Citrus Sinensis ID: 039172
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | 2.2.26 [Sep-21-2011] | |||||||
| Q2N8R7 | 344 | Probable tRNA threonylcar | yes | no | 0.687 | 0.953 | 0.403 | 1e-63 | |
| Q5FPS6 | 365 | Probable tRNA threonylcar | yes | no | 0.714 | 0.934 | 0.409 | 1e-63 | |
| Q0P4K0 | 405 | Probable tRNA threonylcar | yes | no | 0.679 | 0.8 | 0.412 | 9e-63 | |
| Q4V7F3 | 414 | Probable tRNA threonylcar | yes | no | 0.750 | 0.864 | 0.385 | 1e-62 | |
| Q32LQ3 | 404 | Probable tRNA threonylcar | yes | no | 0.750 | 0.886 | 0.385 | 2e-62 | |
| Q6PEB4 | 414 | Probable tRNA threonylcar | yes | no | 0.750 | 0.864 | 0.379 | 3e-62 | |
| Q2VYV2 | 347 | Probable tRNA threonylcar | yes | no | 0.706 | 0.971 | 0.403 | 4e-62 | |
| Q92LH8 | 360 | Probable tRNA threonylcar | yes | no | 0.708 | 0.938 | 0.404 | 6e-62 | |
| Q6FYF1 | 364 | Probable tRNA threonylcar | yes | no | 0.702 | 0.920 | 0.397 | 9e-62 | |
| A5VSL6 | 359 | Probable tRNA threonylcar | yes | no | 0.727 | 0.966 | 0.392 | 1e-61 |
| >sp|Q2N8R7|GCP_ERYLH Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Erythrobacter litoralis (strain HTCC2594) GN=gcp PE=3 SV=1 | Back alignment and function desciption |
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Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 218/374 (58%), Gaps = 46/374 (12%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
I+LGIE+SCD+TAAA+V + IL+Q ++SQ + A YGGV P++A AH+ + P+++
Sbjct: 3 IVLGIESSCDETAAALVATDRTILAQHIASQDEAHAPYGGVVPEIAARAHAERLAPMIEA 62
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
+ +A + DL A+A T GPGL + VG+ A+ IA P++ ++H+E HAL +R
Sbjct: 63 VMQEAGVDYADLDAIAATAGPGLIGGVMVGLVSAKAIAMAAGKPLIAINHLEGHALSSR- 121
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
L + ++ + L + GH ++L +GQY +L TTIDDA+GEAFDKTAK
Sbjct: 122 -LADSELEFPYALLLV--------SGGHCQILLVEGVGQYRRLATTIDDALGEAFDKTAK 172
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
LGL GGPAVEKLA +GDA++V PM + +FS+AGLK+ V A ES +
Sbjct: 173 ILGLGY--PGGPAVEKLARDGDAQAVPLPRPMLGSAEPHFSFAGLKSAVLRAKESGD--- 227
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAI---EWALKIEPSIKHLVVSGGV 370
A+IAASFQ+ AV + +R + A+ +W P+ LVV+GGV
Sbjct: 228 ------------HEDADIAASFQQAAVDCILDRLQVALGGDDW----PPA---LVVAGGV 268
Query: 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPED 430
A+N+ +RA L+ + S++ V PP +LCTDN M+ W G E + + DDP D
Sbjct: 269 AANQTIRAALEGFAADRSMRFVAPPLALCTDNAAMIGWAGCERLDLEQ-------DDPLD 321
Query: 431 FMYDLRPRWPLGEE 444
F RPRWPL E
Sbjct: 322 FRA--RPRWPLDPE 333
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Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Erythrobacter litoralis (strain HTCC2594) (taxid: 314225) |
| >sp|Q5FPS6|GCP_GLUOX Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Gluconobacter oxydans (strain 621H) GN=gcp PE=3 SV=2 | Back alignment and function description |
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| >sp|Q0P4K0|OSGP2_XENTR Probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1 OS=Xenopus tropicalis GN=osgepl1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q4V7F3|OSGP2_RAT Probable tRNA threonylcarbamoyladenosine biosynthesis protein Osgepl1 OS=Rattus norvegicus GN=Osgepl1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q32LQ3|OSGC2_DANRE Probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1 OS=Danio rerio GN=osgepl1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6PEB4|OSGP2_MOUSE Probable tRNA threonylcarbamoyladenosine biosynthesis protein Osgepl1 OS=Mus musculus GN=Osgepl1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q2VYV2|GCP_MAGSA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=gcp PE=3 SV=1 | Back alignment and function description |
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| >sp|Q92LH8|GCP_RHIME Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Rhizobium meliloti (strain 1021) GN=gcp PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6FYF1|GCP_BARQU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Bartonella quintana (strain Toulouse) GN=gcp PE=3 SV=1 | Back alignment and function description |
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| >sp|A5VSL6|GCP_BRUO2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gcp PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | ||||||
| 224127350 | 464 | predicted protein [Populus trichocarpa] | 0.958 | 0.984 | 0.763 | 0.0 | |
| 225454005 | 468 | PREDICTED: probable tRNA threonylcarbamo | 0.962 | 0.980 | 0.727 | 0.0 | |
| 18406750 | 480 | glycoprotease 1 [Arabidopsis thaliana] g | 0.966 | 0.960 | 0.690 | 0.0 | |
| 297824571 | 468 | predicted protein [Arabidopsis lyrata su | 0.951 | 0.970 | 0.688 | 0.0 | |
| 449480334 | 486 | PREDICTED: probable tRNA threonylcarbamo | 0.945 | 0.927 | 0.712 | 0.0 | |
| 356506230 | 445 | PREDICTED: probable tRNA threonylcarbamo | 0.920 | 0.986 | 0.724 | 0.0 | |
| 255541248 | 455 | O-sialoglycoprotein endopeptidase, putat | 0.949 | 0.995 | 0.733 | 0.0 | |
| 449432269 | 469 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.945 | 0.961 | 0.694 | 1e-179 | |
| 357469761 | 441 | hypothetical protein MTR_4g024920 [Medic | 0.905 | 0.979 | 0.700 | 1e-178 | |
| 242057135 | 469 | hypothetical protein SORBIDRAFT_03g01203 | 0.823 | 0.837 | 0.740 | 1e-173 |
| >gi|224127350|ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|222860825|gb|EEE98367.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/478 (76%), Positives = 402/478 (84%), Gaps = 21/478 (4%)
Query: 4 LQTLSSRISRLNLLQ-KPSLNYSPMSPGLFVRHNRQIIRPTWSPLRIFSLPNRHFSSKNF 62
L +LSS ISRLNL KPS+ YS +S L + II P WSPL S H +S+
Sbjct: 2 LSSLSSTISRLNLFYPKPSIPYS-LSSCLKTLKPQPII-PRWSPLHSLS---THSTSRLS 56
Query: 63 GQIK-----MSAKDDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPK 117
