999988643 3456678999999999999999999999754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.53  E-value=5.8e-13  Score=122.83  Aligned_cols=158  Identities=18%  Similarity=0.182  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 038906          107 LGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLT  186 (276)
Q Consensus       107 ~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~  186 (276)
                      ....+.+|..    .....|..++.+| |..+.++|+.++.+++....     ++++..+++++..+.-++.+...+.+.
T Consensus         9 ~l~a~~~Wg~----~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~   78 (295)
T PRK11689          9 GLIAILLWST----MVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV-----GFPRLRQFPKRYLLAGGLLFVSYEICL   78 (295)
T ss_pred             HHHHHHHHHH----HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc-----cccccccccHHHHHHHhHHHHHHHHHH
Confidence            4445555554    3477899999998 99999999999887654321     112222222333333333455566666


Q ss_pred             HHHHh----ccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc-----------cccHHHH
Q 038906          187 NISLG----TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA-----------SFNWTGF  251 (276)
Q Consensus       187 n~al~----~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~-----------~f~~~G~  251 (276)
                      +.+++    +.+++.+.++.++.|+++++++.+++|||+++++++++++..+|+.+....+.           ..+..|.
T Consensus        79 ~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~  158 (295)
T PRK11689         79 ALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSY  158 (295)
T ss_pred             HHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHH
Confidence            66665    45777788999999999999999999999999999999999999998875432           1235699


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccc
Q 038906          252 CSAMASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       252 l~alls~i~~al~~V~~Kkll~~  274 (276)
                      +++++++++|+.++++.||..++
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~~  181 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYARG  181 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999999998654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.51  E-value=1.4e-12  Score=124.23  Aligned_cols=158  Identities=13%  Similarity=0.135  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHHHH-hhh-cCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 038906          116 LLNIYFNIFNKQVLKV-FPYPTTVTAFQFGCGSVMIILMWT-LNL-YTRPKLTRSQFAVILPLAVADTLGNLLTNISLGT  192 (276)
Q Consensus       116 ~~s~~~~i~nK~iL~~-f~~P~~Lt~~q~~v~~l~l~l~~~-~~~-~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~  192 (276)
                      ..+.++.++.|..++. .+ |..+.++|++++++++..... .+. .+.++.+++++..+..+|++......+.+.+++|
T Consensus        23 ~~~~~~~~~~k~a~~~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~  101 (358)
T PLN00411         23 TSVVGISTLFKVATSKGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEY  101 (358)
T ss_pred             HHHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3455577888999885 45 888999999998876654322 221 2224445777788888888875566789999999


Q ss_pred             cchhhhhhhccchHHHHHHHHHHH------hcccCChhhHHHHHHHHHhhhhhccc-cc---------------------
Q 038906          193 VNVSFTHTIKAMEPFFTVLFAALF------LREKPTIWLVPSLVPIVGGVALASLT-EA---------------------  244 (276)
Q Consensus       193 vsvs~~~~ika~~Pvftvils~l~------l~er~s~~~~lsl~liv~GV~La~~~-e~---------------------  244 (276)
                      ++++.+.++-++.|+|+++++.++      ++||+++.+++++++.++|+.+.... +.                     
T Consensus       102 tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~  181 (358)
T PLN00411        102 SNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLS  181 (358)
T ss_pred             ccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccC
Confidence            999999999999999999999999      69999999999999999999986531 11                     


Q ss_pred             --ccc-HHHHHHHHHHHHHHHHHHHHHHhhccc
Q 038906          245 --SFN-WTGFCSAMASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       245 --~f~-~~G~l~alls~i~~al~~V~~Kkll~~  274 (276)
                        ..+ ..|.+++++++++|+++++++|+..++
T Consensus       182 ~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~  214 (358)
T PLN00411        182 SSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE  214 (358)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              112 459999999999999999999988654

>TIGR00688 rarD rarD protein

Probab=99.48  E-value=3.2e-12  Score=115.10  Aligned_cols=158  Identities=13%  Similarity=0.113  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH-HhhhcC----C-CCCChHH-HHHHHHHHHH
Q 038906          106 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMW-TLNLYT----R-PKLTRSQ-FAVILPLAVA  178 (276)
Q Consensus       106 ~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~-~~~~~~----~-~~~s~~~-~~~~lplgl~  178 (276)
                      .....+.+|...    .+..|. +.+++ |..++++|++++.+++.+.. ..+.++    + .+..+++ +......|++
T Consensus         6 ~~i~a~~~wg~~----~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         6 VSLLASFLFGYM----YYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             HHHHHHHHHHHH----HHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            344455555553    356787 55687 99999999999887654322 222111    0 0112222 3345666777


Q ss_pred             HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 038906          179 DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASN  258 (276)
Q Consensus       179 ~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~  258 (276)
                      ...+..+.++++++++++.+.++.++.|+|+++++.+++|||+++++++++++.+.|+.+....+.+.+    .++++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa  155 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLA  155 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHH
Confidence            788899999999999999999999999999999999999999999999999999999998754322222    3578899


Q ss_pred             HHHHHHHHHHHhhcc
Q 038906          259 VTNQSRNVFSKKFMV  273 (276)
Q Consensus       259 i~~al~~V~~Kkll~  273 (276)
                      ++++.|.+..|+..+
T Consensus       156 ~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       156 FSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHHHHHHHHhhcCC
Confidence            999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.47  E-value=5.3e-12  Score=116.56  Aligned_cols=155  Identities=17%  Similarity=0.225  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHH-HHHH
Q 038906          106 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADT-LGNL  184 (276)
Q Consensus       106 ~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~-~~~~  184 (276)
                      .......+|...    ....|..+++++ |..++++|+.++.+.+....  .   +++..   ++..+..+++.. ....
T Consensus         8 ~~l~~~~~Wg~~----~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~--~---~~~~~---~~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          8 LALLVVVVWGLN----FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV--A---RPKVP---LNLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHhhh----HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh--c---CCCCc---hHHHHHHHHHHHHHHHH
Confidence            344445555543    356799998888 99999999998765443321  1   12222   233455566543 3345


Q ss_pred             HHHHHHhc-cchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHHHH
Q 038906          185 LTNISLGT-VNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE---ASFNWTGFCSAMASNVT  260 (276)
Q Consensus       185 l~n~al~~-vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e---~~f~~~G~l~alls~i~  260 (276)
                      +...+++| +|++.+.++-++.|+++.+++++++|||++.++++++++.++|+.+....+   .+.++.|++++++++++
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~  154 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS  154 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence            66678887 699999999999999999999999999999999999999999999887532   23456899999999999


Q ss_pred             HHHHHHHHHhhcc
Q 038906          261 NQSRNVFSKKFMV  273 (276)
Q Consensus       261 ~al~~V~~Kkll~  273 (276)
                      |+.+++++||..+
T Consensus       155 ~a~~~v~~~~~~~  167 (299)
T PRK11453        155 WACGNIFNKKIMS  167 (299)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.45  E-value=7.8e-12  Score=115.38  Aligned_cols=162  Identities=13%  Similarity=0.094  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCChHHHHHHHHHHHH
Q 038906          103 QTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRP----KLTRSQFAVILPLAVA  178 (276)
Q Consensus       103 ~~l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~----~~s~~~~~~~lplgl~  178 (276)
                      ..+.......+|...    .++.|.. .+++ |..++++|++++.+++...+..+..+..    ..+++.+...+.-++.
T Consensus         9 g~~~~l~a~~~wg~~----~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          9 GVLLALAAYFIWGIA----PAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            344444444555443    2445775 5677 9999999999988755443322110000    0123333222333344


Q ss_pred             HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 038906          179 DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASN  258 (276)
Q Consensus       179 ~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~  258 (276)
                      .+.++.+.+++++++|++.+.++.++.|+++++++++++|||+++++++++++.+.|+.+....+.+..    .++++++
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa  158 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLA  158 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHH
Confidence            667899999999999999999999999999999999999999999999999999999998763222221    4577889


Q ss_pred             HHHHHHHHHHHhhccc
Q 038906          259 VTNQSRNVFSKKFMVR  274 (276)
Q Consensus       259 i~~al~~V~~Kkll~~  274 (276)
                      ++|+.|+++.|+..++
T Consensus       159 ~~~a~~~i~~r~~~~~  174 (296)
T PRK15430        159 FSFAFYGLVRKKIAVE  174 (296)
T ss_pred             HHHHHHHHHHHhcCCC
Confidence            9999999999997543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.42  E-value=1.5e-11  Score=115.90  Aligned_cols=158  Identities=15%  Similarity=0.170  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 038906          118 NIYFNIFNKQVLK-VFPYPTTVTAFQFGCGSVMIILMWTLNLYT--RPKLTRSQFAVILPLAVADTLGNLLTNISLGTVN  194 (276)
Q Consensus       118 s~~~~i~nK~iL~-~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~--~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vs  194 (276)
                      ...++..+..+-+ +++.|.+-+++-.+.-.++.......+..+  ..+.-++++.+.+.+|++...++.+.+.|++|++
T Consensus        25 ~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs  104 (334)
T PF06027_consen   25 ITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTS  104 (334)
T ss_pred             HHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            3344555555544 477788877665444222211111121111  1112345667777889999999999999999999


Q ss_pred             hhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc---------cccHHHHHHHHHHHHHHHHHH
Q 038906          195 VSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA---------SFNWTGFCSAMASNVTNQSRN  265 (276)
Q Consensus       195 vs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~---------~f~~~G~l~alls~i~~al~~  265 (276)
                      ++-++++..+.-+|+++++++++++|+++.+++++++.++|+.+....|.         +-...|.+++++++++++++|
T Consensus       105 vtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~n  184 (334)
T PF06027_consen  105 VTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSN  184 (334)
T ss_pred             HhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998876542         124899999999999999999


