Citrus Sinensis ID: 039286

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MASLDNPASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVHD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
masldnpaselknvtprpsrviYFRIDIALRILLFVFSFVAILLIVTskqtnlfpvpgttfsvkipakftyfpAFIFITALTSLSAIRKLAYRKRLLLLIAFLdtfhhveiVPMMQLMLGVVASAIGAALAVAYIGLkgnshagwNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVHD
Flexible Loop (DISEMBL)
masldnpaselknvtprpsrvIYFRIDIALRILLFVFSFVAILLIVTskqtnlfpvPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTytlykgvhd
Low Complexity Region (SEG)
MASLDNPASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSairklayrkrlllliaFLDTFHHVEIVPMMQLMlgvvasaigaalavayiglKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVHD
Disordered region (IsUnstruct)
*******************RVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKG***
Disordered Region (DISOPRED)
*************************IDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKG***
Disordered Region (DISEMBL)
************NVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVHD
Disordered Region (DISPRO)
******************SRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGV**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASLDNPASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVHD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	191	2.2.26 [Sep-21-2011]
B9HMP5	196	CASP-like protein POPTRDR	yes	no	0.926	0.903	0.427	2e-30
C6SVQ5	193	CASP-like protein 7 OS=Gl	yes	no	0.910	0.901	0.398	3e-28
C6SXZ3	193	CASP-like protein 8 OS=Gl	no	no	0.910	0.901	0.388	8e-26
B9RT03	201	CASP-like protein RCOM_06	N/A	no	0.931	0.885	0.419	2e-22
Q9SQU2	199	CASP-like protein At3g063	yes	no	0.785	0.753	0.360	4e-22
D7L5G6	200	CASP-like protein ARALYDR	N/A	no	0.790	0.755	0.352	6e-22
D2KQI6	194	CASP-like protein Ni6 OS=	N/A	no	0.858	0.845	0.364	5e-21
D7MAF7	194	CASP-like protein ARALYDR	N/A	no	0.785	0.773	0.393	6e-20
Q6YT98	207	CASP-like protein Os07g04	yes	no	0.905	0.835	0.334	9e-20
A7NW79	208	CASP-like protein VIT_05s	yes	no	0.795	0.730	0.412	1e-19

>sp|B9HMP5|CSPLD_POPTR CASP-like protein POPTRDRAFT_820933 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=1

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 117/206 (56%), Gaps = 29/206 (14%)

Query: 1   MASLDNPASE----LKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPV 56
           MAS D P  E     +     P R  Y  + +ALR LLF  S  A++++VT+KQT + PV
Sbjct: 1   MASTDKPDRESIKSEEAPAAHPRRSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPV 60

Query: 57  PGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFL 103
           PG   SV + AKF+  PAFI+             +T L ++S + K AY  R LL  A L
Sbjct: 61  PGFPISVPLEAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALL 120

Query: 104 DTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATA 163
           D            LMLG+VASA GAA  VAY+GLKGNSH  W KV N  YDKF +H  ++
Sbjct: 121 DV-----------LMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCNV-YDKFCQHVGSS 168

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++FA   LV LTM S +++Y+ +
Sbjct: 169 IAVALFASVLLVLLTMLSVFSIYRKI 194

Populus trichocarpa (taxid: 3694)

>sp|C6SVQ5|CSPL7_SOYBN CASP-like protein 7 OS=Glycine max PE=2 SV=1

 Score =  124 bits (312), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 111/206 (53%), Gaps = 32/206 (15%)

Query: 1   MASLDNPASELK---NVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP 57
           MAS D P  + +   + TP P+ V YF+ D+ LR LLF  S VA+++IVT+ QT +  VP
Sbjct: 1   MASTDKPGGDPEYRTSSTPAPAGVDYFKFDVILRFLLFAASLVAVVVIVTANQTEVIRVP 60

Query: 58  GTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLD 104
                V  PAKF Y PAF++             IT L SL A  K A + +LLL     D
Sbjct: 61  Q---PVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLLASNKPALKTKLLLYFILWD 117

Query: 105 TFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSH-AGWNKVANAGYDKFIKHTATA 163
                       L+LG++ASA G A  VAY+GLKGN H  GWNK+ +  YDKF +H   +
Sbjct: 118 A-----------LILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHV-YDKFCRHVGAS 165

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++F     V L   S Y+++  V
Sbjct: 166 IAVALFGSVVTVLLIWLSAYSIHSRV 191

Glycine max (taxid: 3847)

>sp|C6SXZ3|CSPL8_SOYBN CASP-like protein 8 OS=Glycine max PE=2 SV=1

 Score =  116 bits (291), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 32/206 (15%)

Query: 1   MASLDNPAS---ELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP 57
           MAS D          + TP P+ V YF+ D+ LR +LF  S VA+++IVT  QT +  VP
Sbjct: 1   MASTDKHGDTEYRTSSSTPAPAGVDYFKFDVILRFVLFAASLVAVVVIVTGNQTEVILVP 60