+K + +KDDL++LGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPK
Sbjct: 57 TSLKPQFETLVSKDDLVVLGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPK 116
Query: 118 MAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLP 177
MAEEAHS ID VVQEAL KANLT +LSAVAVTIGPGLSLCLRVGV+KARK+AG FNLP
Sbjct: 117 MAEEAHSQVIDQVVQEALDKANLTATNLSAVAVTIGPGLSLCLRVGVRKARKLAGSFNLP 176
Query: 178 IVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLG 237
I+G+HHMEAHALVAR L +Q F+ L + GHNLL+LAH+LG Y QLG
Sbjct: 177 IIGIHHMEAHALVAR--LIERELQFPFMALLI--------SGGHNLLILAHDLGHYIQLG 226
Query: 238 TTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAG 297
TTIDDAIGEA+DKTAKWLGLDM RSGGPA+E+LA EGDAES+KFSTPMKQHKDCNFSYAG
Sbjct: 227 TTIDDAIGEAYDKTAKWLGLDMSRSGGPALEELAREGDAESIKFSTPMKQHKDCNFSYAG 286
Query: 298 LKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKI 357
LKTQVRLAIESKNI++ IPISS S QDR+SRA+IAASFQRVAVLHLEERC+RAIEWA KI
Sbjct: 287 LKTQVRLAIESKNINAEIPISSASSQDRRSRADIAASFQRVAVLHLEERCDRAIEWARKI 346
Query: 358 EPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVG 417
EPSIKHLVVSGGVASN+YVRARLD VK NSLQLVCPPP LCTDNGVMVAWTGIEHFC+G
Sbjct: 347 EPSIKHLVVSGGVASNQYVRARLDHVVKKNSLQLVCPPPKLCTDNGVMVAWTGIEHFCMG 406
Query: 418 RFDPPPPADDPEDFMYDLRPRWPLGEEFAEGRSEARSLRKARMHPSLTSIIQASMQQQ 475
RFDPPPPAD+ ED+MYDLRPRWPLGEE+AEGRSEARSLR AR+HPSLTSIIQAS+QQQ
Sbjct: 407 RFDPPPPADEHEDYMYDLRPRWPLGEEYAEGRSEARSLRTARIHPSLTSIIQASLQQQ 464
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454005|ref|XP_002280713.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1 [Vitis vinifera] gi|296089195|emb|CBI38898.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18406750|ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380780|gb|AAL36220.1| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|18460924|gb|AAK00530.1| sialoglycoprotease GCP1 [Arabidopsis thaliana] gi|20196913|gb|AAB82636.2| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|21436377|gb|AAM51358.1| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|330255438|gb|AEC10532.1| glycoprotease 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297824571|ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326007|gb|EFH56427.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449480334|ref|XP_004155864.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356506230|ref|XP_003521890.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255541248|ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis] gi|223548868|gb|EEF50357.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449432269|ref|XP_004133922.1| PREDICTED: LOW QUALITY PROTEIN: probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357469761|ref|XP_003605165.1| hypothetical protein MTR_4g024920 [Medicago truncatula] gi|355506220|gb|AES87362.1| hypothetical protein MTR_4g024920 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|242057135|ref|XP_002457713.1| hypothetical protein SORBIDRAFT_03g012030 [Sorghum bicolor] gi|241929688|gb|EES02833.1| hypothetical protein SORBIDRAFT_03g012030 [Sorghum bicolor] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | ||||||
| TAIR|locus:2050872 | 480 | GCP1 "glycoprotease 1" [Arabid | 0.966 | 0.960 | 0.676 | 3.5e-162 | |
| UNIPROTKB|F1NZ71 | 411 | OSGEPL1 "Uncharacterized prote | 0.830 | 0.963 | 0.355 | 1.2e-58 | |
| ZFIN|ZDB-GENE-030616-532 | 404 | osgepl1 "O-sialoglycoprotein e | 0.748 | 0.883 | 0.386 | 1.9e-58 | |
| UNIPROTKB|E1BHC5 | 414 | OSGEPL1 "Uncharacterized prote | 0.750 | 0.864 | 0.379 | 1.7e-57 | |
| RGD|1305575 | 414 | Osgepl1 "O-sialoglycoprotein e | 0.773 | 0.891 | 0.375 | 2.8e-57 | |
| MGI|MGI:1919335 | 414 | Osgepl1 "O-sialoglycoprotein e | 0.773 | 0.891 | 0.370 | 3.6e-57 | |
| UNIPROTKB|F1RXU6 | 414 | OSGEPL1 "Uncharacterized prote | 0.771 | 0.888 | 0.369 | 4.6e-57 | |
| UNIPROTKB|Q9H4B0 | 414 | OSGEPL1 "Probable tRNA threony | 0.750 | 0.864 | 0.379 | 1.4e-55 | |
| UNIPROTKB|P05852 | 337 | tsaD "protein involved in thre | 0.477 | 0.676 | 0.4 | 1.6e-53 | |
| TIGR_CMR|CBU_1240 | 339 | CBU_1240 "O-sialoglycoprotein | 0.448 | 0.631 | 0.429 | 4.2e-53 |
| TAIR|locus:2050872 GCP1 "glycoprotease 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 326/482 (67%), Positives = 383/482 (79%)
Query: 6 TLSSRISRLNLLQKPS-LNYSPMSPGLFVRHNRQIIRPTWSPLRIFSLPN----RHFSSK 60
TLS ISR NL S L + S L H + PT+S + S PN R +S++
Sbjct: 7 TLSPAISRFNLYPGISILARNNNSLRLQKHHKLKTKTPTFSLISPSSSPNFQRTRFYSTE 66
Query: 61 N-FGQIKMSAK----DDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVA 115
+ S D+L++LGIETSCDDTAAAVVRGNGEILSQV+SSQA+LL +YGGVA
Sbjct: 67 TRISSLPYSENPNFDDNLVVLGIETSCDDTAAAVVRGNGEILSQVISSQAELLVQYGGVA 126
Query: 116 PKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFN 175
PK AEEAHS ID VVQ+AL KANLTE+DLSAVAVTIGPGLSLCLRVGV+KAR++AG F+
Sbjct: 127 PKQAEEAHSRVIDKVVQDALDKANLTEKDLSAVAVTIGPGLSLCLRVGVRKARRVAGNFS 186
Query: 176 LPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQ 235
LPIVGVHHMEAHALVAR L + F+ L + GHNLLVLAH LGQYTQ
Sbjct: 187 LPIVGVHHMEAHALVAR--LVEQELSFPFMALLIS--------GGHNLLVLAHKLGQYTQ 236
Query: 236 LGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSY 295
LGTT+DDAIGEAFDKTAKWLGLDM RSGGPAVE+LALEGDA+SVKF+ PMK HKDCNFSY
Sbjct: 237 LGTTVDDAIGEAFDKTAKWLGLDMHRSGGPAVEELALEGDAKSVKFNVPMKYHKDCNFSY 296
Query: 296 AGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWAL 355
AGLKTQVRLAIE+K ID++ P+SS + +DR++RA+IAASFQRVAVLHLEE+CERAI+WAL
Sbjct: 297 AGLKTQVRLAIEAKEIDAKCPVSSATNEDRRNRADIAASFQRVAVLHLEEKCERAIDWAL 356
Query: 356 KIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFC 415
++EPSIKH+V+SGGVASNKYVR RL+ V+N +L+LVCPPPSLCTDNGVMVAWTG+EHF
Sbjct: 357 ELEPSIKHMVISGGVASNKYVRLRLNNIVENKNLKLVCPPPSLCTDNGVMVAWTGLEHFR 416
Query: 416 VGRFXXXXXXXXXXXFMYDLRPRWPLGEEFAEGRSEARSLRKARMHPSLTSIIQA-SMQQ 474