Q ss_pred             HHHHhhcccC
Q 038906          266 VFSKKFMVRK  275 (276)
Q Consensus       266 V~~Kkll~~k  275 (276)
                      ++.|++.++.
T Consensus       185 V~~E~~v~~~  194 (334)
T PF06027_consen  185 VLEEKLVKKA  194 (334)
T ss_pred             HHHHHhcccC
Confidence            9999998765

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.34  E-value=7.3e-11  Score=108.78  Aligned_cols=143  Identities=17%  Similarity=0.206  Sum_probs=112.8

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhc
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIK  202 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ik  202 (276)
                      ...|+.+++++ |..+.++|++++.+++.+....   ++.+.++++++..+..|++......+.+++++|+|++.+.++.
T Consensus        29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~  104 (293)
T PRK10532         29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKP---WRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE  104 (293)
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhH---HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            46899999998 9999999999998766543211   1223457788888888888877888889999999999999999


Q ss_pred             cchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 038906          203 AMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT--E-ASFNWTGFCSAMASNVTNQSRNVFSKKFMVRK  275 (276)
Q Consensus       203 a~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~--e-~~f~~~G~l~alls~i~~al~~V~~Kkll~~k  275 (276)
                      .+.|+++++++.    |++..  ...+.+.+.|+.+....  + .+.+..|.++++++.++|+.+.++.||..++.
T Consensus       105 ~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~  174 (293)
T PRK10532        105 FTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEH  174 (293)
T ss_pred             HHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999998873    66554  44566778998876532  2 23467899999999999999999999987653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.30  E-value=3.9e-11  Score=94.60  Aligned_cols=118  Identities=25%  Similarity=0.447  Sum_probs=99.1

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH-HHhhhcCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILM-WTLNLYTRPKLTRSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~-~~~~~~~~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~  198 (276)
                      ..+++|...++++ |...+++|+.++.+ +.+. ...+..+..+.+++++...+.++++ ...+..+.+.++++++++.+
T Consensus         6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            4578899999988 99999999999886 3332 2222222245567777888888887 58899999999999999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .++..++|++++++++++++|++++.+++++++++.|+.+..
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.24  E-value=6.2e-10  Score=101.82  Aligned_cols=149  Identities=15%  Similarity=0.138  Sum_probs=108.5

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhh--hcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLN--LYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~--~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~  198 (276)
                      .++.+|...++-+ +.  +...+.++.+++......+  ..+.++.+++.+...+..++....++.+.+.++++.+++..
T Consensus        16 ~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   92 (281)
T TIGR03340        16 WNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLV   92 (281)
T ss_pred             HHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence            4567787776632 43  2444444444333222221  11112223444444455555677888999999999999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE-ASFNWTGFCSAMASNVTNQSRNVFSKKFM  272 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e-~~f~~~G~l~alls~i~~al~~V~~Kkll  272 (276)
                      ..+.++.|+++++++.+++|||+++++++++++++.|+.+....+ ...+..|+.++++++++|+.|+++.|+..
T Consensus        93 ~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~  167 (281)
T TIGR03340        93 YPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAA  167 (281)
T ss_pred             hhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccc
Confidence            999999999999999999999999999999999999999876433 23456788899999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.19  E-value=3.9e-09  Score=94.46  Aligned_cols=150  Identities=19%  Similarity=0.207  Sum_probs=108.3

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhc
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIK  202 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ik  202 (276)
                      ...|........+....+.|+.++.++.......+.....+..+..++..+.-++....+..+.+.++++++++.+.++.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  103 (292)
T COG0697          24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII  103 (292)
T ss_pred             HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence            44455555422245555558887776532222111110111111122333444445677788999999999999999999


Q ss_pred             cchHHHHHHHHH-HHhcccCChhhHHHHHHHHHhhhhhccccccc---cHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038906          203 AMEPFFTVLFAA-LFLREKPTIWLVPSLVPIVGGVALASLTEASF---NWTGFCSAMASNVTNQSRNVFSKKFM  272 (276)
Q Consensus       203 a~~Pvftvils~-l~l~er~s~~~~lsl~liv~GV~La~~~e~~f---~~~G~l~alls~i~~al~~V~~Kkll  272 (276)
                      ++.|+++.+++. ++++||+++.++.+++....|+.+....+...   +..|..+++++.++++.++++.|+..
T Consensus       104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999997 77799999999999999999999998765443   36899999999999999999999876

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.14  E-value=5.2e-10  Score=101.37  Aligned_cols=111  Identities=21%  Similarity=0.268  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc-
Q 038906          166 RSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA-  244 (276)
Q Consensus       166 ~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~-  244 (276)
                      +++.......+++|++.+.+.+.++++++.+.+|+++.+..++|++++++++|+|.+..+|++++++++|+++...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4566777888899999999999999999999999999999999999999999999999999999999999999864321 


Q ss_pred             --------c--------ccHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 038906          245 --------S--------FNWTGFCSAMASNVTNQSRNVFSKKFMVRKE  276 (276)
Q Consensus       245 --------~--------f~~~G~l~alls~i~~al~~V~~Kkll~~k~  276 (276)
                              .        -.+.|+++++++.++.++..|+.+|++|+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                    1        1368999999999999999999999999874

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.09  E-value=3.9e-10  Score=100.12  Aligned_cols=158  Identities=16%  Similarity=0.140  Sum_probs=131.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 038906          111 FGLWYLLNIYFNIFNKQVLKV--FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNI  188 (276)
Q Consensus       111 ~~~w~~~s~~~~i~nK~iL~~--f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~  188 (276)
                      ++.|.+.|+.+++.||++++.  |+.-..+.++|-+++.+-+.+....+..+.   ...+.|.++|++++....+..+..
T Consensus        11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SK   87 (309)
T COG5070          11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSK   87 (309)
T ss_pred             HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhccc
Confidence            456678899999999999985  665667788898887766555554444332   244678889999999999999999


Q ss_pred             HHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccccc--------ccHHHHHHHHHHHHH
Q 038906          189 SLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEAS--------FNWTGFCSAMASNVT  260 (276)
Q Consensus       189 al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~--------f~~~G~l~alls~i~  260 (276)
                      +++|.+++.+++.|.++.+.++..+..++|.+.+-....+..++++.-..+.++|.+        +| .|+++....+++
T Consensus        88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls  166 (309)
T COG5070          88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS  166 (309)
T ss_pred             ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence            999999999999999999999999999999999999999999999999999888763        34 488888888999


Q ss_pred             HHHHHHHHHhhc
Q 038906          261 NQSRNVFSKKFM  272 (276)
Q Consensus       261 ~al~~V~~Kkll  272 (276)
                      .+.+-...||..
T Consensus       167 saafVL~mrkri  178 (309)
T COG5070         167 SAAFVLIMRKRI  178 (309)
T ss_pred             HHHHHHHHHHhh
Confidence            888887777653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.01  E-value=3.9e-10  Score=100.91  Aligned_cols=154  Identities=14%  Similarity=0.158  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHhh-----------cCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 038906          116 LLNIYFNIFNKQVLK-----------VFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNL  184 (276)
Q Consensus       116 ~~s~~~~i~nK~iL~-----------~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~  184 (276)
                      .+.+.+.+....+.+           .|.|...+.++|+.+..++.-+...  .++..+.+...-+.....++-|.+.++
T Consensus        23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMV  100 (337)
T KOG1580|consen   23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMV  100 (337)
T ss_pred             heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHH
Confidence            333345566666654           3778899999999998887644332  234445555555667788888999999


Q ss_pred             HHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc-------cccHHHHHHHHHH
Q 038906          185 LTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA-------SFNWTGFCSAMAS  257 (276)
Q Consensus       185 l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~-------~f~~~G~l~alls  257 (276)
                      .+|.|++|+|.+...+-|+..|+-+++++.++.+++++|++|+++++|++||++..++|.       .....|-++.++|
T Consensus       101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lS  180 (337)
T KOG1580|consen  101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILS  180 (337)
T ss_pred             hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999988642       2235788999999


Q ss_pred             HHHHHHHHHHHHhh
Q 038906          258 NVTNQSRNVFSKKF  271 (276)
Q Consensus       258 ~i~~al~~V~~Kkl  271 (276)
                      .-..++....+.+.
T Consensus       181 L~mDGlTg~~Qdri  194 (337)
T KOG1580|consen  181 LAMDGLTGSIQDRI  194 (337)
T ss_pred             HHhcccchhHHHHH
Confidence            88888888777664

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.98  E-value=2.9e-08  Score=91.57  Aligned_cols=173  Identities=13%  Similarity=0.058  Sum_probs=139.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHH
Q 038906          100 AAIQTLQLGGMFGLWYLLNIYFNIFNKQVLK--------VFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAV  171 (276)
Q Consensus       100 ~~~~~l~~~~~~~~w~~~s~~~~i~nK~iL~--------~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~  171 (276)
                      ..++.+.+++.+.--|+.-....++...+.+        .|..|.++.++|-+++.++...+.  +.++.+...++.+..
T Consensus         8 ~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l--~~~k~~~~~~apl~~   85 (327)
T KOG1581|consen    8 MANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAML--KWWKKELSGVAPLYK   85 (327)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHH--hcccccCCCCCchhH
Confidence            3456666666555555555556667766655        377899999999888877664332  233444444567888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc--------
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE--------  243 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e--------  243 (276)
                      ...+++.+..+-.++..|++|++.+...+.|+..-+-+++...++.++|++..+|+..+++.+||.+....+        
T Consensus        86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~  165 (327)
T KOG1581|consen   86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKS  165 (327)
T ss_pred             HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcccc
Confidence            889999999999999999999999999999999999999999999999999999999999999999976531        