Query: 58  GTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLD 104
                V  PAKF Y PAF++             IT L SL A  K A + +LL      D
Sbjct: 61  Q---PVPWPAKFRYTPAFVYFVAALSVTGLYSIITTLASLFASNKPALKTKLLPYFILWD 117

Query: 105 TFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSH-AGWNKVANAGYDKFIKHTATA 163
                       L+LG++ASA G A  VAY+GLKGNSH  GWNK+ +  YDKF +H   +
Sbjct: 118 -----------ALILGIIASATGTAGGVAYLGLKGNSHVVGWNKICHV-YDKFCRHVGAS 165

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++F     V L   S Y+++  V
Sbjct: 166 IAVALFGSIVTVLLIWLSAYSIHSRV 191

Glycine max (taxid: 3847)

>sp|B9RT03|CSPL5_RICCO CASP-like protein RCOM_0679870 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 111/210 (52%), Gaps = 32/210 (15%)

Query: 1   MASLDNPASE-LKNVTPRPS-----RVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLF 54
           MAS D P  E +K+  P+P      R  YF +D+ LR+ LF  +  AI+++ T+KQT L 
Sbjct: 1   MASTDKPDPEAIKSEVPQPPPPAPLRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELA 60

Query: 55  PVPGTT-FSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLI 100
           PVPG     V + AKF + PAFI+             IT L SL  I K  Y  + L   
Sbjct: 61  PVPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIITTLASLGVIAKPIYATKFLFYY 120

Query: 101 AFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHT 160
           A  D            LMLG+VA+A GAA  VAYIGLKGNSH  W K+ N  YD F KH 
Sbjct: 121 ALWDV-----------LMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICNV-YDTFCKHV 168

Query: 161 ATAIALSIFAVTDLVTLTMHSTYTLYKGVH 190
            +A+A+S+ A   LV L M S  +LY  V 
Sbjct: 169 GSALAISLAASVVLVLLIMLSVCSLYSRVR 198

Ricinus communis (taxid: 3988)

>sp|Q9SQU2|CSPLD_ARATH CASP-like protein At3g06390 OS=Arabidopsis thaliana GN=At3g06390 PE=2 SV=1

 Score =  104 bits (259), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 36/186 (19%)

Query: 1   MASLDNPASEL-------KNVTPRPSRVIYF----RIDIALRILLFVFSFVAILLIVTSK 49
           MAS +NP  E         + TP PS    F    +IDI  R+LLF  +  A++++VTS 
Sbjct: 1   MASTENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSD 60

Query: 50  QTNLFPVPGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRL 96
           QT +  +PG +    + A+F   PAFI+             I+ L S+S + K  +  + 
Sbjct: 61  QTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQF 120

Query: 97  LLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKF 156
            + +A LD            +MLG++ASA G A  VAYI LKGN   GWNK+ N  YDKF
Sbjct: 121 SIYLASLD-----------MVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV-YDKF 168

Query: 157 IKHTAT 162
            ++ AT
Sbjct: 169 CRYIAT 174

Arabidopsis thaliana (taxid: 3702)

>sp|D7L5G6|CSPLD_ARALL CASP-like protein ARALYDRAFT_477942 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477942 PE=3 SV=1

 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 36/187 (19%)

Query: 1   MASLDNPASELKN--------VTPRPSRVIYF---RIDIALRILLFVFSFVAILLIVTSK 49
           MAS +NP  E            TP PS   +    +ID+ +R+LLF  +  A++++VTS 
Sbjct: 1   MASTENPDPETGKSEPIPASATTPPPSAASFLDCRKIDVIIRVLLFSATLTALIVMVTSD 60

Query: 50  QTNLFPVPGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRL 96
           QT    +PG +    + A+F   PAFIF             ++ L S+S + K  +  R+
Sbjct: 61  QTEKTQLPGVSSPAPVSAEFNDSPAFIFFVVALVVTSFYALMSTLVSISLLLKPEFTARV 120

Query: 97  LLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKF 156
            + +A LD            +MLG++ASA G A  VAYI LKGN   GWNK+ N  YDKF
Sbjct: 121 SVYLASLD-----------MVMLGILASATGTAGGVAYIALKGNKEVGWNKICNV-YDKF 168

Query: 157 IKHTATA 163
            ++ AT+
Sbjct: 169 CRYIATS 175

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|D2KQI6|CSPL1_BETVM CASP-like protein Ni6 OS=Beta vulgaris subsp. maritima GN=Ni6 PE=2 SV=1

 Score =  100 bits (249), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 31/195 (15%)

Query: 7   PASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP-GTTFSVKI 65
           P  +   V P  ++  Y  +D+ LR+LL   S  +++L+VTSKQT +   P G+  +   
Sbjct: 12  PTPQAPPVAPTDNK--YRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFGSRPNA-- 67

