Citrus Sinensis ID: 039379

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
HQLPIPKSAVHIQSSASQPHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVHHD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEEEEEEccccEEEEEEEcccEEEEEEcccEEEEEEEEcccEEEcccccEEEEEEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEEEEEEEEEEEccEEEEEEccEEEEEEcccccccccccccccccccEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccEEEEEEEEEEEEEccccEEEEEEEcEEEEEEEEcccEEEEcccccccccccccccccEccEEcHcccccHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEEccEcccEEEEEEEEccEEEEEEccccccccccccccccccEEccc
Coil and Loop (DISEMBL)
hqlpipksavhiqssasqphsnshssYFVRRLIIALVLLFVLASVISSIAWLivhplppvftvnsfTVSNFTllnsrvkgDYELVVSIknpnkkaslsidrsddvclMYDKSAAVIATAWMgplclekmgqqrqsprfrsdfcgplhagefnemsndygskrmVSFNVIMRIRVRfgyrilptkqslmKVSCTNLVAEFSAAKEIHgklkdtggknncsvhhd
Flexible Loop (DISEMBL)
HQLPIPKSAVhiqssasqphsnSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVsiknpnkkaslsidrsddVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEfnemsndygSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKeihgklkdtggknncsvhhd
Low Complexity Region (SEG)
HQLPIPKSAVHIqssasqphsnshssYfvrrliialvllfvlasvissiAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVHHD
Disordered region (IsUnstruct)
**************************YFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKM***********DFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEI******************
Disordered Region (DISOPRED)
*QLPI*********************YFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGP************YGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLV********************NC*VHH*
Disordered Region (DISEMBL)
*************************SYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKM********FRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVHHD
Disordered Region (DISPRO)
HQLPIPKSAVHIQSSASQPHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAK************NNC*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
HQLPIPKSAVHIQSSASQPHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVHHD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
224104571	233	predicted protein [Populus trichocarpa]	0.950	0.909	0.358	1e-23
357453183	214	hypothetical protein MTR_2g087080 [Medic	0.892	0.929	0.321	3e-17
356544758	218	PREDICTED: uncharacterized protein LOC10	0.834	0.853	0.329	3e-14
255583572	305	conserved hypothetical protein [Ricinus	0.905	0.662	0.265	2e-12
449534456	241	PREDICTED: uncharacterized protein LOC10	0.847	0.784	0.273	4e-12
297816524	295	hypothetical protein ARALYDRAFT_906612 [	0.766	0.579	0.285	2e-10
449445007	243	PREDICTED: uncharacterized protein At1g0	0.677	0.621	0.312	2e-09
449530299	248	PREDICTED: uncharacterized protein At1g0	0.695	0.625	0.294	2e-09
225464826	239	PREDICTED: uncharacterized protein LOC10	0.847	0.790	0.264	9e-09
15231224	300	hydroxyproline-rich glycoprotein family	0.766	0.57	0.265	2e-08

>gi|224104571|ref|XP_002313483.1| predicted protein [Populus trichocarpa] gi|222849891|gb|EEE87438.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 14/226 (6%)

Query: 2   QLPIPKSAVHIQ----SSASQP-HSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHP 56
           QLP  +S   IQ    S+A++P  S      FV RL + +V+ F +  +I  IAWL++HP
Sbjct: 15  QLPTQQS-FQIQYSSPSNATRPVGSTKRRPSFVPRLTLMVVMFFFILCLIIFIAWLVIHP 73

Query: 57  LPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVI 116
           L P   +NS +VSN T+ N +   +Y++  ++ N NKK +L +D+  +V + Y K   ++
Sbjct: 74  LDPAIRLNSLSVSNITVSNPQFAANYDIEFTVNNTNKKVNLFVDQV-EVIVNYRK--GLL 130

Query: 117 ATAWMGP-LCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVR 175
           ++  +G    L KM + R     R D    L    F ++S+++ SK++V+FNV + I   
Sbjct: 131 SSKILGKSEYLGKMSEARLKVELRRDAVCSLKDRVFKDISDEW-SKKIVNFNVKLSITAG 189