Q ss_pred             -ccccHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 038906          244 -ASFNWTGFCSAMASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       244 -~~f~~~G~l~alls~i~~al~~V~~Kkll~~  274 (276)
                       ...+.+|+.+...+.+.+++.|..+++++++
T Consensus       166 g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~  197 (327)
T KOG1581|consen  166 GRENSPIGILLLFGYLLFDGFTNATQDSLFKK  197 (327)
T ss_pred             CCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc
Confidence             1246899999999999999999999998874

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.95  E-value=1.6e-08  Score=82.74  Aligned_cols=119  Identities=20%  Similarity=0.198  Sum_probs=98.2

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH-HhhhcCCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMW-TLNLYTRP-KLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~-~~~~~~~~-~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~  198 (276)
                      ..++.|..+++.+ |.+-|++|-.+...++.... ..+....+ .++.+.|.-+..-|+...++-.++.+|++...+|..
T Consensus        18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V   96 (140)
T COG2510          18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV   96 (140)
T ss_pred             HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence            4588999999997 99999999888766554332 22322222 246677776777777788899999999999999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .=+-.++|+++++++.+|+|||++.+++++++++++|+.+.+
T Consensus        97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999998764

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.95  E-value=3e-09  Score=96.94  Aligned_cols=170  Identities=15%  Similarity=0.093  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C-CchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH
Q 038906          102 IQTLQLGGMFGLWYLLNIYFNIFNKQVLKV--F-PYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA  178 (276)
Q Consensus       102 ~~~l~~~~~~~~w~~~s~~~~i~nK~iL~~--f-~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~  178 (276)
                      ++..++.+.+.-.++......+...++++.  | ||-|.+|++|+++-..+.++-.. ...  ++.....||....++.+
T Consensus        39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~-~~~--~k~r~iP~rtY~~la~~  115 (367)
T KOG1582|consen   39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ-LIQ--TKRRVIPWRTYVILAFL  115 (367)
T ss_pred             chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE-eec--ccceecchhHhhhhHhh
Confidence            355677777777677777778899999884  6 58899999999885544332111 011  11123457888999999


Q ss_pred             HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc----ccccHHHHHHH
Q 038906          179 DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE----ASFNWTGFCSA  254 (276)
Q Consensus       179 ~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e----~~f~~~G~l~a  254 (276)
                      ....+.++|-|+.|.+.+...+.|.+.-+-+++.+.++.|+|+++..+.+..++++|.++....|    .+||..|+.+.
T Consensus       116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mI  195 (367)
T KOG1582|consen  116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMI  195 (367)
T ss_pred             hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988655    56899999999


Q ss_pred             HHHHHHHHHHHHHHHhhccc
Q 038906          255 MASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       255 lls~i~~al~~V~~Kkll~~  274 (276)
                      -.+.++.|+-.-.++|.|+.
T Consensus       196 sgALl~DA~iGNvQEk~m~~  215 (367)
T KOG1582|consen  196 SGALLADAVIGNVQEKAMKM  215 (367)
T ss_pred             HHHHHHHHHhhHHHHHHHhh
Confidence            99999999988888887764

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.87  E-value=1.2e-08  Score=96.38  Aligned_cols=107  Identities=22%  Similarity=0.244  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc----
Q 038906          169 FAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA----  244 (276)
Q Consensus       169 ~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~----  244 (276)
                      .+..+....+....+.++|.|+.+.+|+-.+++-+++-+||.+++.++.+||+++.+.+++++.++||++.+.++.    
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence            3445555666778999999999999999999999999999999999999999999999999999999999987632    


Q ss_pred             ----cccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 038906          245 ----SFNWTGFCSAMASNVTNQSRNVFSKKFMVRK  275 (276)
Q Consensus       245 ----~f~~~G~l~alls~i~~al~~V~~Kkll~~k  275 (276)
                          +-...|.++++++++.|++|.++.||-..+|
T Consensus       239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e  273 (416)
T KOG2765|consen  239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE  273 (416)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence                2248999999999999999999999988776

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.81  E-value=2.9e-08  Score=79.12  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc
Q 038906          168 QFAVILPLAVADT-LGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA  244 (276)
Q Consensus       168 ~~~~~lplgl~~~-~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~  244 (276)
                      .+...+..|++.. .+..+.++|+++.| +.+..+.++.|+|+++++.+++|||++++++++++++++|+++...++.
T Consensus        33 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   33 PWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            3444556677654 78899999999999 6888999999999999999999999999999999999999999987654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.72  E-value=6.5e-07  Score=82.81  Aligned_cols=156  Identities=22%  Similarity=0.206  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC-hHHHHHHHHHHHHHHHHHHH
Q 038906          107 LGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLT-RSQFAVILPLAVADTLGNLL  185 (276)
Q Consensus       107 ~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s-~~~~~~~lplgl~~~~~~~l  185 (276)
                      ....+.+|....    ...|++. .++.++.+   ++.++.+++.+....  .+.++.+ ++.+..-+.-|+++..++.+
T Consensus         6 ~lia~~~wGs~g----~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~--~~~~~~~~~~~~~~g~l~G~~w~ig~~~   75 (290)
T TIGR00776         6 ALIPALFWGSFV----LINVKIG-GGPYSQTL---GTTFGALILSIAIAI--FVLPEFWALSIFLVGLLSGAFWALGQIN   75 (290)
T ss_pred             HHHHHHHHhhhH----HHHhccC-CCHHHHHH---HHHHHHHHHHHHHHH--HhCCcccccHHHHHHHHHHHHHHhhhhh
Confidence            344556666544    3345554 55544443   455565544332221  1222222 33444445556668889999


Q ss_pred             HHHHHhccchhhhhhhcc-chHHHHHHHHHHHhcccCChhh----HHHHHHHHHhhhhhcccccc-------cc-HHHHH
Q 038906          186 TNISLGTVNVSFTHTIKA-MEPFFTVLFAALFLREKPTIWL----VPSLVPIVGGVALASLTEAS-------FN-WTGFC  252 (276)
Q Consensus       186 ~n~al~~vsvs~~~~ika-~~Pvftvils~l~l~er~s~~~----~lsl~liv~GV~La~~~e~~-------f~-~~G~l  252 (276)
                      ...+.+++.++.+..+-+ +.++++.+.+.+++||+.++++    ++++++++.|+.+....+.+       .| ..|++
T Consensus        76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~  155 (290)
T TIGR00776        76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL  155 (290)
T ss_pred             HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence            999999999999988888 8888999999999999999999    99999999999997653211       34 78999


Q ss_pred             HHHHHHHHHHHHHHHHHhhc
Q 038906          253 SAMASNVTNQSRNVFSKKFM  272 (276)
Q Consensus       253 ~alls~i~~al~~V~~Kkll  272 (276)
                      ++++|.++++.+.+..|+..
T Consensus       156 ~~l~sg~~y~~~~~~~~~~~  175 (290)
T TIGR00776       156 LLLMSTIGYLVYVVVAKAFG  175 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.68  E-value=1.2e-06  Score=78.20  Aligned_cols=116  Identities=19%  Similarity=0.200  Sum_probs=88.7

Q ss_pred             HHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhh
Q 038906          121 FNIFNKQVLKVFPY-PTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~-P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~  198 (276)
                      ..++.|+..++.+. +..++.+++.++.+++....... .+.+..+.+++..++.++++ ..++..+.+.++++.+++.+
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            34678888876652 34555567888776654432221 12223355666667777776 56789999999999999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhh
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVA  237 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~  237 (276)
                      .++..++|++++++++++++|+++..++.+..+++.|++
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999863

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.62  E-value=2.4e-06  Score=77.39  Aligned_cols=141  Identities=17%  Similarity=0.183  Sum_probs=112.5

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhc
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIK  202 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ik  202 (276)
                      -+.|.++..+. |.-++.+|..++.+++...+.-   .+.+.++++++.++..|+.....+.+-..|++.+|.+.+..|.
T Consensus        29 s~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RP---wr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE  104 (292)
T COG5006          29 SFAKSLFPLVG-AAGVTALRLAIAALILLALFRP---WRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE  104 (292)
T ss_pred             HHHHHHccccC-hhhHHHHHHHHHHHHHHHHhhH---HHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence            35688877777 9999999999998876554421   2346788999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038906          203 AMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE---ASFNWTGFCSAMASNVTNQSRNVFSKKFMV  273 (276)
Q Consensus       203 a~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e---~~f~~~G~l~alls~i~~al~~V~~Kkll~  273 (276)
                      .+-|+.+.+++    .+|..  ....+.+.+.|+.+..-..   .+.|..|..+++.+..||+.|-+..||.-+
T Consensus       105 F~GPL~vA~~~----sRr~~--d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~  172 (292)
T COG5006         105 FTGPLAVALLS----SRRLR--DFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR  172 (292)
T ss_pred             hccHHHHHHHh----ccchh--hHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc
Confidence            99999888764    33433  3445556677777765322   457899999999999999999999998753

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.58  E-value=1.8e-06  Score=79.29  Aligned_cols=160  Identities=16%  Similarity=0.155  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHhh-------cCCchHHHHHHHHHHHHHHHHHHHHhhhcC-CCC-------CChH---H--HHHHHH
Q 038906          115 YLLNIYFNIFNKQVLK-------VFPYPTTVTAFQFGCGSVMIILMWTLNLYT-RPK-------LTRS---Q--FAVILP  174 (276)
Q Consensus       115 ~~~s~~~~i~nK~iL~-------~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~-~~~-------~s~~---~--~~~~lp  174 (276)
                      ..++..-++..||.=+       .|+.|..-+..-|+--.+|+.+..+.+.+. ++.       +..+   .  -+..+|
T Consensus        12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~   91 (372)
T KOG3912|consen   12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP   91 (372)
T ss_pred             hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence            4455555678888754       277787775544333334433333322211 110       0011   1  244678


