Citrus Sinensis ID: 039079

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MENIANTTSRNDRLNNNMKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQPQVSKVLG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHcccccccHHHHHHHcccccccccccccccccccHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHcccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHccccHHHHHHHHcccccccccccccccEEEcccHHHHcc
Coil and Loop (DISEMBL)
menianttsrndrlnnnmkpgyDLATRLEASGGITKCWNSLMELKSCSNEIGIfflnsqadidhdcCRAIDIIArncwpamltslgftaeegnilrgycdassvpslgglvviyqpqvskvlg
Flexible Loop (DISEMBL)
menianttsrndrlnnnmKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPslgglvviyqpqvskvlg
Low Complexity Region (SEG)
MENIANTTSRNDRLNNNMKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQPQVSKVLG
Disordered region (IsUnstruct)
*********************YDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQP*******
Disordered Region (DISOPRED)
**********************************TKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGY*****************PQVSKVL*
Disordered Region (DISEMBL)
*********RNDRLNNNMKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQPQVSKVLG
Disordered Region (DISPRO)
****************N***GYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQPQVSKVLG
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENIANTTSRNDRLNNNMKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQPQVSKVLG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.674	0.653	0.566	1e-24
Q9SJ23	125	Egg cell-secreted protein	no	no	0.674	0.664	0.540	4e-23
Q9SJ24	125	Egg cell-secreted protein	no	no	0.634	0.624	0.556	6e-23
Q9SRD8	158	Egg cell-secreted protein	no	no	0.666	0.518	0.487	1e-18
Q9FGG1	155	Egg cell-secreted protein	no	no	0.626	0.496	0.447	2e-15

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL+ SGG+ +CWN+L ELKSC+NEI +FFLN +  +   CC ++DII  NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 83  TSLGFTAEEGNILRGYC------DASSVPS 106
           TSLGFT EE N+LRG+C      D+S  PS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL   GG+ +CW++L ELKSC+NEI +FFLN +  + + CC A+D+I  +CWPAML
Sbjct: 33  NIAARLTG-GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91

Query: 83  TSLGFTAEEGNILRGYCDASSVPSLGG 109
           TSLGFT EE N+LRG+C +   P+ GG
Sbjct: 92  TSLGFTLEETNVLRGFCQS---PNSGG 115

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 63/79 (79%), Gaps = 1/79 (1%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL   GG+ +CWN+L ELKSC+NEI +FFLN +  +  DCC+A+++I  +CWPAML
Sbjct: 33  NIAARLNG-GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91

Query: 83  TSLGFTAEEGNILRGYCDA 101
           TSLGFT++E N+LRG+C +
Sbjct: 92  TSLGFTSDETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 52/82 (63%)

Query: 20  PGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWP 79
           P   L  RL+       CW+SLM+L+ CS E+ +FFLN +  I   CC AI  I R CWP
Sbjct: 40  PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99

Query: 80  AMLTSLGFTAEEGNILRGYCDA 101
            M+  LGFTA+EG++L+GYCD 
Sbjct: 100 TMIGVLGFTAQEGDMLQGYCDG 121

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 8/85 (9%)

Query: 24  LATRLEASGGITKCWNSLMELKSCSNEIGIFFLNS--------QADIDHDCCRAIDIIAR 75
           +AT    +G +  CWN+ +ELKSC++EI  FFL+         +  ID DCC AI ++ +
Sbjct: 40  MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query: 76  NCWPAMLTSLGFTAEEGNILRGYCD 100
           +CW  M TSLG T  EGN LR YC+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
296082551	135	unnamed protein product [Vitis vinifera]	0.772	0.703	0.697	6e-32
359482498	128	PREDICTED: uncharacterized protein LOC10	0.886	0.851	0.589	8e-32
224060465	146	predicted protein [Populus trichocarpa]	0.894	0.753	0.539	2e-28
255578404	136	conserved hypothetical protein [Ricinus	0.699	0.632	0.625	7e-25
15235039	127	uncharacterized protein [Arabidopsis tha	0.674	0.653	0.566	5e-23
116830619	128	unknown [Arabidopsis thaliana]	0.674	0.648	0.566	5e-23
255578398	135	conserved hypothetical protein [Ricinus	0.666	0.607	0.597	9e-23
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.626	0.606	0.615	1e-22
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.674	0.664	0.540	1e-21
15227093	125	uncharacterized protein [Arabidopsis tha	0.674	0.664	0.540	2e-21