Query: 66  PAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIV 112
            AKF   PAFI+             ITAL SLS +RK     +L  ++   D        
Sbjct: 68  -AKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDV------- 119

Query: 113 PMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVT 172
               L+LG+VA+A G A  V YIGLKGN+H  W K+ N  YDKF +H   +I +S+FA  
Sbjct: 120 ----LLLGIVAAATGTAGGVGYIGLKGNTHVRWGKIRNV-YDKFCRHVGASIIVSLFAAA 174

Query: 173 DLVTLTMHSTYTLYK 187
            LV L   +  +LY+
Sbjct: 175 VLVLLVFVNANSLYR 189

Beta vulgaris subsp. maritima (taxid: 350892)

>sp|D7MAF7|CSPL6_ARALL CASP-like protein ARALYDRAFT_915236 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915236 PE=3 SV=1

 Score = 97.1 bits (240), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 28/178 (15%)

Query: 27  DIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA-KFTYFPAFI-FITALT-- 82
            + LR +LF  +  +I+++VTSKQT    +PGT   ++IPA KFT  PA I F+ AL+  
Sbjct: 31  QVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGT--PIRIPAAKFTNSPALIYFVVALSVA 88

Query: 83  ----------SLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAV 132
                     ++SA +K +    LLL +A +D            +M+G+VASA GA   V
Sbjct: 89  CFYSIVSTFVTVSAFKKHSCSAILLLNLAIMD-----------AVMVGIVASATGAGGGV 137

Query: 133 AYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGVH 190
           AY+GLKGN    W K+ N  YDKF +H   AIA+S+FA   L+ L++ S  +LYK + 
Sbjct: 138 AYLGLKGNKEVRWGKICNI-YDKFCRHVGGAIAVSLFASVILLLLSIISVLSLYKKIR 194

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q6YT98|CSPL7_ORYSJ CASP-like protein Os07g0442900 OS=Oryza sativa subsp. japonica GN=Os07g0442900 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 45/218 (20%)

Query: 1   MASLDN---PASELKNVT------------PRPSRVIYFRIDIALRILLFVFSFVAILLI 45
           MA++D    P+S  K  T            P P++      ++ALR LLF  S  A++++
Sbjct: 1   MATVDGTTAPSSGGKTATVALESGGGRYGGPAPAKC--SGANLALRALLFAVSLSALVVL 58

Query: 46  VTSKQTNLFPV---PGTTFSVKIPAKFTYFPAFIFITA----------LTSLSAIRKL-- 90
           VT+KQT + P    P       +PAK+T+ PA I++ A          +T++S++R L  
Sbjct: 59  VTAKQTVMVPFVIRPPQFILAPVPAKYTHSPALIYLLAALCATCFYSLITAISSVRLLSS 118

Query: 91  -AYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVA 149
            A   + L  +  LD F+             V+ASA G A AVA++GLKGNSH  WNK+ 
Sbjct: 119 SACSAKTLFYLILLDVFYAA-----------VMASATGTAGAVAWVGLKGNSHTRWNKIC 167

Query: 150 NAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYK 187
           N  Y KF +H  ++  L++ A   LV L   + Y+LY+
Sbjct: 168 NV-YGKFCRHIGSSTFLALIAAIVLVLLAFLNAYSLYR 204

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A7NW79|CSPL7_VITVI CASP-like protein VIT_05s0020g01830 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 94/177 (53%), Gaps = 25/177 (14%)

Query: 23  YFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIF----- 77
           Y  +D+ LRILL   +  +++++VTS QT L  V G    V   AKF   PAFI+     
Sbjct: 39  YSALDVVLRILLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAAL 98

Query: 78  --------ITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAA 129
                   IT L S   I K +   + +L +A  D            LMLG+ ASA G A
Sbjct: 99  SVVGLYSIITTLASFIFISKPSCSTKTILHLAIWDV-----------LMLGLAASATGTA 147

Query: 130 LAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLY 186
             VAY+GLKGNSH GWNKV N  YDKF +H   +IA+++FA   LV L   S +TLY
Sbjct: 148 GGVAYVGLKGNSHVGWNKVCNT-YDKFCRHVGGSIAVALFASILLVLLVWLSLFTLY 203

Vitis vinifera (taxid: 29760)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224102631	196	predicted protein [Populus trichocarpa]	0.926	0.903	0.427	9e-29
351726435	193	CASP-like protein 7 [Glycine max] gi|288	0.910	0.901	0.398	1e-26
388503428	190	unknown [Lotus japonicus]	0.884	0.889	0.394	3e-25
351721899	193	CASP-like protein 8 [Glycine max] gi|288	0.910	0.901	0.388	4e-24
356549065	189	PREDICTED: CASP-like protein 7-like [Gly	0.900	0.910	0.387	4e-23
255551653	201	conserved hypothetical protein [Ricinus	0.931	0.885	0.419	8e-21
15230708	199	uncharacterized protein [Arabidopsis tha	0.785	0.753	0.360	2e-20
297833388	200	integral membrane family protein [Arabid	0.790	0.755	0.352	3e-20
414588847	190	TPA: hypothetical protein ZEAMMB73_67291	0.774	0.778	0.386	2e-19
341958524	194	RecName: Full=CASP-like protein Ni6 gi|2	0.858	0.845	0.364	3e-19