Q ss_pred             HHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc----------
Q 038906          175 LAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA----------  244 (276)
Q Consensus       175 lgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~----------  244 (276)
                      -++|-..+..+-+.++.+.+++-+||++....+|+.+++..+++.+++.++|+++..+++|+++....|.          
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998876432          


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 038906          245 SFNWTGFCSAMASNVTNQSRNVFSKKFMVR  274 (276)
Q Consensus       245 ~f~~~G~l~alls~i~~al~~V~~Kkll~~  274 (276)
                      +--.+|.++.+++-+.-+.+.++-+|.+++
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~  201 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKK  201 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence            223789999999999999999999888765

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.51  E-value=5.2e-06  Score=76.54  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=86.7

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFTH  199 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~~  199 (276)
                      +++..|+..++.+ |..++ .+.+++.+.+....... ......+...+...+.++++ ..+++.+.|+++++++.+.+.
T Consensus       163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQ-AGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHc-cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            3466677766655 66654 45555554433222111 11122344455555677776 467888999999999999999


Q ss_pred             hhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          200 TIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       200 ~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      ++-.++|++.++++.++++|+++..++++.+++++|+++...
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.49  E-value=5.8e-06  Score=78.95  Aligned_cols=120  Identities=13%  Similarity=0.195  Sum_probs=87.6

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH-HHhhhcCC----CCCChHHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILM-WTLNLYTR----PKLTRSQFAVILPLAVADTLGNLLTNISLGTVNV  195 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~-~~~~~~~~----~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsv  195 (276)
                      .++..|....+++.+...+++++.++.+.+.+. ........    ...+.. ...++..+++-.+++.+-|++++++++
T Consensus       204 ~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga  282 (358)
T PLN00411        204 SFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGP  282 (358)
T ss_pred             HHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            346777777888756677778887776554332 22110000    011112 222444455545678889999999999


Q ss_pred             hhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          196 SFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       196 s~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      +.+.+...++|++++++++++++|++++.++++.+++++|+.++..
T Consensus       283 ~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        283 LYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999874

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.48  E-value=1.2e-05  Score=75.96  Aligned_cols=110  Identities=20%  Similarity=0.246  Sum_probs=96.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc--
Q 038906          166 RSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE--  243 (276)
Q Consensus       166 ~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e--  243 (276)
                      +++..++...+++|+..+-+...++.+.+.+++++...+..+.|++++.+++++|.++.+|.++++.++|+.+.-..+  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            334566777788899887799999999999999999999999999999999999999999999999999999986211  


Q ss_pred             ---------ccccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 038906          244 ---------ASFNWTGFCSAMASNVTNQSRNVFSKKFMVRK  275 (276)
Q Consensus       244 ---------~~f~~~G~l~alls~i~~al~~V~~Kkll~~k  275 (276)
                               .+-.+.|+..++.++++.++-+++.+|++|+.
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s  209 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS  209 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                     12248999999999999999999999999875

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.40  E-value=9.2e-06  Score=74.96  Aligned_cols=117  Identities=15%  Similarity=0.128  Sum_probs=84.0

Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHT  200 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~  200 (276)
                      +++++|+.-++.+ |+...  +.. +.+.+.+............+.+.+..++..++...+++.+.|+++++.+++.+.+
T Consensus       171 ~~v~~k~~~~~~~-~~~~~--~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~  246 (295)
T PRK11689        171 YCNVTRKYARGKN-GITLF--FIL-TALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLAT  246 (295)
T ss_pred             HHHHHhhccCCCC-chhHH--HHH-HHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence            4567777765554 65442  222 2222222111111111234556666666666656678999999999999999999


Q ss_pred             hccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          201 IKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       201 ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      +-.++|++.+++++++++|+++..++++.++++.|+.+...
T Consensus       247 ~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        247 ASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            99999999999999999999999999999999999988754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.39  E-value=1.2e-05  Score=74.02  Aligned_cols=119  Identities=18%  Similarity=0.096  Sum_probs=89.7

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH-HhhhcCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhhh
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMW-TLNLYTRPKLTRSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFTHT  200 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~-~~~~~~~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~~~  200 (276)
                      +.+|+.-.  +++...+.+|+.++...+.+.. ..........+.+.+..++.++++ ...++.+.++++++++++...+
T Consensus       167 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        167 VWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             HHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence            45666532  2356677889888776544332 211111111245667777777876 5678899999999999999999


Q ss_pred             hccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc
Q 038906          201 IKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE  243 (276)
Q Consensus       201 ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e  243 (276)
                      +..++|++.+++++++++|+++..++++.++++.|+.+....+
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998876543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.24  E-value=9.7e-05  Score=68.21  Aligned_cols=122  Identities=18%  Similarity=0.181  Sum_probs=87.2

Q ss_pred             HHHHHHHHhhcCCch--HHHHHHHHHHHHHHHHH-HHHhhhcC-----CCCCChHHHHHHHHHHHH-HHHHHHHHHHHHh
Q 038906          121 FNIFNKQVLKVFPYP--TTVTAFQFGCGSVMIIL-MWTLNLYT-----RPKLTRSQFAVILPLAVA-DTLGNLLTNISLG  191 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P--~~Lt~~q~~v~~l~l~l-~~~~~~~~-----~~~~s~~~~~~~lplgl~-~~~~~~l~n~al~  191 (276)
                      ++++.|+..++++.|  ..+...+++++.+.... ........     ....+.+.+..++.++++ ..+++.+.+.+++
T Consensus       158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~  237 (299)
T PRK11453        158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG  237 (299)
T ss_pred             HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346677766555434  33444555554433222 11111000     012355667777788876 4578899999999


Q ss_pred             ccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc
Q 038906          192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT  242 (276)
Q Consensus       192 ~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~  242 (276)
                      +.+...+.++..++|++.+++++++++|+++..++++.+++++|+.+...+
T Consensus       238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999887643

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.23  E-value=3.7e-05  Score=61.61  Aligned_cols=63  Identities=17%  Similarity=0.172  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          178 ADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       178 ~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      ++.....+-..+++++|++.+..+-++.++++++++++++||++++.+++++++++.|+++..
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            466788889999999999999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.18  E-value=1.8e-05  Score=72.31  Aligned_cols=68  Identities=16%  Similarity=0.170  Sum_probs=60.6

Q ss_pred             HHHHHH-HHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhh
Q 038906          171 VILPLA-VADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       171 ~~lplg-l~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      ..+..+ +....++.+.++++++++++.......++|++.++++++++||+++..++++.++++.|+.+
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            334444 44667899999999999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.17  E-value=1.1e-06  Score=80.46  Aligned_cols=146  Identities=12%  Similarity=0.118  Sum_probs=106.5

Q ss_pred             HHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHH-HhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhhhhh
Q 038906          124 FNKQVLKVFPY-PTTVTAFQFGCGSVMIILMW-TLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGT-VNVSFTHT  200 (276)
Q Consensus       124 ~nK~iL~~f~~-P~~Lt~~q~~v~~l~l~l~~-~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~-vsvs~~~~  200 (276)
                      .-..+.++.|- -..+|+.||++-+.--++.. .....| |+++.   |..+.+-..|.+.++++|+++++ +|++.+.+
T Consensus        21 ~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k-~kipl---k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiI   96 (330)
T KOG1583|consen   21 FLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVK-PKIPL---KDYAITVAMFFIVNVTNNYALKFNIPMPLHII   96 (330)
T ss_pred             HHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccC-CCCch---hhhheehheeeeeeeeccceeeecccceEEEE
Confidence            34555555442 25788899988665433221 111112 44443   44456666777889999999997 89999999


Q ss_pred             hccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc---cc--------------ccc--HHHHHHHHHHHHHH
Q 038906          201 IKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT---EA--------------SFN--WTGFCSAMASNVTN  261 (276)
Q Consensus       201 ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~---e~--------------~f~--~~G~l~alls~i~~  261 (276)
                      +|+..++-++++++++.|+|++.+++.+++.+++|+++++..   |.              ++.  ..|+.+..++.+..
T Consensus        97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s  176 (330)
T KOG1583|consen   97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS  176 (330)
T ss_pred             EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998742   11              111  36888888888888


Q ss_pred             HHHHHHHHhhcc
Q 038906          262 QSRNVFSKKFMV  273 (276)
Q Consensus       262 al~~V~~Kkll~  273 (276)
                      +.-.++++..-+
T Consensus       177 a~mgiyqE~~Y~  188 (330)
T KOG1583|consen  177 AYMGIYQETTYQ  188 (330)
T ss_pred             HHHHHHHHHHHH
Confidence            888888776544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.14  E-value=2.1e-06  Score=78.43  Aligned_cols=155  Identities=17%  Similarity=0.187  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHH-HHHHHHHHHHHHHHHHHHhcc
Q 038906          115 YLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVI-LPLAVADTLGNLLTNISLGTV  193 (276)
Q Consensus       115 ~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~-lplgl~~~~~~~l~n~al~~v  193 (276)
                      |++|..+.+..|...+   .|..+...|+++-.+..+.+.+..  +.+-+-++..|.+ +.=|+....+..+..+|++|.
T Consensus        47 ~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~--~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~m  121 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYY--MQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYM  121 (346)
T ss_pred             HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEE--eeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhc
Confidence            5555555555555433   377777767555444433322111  1111111111222 334556677888889999999