VGR+ ++YDLRPRWPLGEE+A+GRSEARS+R AR+HPSLTSII+A S+QQ
Sbjct: 417 VGRYDPPPPATEPEDYVYDLRPRWPLGEEYAKGRSEARSMRTARIHPSLTSIIRADSLQQ 476
Query: 475 QS 476
Q+
Sbjct: 477 QT 478
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| UNIPROTKB|F1NZ71 OSGEPL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030616-532 osgepl1 "O-sialoglycoprotein endopeptidase-like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BHC5 OSGEPL1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|1305575 Osgepl1 "O-sialoglycoprotein endopeptidase-like 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1919335 Osgepl1 "O-sialoglycoprotein endopeptidase-like 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RXU6 OSGEPL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9H4B0 OSGEPL1 "Probable tRNA threonylcarbamoyladenosine biosynthesis protein OSGEPL1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P05852 tsaD "protein involved in threonylcarbamoyladenosine biosynthesis" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CBU_1240 CBU_1240 "O-sialoglycoprotein endopeptidase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.24 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.4.24.57 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 477 | |||
| PRK09604 | 332 | PRK09604, PRK09604, UGMP family protein; Validated | 1e-131 | |
| TIGR03723 | 314 | TIGR03723, T6A_YgjD, tRNA threonylcarbamoyl adenos | 1e-128 | |
| COG0533 | 342 | COG0533, QRI7, Metal-dependent proteases with poss | 1e-120 | |
| TIGR00329 | 305 | TIGR00329, gcp_kae1, metallohydrolase, glycoprotea | 3e-92 | |
| pfam00814 | 271 | pfam00814, Peptidase_M22, Glycoprotease family | 1e-87 | |
| PRK14878 | 323 | PRK14878, PRK14878, UGMP family protein; Provision | 5e-54 | |
| TIGR03722 | 322 | TIGR03722, arch_KAE1, universal archaeal protein K | 2e-52 | |
| PRK09605 | 535 | PRK09605, PRK09605, bifunctional UGMP family prote | 5e-42 | |
| PTZ00340 | 345 | PTZ00340, PTZ00340, O-sialoglycoprotein endopeptid | 2e-33 | |
| TIGR03725 | 202 | TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenos | 3e-11 | |
| COG1214 | 220 | COG1214, COG1214, Inactive homolog of metal-depend | 1e-08 | |
| cd10229 | 404 | cd10229, HSPA12_like_NBD, Nucleotide-binding domai | 0.003 |
| >gnl|CDD|236585 PRK09604, PRK09604, UGMP family protein; Validated | Back alignment and domain information |
|---|
Score = 382 bits (983), Expect = e-131
Identities = 156/375 (41%), Positives = 206/375 (54%), Gaps = 53/375 (14%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
+ILGIETSCD+T+ AVV +LS VV+SQ DL A+YGGV P++A AH I P+++E
Sbjct: 2 LILGIETSCDETSVAVVDDGRGLLSNVVASQIDLHARYGGVVPELASRAHVENIVPLIEE 61
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
AL +A LT D+ A+AVT GPGL L VGV A+ +A N P++GV+H+E H L
Sbjct: 62 ALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNKPLIGVNHLEGHLLAPF- 120
Query: 194 WLTMTRMQND----FLDLFNNIHIGQKDTSG-HNLLVLAHNLGQYTQLGTTIDDAIGEAF 248
++ + FL L SG H LVL +G Y LG T+DDA GEAF
Sbjct: 121 ------LEEEPEFPFLALL---------VSGGHTQLVLVKGIGDYELLGETLDDAAGEAF 165
Query: 249 DKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
DK AK LGL GGPA++KLA +GD ++ KF PM + +FS++GLKT V IE
Sbjct: 166 DKVAKLLGLGY--PGGPAIDKLAKQGDPDAFKFPRPMDRP-GLDFSFSGLKTAVLNTIEK 222
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSG 368
+A+IAASFQ V L + +RA++ + +K LVV+G
Sbjct: 223 SEQT---------------KADIAASFQAAVVDVLVIKTKRALK-----QTGVKTLVVAG 262
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+N +R RL K +++ PP LCTDN M+A G E G F
Sbjct: 263 GVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYERLKAGEFSDL------ 316
Query: 429 EDFMYDLRPRWPLGE 443
D + RPRWPL E
Sbjct: 317 -DL--NARPRWPLDE 328
|
Length = 332 |
| >gnl|CDD|234330 TIGR03723, T6A_YgjD, tRNA threonylcarbamoyl adenosine modification protein YgjD | Back alignment and domain information |
|---|
| >gnl|CDD|223607 COG0533, QRI7, Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|129429 TIGR00329, gcp_kae1, metallohydrolase, glycoprotease/Kae1 family | Back alignment and domain information |
|---|
| >gnl|CDD|216132 pfam00814, Peptidase_M22, Glycoprotease family | Back alignment and domain information |
|---|
| >gnl|CDD|184878 PRK14878, PRK14878, UGMP family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234329 TIGR03722, arch_KAE1, universal archaeal protein Kae1 | Back alignment and domain information |
|---|
| >gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|240369 PTZ00340, PTZ00340, O-sialoglycoprotein endopeptidase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234332 TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ | Back alignment and domain information |
|---|
| >gnl|CDD|224135 COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| COG0533 | 342 | QRI7 Metal-dependent proteases with possible chape | 100.0 | |
| PTZ00340 | 345 | O-sialoglycoprotein endopeptidase-like protein; Pr | 100.0 | |
| KOG2707 | 405 | consensus Predicted metalloprotease with chaperone | 100.0 | |
| PRK09604 | 332 | UGMP family protein; Validated | 100.0 | |
| TIGR00329 | 305 | gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami | 100.0 | |
| TIGR03723 | 314 | bact_gcp putative glycoprotease GCP. This model re | 100.0 | |
| PRK14878 | 323 | UGMP family protein; Provisional | 100.0 | |
| TIGR03722 | 322 | arch_KAE1 universal archaeal protein Kae1. This fa | 100.0 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 100.0 | |
| PF00814 | 268 | Peptidase_M22: Glycoprotease family; InterPro: IPR | 100.0 | |
| KOG2708 | 336 | consensus Predicted metalloprotease with chaperone | 100.0 | |
| TIGR00143 | 711 | hypF [NiFe] hydrogenase maturation protein HypF. A | 99.97 | |