Query: 176 FGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVH 221
           F   +LPTKQ +M+  C NL  EF + K   GKL  +GGK +C VH
Sbjct: 190 FEIGVLPTKQRIMEFQCMNLTVEFFSTKGT-GKLM-SGGK-DCLVH 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453183|ref|XP_003596868.1| hypothetical protein MTR_2g087080 [Medicago truncatula] gi|87240900|gb|ABD32758.1| Harpin-induced 1 [Medicago truncatula] gi|355485916|gb|AES67119.1| hypothetical protein MTR_2g087080 [Medicago truncatula]

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 6/205 (2%)

Query: 11  HIQSSASQPHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSN 70
           H  ++AS     S +   VRRL    +LLF+  +VI +IAW ++ P    F V+S +VSN
Sbjct: 7   HTSTNASSRTPGSSTLGVVRRLTWTFILLFLTLTVIIAIAWNVMDPHKTHFRVSSISVSN 66

Query: 71  FTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMG 130
           FT+ +S +KG +E+ ++I NPNKK  + +DR   V + Y  S  +     + P+ L+K  
Sbjct: 67  FTVSDSELKGMFEVELNITNPNKKIEMIVDRF-SVSVFYG-SVGLSGAIVLQPIYLKKSS 124

Query: 131 QQRQSPRF--RSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLM 188
            Q    +F  R+      +    + + ND+ +K +V+F+V M  R+ F   I P+++  +
Sbjct: 125 DQDVKIKFSLRNSSTKSAYKAVSHGLVNDW-NKGIVNFDVKMLARIVFEAGIWPSREKFL 183

Query: 189 KVSCTNLVAEFSAAKEIHGKLKDTG 213
            + C NL   F   K++ GKL   G
Sbjct: 184 DIYCGNLDVGFVPIKDM-GKLLGIG 207

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544758|ref|XP_003540814.1| PREDICTED: uncharacterized protein LOC100784231 [Glycine max]

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 28  FVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVS 87
           F RRL + LV +FV+   I SIAWL +HP  P F + S +V+NF L +S+V+G YE+ ++
Sbjct: 17  FFRRLTLVLVSIFVIIMAIISIAWLAMHPHDPGFRLTSLSVTNFALSDSQVRGKYEVGLT 76

Query: 88  IKNPNK-KASLSIDRSDDVCLMYDKSAAVIAT-AWMGPLCLEKMGQQRQSPRFRSDFCGP 145
           I NPNK KA + + R   + L  ++  ++ A       + +EK     +S +   +    
Sbjct: 77  ITNPNKIKAQVVLHRVHTLRLYGEEWHSMAAVQQQQQTVFMEKF--TNKSVKVDMEVRDS 134

Query: 146 LHAGEFNEMSNDYGSKRMVSFN-VIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKE 204
                 + +  ++ +K +V+FN V++ ++VRF   I P+   L  V C NL  EF +  +
Sbjct: 135 RQKVVPDVLFKNW-TKGVVNFNMVVLGVKVRFQSGIWPSMDKLFDVQCMNLDVEFLSPTK 193

Query: 205 IHGKLKDTGGKNNC 218
             GKL   G   NC
Sbjct: 194 DTGKLLGIG--KNC 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583572|ref|XP_002532542.1| conserved hypothetical protein [Ricinus communis] gi|223527731|gb|EEF29836.1| conserved hypothetical protein [Ricinus communis]

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 13/215 (6%)

Query: 6   PKSAVHIQSSASQPHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNS 65
           P +  + Q   +QP    +   F+R +I  LV L +L   IS   W+I+ P+ PVF VN+
Sbjct: 90  PTAYYNTQMYQTQPECRING--FLRGIIGGLVFLLILTCAISIFMWIILRPVIPVFHVNN 147

Query: 66  FTVSNFTLLNS-RVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPL 124
            +VSNF L +S     +++  +++ NPN K  +  D+ +    +Y     ++AT++  P 
Sbjct: 148 LSVSNFNLSSSPTFHANWDANITVGNPNTKLKVYFDQIE--VFIYYNEDDLLATSFSNPF 205

Query: 125 CLEKMGQQRQSPRFRSDFCGPLHAG----EFNEMSNDYGSKRMVSFNVIMRIRVRFGYRI 180
            LE  G      +  ++      AG      ++M+ D  +   V+F++ M +   F    
Sbjct: 206 FLETGGNSVVQAKLEANNADRKQAGVGSWVVDKMAKDKSTTGNVTFDIRMALWSTFKSGS 265