Q ss_pred             chhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc-----cc---------ccccHHHHHHHHHHHH
Q 038906          194 NVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL-----TE---------ASFNWTGFCSAMASNV  259 (276)
Q Consensus       194 svs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~-----~e---------~~f~~~G~l~alls~i  259 (276)
                      +.+=+.+|..++|+||.+++++++||+++....++.++...||++++-     |+         .+.+..|...++.+.+
T Consensus       122 slaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~l  201 (346)
T KOG4510|consen  122 SLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVL  201 (346)
T ss_pred             chhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHh
Confidence            999999999999999999999999999999999999999999999862     22         1345678777777777


Q ss_pred             HHHHHHHHHHhhccc
Q 038906          260 TNQSRNVFSKKFMVR  274 (276)
Q Consensus       260 ~~al~~V~~Kkll~~  274 (276)
                      .-+.-.|..+++-++
T Consensus       202 f~asvyIilR~iGk~  216 (346)
T KOG4510|consen  202 FGASVYIILRYIGKN  216 (346)
T ss_pred             hhhhHHHHHHHhhcc
Confidence            777766776666444

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.11  E-value=3.6e-05  Score=70.98  Aligned_cols=120  Identities=18%  Similarity=0.087  Sum_probs=84.1

Q ss_pred             HHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHHHH-hhhcCCCC---------CChHH-HHHHHHHHH-HHHHHHHHH
Q 038906          121 FNIFNKQVLK--VFPYPTTVTAFQFGCGSVMIILMWT-LNLYTRPK---------LTRSQ-FAVILPLAV-ADTLGNLLT  186 (276)
Q Consensus       121 ~~i~nK~iL~--~f~~P~~Lt~~q~~v~~l~l~l~~~-~~~~~~~~---------~s~~~-~~~~lplgl-~~~~~~~l~  186 (276)
                      .+++.|+..+  +++ |+.++..++..+.+++.+... ........         ..... +...+..++ ++...+.+.
T Consensus       160 ~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T TIGR00817       160 RNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVA  238 (302)
T ss_pred             HHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence            5567788877  565 888999999888766544322 11000000         00001 111222222 333344566


Q ss_pred             HHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          187 NISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       187 n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      +.++++++...+.++-.++|++++++++++++|+++..++++.++++.|+.+...
T Consensus       239 ~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999988764

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.07  E-value=0.00022  Score=65.85  Aligned_cols=153  Identities=16%  Similarity=0.195  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH-HhhhcCCC---CCChHHHHHHHHHHHHHHHHHHHHHHH
Q 038906          114 WYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMW-TLNLYTRP---KLTRSQFAVILPLAVADTLGNLLTNIS  189 (276)
Q Consensus       114 w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~-~~~~~~~~---~~s~~~~~~~lplgl~~~~~~~l~n~a  189 (276)
                      +..++. +-++.|.+ +..+ +..+..-|.+-+..++.+.. ..+..+.-   ..+++.+...+..+++-..+-....+|
T Consensus        16 y~lwG~-lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWA   92 (293)
T COG2962          16 YLLWGL-LPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWA   92 (293)
T ss_pred             HHHHHH-HHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhhee
Confidence            333443 34555554 4455 67777778777776554332 22221110   111223333333334444444555566


Q ss_pred             HhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 038906          190 LGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEASFNWTGFCSAMASNVTNQSRNVFSK  269 (276)
Q Consensus       190 l~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~f~~~G~l~alls~i~~al~~V~~K  269 (276)
                      ..+..+=-+.+=....|++.++++.+|+|||+++.+++++++..+||..-.....++.|..+.+    +++|++|...-|
T Consensus        93 vn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK  168 (293)
T COG2962          93 VNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRK  168 (293)
T ss_pred             cCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHH
Confidence            6554444444555779999999999999999999999999999999999887777788876654    578899988877


Q ss_pred             hhcc
Q 038906          270 KFMV  273 (276)
Q Consensus       270 kll~  273 (276)
                      ++--
T Consensus       169 ~~~v  172 (293)
T COG2962         169 KLKV  172 (293)
T ss_pred             hcCC
Confidence            6543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.01  E-value=2.9e-06  Score=74.62  Aligned_cols=108  Identities=19%  Similarity=0.241  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc--cc
Q 038906          168 QFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE--AS  245 (276)
Q Consensus       168 ~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e--~~  245 (276)
                      ..+...|.+++.++.+..+-.+++.++.+-+.-+-++.--|+.+++.+.+|+|+..-+.++.++.+.|+++..+.|  ..
T Consensus        52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence            3466789999999999999999999999999999999999999999999999999999999999999999988654  45


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 038906          246 FNWTGFCSAMASNVTNQSRNVFSKKFMVRK  275 (276)
Q Consensus       246 f~~~G~l~alls~i~~al~~V~~Kkll~~k  275 (276)
                      ..+.|+.+++.|++..++|.+..|++..+.
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA  161 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNA  161 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            679999999999999999999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.94  E-value=0.00032  Score=64.77  Aligned_cols=69  Identities=17%  Similarity=0.170  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .+..++....++.+.+.++++.+.+.+..+...+|++.+++++++++|+++..++.+.++++.|+.+..
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            344555566789999999999999999999999999999999999999999999999999988877764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.92  E-value=0.00064  Score=55.89  Aligned_cols=125  Identities=16%  Similarity=0.154  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHhhc------CCchHHHHHHHHHHHHHHHHHHHHh-hhcCC------C---CC--ChHHHHHHHHHHH
Q 038906          116 LLNIYFNIFNKQVLKV------FPYPTTVTAFQFGCGSVMIILMWTL-NLYTR------P---KL--TRSQFAVILPLAV  177 (276)
Q Consensus       116 ~~s~~~~i~nK~iL~~------f~~P~~Lt~~q~~v~~l~l~l~~~~-~~~~~------~---~~--s~~~~~~~lplgl  177 (276)
                      .+....+++.|+.+++      -..|+.+....-..+.+++.+.+.. ...+.      .   +.  +.+.+..++..++
T Consensus        10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (153)
T PF03151_consen   10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL   89 (153)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence            4455566777888775      2237777666555565555443322 11110      0   00  1233455556667


Q ss_pred             HHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          178 ADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       178 ~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      +....+..+...+++++.-.++++.....+++.+++.++++|+++..+++++++.+.|+.+-.
T Consensus        90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            777889999999999999999999999999999999999999999999999999999987643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.85  E-value=0.001  Score=59.38  Aligned_cols=118  Identities=25%  Similarity=0.351  Sum_probs=86.5

Q ss_pred             HHHHHHHHhhcCCchHHHHH-HHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHhccchhhh
Q 038906          121 FNIFNKQVLKVFPYPTTVTA-FQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADT-LGNLLTNISLGTVNVSFT  198 (276)
Q Consensus       121 ~~i~nK~iL~~f~~P~~Lt~-~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~-~~~~l~n~al~~vsvs~~  198 (276)
                      .+..+|++. +.+ +..... .++. ............... ...+...+.....++++.. .++.+.+.+++..+++..
T Consensus       169 ~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~  244 (292)
T COG0697         169 YTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV  244 (292)
T ss_pred             HHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence            456777776 433 555555 5554 222222221111111 2345567777888888765 589999999999999999


Q ss_pred             hhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc
Q 038906          199 HTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT  242 (276)
Q Consensus       199 ~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~  242 (276)
                      .++..++|++.+++++++++|+++..++++.++++.|+.+....
T Consensus       245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999887643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.77  E-value=0.00061  Score=63.02  Aligned_cols=130  Identities=17%  Similarity=0.160  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH---HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH
Q 038906          102 IQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFG---CGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVA  178 (276)
Q Consensus       102 ~~~l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~---v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~  178 (276)
                      ++-+..+....+-|..   +...+|..  .++ |...++.|+.   ++..+.....  + +.+|. ..+.....+..|++
T Consensus       151 ~~Gi~~~l~sg~~y~~---~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~~~~~-~~~~~~~~~~~Gi~  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLV---YVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-LAKPL-KKYAILLNILPGLM  220 (290)
T ss_pred             hhHHHHHHHHHHHHHH---HHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-cccch-HHHHHHHHHHHHHH
Confidence            3344445455554443   33566754  344 7777655544   2332222211  1 11222 23333334448888


Q ss_pred             HHHHHHHHHHHHh-ccchhhhhhhccchHHHHHHHHHHHhcccCChhhH----HHHHHHHHhhhhhcc
Q 038906          179 DTLGNLLTNISLG-TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLV----PSLVPIVGGVALASL  241 (276)
Q Consensus       179 ~~~~~~l~n~al~-~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~----lsl~liv~GV~La~~  241 (276)
                      +..++.+...+.+ +++++.+.++-+.+|+...+.+.++++|+.+++++    ++.++++.|+.+...
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            8888999999999 99999999999999999999999999999999999    999999999988653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.60  E-value=0.0021  Score=61.12  Aligned_cols=121  Identities=15%  Similarity=0.098  Sum_probs=79.3

Q ss_pred             HHHHHHHHHhhcCC-----c-hHHHHHHHHHHHHHHHHHHHH-hhhcC-C-------CCCChHHHH----HHHHHHHHHH
Q 038906          120 YFNIFNKQVLKVFP-----Y-PTTVTAFQFGCGSVMIILMWT-LNLYT-R-------PKLTRSQFA----VILPLAVADT  180 (276)
Q Consensus       120 ~~~i~nK~iL~~f~-----~-P~~Lt~~q~~v~~l~l~l~~~-~~~~~-~-------~~~s~~~~~----~~lplgl~~~  180 (276)
                      ..+++.|..+++.+     + +..+..++..++.++++.... ....+ .       ...+...+.    .++.-++++.
T Consensus       208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~  287 (350)
T PTZ00343        208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY  287 (350)
T ss_pred             HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence            35677888876532     2 444555566677665544322 11000 0       001110111    1222233344