>gi|224102631|ref|XP_002312755.1| predicted protein [Populus trichocarpa] gi|341958560|sp|B9HMP5.1|CSPLD_POPTR RecName: Full=CASP-like protein POPTRDRAFT_820933 gi|222852575|gb|EEE90122.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 117/206 (56%), Gaps = 29/206 (14%)

Query: 1   MASLDNPASE----LKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPV 56
           MAS D P  E     +     P R  Y  + +ALR LLF  S  A++++VT+KQT + PV
Sbjct: 1   MASTDKPDRESIKSEEAPAAHPRRSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPV 60

Query: 57  PGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFL 103
           PG   SV + AKF+  PAFI+             +T L ++S + K AY  R LL  A L
Sbjct: 61  PGFPISVPLEAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALL 120

Query: 104 DTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATA 163
           D            LMLG+VASA GAA  VAY+GLKGNSH  W KV N  YDKF +H  ++
Sbjct: 121 DV-----------LMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCNV-YDKFCQHVGSS 168

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++FA   LV LTM S +++Y+ +
Sbjct: 169 IAVALFASVLLVLLTMLSVFSIYRKI 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726435|ref|NP_001238662.1| CASP-like protein 7 [Glycine max] gi|288559198|sp|C6SVQ5.1|CSPL7_SOYBN RecName: Full=CASP-like protein 7 gi|255625967|gb|ACU13328.1| unknown [Glycine max]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 111/206 (53%), Gaps = 32/206 (15%)

Query: 1   MASLDNPASELK---NVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP 57
           MAS D P  + +   + TP P+ V YF+ D+ LR LLF  S VA+++IVT+ QT +  VP
Sbjct: 1   MASTDKPGGDPEYRTSSTPAPAGVDYFKFDVILRFLLFAASLVAVVVIVTANQTEVIRVP 60

Query: 58  GTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLD 104
                V  PAKF Y PAF++             IT L SL A  K A + +LLL     D
Sbjct: 61  Q---PVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLLASNKPALKTKLLLYFILWD 117

Query: 105 TFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSH-AGWNKVANAGYDKFIKHTATA 163
                       L+LG++ASA G A  VAY+GLKGN H  GWNK+ +  YDKF +H   +
Sbjct: 118 A-----------LILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHV-YDKFCRHVGAS 165

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++F     V L   S Y+++  V
Sbjct: 166 IAVALFGSVVTVLLIWLSAYSIHSRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503428|gb|AFK39780.1| unknown [Lotus japonicus]

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 110/208 (52%), Gaps = 39/208 (18%)

Query: 1   MASLD---NPASELKNVTPRPS---RVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLF 54
           MAS D   +P   L + TP P+    V YF  D+ LR LLF  S VA++++VTS QT   
Sbjct: 1   MASRDKTEDPEHRLSS-TPIPAPAAGVDYFHFDLILRFLLFASSLVAVVVMVTSNQTEYV 59

Query: 55  PVPGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIA 101
           P+P        PAKF Y PAFI+             +TAL SLS IRK A + + LL   
Sbjct: 60  PLPR-------PAKFRYSPAFIYFVAAFSVSGLYSILTALASLSVIRKPALKTKFLLYFL 112

Query: 102 FLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTA 161
           F D            L+LG++ASA G A  VAY+GLKGN+H GW+K+ N  YDK+ +H  
Sbjct: 113 FWDA-----------LILGILASATGTAGGVAYVGLKGNNHVGWHKICNV-YDKYCRHVG 160

Query: 162 TAIALSIFAVTDLVTLTMHSTYTLYKGV 189
            +I + +      V L   S ++L+  V
Sbjct: 161 GSIGVGLVGSIVSVLLVWLSAFSLHSRV 188

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721899|ref|NP_001237481.1| CASP-like protein 8 [Glycine max] gi|288559102|sp|C6SXZ3.1|CSPL8_SOYBN RecName: Full=CASP-like protein 8 gi|255627543|gb|ACU14116.1| unknown [Glycine max]

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 32/206 (15%)

Query: 1   MASLDNPAS---ELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP 57
           MAS D          + TP P+ V YF+ D+ LR +LF  S VA+++IVT  QT +  VP
Sbjct: 1   MASTDKHGDTEYRTSSSTPAPAGVDYFKFDVILRFVLFAASLVAVVVIVTGNQTEVILVP 60

Query: 58  GTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLD 104
                V  PAKF Y PAF++             IT L SL A  K A + +LL      D
Sbjct: 61  Q---PVPWPAKFRYTPAFVYFVAALSVTGLYSIITTLASLFASNKPALKTKLLPYFILWD 117