| COG2192 | 555 | Predicted carbamoyl transferase, NodU family [Post | 99.96 | |
| COG0068 | 750 | HypF Hydrogenase maturation factor [Posttranslatio | 99.95 | |
| TIGR03725 | 202 | bact_YeaZ universal bacterial protein YeaZ. This f | 99.87 | |
| COG1214 | 220 | Inactive homolog of metal-dependent proteases, put | 99.85 | |
| PF02543 | 360 | CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 | 99.73 | |
| TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s | 99.67 | |
| TIGR02261 | 262 | benz_CoA_red_D benzoyl-CoA reductase, bcr type, su | 99.64 | |
| COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HS | 99.64 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 99.61 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 99.55 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 99.4 | |
| TIGR02259 | 432 | benz_CoA_red_A benzoyl-CoA reductase, bcr type, su | 99.27 | |
| TIGR00555 | 279 | panK_eukar pantothenate kinase, eukaryotic/staphyl | 98.81 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 98.18 | |
| PRK03011 | 358 | butyrate kinase; Provisional | 97.88 | |
| PRK09585 | 365 | anmK anhydro-N-acetylmuramic acid kinase; Reviewed | 97.6 | |
| COG3426 | 358 | Butyrate kinase [Energy production and conversion] | 97.31 | |
| PF03702 | 364 | UPF0075: Uncharacterised protein family (UPF0075); | 97.28 | |
| COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Trans | 97.25 | |
| PRK09557 | 301 | fructokinase; Reviewed | 97.16 | |
| TIGR00744 | 318 | ROK_glcA_fam ROK family protein (putative glucokin | 96.98 | |
| PRK13310 | 303 | N-acetyl-D-glucosamine kinase; Provisional | 96.97 | |
| PRK05082 | 291 | N-acetylmannosamine kinase; Provisional | 96.73 | |
| TIGR02707 | 351 | butyr_kinase butyrate kinase. This model represent | 96.7 | |
| COG2971 | 301 | Predicted N-acetylglucosamine kinase [Carbohydrate | 96.42 | |
| COG2377 | 371 | Predicted molecular chaperone distantly related to | 96.24 | |
| PLN02920 | 398 | pantothenate kinase 1 | 96.07 | |
| PRK09698 | 302 | D-allose kinase; Provisional | 95.82 | |
| PF03630 | 341 | Fumble: Fumble ; InterPro: IPR004567 Pantothenate | 95.51 | |
| PRK00976 | 326 | hypothetical protein; Provisional | 95.16 | |
| PF02782 | 198 | FGGY_C: FGGY family of carbohydrate kinases, C-ter | 94.88 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 94.74 | |
| PF00370 | 245 | FGGY_N: FGGY family of carbohydrate kinases, N-ter | 94.14 | |
| PTZ00297 | 1452 | pantothenate kinase; Provisional | 93.4 | |
| smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF | 93.19 | |
| PLN02295 | 512 | glycerol kinase | 92.52 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 92.37 | |
| PRK00039 | 164 | ruvC Holliday junction resolvase; Reviewed | 92.3 | |
| PLN02902 | 876 | pantothenate kinase | 91.71 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 91.6 | |
| TIGR01315 | 541 | 5C_CHO_kinase FGGY-family pentulose kinase. This m | 91.52 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 91.0 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 90.95 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 90.65 | |
| PLN02669 | 556 | xylulokinase | 90.6 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 90.38 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 90.29 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 89.58 | |
| TIGR01234 | 536 | L-ribulokinase L-ribulokinase. This enzyme catalyz | 88.99 | |
| KOG2201 | 371 | consensus Pantothenate kinase PanK and related pro | 88.56 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 88.18 | |
| PF00480 | 179 | ROK: ROK family; InterPro: IPR000600 A family of b | 88.06 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 87.54 | |
| PRK04123 | 548 | ribulokinase; Provisional | 87.41 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 87.08 | |
| PRK15027 | 484 | xylulokinase; Provisional | 86.83 | |
| PRK13311 | 256 | N-acetyl-D-glucosamine kinase; Provisional | 86.76 | |
| TIGR02529 | 239 | EutJ ethanolamine utilization protein EutJ family | 86.74 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 86.59 | |
| PLN02669 | 556 | xylulokinase | 86.46 | |
| PRK14101 | 638 | bifunctional glucokinase/RpiR family transcription | 86.17 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 85.45 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 85.44 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 85.03 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 84.69 | |
| TIGR02628 | 465 | fuculo_kin_coli L-fuculokinase. Members of this fa | 84.63 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 84.44 | |
| PRK15027 | 484 | xylulokinase; Provisional | 84.38 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 84.18 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 83.93 | |
| TIGR02627 | 454 | rhamnulo_kin rhamnulokinase. This model describes | 83.62 | |
| PRK00109 | 138 | Holliday junction resolvase-like protein; Reviewed | 83.09 | |
| PRK10640 | 471 | rhaB rhamnulokinase; Provisional | 82.97 | |
| cd00529 | 154 | RuvC_resolvase Holliday junction resolvases (HJRs) | 82.95 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 82.68 | |
| PF07318 | 343 | DUF1464: Protein of unknown function (DUF1464); In | 82.41 | |
| COG4020 | 332 | Uncharacterized protein conserved in archaea [Func | 82.33 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 81.42 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 80.75 |
| >COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-93 Score=715.79 Aligned_cols=338 Identities=41% Similarity=0.683 Sum_probs=314.0
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|+|||||||||+|+|+|++.++ |+++++.+|++.|++|||||||+|+|+|.++++++|+++|+++|++++|||+||+|.