Q ss_pred             HHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          181 LGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       181 ~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      +.+.+..+++++++...+.+.-.+.|+++.+++.++++|+++..+++|.+++++|+.+..
T Consensus       288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            444445579999999999999999999999999999999999999999999999998754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.48  E-value=0.00063  Score=56.01  Aligned_cols=71  Identities=20%  Similarity=0.127  Sum_probs=61.3

Q ss_pred             HHHHHH-HHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHH--HhcccCChhhHHHHHHHHHhhhhhccc
Q 038906          172 ILPLAV-ADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAAL--FLREKPTIWLVPSLVPIVGGVALASLT  242 (276)
Q Consensus       172 ~lplgl-~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l--~l~er~s~~~~lsl~liv~GV~La~~~  242 (276)
                      .+.+|+ ++.++..+-+++++++|++.+.-+-+..++++.+.+..  +++|++++.++++++++++|+.+...+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            345665 47788899999999999999998888888888888875  899999999999999999999997643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.29  E-value=0.0035  Score=51.06  Aligned_cols=70  Identities=16%  Similarity=0.373  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhh-ccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTI-KAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~i-ka~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      .+..-+++..+..+-..+++++|++.+.-+ ...--+.+++.+.++++|++++.+++++.+++.|+.+.-.
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            344555678888899999999999998777 4688899999999999999999999999999999988754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.18  E-value=0.0085  Score=55.25  Aligned_cols=112  Identities=24%  Similarity=0.234  Sum_probs=90.4

Q ss_pred             CCCCCCh--HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccCChhhHH----HHHHH
Q 038906          160 TRPKLTR--SQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKPTIWLVP----SLVPI  232 (276)
Q Consensus       160 ~~~~~s~--~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~s~~~~l----sl~li  232 (276)
                      .+|..+.  +.+..-+.-|+++.++......|++++.+|.+.=+- .+.-+.+.+.++++++|..+...++    +++++
T Consensus        34 ~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~li  113 (269)
T PF06800_consen   34 RQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLI  113 (269)
T ss_pred             hCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH
Confidence            4556653  666677788899999999999999999988876554 5667779999999999998877654    89999


Q ss_pred             HHhhhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhh
Q 038906          233 VGGVALASLTEAS--------FNWTGFCSAMASNVTNQSRNVFSKKF  271 (276)
Q Consensus       233 v~GV~La~~~e~~--------f~~~G~l~alls~i~~al~~V~~Kkl  271 (276)
                      ++|+.+.+..|.+        ....|+...+++.+.|..|.++-|-.
T Consensus       114 iiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~  160 (269)
T PF06800_consen  114 IIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF  160 (269)
T ss_pred             HHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999875422        12569999999999999999987753

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.18  E-value=0.0058  Score=48.98  Aligned_cols=68  Identities=13%  Similarity=0.134  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          174 PLAVADTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       174 plgl~~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      ..-+++..+..+-..+++++|++.+.-+- ...-+.+++.+.++++|++++.+++++.+++.|+++.-.
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33445777778888899999999988774 468888999999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.04  E-value=0.011  Score=47.07  Aligned_cols=69  Identities=14%  Similarity=0.089  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .+..-+++..+..+-..+++++|++.+.-+= ..--+.+++.+.+++||+.++.+++++.+++.|++..-
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3444556778888888999999999876554 47778899999999999999999999999999998764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.99  E-value=0.018  Score=46.19  Aligned_cols=68  Identities=9%  Similarity=-0.019  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhh
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALA  239 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La  239 (276)
                      .+..-+++..+..+-..+++++|++.+.-+= ..--+.+++.+.++++|++++.+++++.+++.|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3444556777888888999999999875443 4667788999999999999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.98  E-value=0.018  Score=53.33  Aligned_cols=132  Identities=12%  Similarity=0.261  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHH-HH--hhhcCC-CC---CChHHHHHHHHHHHHHHH
Q 038906          110 MFGLWYLLNIYFNIFNKQVLKVFP-YPTTVTAFQFGCGSVMIILM-WT--LNLYTR-PK---LTRSQFAVILPLAVADTL  181 (276)
Q Consensus       110 ~~~~w~~~s~~~~i~nK~iL~~f~-~P~~Lt~~q~~v~~l~l~l~-~~--~~~~~~-~~---~s~~~~~~~lplgl~~~~  181 (276)
                      ++.+...+......++|+++++++ .|..+.+...+++.++..+. +.  .+.... .+   ..++.+..++..+++...
T Consensus       158 ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~  237 (303)
T PF08449_consen  158 LLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGAL  237 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            334445666667789999998653 36666666666666554332 22  111110 00   112345566677777777


Q ss_pred             HHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          182 GNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       182 ~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      +..+-+...+..+.-...++..+--+++++++.+++++++++..|.|+++++.|..+-..
T Consensus       238 g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  238 GQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            777777778888888888999999999999999999999999999999999999887654

; GO: 0055085 transmembrane transport

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.86  E-value=0.053  Score=51.59  Aligned_cols=140  Identities=14%  Similarity=0.122  Sum_probs=86.5

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH-HHhhhcCCCCC--ChHHHHHHHH
Q 038906           98 PSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILM-WTLNLYTRPKL--TRSQFAVILP  174 (276)
Q Consensus        98 ~~~~~~~l~~~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~-~~~~~~~~~~~--s~~~~~~~lp  174 (276)
                      +.+....+..+..+.+|-..    +.+.|+.+++.+ +..+...--+++.++..+. ..+...+-.+.  +.+.+...+.
T Consensus       164 ~~~i~GDll~l~~a~lya~~----nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~  238 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVS----NVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVG  238 (334)
T ss_pred             CccchhHHHHHHHHHHHHHH----HHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHH
Confidence            34555566666566665443    466788888766 3333222223344433221 11211111122  3333332233


Q ss_pred             HHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccc
Q 038906          175 LAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLT  242 (276)
Q Consensus       175 lgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~  242 (276)
                      .+++....+.+....+++.++.+..+--.++.++.+++..+++++++++.-+++.+++++|+++....
T Consensus       239 ~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  239 YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            33333334445567788888888878778899999999999999999999999999999999998754

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.71  E-value=0.0034  Score=55.39  Aligned_cols=84  Identities=15%  Similarity=0.141  Sum_probs=70.3

Q ss_pred             cchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhccccc---------------------------c
Q 038906          193 VNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEA---------------------------S  245 (276)
Q Consensus       193 vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~---------------------------~  245 (276)
                      ++++.....|+..++++++....+.++|++..++++.++++.|+.....++.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            6788888999999999999999999999999999999999999885322110                           1


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 038906          246 FNWTGFCSAMASNVTNQSRNVFSKKFMVRKE  276 (276)
Q Consensus       246 f~~~G~l~alls~i~~al~~V~~Kkll~~k~  276 (276)
                      ..+.|....+.+.++.++..++.++.++++|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~  112 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD  112 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC
Confidence            2477888899999999999999999888764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=96.67  E-value=5.1e-05  Score=69.14  Aligned_cols=156  Identities=13%  Similarity=0.139  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 038906          116 LLNIYFNIFNKQVLKV-FPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAVADTLGNLLTNISLGTVN  194 (276)
Q Consensus       116 ~~s~~~~i~nK~iL~~-f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vs  194 (276)
                      .+...+++.+.++-.. .+-|..-+++-...=+++.-.+..+   ++ +.-+..|+..+.+|+.-.-++.+--.|+||.+
T Consensus        28 L~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~f---R~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyTs  103 (336)
T KOG2766|consen   28 LLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLF---RR-KYIKAKWRHYILLAFVDVEANYFVVKAYQYTS  103 (336)
T ss_pred             HHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHh---hh-HHHHHHHHHhhheeEEeecccEEEeeehhhcc
Confidence            3444456667777665 6678777666443322221111112   22 22234456677888877777777778999999


Q ss_pred             hhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccccc--------ccHHHHHHHHHHHHHHHHHHH
Q 038906          195 VSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTEAS--------FNWTGFCSAMASNVTNQSRNV  266 (276)
Q Consensus       195 vs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e~~--------f~~~G~l~alls~i~~al~~V  266 (276)
                      ..-.+.+-.-..+.+++++++|++.|+.+.+..++++.+.||.+.+..|..        -...|.+++++++-+|+.-|+
T Consensus       104 mtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv  183 (336)
T KOG2766|consen  104 MTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNV  183 (336)
T ss_pred             hHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccc
Confidence            998999999999999999999999999999999999999999998765421        125677777777777777777


Q ss_pred             HHHhhcccC
Q 038906          267 FSKKFMVRK  275 (276)
Q Consensus       267 ~~Kkll~~k  275 (276)
                      ..+.+.++.
T Consensus       184 ~EEflvkn~  192 (336)
T KOG2766|consen  184 SEEFLVKNA  192 (336)
T ss_pred             cHHHHHhcC
Confidence            666655543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.63  E-value=0.065  Score=49.11  Aligned_cols=113  Identities=18%  Similarity=0.218  Sum_probs=76.2

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCC-CChHHHHHHHHHHHHH-HHHHHHHHHHHhccchhhhhh
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPK-LTRSQFAVILPLAVAD-TLGNLLTNISLGTVNVSFTHT  200 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~-~s~~~~~~~lplgl~~-~~~~~l~n~al~~vsvs~~~~  200 (276)
                      +..|.+=+.-|-+..+ .+-+++++++.+..-...  ..+. .+++.+..-+.++++- .+-+.+...++...|.....+
T Consensus       165 v~G~r~g~~~~g~~g~-a~gm~vAaviv~Pig~~~--ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~  241 (292)
T COG5006         165 VLGQRAGRAEHGTAGV-AVGMLVAALIVLPIGAAQ--AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGT  241 (292)
T ss_pred             HHcchhcccCCCchHH-HHHHHHHHHHHhhhhhhh--cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHH
Confidence            4445554333333333 345666655443321111  1111 2333344444555553 345889999999999999999