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 9   SRNDRLNNNMKPG-YDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCC 67
           S +  L  +MKP   DL  RLE SGG+ +CWN+L+ELKSC+NEI +FFLN QADI  DCC
Sbjct: 21  SASRELPMSMKPAELDLVARLETSGGLVECWNALVELKSCTNEIILFFLNGQADIGPDCC 80

Query: 68  RAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASS 103
            AIDII RNCWP MLTSLGFTAEEGNILRGYCDA +
Sbjct: 81  GAIDIITRNCWPTMLTSLGFTAEEGNILRGYCDAYT 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 81/112 (72%), Gaps = 3/112 (2%)

Query: 4   IANTTSRNDRLNNNMKPGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADID 63
           +AN  +  D   N   PG DL TRLE SGG+ +CWN+LME++ C+NEI +FFLN Q  + 
Sbjct: 16  MANAAATRDLPTN---PGLDLTTRLETSGGLVECWNALMEIRQCTNEIILFFLNGQTVLG 72

Query: 64  HDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSLGGLVVIYQ 115
            +CC+AI II RNCWPAMLTSLGFTAEEGNIL+GYC+ASS P       +YQ
Sbjct: 73  PECCQAISIITRNCWPAMLTSLGFTAEEGNILQGYCNASSGPPTPASPPLYQ 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/126 (53%), Positives = 82/126 (65%), Gaps = 16/126 (12%)

Query: 7   TTSRNDRLNNNMKPGYD-LATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHD 65
           +T+  D L N  KPG++ L+ RLE  G + +CWN+L+E+KSC+NEI +FF+  QADI  D
Sbjct: 22  STAARDILIN--KPGFNSLSARLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPD 79

Query: 66  CCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDAS-----------SVPS--LGGLVV 112
           CCRAI  I  NCWPAM TSLGFT EEGNILRGYCDAS           S PS    G   
Sbjct: 80  CCRAIHTITHNCWPAMFTSLGFTDEEGNILRGYCDASPNSPSIYFSPASAPSPLAAGAPA 139

Query: 113 IYQPQV 118
            YQP +
Sbjct: 140 QYQPML 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 2/88 (2%)

Query: 21  GYDLATRLE--ASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCW 78
           G  L  R+E  +S  +  CWN+L+E+KSCSNEI +FFLN   DI  DCCR+I I   NCW
Sbjct: 30  GNSLEARIEGSSSSSLVDCWNALIEIKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNCW 89

Query: 79  PAMLTSLGFTAEEGNILRGYCDASSVPS 106
           PAMLTS+GFTAEEGNILRGYCD +S  S
Sbjct: 90  PAMLTSIGFTAEEGNILRGYCDNASSSS 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL+ SGG+ +CWN+L ELKSC+NEI +FFLN +  +   CC ++DII  NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 83  TSLGFTAEEGNILRGYC------DASSVPS 106
           TSLGFT EE N+LRG+C      D+S  PS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL+ SGG+ +CWN+L ELKSC+NEI +FFLN +  +   CC ++DII  NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 83  TSLGFTAEEGNILRGYC------DASSVPS 106
           TSLGFT EE N+LRG+C      D+S  PS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 10/92 (10%)

Query: 18  MKPGYD--------LATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADID--HDCC 67
           +K  YD        L T   + GG+  CWN+LME+KSCSNEI +FFLN Q DI    DCC
Sbjct: 27  IKQAYDNTETRVLLLETSSSSGGGLVDCWNALMEIKSCSNEIILFFLNGQTDITIGADCC 86

Query: 68  RAIDIIARNCWPAMLTSLGFTAEEGNILRGYC 99
            AI IIA NCWP+MLTSLGFT EE NIL GYC
Sbjct: 87  SAISIIAHNCWPSMLTSLGFTVEEVNILNGYC 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL+ SGG+ +CWN L ELKSC+NEI +FFLN +  +   CC A+DII  NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNVLYELKSCTNEIVLFFLNGETKLGVSCCEAVDIITTNCWPAML 93

Query: 83  TSLGFTAEEGNILRGYCD 100
           TSLGFT EE N+LRG+C 
Sbjct: 94  TSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL   GG+ +CW++L ELKSC+NEI +FFLN +  +   CC A+D+I  +CWPAML
Sbjct: 33  NIAARLTG-GGLMQCWDALYELKSCTNEIVLFFLNGETKLGSGCCNAVDVITTDCWPAML 91

Query: 83  TSLGFTAEEGNILRGYCDASSVPSLGG 109
           TSLGFT+EE N+LRG+C +   P+ GG
Sbjct: 92  TSLGFTSEETNVLRGFCQS---PTSGG 115