Query: 105 TFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSH-AGWNKVANAGYDKFIKHTATA 163
                       L+LG++ASA G A  VAY+GLKGNSH  GWNK+ +  YDKF +H   +
Sbjct: 118 -----------ALILGIIASATGTAGGVAYLGLKGNSHVVGWNKICHV-YDKFCRHVGAS 165

Query: 164 IALSIFAVTDLVTLTMHSTYTLYKGV 189
           IA+++F     V L   S Y+++  V
Sbjct: 166 IAVALFGSIVTVLLIWLSAYSIHSRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549065|ref|XP_003542918.1| PREDICTED: CASP-like protein 7-like [Glycine max]

 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 111/204 (54%), Gaps = 32/204 (15%)

Query: 1   MASLDNPASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTN--LFPVPG 58
           MA+ D P ++   +   P+ V Y ++D+ LR LL   S VA+ +IV+S QT   LF    
Sbjct: 1   MATTD-PENKSPTLPLPPAEVDYSKVDVILRFLLLAASVVALAVIVSSDQTEQVLF---- 55

Query: 59  TTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLDT 105
               +  PAKF Y PAF++             ++AL S+S I+K  ++ + LL   F D 
Sbjct: 56  QDVLLPQPAKFKYSPAFVYFVAAFSVSGLYALVSALASISVIQKPGFKLKFLLHFIFWDA 115

Query: 106 FHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIA 165
                      L+LG+ ASA GAA +VAYIGLKGNSH GW KV N  YDKF +H A +IA
Sbjct: 116 -----------LILGITASATGAAGSVAYIGLKGNSHVGWIKVCNI-YDKFCRHLAGSIA 163

Query: 166 LSIFAVTDLVTLTMHSTYTLYKGV 189
           +++F     V L   S +T++  V
Sbjct: 164 VALFGSIVTVLLIWLSAFTIHSRV 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551653|ref|XP_002516872.1| conserved hypothetical protein [Ricinus communis] gi|238055376|sp|B9RT03.1|CSPL5_RICCO RecName: Full=CASP-like protein RCOM_0679870 gi|223543960|gb|EEF45486.1| conserved hypothetical protein [Ricinus communis]

 Score =  105 bits (262), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 111/210 (52%), Gaps = 32/210 (15%)

Query: 1   MASLDNPASE-LKNVTPRPS-----RVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLF 54
           MAS D P  E +K+  P+P      R  YF +D+ LR+ LF  +  AI+++ T+KQT L 
Sbjct: 1   MASTDKPDPEAIKSEVPQPPPPAPLRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELA 60

Query: 55  PVPGTT-FSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLI 100
           PVPG     V + AKF + PAFI+             IT L SL  I K  Y  + L   
Sbjct: 61  PVPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIITTLASLGVIAKPIYATKFLFYY 120

Query: 101 AFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHT 160
           A  D            LMLG+VA+A GAA  VAYIGLKGNSH  W K+ N  YD F KH 
Sbjct: 121 ALWDV-----------LMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICNV-YDTFCKHV 168

Query: 161 ATAIALSIFAVTDLVTLTMHSTYTLYKGVH 190
            +A+A+S+ A   LV L M S  +LY  V 
Sbjct: 169 GSALAISLAASVVLVLLIMLSVCSLYSRVR 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230708|ref|NP_187290.1| uncharacterized protein [Arabidopsis thaliana] gi|75207271|sp|Q9SQU2.1|CSPLD_ARATH RecName: Full=CASP-like protein At3g06390 gi|6437548|gb|AAF08575.1|AC011623_8 unknown protein [Arabidopsis thaliana] gi|28393130|gb|AAO41998.1| unknown protein [Arabidopsis thaliana] gi|28973636|gb|AAO64140.1| unknown protein [Arabidopsis thaliana] gi|332640864|gb|AEE74385.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 36/186 (19%)

Query: 1   MASLDNPASEL-------KNVTPRPSRVIYF----RIDIALRILLFVFSFVAILLIVTSK 49
           MAS +NP  E         + TP PS    F    +IDI  R+LLF  +  A++++VTS 
Sbjct: 1   MASTENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSD 60

Query: 50  QTNLFPVPGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRL 96
           QT +  +PG +    + A+F   PAFI+             I+ L S+S + K  +  + 
Sbjct: 61  QTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQF 120

Query: 97  LLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKF 156
            + +A LD            +MLG++ASA G A  VAYI LKGN   GWNK+ N  YDKF
Sbjct: 121 SIYLASLD-----------MVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV-YDKF 168

Query: 157 IKHTAT 162
            ++ AT
Sbjct: 169 CRYIAT 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833388|ref|XP_002884576.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|341958559|sp|D7L5G6.1|CSPLD_ARALL RecName: Full=CASP-like protein ARALYDRAFT_477942 gi|297330416|gb|EFH60835.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 36/187 (19%)