Q ss_pred             hccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhh
Q 038906          201 IKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       201 ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      +-+++|.+.++...++++|.++..+|++++.++.+.+=
T Consensus       242 LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         242 LLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999887663

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.51  E-value=0.013  Score=46.65  Aligned_cols=69  Identities=19%  Similarity=0.171  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhh-hccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHT-IKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~-ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .+..-+++..+..+-..+++++|++.+-- --..-.+.+++.++++++|+.+..+++++.+++.|++..-
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            34455567778888889999999998643 3456677789999999999999999999999999998764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.33  E-value=0.032  Score=43.11  Aligned_cols=55  Identities=13%  Similarity=0.124  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHHHhccchhhhhhh-ccchHHHHHHHHHHHhcccCChhhHHHHHHH
Q 038906          178 ADTLGNLLTNISLGTVNVSFTHTI-KAMEPFFTVLFAALFLREKPTIWLVPSLVPI  232 (276)
Q Consensus       178 ~~~~~~~l~n~al~~vsvs~~~~i-ka~~Pvftvils~l~l~er~s~~~~lsl~li  232 (276)
                      ++..+..+-..+++++|++.+.-+ .....+.+.+.+.++++|+++..+++++.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            678888899999999999998654 5689999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.25  E-value=0.24  Score=46.15  Aligned_cols=128  Identities=16%  Similarity=0.075  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH-HhhhcCC-CC-CChHHHHHHHHHHHHHHHHHHHHHH
Q 038906          112 GLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMW-TLNLYTR-PK-LTRSQFAVILPLAVADTLGNLLTNI  188 (276)
Q Consensus       112 ~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~-~~~~~~~-~~-~s~~~~~~~lplgl~~~~~~~l~n~  188 (276)
                      .++.+.+...+...|+.+.. + +.+=.+++++.-...++... ....... .. -+...+..+...|+..+.-..+...
T Consensus       153 al~la~sf~~Ygl~RK~~~v-~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~  230 (293)
T COG2962         153 ALALALSFGLYGLLRKKLKV-D-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-c-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHH
Confidence            34445555555555555442 2 33333345555443332221 1111110 00 1234555666777788888899999


Q ss_pred             HHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          189 SLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       189 al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      |-+.+|.+...++.+.+|....+++.++++|.++..++.+.+++-.|+++.+.
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.88  E-value=0.25  Score=45.67  Aligned_cols=72  Identities=22%  Similarity=0.218  Sum_probs=58.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhH----HHHHHHHHhhh
Q 038906          165 TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLV----PSLVPIVGGVA  237 (276)
Q Consensus       165 s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~----lsl~liv~GV~  237 (276)
                      .++.++ -+.-|+++..++.+...|.+.+.++..-.+..+..+...+.+.+++||+=+++++    +++++++.|.+
T Consensus       192 ~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  192 EKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             ccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            344444 4578899999999999999999999999999999999999999999999887765    34444555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=95.82  E-value=0.081  Score=46.56  Aligned_cols=67  Identities=9%  Similarity=0.060  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhh
Q 038906          172 ILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       172 ~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      ...+.++.+.+..+.++.++|.+.....++-.+.++++.+++.++++|+++...+++..++..|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3444556777777888899999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.74  E-value=0.019  Score=46.35  Aligned_cols=71  Identities=25%  Similarity=0.324  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh-ccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          169 FAVILPLAVADTLGNLLTNISLGTVNVSFTHTI-KAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       169 ~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~i-ka~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      ++..+|..+ +-.+.+..++.+...++|.+.-+ .+++=+||++.++++++|..++++++++.+++.|+.+++
T Consensus        42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv  113 (113)
T PF10639_consen   42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALCV  113 (113)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence            345566654 44456666778999999999877 599999999999999999999999999999999998753

Many members are annotated as potential transmembrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.61  E-value=0.021  Score=53.43  Aligned_cols=68  Identities=25%  Similarity=0.315  Sum_probs=61.7

Q ss_pred             HHHHHH-HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          173 LPLAVA-DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       173 lplgl~-~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      ...|+. +..+.+++..|+.+.|.+..+-+-+..-++.++++..+++||+++..+.+.+++++|+.+..
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            445554 67788899999999999999999999999999999999999999999999999999998765

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=93.81  E-value=2.8  Score=34.72  Aligned_cols=115  Identities=16%  Similarity=0.205  Sum_probs=73.6

Q ss_pred             HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Q 038906          123 IFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYT-RPKLTRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTI  201 (276)
Q Consensus       123 i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~-~~~~s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~i  201 (276)
                      .+|-.+-+....|+.-+++-+.++.+.+.+.+.....+ ..+.....|..+ .=|++-.....+.+++...+.++.+..+
T Consensus        18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~-lGG~lG~~~V~~~~~~vp~lG~~~~~~l   96 (138)
T PF04657_consen   18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAY-LGGLLGVFFVLSNIILVPRLGAALTTIL   96 (138)
T ss_pred             HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHh-ccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            34444444444599899998899888765554432221 111112223322 2555666667777888888888877665


Q ss_pred             c-cchHHHHHHHHHH----HhcccCChhhHHHHHHHHHhhhh
Q 038906          202 K-AMEPFFTVLFAAL----FLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       202 k-a~~Pvftvils~l----~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      - ...-+..+++..+    .-++++++.+.+++.+++.|+.+
T Consensus        97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5 4455555666664    34788999999999999999864

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.54  E-value=0.94  Score=42.58  Aligned_cols=126  Identities=15%  Similarity=0.211  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH-HHHHHhhhcC----CC-----CCChHHHHHHHHHHH
Q 038906          108 GGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMI-ILMWTLNLYT----RP-----KLTRSQFAVILPLAV  177 (276)
Q Consensus       108 ~~~~~~w~~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l-~l~~~~~~~~----~~-----~~s~~~~~~~lplgl  177 (276)
                      ..++..+.++-..++...+.+++++.    ++.+|+.++.-+. .+.+......    .+     +..++.++-++.++.
T Consensus       174 ~~Ll~~~L~fDgfTn~tQd~lf~~~k----~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  174 ILLLFGYLLFDGFTNATQDSLFKKYK----VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             HHHHHHHHHHHhhHHhHHHHHhccCC----ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            34556666667778889999999776    6667776655322 2222211111    01     223567788899999


Q ss_pred             HHHHHHHHHHHHHh-ccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhh
Q 038906          178 ADTLGNLLTNISLG-TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       178 ~~~~~~~l~n~al~-~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      +.+.|..+-.+.++ +.|+.++ +|..+==++..+++.+.++.+.+..+|.+.+++..|..+
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t-~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFT-TIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHH-HHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            98888666655554 4566665 666777889999999999999999999998888777665

>PRK13499 rhamnose-proton symporter; Provisional

Probab=93.31  E-value=3  Score=39.92  Aligned_cols=102  Identities=14%  Similarity=0.176  Sum_probs=80.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccC---C----hhhHHHHHHHHHhh
Q 038906          165 TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKP---T----IWLVPSLVPIVGGV  236 (276)
Q Consensus       165 s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~---s----~~~~lsl~liv~GV  236 (276)
                      +.+.+...+.-|++...++.+...+++++.+|.+.-|- .+.-++..++..++++|-.   +    ....++++++++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            45566667778888999999999999999999886444 6677888888888888654   2    33578889999999


Q ss_pred             hhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 038906          237 ALASL----TEA--------SFN-WTGFCSAMASNVTNQSRNV  266 (276)
Q Consensus       237 ~La~~----~e~--------~f~-~~G~l~alls~i~~al~~V  266 (276)
                      ++...    .|.        ++| -.|+++++++.+.++.++.
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            99886    332        133 6899999999999999994

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=92.92  E-value=0.15  Score=47.21  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=63.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhh
Q 038906          165 TRSQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALA  239 (276)
Q Consensus       165 s~~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La  239 (276)
                      .++++....-+|++..++.++-.+++|.=-++-..+++.+.-+|..+...+|+++.+++.+|.+.++++.-.+.+
T Consensus       249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            456666777899998899999999999877777889999999999999999999999999998877766555444

>TIGR00688 rarD rarD protein

Probab=92.70  E-value=3.5  Score=36.75  Aligned_cols=50  Identities=8%  Similarity=0.149  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHH
Q 038906          167 SQFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALF  216 (276)
Q Consensus       167 ~~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~  216 (276)
                      ++|..++.++++...++.+.+.++++++++...+.-+++|++.++++.++
T Consensus       206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            46777778888777889999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=91.53  E-value=9.7  Score=36.49  Aligned_cols=69  Identities=13%  Similarity=0.095  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhhhhh---hc-cchHHHHHHHHHHHhcccCC------hhhHHHHHHHHHhhhhhccc
Q 038906          173 LPLAVADTLGNLLTNISLGTVNVSFTHT---IK-AMEPFFTVLFAALFLREKPT------IWLVPSLVPIVGGVALASLT  242 (276)
Q Consensus       173 lplgl~~~~~~~l~n~al~~vsvs~~~~---ik-a~~Pvftvils~l~l~er~s------~~~~lsl~liv~GV~La~~~  242 (276)
                      +.-|+....++.+..++-..++++..-+   +. ++.-++..+... ++||+=+      ...+++++++++|..+...+
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            5566678888888888888886665555   66 444455555554 6888866      55577888888888877654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.32  E-value=1.6  Score=41.21  Aligned_cols=126  Identities=15%  Similarity=0.114  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHhh----cCCchHHHHHHHHHHHHHHHH-HHHHhhhcCCC------CCChHHHHHHHHHHHHHHH
Q 038906          113 LWYLLNIYFNIFNKQVLK----VFPYPTTVTAFQFGCGSVMII-LMWTLNLYTRP------KLTRSQFAVILPLAVADTL  181 (276)
Q Consensus       113 ~w~~~s~~~~i~nK~iL~----~f~~P~~Lt~~q~~v~~l~l~-l~~~~~~~~~~------~~s~~~~~~~lplgl~~~~  181 (276)
                      .+.+....-+++.|.++.    +.+ ++.+...+--++...++ ..+.....+..      ..+.. ....+..+++..+
T Consensus       170 ~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~  247 (316)
T KOG1441|consen  170 ISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFL  247 (316)
T ss_pred             HHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHH
Confidence            334445556788888885    255 77676555555555444 32222111000      11111 2334445566677