Query: 181 LPTKQSLMKVSCTNLVAEF----SAAKEIHGKLKD 211
              +   ++V C +LV  F      A   +GK KD
Sbjct: 266 WWARHVTIRVYCEDLVVSFMGNSGTANFANGKSKD 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449534456|ref|XP_004174178.1| PREDICTED: uncharacterized protein LOC101227635 [Cucumis sativus]

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 12/201 (5%)

Query: 25  SSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYEL 84
           S+ F+R ++ AL+LL  + ++ S I W+++ P  PVF V+SF+VSNF +      G++  
Sbjct: 46  SAGFLRGIVTALILLVAVMTLSSIITWIVLRPQIPVFKVDSFSVSNFNISKLNYSGNWNG 105

Query: 85  VVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCL--EKMGQQRQSPRFRSDF 142
            ++++NPN K +++I+R        +     +A ++  P  +  EK  Q     R +   
Sbjct: 106 SLTVENPNHKLTVNIERIQSFV---NYKENTLAMSYADPFFIDVEKSSQM----RVKLTS 158

Query: 143 CGPLHAGEFNEMSNDYGSKR---MVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEF 199
             P   G + E     G ++    VSFN+       F      T++ +MKV C +L   F
Sbjct: 159 SSPDDPGNWLETEEKVGQEKASGTVSFNLRFFAWTAFRSGSWWTRRIVMKVFCEDLKLAF 218

Query: 200 SAAKEIHGKLKDTGGKNNCSV 220
           +     HG          CSV
Sbjct: 219 TGPAATHGVYLADAHSKTCSV 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816524|ref|XP_002876145.1| hypothetical protein ARALYDRAFT_906612 [Arabidopsis lyrata subsp. lyrata] gi|297321983|gb|EFH52404.1| hypothetical protein ARALYDRAFT_906612 [Arabidopsis lyrata subsp. lyrata]

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 25/196 (12%)

Query: 20  HSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVK 79
           +    SS FVR +   L+++ VL  + ++I WLI+ P  P+F+VN+F+VSNF L      
Sbjct: 92  YQRPASSGFVRGIFTGLIVIVVLLCISTTITWLILRPRIPLFSVNNFSVSNFNLTGPVFS 151

Query: 80  GDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAA----VIATAWMGPLCLEK-----MG 130
             +   ++I+N N K     DR     L+Y ++A      +ATA+  P+ +E      +G
Sbjct: 152 AQWTANLTIENQNTKLKGYFDRIQG--LIYHQNAVGEDDFLATAFFPPVFVETKKSVVIG 209

Query: 131 Q-----QRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQ 185
           +      ++ P+       P   GE  +   D G+   VSFN+ M + V F       ++
Sbjct: 210 ETLTAGDKEQPKV------PSWVGEEMKKERDTGT---VSFNLRMAVWVTFKTDGWAARE 260

Query: 186 SLMKVSCTNLVAEFSA 201
             +KV C  L   F  
Sbjct: 261 RGLKVFCGKLKVGFEG 276

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445007|ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 20  HSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVK 79
           H N+  S F+R LI  ++++F++ +VI  I WL++ P  P F V+SF V+NF+     + 
Sbjct: 53  HHNARLS-FLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLS 111

Query: 80  GDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFR 139
             + +  S+ NPNKK ++S D  D   L Y+     +    + P   EK  Q   +  F 
Sbjct: 112 ASWFIGFSVFNPNKKMTVSYDFIDS-TLFYNNE--FLTDTRVPPFAQEKKTQSVVNASF- 167

Query: 140 SDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRF 176
           S     + A   N++ ND   +  + FNV +  RV F
Sbjct: 168 SALSAYVEASSLNKI-NDDRRRGTIKFNVGISARVGF 203

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530299|ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 8/163 (4%)

Query: 17  SQPHSNSHSSY---FVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTL 73
           + P+ ++H +    F+R LI  ++++F++ +VI  I WL++ P  P F V+SF V+NF+ 
Sbjct: 46  ANPYDSTHHNARLSFLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFST 105

Query: 74  LNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQR 133
               +   + +  S+ NPNKK ++S D  D   L Y+     +    + P   EK  Q  
Sbjct: 106 AAKTLSASWFIGFSVFNPNKKMTVSYDFIDS-TLFYNNE--FLTDTRVPPFAQEKKTQSV 162