Query: 1   MASLDNPASELKN--------VTPRPSRVIYF---RIDIALRILLFVFSFVAILLIVTSK 49
           MAS +NP  E            TP PS   +    +ID+ +R+LLF  +  A++++VTS 
Sbjct: 1   MASTENPDPETGKSEPIPASATTPPPSAASFLDCRKIDVIIRVLLFSATLTALIVMVTSD 60

Query: 50  QTNLFPVPGTTFSVKIPAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRL 96
           QT    +PG +    + A+F   PAFIF             ++ L S+S + K  +  R+
Sbjct: 61  QTEKTQLPGVSSPAPVSAEFNDSPAFIFFVVALVVTSFYALMSTLVSISLLLKPEFTARV 120

Query: 97  LLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKF 156
            + +A LD            +MLG++ASA G A  VAYI LKGN   GWNK+ N  YDKF
Sbjct: 121 SVYLASLD-----------MVMLGILASATGTAGGVAYIALKGNKEVGWNKICNV-YDKF 168

Query: 157 IKHTATA 163
            ++ AT+
Sbjct: 169 CRYIATS 175

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414588847|tpg|DAA39418.1| TPA: hypothetical protein ZEAMMB73_672916 [Zea mays]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 15/163 (9%)

Query: 27  DIALRILLFVFSFVAILLIVTSKQTNLFPVPGT-TFSVKIPAKFTYFPAFIFI-TALTSL 84
           D+ALR+LLF  +   ++++ T+KQT   PVP      + +PAKF   PA I + TA TSL
Sbjct: 38  DLALRVLLFAVTLSGLVVLATAKQTVRVPVPQIPGLVLSLPAKFKDSPALILLSTAFTSL 97

Query: 85  SAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAG 144
             +   +  + L LL+ F D F+             ++ASA G+A  VA+IGLKGNSH  
Sbjct: 98  KLLSGSSPSRTLFLLVLF-DVFYAA-----------IMASATGSAGGVAWIGLKGNSHTN 145

Query: 145 WNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYK 187
           WNK+ N  Y KF +H  +++ L + A   LV LT+ + ++LY+
Sbjct: 146 WNKICNI-YSKFCRHIGSSVFLGLIASVVLVLLTILNAHSLYR 187

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341958524|sp|D2KQI6.1|CSPL1_BETMR RecName: Full=CASP-like protein Ni6 gi|281494397|gb|ADA71986.1| Ni6 protein [Beta vulgaris subsp. maritima]

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 31/195 (15%)

Query: 7   PASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVP-GTTFSVKI 65
           P  +   V P  ++  Y  +D+ LR+LL   S  +++L+VTSKQT +   P G+  +   
Sbjct: 12  PTPQAPPVAPTDNK--YRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFGSRPNA-- 67

Query: 66  PAKFTYFPAFIF-------------ITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIV 112
            AKF   PAFI+             ITAL SLS +RK     +L  ++   D        
Sbjct: 68  -AKFQNSPAFIYLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDV------- 119

Query: 113 PMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVT 172
               L+LG+VA+A G A  V YIGLKGN+H  W K+ N  YDKF +H   +I +S+FA  
Sbjct: 120 ----LLLGIVAAATGTAGGVGYIGLKGNTHVRWGKIRNV-YDKFCRHVGASIIVSLFAAA 174

Query: 173 DLVTLTMHSTYTLYK 187
            LV L   +  +LY+
Sbjct: 175 VLVLLVFVNANSLYR 189

Source: Beta vulgaris subsp. maritima

Species: Beta vulgaris

Genus: Beta

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
TAIR|locus:2081091	199	AT3G06390 "AT3G06390" [Arabido	0.937	0.899	0.312	2e-17
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.827	0.818	0.307	2.1e-13

TAIR|locus:2081091 AT3G06390 "AT3G06390" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 61/195 (31%), Positives = 89/195 (45%)

Query:     1 MASLDNPASEL-------KNVTPRPSRVIYF----RIDIALRILLFVFSFVAILLIVTSK 49
             MAS +NP  E         + TP PS    F    +IDI  R+LLF  +  A++++VTS 
Sbjct:     1 MASTENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSD 60

Query:    50 QTNLFPVPGTTFSVKIPAKFTYFPAFI-FITALTSLSXXXXXXXXXXXXXXXX--FLDTF 106
             QT +  +PG +    + A+F   PAFI F+ AL   S                  F   F
Sbjct:    61 QTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQF 120

Query:   107 HHVEIVPMMQLMXXXXXXXXXXXXXXXXXXXKGNSHAGWNKVANAGYDKFIKHTATAIAL 166
               + +  +  +M                   KGN   GWNK+ N  YDKF ++ AT++AL
Sbjct:   121 S-IYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV-YDKFCRYIATSLAL 178

Query:   167 SIFAVTDLVTLTMHS 181
             S+FA   L+ L++ S
Sbjct:   179 SLFASLLLLVLSIWS 193

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 51/166 (30%), Positives = 79/166 (47%)