T Consensus 1 m~iLGIEtScDeT~vaIv~~~~-ilan~~~sq~~~h~~~GGVvPe~Asr~H~e~i~~li~~al~eA~~~~~dID~IA~T~ 79 (342)
T COG0533 1 MIILGIETSCDETGVAIVDEEK-ILANVVASQIELHARYGGVVPELASRHHVENIPPLIEEALAEAGVSLEDIDAIAVTA 79 (342)
T ss_pred CeEEEEEcccccceeEEEeccC-hhheehhhcccccCCCCCcCccHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEec
Confidence 7899999999999999999655 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCCc
Q 039172 153 GPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQ 232 (477)
Q Consensus 153 GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~ 232 (477)
|||+.++|+||+++||+||.++++|+++|||+++|++++++ .+.. .+|+++|+ | |||||+++.+++.++
T Consensus 80 gPGL~gaL~VG~~~Ak~LA~a~~kPli~VnH~~gHi~a~~l--~~~~-~~p~v~Ll----V----SGGHTqli~~~~~g~ 148 (342)
T COG0533 80 GPGLGGALLVGATAAKALALALNKPLIPVNHLEGHIEAARL--ETGL-AFPPVALL----V----SGGHTQLIAVRGIGR 148 (342)
T ss_pred CCCchhHHHHHHHHHHHHHHHhCCCEeecchHHHHHHHHHh--ccCC-CCCcEEEE----E----ecCceEEEEEcCCCc
Confidence 99999999999999999999999999999999999999998 3333 89999999 8 999999999999999
Q ss_pred eeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcCC
Q 039172 233 YTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNID 312 (477)
Q Consensus 233 ~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~ 312 (477)
|++||+|+|||+||+||||||+|||+|| |||+||+||.+|+++.+.||+|+...+++|||||||||++.+.+++...+
T Consensus 149 y~ilGeTlDdA~Gea~DKvAR~lGL~yP--GGp~Ie~lA~~G~~~~~~fP~~~~~~~~~DfSFSGLkTa~~~~~~~~~~~ 226 (342)
T COG0533 149 YEVLGETLDDAAGEAFDKVARLLGLGYP--GGPAIEKLAKKGDPDAFEFPRPMVKGKNLDFSFSGLKTAVLRLLKKLKQK 226 (342)
T ss_pred EEEEeeechhhhhHHHHHHHHHhCCCCC--CcHHHHHHHhcCCCCceeCCccccCCCCcceehHhHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999 99999999999998889999998766679999999999999999865421
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEE
Q 039172 313 SRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLV 392 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~ 392 (477)
. +....+++|||+|||++++++|+++++||++ .++.++|+++||||+|++||+++.++|..+|+++|
T Consensus 227 ~--------~~~~~d~~dia~sfQ~av~~~L~~kt~rAl~-----~~~~~~lvi~GGVaaN~~LR~~l~~~~~~~g~~~~ 293 (342)
T COG0533 227 E--------ELNEEDKEDIAASFQEAVFDMLVEKTERALK-----HTGKKELVIAGGVAANSRLREMLEEMCKERGAEVY 293 (342)
T ss_pred c--------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCEEEEeccHHHhHHHHHHHHHHHHhcCCEEE
Confidence 1 1123458899999999999999999999998 78899999999999999999999999998999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCcccc
Q 039172 393 CPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYDLRPRWPLGEEF 445 (477)
Q Consensus 393 ~Pp~~~ctDNGamIa~ag~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 445 (477)
+||+.+|||||+||||+|+++|++|... +.+++.++|||++++..
T Consensus 294 ~p~~~lCtDNaaMIA~ag~~~~~~g~~~--------~~~~~~~~~r~~~~~~~ 338 (342)
T COG0533 294 IPPLELCTDNAAMIAYAGLLRYKAGRFI--------SPLDVNVRPRWRLDEVD 338 (342)
T ss_pred cCChHhccchHHHHHHHHHHHHHcCCCC--------CCcccccCCCCchhhcc
Confidence 9999999999999999999999999753 25678999999999864
|
|
| >PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK09604 UGMP family protein; Validated | Back alignment and domain information |
|---|
| >TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family | Back alignment and domain information |
|---|
| >TIGR03723 bact_gcp putative glycoprotease GCP | Back alignment and domain information |
|---|
| >PRK14878 UGMP family protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03722 arch_KAE1 universal archaeal protein Kae1 | Back alignment and domain information |
|---|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
| >PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF | Back alignment and domain information |
|---|
| >COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03725 bact_YeaZ universal bacterial protein YeaZ | Back alignment and domain information |
|---|
| >COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] | Back alignment and domain information |
|---|
| >TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
|---|
| >TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D | Back alignment and domain information |
|---|
| >COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
|---|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A | Back alignment and domain information |
|---|
| >TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type | Back alignment and domain information |
|---|
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
| >PRK03011 butyrate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed | Back alignment and domain information |
|---|
| >COG3426 Butyrate kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P | Back alignment and domain information |
|---|
| >COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09557 fructokinase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) | Back alignment and domain information |
|---|
| >PRK13310 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05082 N-acetylmannosamine kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02707 butyr_kinase butyrate kinase | Back alignment and domain information |
|---|
| >COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PLN02920 pantothenate kinase 1 | Back alignment and domain information |
|---|
| >PRK09698 D-allose kinase; Provisional | Back alignment and domain information |
|---|
| >PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway | Back alignment and domain information |
|---|
| >PRK00976 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
| >PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
| >PTZ00297 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
|---|
| >PLN02295 glycerol kinase | Back alignment and domain information |
|---|
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK00039 ruvC Holliday junction resolvase; Reviewed | Back alignment and domain information |
|---|
| >PLN02902 pantothenate kinase | Back alignment and domain information |
|---|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase | Back alignment and domain information |
|---|
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
| >TIGR01234 L-ribulokinase L-ribulokinase | Back alignment and domain information |
|---|
| >KOG2201 consensus Pantothenate kinase PanK and related proteins [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] | Back alignment and domain information |
|---|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK04123 ribulokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
| >PRK13311 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02529 EutJ ethanolamine utilization protein EutJ family protein | Back alignment and domain information |
|---|
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
| >PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02628 fuculo_kin_coli L-fuculokinase | Back alignment and domain information |
|---|
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02627 rhamnulo_kin rhamnulokinase | Back alignment and domain information |
|---|
| >PRK00109 Holliday junction resolvase-like protein; Reviewed | Back alignment and domain information |
|---|
| >PRK10640 rhaB rhamnulokinase; Provisional | Back alignment and domain information |
|---|
| >cd00529 RuvC_resolvase Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination | Back alignment and domain information |
|---|
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
| >PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length | Back alignment and domain information |
|---|
| >COG4020 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 477 | ||||
| 2ivn_A | 330 | Structure Of Up1 Protein Length = 330 | 6e-34 | ||
| 3enh_A | 540 | Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length | 4e-27 | ||
| 2vwb_A | 535 | Structure Of The Archaeal Kae1-Bud32 Fusion Protein | 2e-26 | ||
| 3eno_A | 334 | Crystal Structure Of Pyrococcus Furiosus Pcc1 In Co | 2e-25 | ||
| 3r6m_A | 213 | Crystal Structure Of Vibrio Parahaemolyticus Yeaz L | 1e-05 |
| >pdb|2IVN|A Chain A, Structure Of Up1 Protein Length = 330 | Back alignment and structure |
|
| >pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length = 540 | Back alignment and structure |
| >pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex Involved In Transcription And Telomere Homeostasis. Length = 535 | Back alignment and structure |
| >pdb|3ENO|A Chain A, Crystal Structure Of Pyrococcus Furiosus Pcc1 In Complex With Thermoplasma Acidophilum Kae1 Length = 334 | Back alignment and structure |
| >pdb|3R6M|A Chain A, Crystal Structure Of Vibrio Parahaemolyticus Yeaz Length = 213 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Length = 334 | Back alignment and structure |