Query: 134 QSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRF 176
            +  F S     + A   N++ ND   +  + FNV +  RV F
Sbjct: 163 VNASF-SALSAYVEASSLNKI-NDDRRRGTIKFNVGISARVGF 203

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464826|ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)

Query: 19  PHSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRV 78
           P  +S  + F+RR + A++  F++   I  I WL++ P  P F+V S ++S+F +  S++
Sbjct: 47  PPYSSPRATFLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVSASQL 106

Query: 79  KGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRF 138
            G++ +   ++NPNKK S+S DR +   + Y KSA +  T  + P       +   +  F
Sbjct: 107 SGEWNISFDVRNPNKKISISYDRIES-SIAY-KSATLSQTT-IAPFYQGTKNETTVTATF 163

Query: 139 RSDFCGPLHAGEFNEM--SNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLV 196
            +        G + ++   N   ++  VSF V +  RV F   +   +   +   C N +
Sbjct: 164 AA-------IGAYVDVLAINAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSAQC-NDI 215

Query: 197 AEFSAAKEIHGKLKDTGGKNNCSV 220
           A    +    G L   GG   C V
Sbjct: 216 ALGLPSNASRGSL--VGGSRECRV 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231224|ref|NP_190814.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] gi|4886281|emb|CAB43432.1| putative protein [Arabidopsis thaliana] gi|332645427|gb|AEE78948.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 25/196 (12%)

Query: 20  HSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLNSRVK 79
           +    SS FVR +   L++L VL  + ++I WL++ P  P+F+VN+F+VSNF +      
Sbjct: 97  YQRPASSGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFS 156

Query: 80  GDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAA----VIATAWMGPLCLEK-----MG 130
             +   ++I+N N K     DR     L+Y ++A      +ATA+  P+ +E      +G
Sbjct: 157 AQWTANLTIENQNTKLKGYFDRIQG--LVYHQNAVGEDEFLATAFFQPVFVETKKSVVIG 214

Query: 131 Q-----QRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIMRIRVRFGYRILPTKQ 185
           +      ++ P+  S           +EM  +  +   V+F++ M + V F       ++
Sbjct: 215 ETLTAGDKEQPKVPSWVV--------DEMKKERETG-TVTFSLRMAVWVTFKTDGWAARE 265

Query: 186 SLMKVSCTNLVAEFSA 201
           S +KV C  L   F  
Sbjct: 266 SGLKVFCGKLKVGFEG 281

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
TAIR|locus:2039632	243	AT2G27260 "AT2G27260" [Arabido	0.726	0.666	0.25	1.6e-05
TAIR|locus:2079974	300	AT3G52460 "AT3G52460" [Arabido	0.654	0.486	0.270	0.00037

TAIR|locus:2039632 AT2G27260 "AT2G27260" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 43/172 (25%), Positives = 73/172 (42%)

Query:    51 WLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYD 110
             +LIV P  P   +NS +VSNF + N++V G ++L +  +NPN K SL  + +  +C MY 
Sbjct:    81 FLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSKMSLHYETA--LCAMYY 138

Query:   111 KSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEF-NEMSNDYGSKRMVSFNVI 169
                ++  T  + P    K  Q   +        G    G   + +  +   K  V F++ 
Sbjct:   139 NRVSLSETR-LQPFDQGKKDQTVVNATL--SVSGTYVDGRLVDSIGKERSVKGNVEFDLR 195

Query:   170 MRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVH 221
             M   V F Y     ++  + V C ++      +    G+ K  G    C  +
Sbjct:   196 MISYVTFRYGAF-RRRRYVTVYCDDVAVGVPVSS---GEGKMVGSSKRCKTY 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2079974 AT3G52460 "AT3G52460" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00037, P = 0.00037
 Identities = 42/155 (27%), Positives = 72/155 (46%)

Query:    51 WLIVHPLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYD 110
             WL++ P  P+F+VN+F+VSNF +        +   ++I+N N K     DR     L+Y 
Sbjct:   128 WLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTANLTIENQNTKLKGYFDRIQG--LVYH 185

Query:   111 KSAA----VIATAWMGPLCLE-KMGQQRQSPRFRSDFCGP-LHAGEFNEMSNDYGSKRMV 164
             ++A      +ATA+  P+ +E K            D   P + +   +EM  +  +   V
Sbjct:   186 QNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGT-V 244