Query:    28 IALRILLFVFSFVAILLIVTSKQT-NLFPVPGTTFSVKIPA-KFTYFPAFI-FITALT-S 83
             + LR +LF  +  +I+++VTSKQT N+F +PGT   ++IPA +FT  PA I F+ AL+ +
Sbjct:    31 VVLRFVLFAATLTSIVVMVTSKQTKNIF-LPGTP--IRIPAAEFTNSPALIYFVVALSVA 87

Query:    84 LSXXXXXXXXXXXXXXXXFLDTFHHVEIVPMMQLMXXXXXXXXXXXXXXXXXXXKGNSHA 143
                                      + +  M  +M                   KGN   
Sbjct:    88 CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 147

Query:   144 GWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGV 189
              W K+ +  YDKF +H   AIA+S+FA   L+ L++ S  +LYK +
Sbjct:   148 RWGKICHI-YDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKI 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.138   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       156   0.00073  106 3  11 22  0.39    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  537 (57 KB)
  Total size of DFA:  123 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.05u 0.08s 11.13t   Elapsed:  00:00:01
  Total cpu time:  11.05u 0.08s 11.13t   Elapsed:  00:00:02
  Start:  Tue May 21 02:31:17 2013   End:  Tue May 21 02:31:19 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6YT98	CSPL7_ORYSJ	No assigned EC number	0.3348	0.9057	0.8357	yes	no
C6SVQ5	CSPL7_SOYBN	No assigned EC number	0.3980	0.9109	0.9015	yes	no
B9HMP5	CSPLD_POPTR	No assigned EC number	0.4271	0.9267	0.9030	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VIII1846 hypothetical protein (196 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	191
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-19
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	7e-18

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 80.4 bits (199), Expect = 1e-19
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 32/161 (19%)

Query: 25  RIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITALTSL 84
             ++ LR+  FV +  A +++ T+KQT  F      F ++  A F+  PAF ++    ++
Sbjct: 6   LAELVLRLAAFVLALAAAVVMGTNKQTKPF------FFIQKKASFSDLPAFRYLVVANAI 59

Query: 85  SA--------------IRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAAL 130
           +A               RK    K L  L+  LD           Q+M  ++ +A  AA 
Sbjct: 60  AAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILD-----------QVMAYLLLAAASAAA 108

Query: 131 AVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAV 171
           A+ Y+   GNSHA W K+ N  + +F    A ++ALS  A 
Sbjct: 109 AIVYLARNGNSHANWMKICN-QFGRFCNRAAASVALSFLAF 148

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 75.9 bits (187), Expect = 7e-18
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 30/167 (17%)

Query: 28  IALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIF---------- 77
           + LR+L F  +  A +++ T+++T +  V   TF     AKF+  PAF++          
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFK----AKFSDLPAFVYFVVANAIACG 56

Query: 78  ---ITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAY 134
              ++ + S+  + K     +L+ L  FLD            +ML +++S   AA AVAY
Sbjct: 57  YSLLSLVVSIFGLLKRRVFFKLIAL-FFLD-----------LVMLALLSSGTSAAAAVAY 104

Query: 135 IGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHS 181
           +G  GN  AGW K+    + KF    A ++ALS+FAV  LV L++ S
Sbjct: 105 VGKLGNKEAGWLKICGV-FGKFCDRIAGSLALSLFAVILLVLLSILS 150

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	96.15

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=3.5e-38  Score=253.95  Aligned_cols=141  Identities=36%  Similarity=0.545  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccceeecCCCcceeeEeEEEeecchhHHHHH------HHHHH-------Hhhccccch
Q 039286           28 IALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFITA------LTSLS-------AIRKLAYRK   94 (191)
Q Consensus        28 l~LR~la~~~sl~A~vvM~t~~qt~~~~~~~~~~~~~~~ak~~d~~Af~yl~~------~~S~~-------~~~~~~~~~   94 (191)
                      ++||+++++++++|+++|+|||||.++..    +.+++++||+|+++|+|++.      .|++.       .+++++ ..
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~----~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~-~~   75 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFV----QLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRR-VF   75 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeec----ccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ch
Confidence            46999999999999999999999998721    13788999999999999743      35541       122222 22