Q ss_pred             HHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhc
Q 038906          182 GNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALAS  240 (276)
Q Consensus       182 ~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~  240 (276)
                      .+....+.+..++.=.+++...+.-+++++.++++++++.++...++.++.++|+.+..
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            77888888999998888898888888899999999999999999999999999998865

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.14  E-value=0.22  Score=47.04  Aligned_cols=69  Identities=16%  Similarity=0.204  Sum_probs=62.0

Q ss_pred             HHHHHH-HHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          173 LPLAVA-DTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       173 lplgl~-~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      ...|++ +..|-..+..|+.+.|.++.+=+-+++-++.++++..+++|+.+..-.++.+++++|-.+.+.
T Consensus        67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            345655 677888999999999999999999999999999999999999999999999999999888764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=87.23  E-value=20  Score=32.34  Aligned_cols=115  Identities=12%  Similarity=0.132  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH-HHHHHhhhcCCCC-CC-hHHH-HHHHHHHHHHHHHHHHHHHHHh
Q 038906          116 LLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMI-ILMWTLNLYTRPK-LT-RSQF-AVILPLAVADTLGNLLTNISLG  191 (276)
Q Consensus       116 ~~s~~~~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l-~l~~~~~~~~~~~-~s-~~~~-~~~lplgl~~~~~~~l~n~al~  191 (276)
                      .+|..-.+++.++++.-+.|+.+--+|+.+..+++ .+........... .. .+.+ .....+-+.++.+-++...-++
T Consensus       124 ~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~K  203 (244)
T PF04142_consen  124 FLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLK  203 (244)
T ss_pred             HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHH
Confidence            45555678899999977667777778877655443 3332221111111 00 1111 1123344457777777778899


Q ss_pred             ccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHH
Q 038906          192 TVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLV  230 (276)
Q Consensus       192 ~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~  230 (276)
                      |.+.=.-....+.+-+.+.+++.++++.+++..-.++..
T Consensus       204 yadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  204 YADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            987666677778999999999999999999988876643

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.42  E-value=3.5  Score=37.80  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhh
Q 038906          168 QFAVILPLAVADTLGNLLTNISLGTVNVSFTHTIKAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVAL  238 (276)
Q Consensus       168 ~~~~~lplgl~~~~~~~l~n~al~~vsvs~~~~ika~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~L  238 (276)
                      .+..+..++++.++|..+-.....+...-.-.++..+--+|+++.+.++++..++.++|++.+++..|...
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            46677788888888888877777665555555777778899999999999999999999999999888665

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=82.79  E-value=16  Score=29.20  Aligned_cols=95  Identities=14%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHhhhcCCCCCC-hHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhhhhc-cchHHHHHHHHHHHhcccC
Q 038906          145 CGSVMIILMWTLNLYTRPKLT-RSQFAVILPLAVA-DTLGNLLTNISLGTVNVSFTHTIK-AMEPFFTVLFAALFLREKP  221 (276)
Q Consensus       145 v~~l~l~l~~~~~~~~~~~~s-~~~~~~~lplgl~-~~~~~~l~n~al~~vsvs~~~~ik-a~~Pvftvils~l~l~er~  221 (276)
                      ++-+++.+.|..+++.+...+ +..+..--.++++ |++..-.+-.+.+..+.+---++. ..+-..-+.++.+++||++
T Consensus         9 ~SN~FMTfAWYGHLK~~~~~pl~~ail~SWgIAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l   88 (108)
T PF04342_consen    9 LSNIFMTFAWYGHLKFKSSKPLWIAILISWGIAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPL   88 (108)
T ss_pred             HHHHHHHHHHHHHhhccccCcHHHHHHHHHHHHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCc
Confidence            344556677765553322111 1111112234444 555555555555553333221222 2222233456778899999


Q ss_pred             ChhhHHHHHHHHHhhhhh
Q 038906          222 TIWLVPSLVPIVGGVALA  239 (276)
Q Consensus       222 s~~~~lsl~liv~GV~La  239 (276)
                      ++....+.+.++++|.++
T Consensus        89 ~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   89 KWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             cHHHHHHHHHHHHhhhee
Confidence            999999999988887654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.34  E-value=35  Score=28.90  Aligned_cols=114  Identities=12%  Similarity=0.204  Sum_probs=64.2

Q ss_pred             HHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC---hHHHHHHH--HHHHHHHHHHHHHHHHHhccchh
Q 038906          122 NIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLT---RSQFAVIL--PLAVADTLGNLLTNISLGTVNVS  196 (276)
Q Consensus       122 ~i~nK~iL~~f~~P~~Lt~~q~~v~~l~l~l~~~~~~~~~~~~s---~~~~~~~l--plgl~~~~~~~l~n~al~~vsvs  196 (276)
                      +-.|-.+-.....|..-.++-+.+++.++.+.... ..+++...   +..|..+.  .+|.+|.+...   .....+.+.
T Consensus        21 ~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~---~l~p~lGa~   96 (150)
T COG3238          21 AAINGRLARYLGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWAWIGGLLGAIFVTSSI---LLAPRLGAA   96 (150)
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHHHHccchhhhhhhhhH---HhccchhHH
Confidence            34555555555669999999999988776554444 33444333   12333322  34444433332   333444443


Q ss_pred             hhh-hhccchHHHHHHHHHHHh----cccCChhhHHHHHHHHHhhhhh
Q 038906          197 FTH-TIKAMEPFFTVLFAALFL----REKPTIWLVPSLVPIVGGVALA  239 (276)
Q Consensus       197 ~~~-~ika~~Pvftvils~l~l----~er~s~~~~lsl~liv~GV~La  239 (276)
                      .++ .+-+..-+.-+++..+=.    +++++..++++++++++|+.++
T Consensus        97 ~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          97 TTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            333 333444444455543322    4779999999999999996554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-12

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.4 bits (161), Expect = 2e-12
 Identities = 42/248 (16%), Positives = 66/248 (26%), Gaps = 76/248 (30%)

Query: 14  PILKRRFCLILSSSSLEPADLAFSRGV-----SCL--QTSRFGSFTPRDGNGVGW----- 61
           P LK R  L      L PA      GV     + +            +    + W     
Sbjct: 136 PYLKLRQAL----LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 62  SARISSSLKCLNQRYNNLKTRAGTASVPDSVDETPEPSAAIQTLQLGGMFGLW-Y---LL 117
                + L+ L +    +       S  D          +IQ  +L  +     Y   LL
Sbjct: 192 CNSPETVLEMLQKLLYQID--PNWTSRSDHSSNIKLRIHSIQA-ELRRLLKSKPYENCLL 248

Query: 118 NIYFNIFNKQVLKVFPYPTTVTAFQFGCGSVMIILMWTLNLYTRPKLTRSQFAVILPLAV 177
            +  N+ N +            AF   C     IL+           TR +        V
Sbjct: 249 -VLLNVQNAKAWN---------AFNLSCK----ILL----------TTRFK-------QV 277

Query: 178 ADTLGNLLT-NISLGTVNVSFTHT--------------------IKAMEPFFTVLFAALF 216
            D L    T +ISL   +++ T                      +    P    + A   
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES- 336

Query: 217 LREKPTIW 224
           +R+    W
Sbjct: 337 IRDGLATW 344

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.36
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.24

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.36  E-value=4.2e-06  Score=65.68  Aligned_cols=70  Identities=13%  Similarity=0.147  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccchhhhhhh-ccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcccc
Q 038906          174 PLAVADTLGNLLTNISLGTVNVSFTHTI-KAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASLTE  243 (276)
Q Consensus       174 plgl~~~~~~~l~n~al~~vsvs~~~~i-ka~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~~e  243 (276)
                      ...+++..+..+.+.+++++|++.+..+ .++.|+++++++.++++|++++.+++++++++.|+.+....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3334578888899999999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.24  E-value=3.5e-06  Score=68.88  Aligned_cols=66  Identities=14%  Similarity=0.176  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHHhccchhhhhhh-ccchHHHHHHHHHHHhcccCChhhHHHHHHHHHhhhhhcc
Q 038906          176 AVADTLGNLLTNISLGTVNVSFTHTI-KAMEPFFTVLFAALFLREKPTIWLVPSLVPIVGGVALASL  241 (276)
Q Consensus       176 gl~~~~~~~l~n~al~~vsvs~~~~i-ka~~Pvftvils~l~l~er~s~~~~lsl~liv~GV~La~~  241 (276)
                      .+++.++..+.+.+++++|++.+..+ .++.|+++++++.++++|++++.++++++++++|+++...
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34578889999999999999999888 8999999999999999999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00