|---|
Score = 334 bits (859), Expect = e-112
Identities = 99/384 (25%), Positives = 165/384 (42%), Gaps = 52/384 (13%)
Query: 69 AKDDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAID 128
A D +I+LG+E + + ++ IL+ S K GG+ P A HS ID
Sbjct: 2 AMDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYR---PKTGGIRPLDAAVHHSEVID 57
Query: 129 PVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHA 188
V+ AL KA ++ D+ + ++GPGL+ LRV AR I+ PI+GV+H H
Sbjct: 58 TVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHI 117
Query: 189 LVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAF 248
+ R D + L+ SG N V+AH G+Y LG T+D IG
Sbjct: 118 EIGR----RVTGAIDPVMLY---------VSGGNTQVIAHVNGRYRVLGETLDIGIGNMI 164
Query: 249 DKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
DK A+ G+ GGP +EKLA++G + + + K + +++G+ T +++
Sbjct: 165 DKFAREAGIPF--PGGPEIEKLAMKGT-KLLDLPYSV---KGMDTAFSGILTAALQYLKT 218
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSG 368
++ +I+ S Q A L E ERA+ ++++G
Sbjct: 219 G----------------QAIEDISYSIQETAFAMLVEVLERALY-----VSGKDEILMAG 257
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA N+ +R + + ++ C DNG+M+A + + G
Sbjct: 258 GVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGVRMSVE----- 312
Query: 429 EDFMYDLRPRWPLGEEFAEGRSEA 452
+ PR+ + E A ++A
Sbjct: 313 ---ETAVNPRFRIDEVDAPWITDA 333
|
| >2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Length = 330 | Back alignment and structure |
|---|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540 | Back alignment and structure |
|---|
| >2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A Length = 231 | Back alignment and structure |
|---|
| >3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus} Length = 213 | Back alignment and structure |
|---|
| >2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9 Length = 218 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Length = 761 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| 3eno_A | 334 | Putative O-sialoglycoprotein endopeptidase; hydrol | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 100.0 | |
| 2ivn_A | 330 | O-sialoglycoprotein endopeptidase; UP1 keops compl | 100.0 | |
| 3ven_A | 576 | O-carbamoyltransferase TOBZ; antibiotic biosynthes | 100.0 | |
| 3ttc_A | 657 | HYPF, transcriptional regulatory protein; Zn finge | 100.0 | |
| 3vth_A | 761 | Hydrogenase maturation factor; carbamoyltransfer, | 100.0 | |
| 4g9i_A | 772 | Hydrogenase maturation protein HYPF; zinc finger, | 100.0 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 99.97 | |
| 3r6m_A | 213 | YEAZ, resuscitation promoting factor; actin/HSP70 | 99.93 | |
| 2gel_A | 231 | Putative GRAM negative resuscitation promoting FA; | 99.91 | |
| 2a6a_A | 218 | Hypothetical protein TM0874; glycoprotein endopept | 99.91 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 99.66 | |
| 2ews_A | 287 | Pantothenate kinase; PANK, structural genomics, st | 99.54 | |
| 2i7n_A | 360 | Pantothenate kinase 1; PANK, transferase; HET: ACO | 98.76 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 98.08 | |
| 3qbx_A | 371 | Anhydro-N-acetylmuramic acid kinase; acetate and s | 97.92 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 97.75 | |
| 2gup_A | 292 | ROK family protein; sugar kinase, streptococcus pn | 97.64 | |
| 1z05_A | 429 | Transcriptional regulator, ROK family; structural | 97.61 | |
| 2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase | 97.59 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 97.58 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 97.43 | |
| 3vov_A | 302 | Glucokinase, hexokinase; ROK, sugar kinase, transf | 97.41 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 97.41 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 97.4 | |
| 1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family | 97.4 | |
| 4htl_A | 297 | Beta-glucoside kinase; structural genomics, sugar | 97.39 | |
| 2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural gen | 97.38 | |
| 3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, s | 97.35 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 97.33 | |
| 3cqy_A | 370 | Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 | 97.17 | |
| 2yhw_A | 343 | Bifunctional UDP-N-acetylglucosamine 2-epimerase/N | 97.01 | |
| 2ap1_A | 327 | Putative regulator protein; zinc binding protein, | 96.74 | |
| 2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, acti | 96.65 | |
| 1zbs_A | 291 | Hypothetical protein PG1100; alpha-beta protein., | 96.36 | |
| 1saz_A | 381 | Probable butyrate kinase 2; askha (acetate and sug | 96.28 | |
| 3mcp_A | 366 | Glucokinase; structural genomics, joint center for | 94.93 | |
| 3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structur | 94.14 | |
| 1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucos | 93.99 | |
| 1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_ | 92.84 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 92.77 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 92.36 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 91.75 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 91.67 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 91.5 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 91.39 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 91.34 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 91.27 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 90.98 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 90.96 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 90.85 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 90.65 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 90.05 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 90.01 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 89.98 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 89.9 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 89.83 | |
| 1hjr_A | 158 | Holliday junction resolvase (RUVC); site-specific | 89.6 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 89.43 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 89.21 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 89.13 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 89.07 | |
| 2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phos | 89.02 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 88.9 | |
| 4ep4_A | 166 | Crossover junction endodeoxyribonuclease RUVC; res | 88.88 | |
| 4g9i_A | 772 | Hydrogenase maturation protein HYPF; zinc finger, | 88.63 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 88.5 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 88.3 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 87.89 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 87.53 | |
| 3djc_A | 266 | Type III pantothenate kinase; structural genomics, | 87.31 | |
| 1vhx_A | 150 | Putative holliday junction resolvase; structural g | 86.36 | |
| 1woq_A | 267 | Inorganic polyphosphate/ATP-glucomannokinase; tran | 86.32 | |
| 3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MC | 84.8 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 84.09 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 84.06 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 82.17 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 81.6 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 80.98 |
| >3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-74 Score=584.63 Aligned_cols=322 Identities=28% Similarity=0.461 Sum_probs=290.6
Q ss_pred CCcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEE
Q 039172 71 DDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAV 150 (477)
Q Consensus 71 ~~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAv 150 (477)
++|+||||||||||+|+||++ |++++++.+++ .+.+||||+|+.+.++|.+.+.++|++||+++|++++|||+|||
T Consensus 4 ~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~---~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav 79 (334)
T 3eno_A 4 DPMIVLGLEGTAHTISCGIID-ESRILAMESSM---YRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGF 79 (334)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEE---CCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred cCceEEEEECCCcCeEEEEEE-CCEEEEEEEEe---eccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 469999999999999999999 66888886654 46799999999999999999999999999999999999999999
Q ss_pred ecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccC
Q 039172 151 TIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNL 230 (477)
Q Consensus 151 t~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~ 230 (477)
+.|||+||+||||+++||+|+..+++|+++|+||++|++++++ .+++++| ++++ + |||||+++.++ .