Q ss_pred             hhhhhhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCchhhhhhhhhhHhhHHHHHHHHHHHHHHHH
Q 039286           95 RLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDL  174 (191)
Q Consensus        95 ~~~w~~f~~D~~~~~~~~~~~~v~~yll~Sa~aAA~av~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l  174 (191)
                      ...|++|++||           +++|+++||++||++++|++++||+|++|+|+|++ |++||||+++|++++|+|++++
T Consensus        76 ~~~~~~f~~D~-----------v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~-~~~FC~~~~~sl~~s~~a~v~~  143 (154)
T TIGR01569        76 FKLIALFFLDL-----------VMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGV-FGKFCDRIAGSLALSLFAVILL  143 (154)
T ss_pred             hHHHHHHHHhH-----------HHHHHHHHHHHHHHHHHHHHHccccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            45899999999           99999999999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHhHhh
Q 039286          175 VTLTMHSTYTL  185 (191)
Q Consensus       175 ~~ls~lSa~~L  185 (191)
                      ++++++|++++
T Consensus       144 ~llsv~Sa~~~  154 (154)
T TIGR01569       144 VLLSILSAISL  154 (154)
T ss_pred             HHHHHHHHhcC
Confidence            99999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=3.2e-33  Score=222.68  Aligned_cols=135  Identities=37%  Similarity=0.566  Sum_probs=119.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccccceeecCCCcceeeEeEEEeecchhHHHH------HHHHHH-------Hh
Q 039286           21 VIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFIT------ALTSLS-------AI   87 (191)
Q Consensus        21 ~~~~~~~l~LR~la~~~sl~A~vvM~t~~qt~~~~~~~~~~~~~~~ak~~d~~Af~yl~------~~~S~~-------~~   87 (191)
                      |..+.++++||+++++++++|+++|++|+||.++      ..++++++|+|+++|+|++      ++|++.       .+
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~------~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~   74 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSV------FSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSL   74 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCccee------eccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999988      3678899999999999973      346641       12


Q ss_pred             -hccccchhhhhhhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCchhhhhhhhhhHhhHHHHHHHH
Q 039286           88 -RKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIAL  166 (191)
Q Consensus        88 -~~~~~~~~~~w~~f~~D~~~~~~~~~~~~v~~yll~Sa~aAA~av~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~l  166 (191)
                       +++..++...|++|++||           +++|+++||++||++++|++++||+|++|+++|+. |++||+|+++|+++
T Consensus        75 ~~~~~~~~~~~~~~f~~Dq-----------v~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~-~~~FC~~~~~sv~l  142 (149)
T PF04535_consen   75 SRGKLRSKLLAWFLFILDQ-----------VLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQ-FGKFCNRAAASVAL  142 (149)
T ss_pred             HccCCcccchhhhhhhHHH-----------HHHHHHHHHHHHHHHHHHHHHhccccccchhhccc-hhhHHHHHHHHHHH
Confidence             222345678999999999           99999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHHHH
Q 039286          167 SIFAVTD  173 (191)
Q Consensus       167 sflA~~~  173 (191)
                      +|+|+++
T Consensus       143 sf~a~~~  149 (149)
T PF04535_consen  143 SFLAFVA  149 (149)
T ss_pred             HHHHHHC
Confidence            9999864

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=96.15  E-value=0.037  Score=42.18  Aligned_cols=129  Identities=19%  Similarity=0.020  Sum_probs=77.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccccceeecCCCcceeeEeEEEeecchhHHH--HHH----HHH----HHh-h-ccc
Q 039286           24 FRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIFI--TAL----TSL----SAI-R-KLA   91 (191)
Q Consensus        24 ~~~~l~LR~la~~~sl~A~vvM~t~~qt~~~~~~~~~~~~~~~ak~~d~~Af~yl--~~~----~S~----~~~-~-~~~   91 (191)
                      +....++|++-++++++...+++....+...            ......+...|.  +..    +++    ..+ + +..
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~   70 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGSQ------------IYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYR   70 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhcccc------------ccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3467899999999999999999887743221            111223334442  111    221    111 1 112


Q ss_pred             cchhhhhhhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCchhhhhhhhhhHhhHHHHHHHHHHHHH
Q 039286           92 YRKRLLLLIAFLDTFHHVEIVPMMQLMLGVVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAV  171 (191)
Q Consensus        92 ~~~~~~w~~f~~D~~~~~~~~~~~~v~~yll~Sa~aAA~av~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~  171 (191)
                      .+....+..+..|.           ++..+-+.+..+-+.-....+.+++   ++..+.. .++-|+...++.+++++..
T Consensus        71 ~~~~~~~~~~~~~~-----------v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~-~~~~~~~~~Aa~~f~~~~~  135 (144)
T PF01284_consen   71 PRIPWPLVEFIFDA-----------VFAILWLAAFIALAAYLSDHSCSNT---GNDYSYS-GCSRCGAWKAAAAFGFLNW  135 (144)
T ss_pred             cccccchhHHHHHH-----------HHHHHHHHHHHHHHHHhcCcccccC---CCCcCCC-CCCcchhHHHHHHHHHHHH
Confidence            23344566788999           8888888765443333222112211   3333445 6788999999999999999


Q ss_pred             HHHHHHHH
Q 039286          172 TDLVTLTM  179 (191)
Q Consensus       172 ~~l~~ls~  179 (191)
                      +.++....
T Consensus       136 ~l~~~s~~  143 (144)
T PF01284_consen  136 LLFIVSAV  143 (144)
T ss_pred             HHHHHHHH
Confidence            98887654

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00