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227093|ref|NP_179767.1| uncharacterized protein [Arabidopsis thaliana] gi|75206216|sp|Q9SJ23.1|EC13_ARATH RecName: Full=Egg cell-secreted protein 1.3; Flags: Precursor gi|4417270|gb|AAD20395.1| hypothetical protein [Arabidopsis thaliana] gi|91805457|gb|ABE65457.1| hypothetical protein At2g21750 [Arabidopsis thaliana] gi|330252125|gb|AEC07219.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)

Query: 23  DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
           ++A RL   GG+ +CW++L ELKSC+NEI +FFLN +  + + CC A+D+I  +CWPAML
Sbjct: 33  NIAARLTG-GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91

Query: 83  TSLGFTAEEGNILRGYCDASSVPSLGG 109
           TSLGFT EE N+LRG+C +   P+ GG
Sbjct: 92  TSLGFTLEETNVLRGFCQS---PNSGG 115

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.674	0.653	0.566	2.6e-24
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.674	0.664	0.540	8.7e-24
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.674	0.664	0.540	1.8e-23
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.723	0.563	0.460	2.8e-18
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.626	0.496	0.447	1.6e-15
TAIR|locus:504955577	119	AT3G48675 "AT3G48675" [Arabido	0.569	0.588	0.346	1.6e-06
TAIR|locus:504954846	120	AT5G52965 "AT5G52965" [Arabido	0.390	0.4	0.346	1.9e-05
TAIR|locus:505006689	121	AT5G52975 "AT5G52975" [Arabido	0.390	0.396	0.346	1.9e-05
TAIR|locus:4010713622	120	AT2G14378 [Arabidopsis thalian	0.390	0.4	0.346	6.3e-05
TAIR|locus:504954984	168	AT5G53905 "AT5G53905" [Arabido	0.357	0.261	0.354	0.00013

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 51/90 (56%), Positives = 66/90 (73%)

Query:    23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
             ++A RL+ SGG+ +CWN+L ELKSC+NEI +FFLN +  +   CC ++DII  NCWPAML
Sbjct:    35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query:    83 TSLGFTAEEGNILRGYC------DASSVPS 106
             TSLGFT EE N+LRG+C      D+S  PS
Sbjct:    94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 47/87 (54%), Positives = 67/87 (77%)

Query:    23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
             ++A RL   GG+ +CWN+L ELKSC+NEI +FFLN +  +  DCC+A+++I  +CWPAML
Sbjct:    33 NIAARLNG-GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91

Query:    83 TSLGFTAEEGNILRGYCDASSVPSLGG 109
             TSLGFT++E N+LRG+C +   P+ GG
Sbjct:    92 TSLGFTSDETNVLRGFCQS---PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 47/87 (54%), Positives = 65/87 (74%)

Query:    23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
             ++A RL   GG+ +CW++L ELKSC+NEI +FFLN +  + + CC A+D+I  +CWPAML
Sbjct:    33 NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91

Query:    83 TSLGFTAEEGNILRGYCDASSVPSLGG 109
             TSLGFT EE N+LRG+C +   P+ GG
Sbjct:    92 TSLGFTLEETNVLRGFCQS---PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 41/89 (46%), Positives = 55/89 (61%)

Query:    20 PGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWP 79
             P   L  RL+       CW+SLM+L+ CS E+ +FFLN +  I   CC AI  I R CWP
Sbjct:    40 PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99

Query:    80 AMLTSLGFTAEEGNILRGYCDASSVPSLG 108
              M+  LGFTA+EG++L+GYCD +   + G
Sbjct:   100 TMIGVLGFTAQEGDMLQGYCDGNDSDNNG 128

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query:    24 LATRLEASGGITKCWNSLMELKSCSNEIGIFFLNS--------QADIDHDCCRAIDIIAR 75
             +AT    +G +  CWN+ +ELKSC++EI  FFL+         +  ID DCC AI ++ +
Sbjct:    40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query:    76 NCWPAMLTSLGFTAEEGNILRGYCD 100
             +CW  M TSLG T  EGN LR YC+
Sbjct:   100 DCWSVMFTSLGLTTMEGNNLREYCE 124

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:504955577 AT3G48675 "AT3G48675" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 26/75 (34%), Positives = 36/75 (48%)

Query:    34 ITKCWNSLMELKSCSNEIGIFFLNSQ-ADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEG 92
             I KCW+SL  ++ C  EI     + Q A I+  CC+    I  NCWP M     F     
Sbjct:    44 IIKCWSSLFNVQGCVQEIYKSIFSGQFASIEAPCCKTFSAIDTNCWPHMFPLNPFFPP-- 101