T Consensus 80 ~~gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~---~s~~~~p-l~L~----v----sGg~t~l~~~~-~ 146 (334)
T 3eno_A 80 SMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRR---VTGAIDP-VMLY----V----SGGNTQVIAHV-N 146 (334)
T ss_dssp ECSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHH---HHTCSSC-EEEE----E----SSSCEEEEEEC-S
T ss_pred EcCCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHh---cCCCCCC-EEEE----E----ECCCcEEEEEe-C
Confidence 9999999999999999999999999999999999999999998 3567888 5565 6 99999998886 5
Q ss_pred CceeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhc
Q 039172 231 GQYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310 (477)
Q Consensus 231 ~~~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~ 310 (477)
++|++||+|+|+|+|++|||||++||++|| ||++||+||.+|++ .++||.++ ++++|||+|+++++.+.+++.
T Consensus 147 ~~~~~lg~t~d~S~G~~fD~vA~~LGl~y~--g~~~le~lA~~g~~-~~~~~~~~---~~~~~sfsgl~~~v~~~l~~g- 219 (334)
T 3eno_A 147 GRYRVLGETLDIGIGNMIDKFAREAGIPFP--GGPEIEKLAMKGTK-LLDLPYSV---KGMDTAFSGILTAALQYLKTG- 219 (334)
T ss_dssp SBEEEEEEBSSCCHHHHHHHHHTTTTCCSC--HHHHHHTTGGGCCS-CCCCCCCE---ETTEECCHHHHHHHHHHHHTT-
T ss_pred CEEEEeccCCCccHHHHHHHHHHHcCCCCC--CHHHHHHHHhcCCC-CCCCceec---cCceEchHHHHHHHHHHHHcC-
Confidence 899999999999999999999999999998 89999999999986 46665554 257999999999998877542
Q ss_pred CCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCE
Q 039172 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQ 390 (477)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~ 390 (477)
.+++|||++||++++++|++++.++++ .+++++||++||||+|++||++|.+.+++.|++
T Consensus 220 ---------------~~~~diAasfq~~l~~~l~~~~~~a~~-----~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~ 279 (334)
T 3eno_A 220 ---------------QAIEDISYSIQETAFAMLVEVLERALY-----VSGKDEILMAGGVALNRRLRDMVTNMAREAGIR 279 (334)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSE
T ss_pred ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCE
Confidence 247999999999999999999999988 567899999999999999999999999989999
Q ss_pred EEcCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCccc
Q 039172 391 LVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYDLRPRWPLGEE 444 (477)
Q Consensus 391 l~~Pp~~~ctDNGamIa~ag~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 444 (477)
+++||..+|||||+||||+++++++.|...+ ..++.+.|+|++++.
T Consensus 280 v~~p~~~~~~D~G~~iG~a~~~~~~~g~~~~--------~~~~~~~~~~~~~~~ 325 (334)
T 3eno_A 280 SYLTDREYCMDNGIMIAQAALLMYKSGVRMS--------VEETAVNPRFRIDEV 325 (334)
T ss_dssp EECCCTTTTSCCTHHHHHHHHHHHHTTCCCC--------GGGCCCCTTCCGGGS
T ss_pred EEecCCCCCChHHHHHHHHHHHHHHcCCCCC--------cccCccCCCCChhhc
Confidence 9999999999999999999999999997531 125778999999876
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
| >2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* | Back alignment and structure |
|---|
| >3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* | Back alignment and structure |
|---|
| >3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A | Back alignment and structure |
|---|
| >3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A | Back alignment and structure |
|---|
| >4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
| >3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A | Back alignment and structure |
|---|
| >2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9 | Back alignment and structure |
|---|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
| >2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 | Back alignment and structure |
|---|
| >2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* | Back alignment and structure |
|---|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* | Back alignment and structure |
|---|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
| >2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
| >3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
|---|
| >4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
|---|
| >3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} | Back alignment and structure |
|---|
| >2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A | Back alignment and structure |
|---|
| >2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
|---|
| >1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
| >1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* | Back alignment and structure |
|---|
| >3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} | Back alignment and structure |
|---|
| >1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* | Back alignment and structure |
|---|
| >1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6 | Back alignment and structure |
|---|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
| >2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* | Back alignment and structure |
|---|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
| >4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A | Back alignment and structure |
|---|
| >4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
| >3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8 | Back alignment and structure |
|---|
| >1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 477 | ||||
| d2i7na2 | 212 | c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 | 2e-23 | |
| d1huxa_ | 259 | c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase comp | 1e-20 | |
| d1okja1 | 106 | c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Esch | 5e-20 | |
| d2a6aa1 | 103 | c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Th | 2e-16 |
| >d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Fumble-like domain: Pantothenate kinase 1, PANK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.7 bits (238), Expect = 2e-23
Identities = 22/195 (11%), Positives = 53/195 (27%), Gaps = 24/195 (12%)
Query: 218 TSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAE 277
++ ++ Y ++ T G F L ++A +GD+
Sbjct: 34 MGSGVSILAVYSKDNYKRVTGTS--LGGGTFLGLCCLL---TGCETFEEALEMAAKGDST 88
Query: 278 SVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQR 337
+V +K ++ GL+ + + +D S+ ++A +
Sbjct: 89 NVDK--LVKDIYGGDYERFGLQGSAVASSFGNMMSKEK-------RDSISKEDLARATLV 139
Query: 338 VAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAV----KNNSLQLVC 393