Query:   165 SFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEF 199
             +F++ M + V F       ++S +KV C  L   F
Sbjct:   245 TFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGF 279


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       187   0.00085  110 3  11 22  0.41    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  162 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.30u 0.14s 15.44t   Elapsed:  00:00:01
  Total cpu time:  15.30u 0.14s 15.44t   Elapsed:  00:00:01
  Start:  Fri May 10 23:15:58 2013   End:  Fri May 10 23:15:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_IX1355 hypothetical protein (233 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.37
smart00769	100	WHy Water Stress and Hypersensitive response.	98.28
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.48
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	96.84
COG5608	161	LEA14-like dessication related protein [Defense me	96.82
PLN03160	219	uncharacterized protein; Provisional	94.68

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=3.7e-36  Score=252.08  Aligned_cols=203  Identities=18%  Similarity=0.284  Sum_probs=167.2

Q ss_pred             CCCccccccccccccCCCCC---CCcchhhhHHHHHHHHHHHHHHHHheeeeEEEecCCcEEEEEeEEEeeeecCC----
Q 039379            3 LPIPKSAVHIQSSASQPHSN---SHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPLPPVFTVNSFTVSNFTLLN----   75 (223)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~i~~~i~~lvlrP~~P~~~V~~~~v~~~~~~~----   75 (223)
                      -|++|++.+..+-|++-.+.   .+|+++++||++++.+++++++++++++|++|||++|+|+|+++++++|++++    
T Consensus         8 ~p~a~~~~~~~~d~~~~~~~~~~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~   87 (219)
T PLN03160          8 RPLAPAAFRLRSDEEEATNHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTL   87 (219)
T ss_pred             CCCCCCcccccCchhhcCcchhccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCC
Confidence            49999999998777753322   35666666666666666666777777889999999999999999999999864    


Q ss_pred             -CeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEeeceEEeCCCeEEEeEEEEecccccCChhhHHhh
Q 039379           76 -SRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEM  154 (223)
Q Consensus        76 -~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp~f~q~~~~~t~v~~~l~~~~~~~l~~~~~~~l  154 (223)
                       +.+|++++++++++|||+ ++++|+++ ++.++|+|+.  +|.+.+|+|+|++++++.+++++... ...+..  ..+|
T Consensus        88 ~~~~n~tl~~~v~v~NPN~-~~~~Y~~~-~~~v~Y~g~~--vG~a~~p~g~~~ar~T~~l~~tv~~~-~~~~~~--~~~L  160 (219)
T PLN03160         88 RPGTNITLIADVSVKNPNV-ASFKYSNT-TTTIYYGGTV--VGEARTPPGKAKARRTMRMNVTVDII-PDKILS--VPGL  160 (219)
T ss_pred             ceeEEEEEEEEEEEECCCc-eeEEEcCe-EEEEEECCEE--EEEEEcCCcccCCCCeEEEEEEEEEE-eceecc--chhH
Confidence             378889999999999999 89999999 9999999999  99999999999999999999987654 223322  2468


Q ss_pred             hhhccCCceEEEEEEEEEEEEEEEeeeeecceeeEEEcceEEEeecCCccccceeecCCCCCCceecCC
Q 039379          155 SNDYGSKRMVSFNVIMRIRVRFGYRILPTKQSLMKVSCTNLVAEFSAAKEIHGKLKDTGGKNNCSVHHD  223 (223)
Q Consensus       155 ~~d~~s~g~v~~~v~v~~~vr~k~g~~~s~~~~~~v~C~~l~v~~~~~~~~~g~~~~~~~~~~C~v~~~  223 (223)
                      .+|.. .|.++|+++.+.+++++++++.++++.++++|+ +.|++.+     ..+.    .++|+.+.+
T Consensus       161 ~~D~~-~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~-v~V~~~~-----~~i~----~~~C~~~~~  218 (219)
T PLN03160        161 LTDIS-SGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCT-MTVNITS-----QAIQ----GQKCKRHVD  218 (219)
T ss_pred             HHHhh-CCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeE-EEEECCC-----CEEe----ccEeccccc
Confidence            89999 599999998888888889999999999999998 9998853     3343    588998743

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.37  E-value=4.4e-12  Score=92.78  Aligned_cols=98  Identities=19%  Similarity=0.269  Sum_probs=70.7