Query:    93 NILRGYCDA-SSVPS 106
              IL+  C+  ++ PS
Sbjct:   102 -ILKNNCERIATTPS 115

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954846 AT5G52965 "AT5G52965" [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query:    34 ITKCWNSLMELKSCSNEIG-IFFLNSQADIDHDCCRAIDIIARNCWPAM 81
             + KCW+SL  ++ C  EI    F     +++  CC+A   +  NCWP M
Sbjct:    46 LVKCWSSLFNVEGCVLEIAKSIFSGKFENVEAACCKAFSTLDANCWPHM 94

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006689 AT5G52975 "AT5G52975" [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query:    34 ITKCWNSLMELKSCSNEIG-IFFLNSQADIDHDCCRAIDIIARNCWPAM 81
             + KCW+SL  ++ C  EI    F     +++  CC+A   +  NCWP M
Sbjct:    47 LVKCWSSLFNVEGCVLEIAKSIFSGKFENVEAACCKAFSTLDANCWPHM 95

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713622 AT2G14378 [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query:    34 ITKCWNSLMELKSCSNEI-GIFFLNSQADIDHDCCRAIDIIARNCWPAM 81
             + KCW+SL   + C  E+    F     D+   CC+A   +  NCWP M
Sbjct:    47 VEKCWSSLFNTQGCVFELLKSVFSGRFGDVGVACCKAFSTVDANCWPHM 95

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:504954984 AT5G53905 "AT5G53905" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00013, P = 0.00013
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query:    34 ITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAM 81
             +TKCW+SL  ++ C+ EI  + L ++     + C+A   +  NCWP M
Sbjct:    25 LTKCWSSLFNVQGCNIEILKYVLTAK----FESCKAFTEVDANCWPKM 68

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.5666	0.6747	0.6535	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019340001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (135 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	123
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	2e-15

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 64.8 bits (158), Expect = 2e-15
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 36  KCWNSLME-LKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAMLTSLGFTAE-EGN 93
           KCW++    +  C +EI      ++ ++  DCC+AI  I  +CWPA+             
Sbjct: 1   KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK 60

Query: 94  ILRGYCD 100
           +L+ YC 
Sbjct: 61  LLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
PLN00213	118	predicted protein; Provisional	99.94
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.79

>PLN00213 predicted protein; Provisional

Probab=99.94  E-value=6.2e-28  Score=178.87  Aligned_cols=71  Identities=25%  Similarity=0.546  Sum_probs=65.9

Q ss_pred             CCchhhhhhcccCcchHHHHHHHHhhCccc-cCccchHHHHhhhcCcccccccCCCCCchhhhhhhcccccCCCCCC
Q 039079           32 GGITKCWNSLMELKSCSNEIGIFFLNSQAD-IDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCDASSVPSL  107 (123)
Q Consensus        32 ~~l~kCWsSl~~v~gC~~EI~~sflnGe~~-LGp~CCkAI~~I~~~CWP~mfps~pFt~~e~~iLKg~C~~~~~~sP  107 (123)
                      .|+.||||||++++||+.||++++++|||+ ||++|||||++++ +|||+| |.+||+++   +||++|++++..+|
T Consensus        43 pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nCwP~~-P~~P~fPp---~LK~~Cs~i~~~~~  114 (118)
T PLN00213         43 PDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NCIPKI-PFIPFFPP---MLKEQCSRVAGATP  114 (118)
T ss_pred             ccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-ccccCC-cCCCccch---HHHHHHhcccCCCC
Confidence            488999999999999999999999999997 9999999999966 999995 99999999   99999999974444

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.79  E-value=4.5e-20  Score=121.37  Aligned_cols=64  Identities=31%  Similarity=0.666  Sum_probs=56.7

Q ss_pred             hhhhhcccCcchHHHHHHHHhhCccc-cCccchHHHHhhhcCcccc---cccCCCCCch--hhhhhhcccc
Q 039079           36 KCWNSLMELKSCSNEIGIFFLNSQAD-IDHDCCRAIDIIARNCWPA---MLTSLGFTAE--EGNILRGYCD  100 (123)
Q Consensus        36 kCWsSl~~v~gC~~EI~~sflnGe~~-LGp~CCkAI~~I~~~CWP~---mfps~pFt~~--e~~iLKg~C~  100 (123)
                      |||++++++++|+.||+.+|++|+.. ||++||+||+.++++|||.   ||+..||+++  + +.|+++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r-~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLR-DLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhH-HHHHhhcC
Confidence            69999999999999999999999854 9999999999999999999   6666666655  4 59999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00