++ +I +V G V +L L+ +
Sbjct: 140 TITNNIGSIARMCAL-----NENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALF 194
Query: 394 PP-PSLCTDNGVMVA 407
G ++
Sbjct: 195 LEHEGYFGAVGALLE 209
|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Length = 259 | Back information, alignment and structure |
|---|
| >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} Length = 106 | Back information, alignment and structure |
|---|
| >d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]} Length = 103 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| d2i7na2 | 212 | Pantothenate kinase 1, PANK1 {Human (Homo sapiens) | 99.91 | |
| d1okja1 | 106 | Hypothetical protein YeaZ {Escherichia coli [TaxId | 99.91 | |
| d2a6aa1 | 103 | Hypothetical protein TM0874 {Thermotoga maritima [ | 99.89 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 99.68 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 98.7 | |
| d1zc6a1 | 114 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 96.64 | |
| d1z05a3 | 128 | Transcriptional regulator VC2007 {Vibrio cholerae | 96.48 | |
| d2aa4a1 | 119 | N-acetylmannosamine kinase NanK {Escherichia coli | 96.38 | |
| d1z6ra2 | 129 | Mlc protein {Escherichia coli [TaxId: 562]} | 96.19 | |
| d2hoea3 | 128 | N-acetylglucosamine kinase {Thermotoga maritima [T | 95.97 | |
| d2ch5a2 | 117 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 95.06 | |
| d2ap1a2 | 117 | Putative regulator protein YcfX {Salmonella typhim | 94.97 | |
| d1saza1 | 172 | butyrate kinase 2 {Thermotoga maritima [TaxId: 233 | 94.82 | |
| d2p3ra1 | 252 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 94.18 | |
| d1r59o2 | 235 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 93.46 | |
| d2p3ra2 | 247 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 93.43 | |
| d2gupa1 | 114 | Hypothetical protein SP2142 {Streptococcus pneumon | 91.15 | |
| d1hjra_ | 158 | RuvC resolvase {Escherichia coli [TaxId: 562]} | 87.49 | |
| d1r59o1 | 252 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 87.23 | |
| d1xc3a1 | 118 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 85.98 | |
| d1dkgd2 | 198 | Heat shock protein 70kDa, ATPase fragment {Escheri | 85.46 | |
| d2gupa2 | 175 | Hypothetical protein SP2142 {Streptococcus pneumon | 84.73 | |
| d1bupa2 | 193 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 83.96 | |
| d1woqa1 | 129 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 83.8 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 82.9 | |
| d1saza2 | 203 | butyrate kinase 2 {Thermotoga maritima [TaxId: 233 | 82.81 | |
| d1zbsa2 | 107 | Hypothetical protein PG1100 {Porphyromonas gingiva | 82.57 | |
| d3bzka5 | 149 | Transcriptional accessory factor Tex {Pseudomonas | 81.99 | |
| d1q18a1 | 110 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 81.92 | |
| d2aa4a2 | 170 | N-acetylmannosamine kinase NanK {Escherichia coli | 81.76 |
| >d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Fumble-like domain: Pantothenate kinase 1, PANK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.7e-26 Score=216.85 Aligned_cols=180 Identities=12% Similarity=0.078 Sum_probs=145.6
Q ss_pred cCceeeeeccceeeeeccCCceEEEEEccCCceeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCcccc
Q 039172 201 QNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVK 280 (477)
Q Consensus 201 ~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~ 280 (477)
.||+|.+. + ||+|.++.|++.++|+++|.|. ..|+.||+++++| ++++ +++.|++||..|++..++
T Consensus 26 pfP~llv~----i-----GsGtsii~v~~~~~~~~iggT~--~gGgtf~gla~lL-lg~~--~~~eI~klA~~G~~~~~d 91 (212)
T d2i7na2 26 PYPMLLVN----M-----GSGVSILAVYSKDNYKRVTGTS--LGGGTFLGLCCLL-TGCE--TFEEALEMAAKGDSTNVD 91 (212)
T ss_dssp CCSEEEEE----E-----SSSEEEEEEEETTEEEEEEEES--CSHHHHHHHHHHH-HCCC--SHHHHHHHHHHCCGGGTS
T ss_pred CCCEEEEE----C-----CCCeEEEEEecCCceEEecCCc--ccHHHHHHHHHHh-cCCC--CHHHHHHHHhcCCccccC
Confidence 46788765 4 4458899999999999999997 8899999999999 9987 999999999999998888
Q ss_pred ccccccCCCCceeecchHHHHHHHHHHhhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 039172 281 FSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPS 360 (477)
Q Consensus 281 fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~ 360 (477)
||++.. .+++|||+||++++.......... ........++|||+|||+++++.|++++.++.+ .++
T Consensus 92 l~~~di--~~~~~s~sgL~t~~~a~~fgk~~~-------~~~~~~~~~~DiaaS~q~~v~~~l~~~a~~aa~-----~~~ 157 (212)
T d2i7na2 92 KLVKDI--YGGDYERFGLQGSAVASSFGNMMS-------KEKRDSISKEDLARATLVTITNNIGSIARMCAL-----NEN 157 (212)
T ss_dssp EEHHHH--HSSCBGGGTBCTTSEEETTTTTTS-------HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHT
T ss_pred ccCCCc--CCCCCCcccCCHHHHHHHhhhhhh-------ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HcC
Confidence 876643 357899999998864322110000 001123458999999999999999999999887 578
Q ss_pred CcEEEEEchhHhhHHHHHHHHHHHH----cCCCEEEcCCC-CCCCcHHHHHHH
Q 039172 361 IKHLVVSGGVASNKYVRARLDRAVK----NNSLQLVCPPP-SLCTDNGVMVAW 408 (477)
Q Consensus 361 ~~~lvlsGGVA~N~~Lr~~L~~~~~----~~g~~l~~Pp~-~~ctDNGamIa~ 408 (477)
+++||++|||++|+.+|+++.+.+. ..+++++||+. .++|+.|+||..
T Consensus 158 ~k~iv~~Ggv~aN~~lr~~l~~~~~~~~~~~~i~~~Fp~~~~y~galGA~l~~ 210 (212)
T d2i7na2 158 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 210 (212)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCEEEEECcHhhCHHHHHHHHHHHHHHHhhCCceEEecCChhhhHHHHHHHHh
Confidence 9999999999999999999977653 45899999975 799999999875
|
| >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
| >d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1saza1 c.55.1.2 (A:1-172) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
| >d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
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| >d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
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| >d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
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| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1saza2 c.55.1.2 (A:173-375) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
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| >d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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