Q ss_pred             EEEEeCCCCeeEEEECCCceEEEEECCcceeEE-EEEeeceEEeCCCeEEEeEEEEecccccCChhhHHhhhhhccCCce
Q 039379           85 VVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIA-TAWMGPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSNDYGSKRM  163 (223)
Q Consensus        85 ~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg-~~~lp~f~q~~~~~t~v~~~l~~~~~~~l~~~~~~~l~~d~~s~g~  163 (223)
                      +|+++|||. ++++|+++ ++.++|+|+.  +| ....++|.|++++++.+.+.+..+ ...+    ...+.++. . |.
T Consensus         1 ~l~v~NPN~-~~i~~~~~-~~~v~~~g~~--v~~~~~~~~~~i~~~~~~~v~~~v~~~-~~~l----~~~l~~~~-~-~~   69 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSI-EYDVYYNGQR--VGTGGSLPPFTIPARSSTTVPVPVSVD-YSDL----PRLLKDLL-A-GR   69 (101)
T ss_dssp             EEEEEESSS-S-EEEEEE-EEEEEESSSE--EEEEEECE-EEESSSCEEEEEEEEEEE-HHHH----HHHHHHHH-H-TT
T ss_pred             CEEEECCCc-eeEEEeCE-EEEEEECCEE--EECccccCCeEECCCCcEEEEEEEEEc-HHHH----HHHHHhhh-c-cc
Confidence            589999999 99999999 9999999999  99 899999999999999999887765 2222    34455554 2 55


Q ss_pred             EEEEEEEEEEEEEEE-eeeeecceeeEEEcc
Q 039379          164 VSFNVIMRIRVRFGY-RILPTKQSLMKVSCT  193 (223)
Q Consensus       164 v~~~v~v~~~vr~k~-g~~~s~~~~~~v~C~  193 (223)
                      ..+++.+++++++++ +.+...++.+.++|+
T Consensus        70 ~~~~v~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   70 VPFDVTYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             SCEEEEEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             cceEEEEEEEEEEEEcccceeeeEEEeEEeE
Confidence            666776667777773 443334555555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.28  E-value=1.2e-05  Score=59.29  Aligned_cols=60  Identities=13%  Similarity=0.141  Sum_probs=55.8

Q ss_pred             eeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEee-ceEEeCCCeEEEeEEEEe
Q 039379           77 RVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMG-PLCLEKMGQQRQSPRFRS  140 (223)
Q Consensus        77 ~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp-~f~q~~~~~t~v~~~l~~  140 (223)
                      ..+.++.+.+++.|||. +.+.|+++ +..++|+|..  +|++..+ ++..++++++.+.+.+..
T Consensus        12 ~~~~~~~l~l~v~NPN~-~~l~~~~~-~y~l~~~g~~--v~~g~~~~~~~ipa~~~~~v~v~~~~   72 (100)
T smart00769       12 GLEIEIVLKVKVQNPNP-FPIPVNGL-SYDLYLNGVE--LGSGEIPDSGTLPGNGRTVLDVPVTV   72 (100)
T ss_pred             ceEEEEEEEEEEECCCC-CccccccE-EEEEEECCEE--EEEEEcCCCcEECCCCcEEEEEEEEe
Confidence            57889999999999999 99999999 9999999999  9999997 799999999999888775

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.48  E-value=0.0067  Score=51.37  Aligned_cols=82  Identities=12%  Similarity=0.186  Sum_probs=59.6

Q ss_pred             EecCCcEEEEEeEEEee--eecCCCeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEeece-EEeCCC
Q 039379           54 VHPLPPVFTVNSFTVSN--FTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPL-CLEKMG  130 (223)
Q Consensus        54 lrP~~P~~~V~~~~v~~--~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp~f-~q~~~~  130 (223)
                      +=|+.-.++-.++....  |+-+++.+..++.-.+.++|||. ..+.-.++ ++.+.|....  +|.+..... ..++++
T Consensus        96 LfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~-s~qv~~~~~V--VG~~~~~~~~~I~Prs  171 (238)
T PF07092_consen   96 LFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNL-SIQVLYMKTV--VGKGKNSNITVIGPRS  171 (238)
T ss_pred             EeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeE-EEEEEEEEeE--EeeeEecceEEecccC
Confidence            33774433333333322  33334578999999999999998 99999999 9999999988  999877744 667787


Q ss_pred             eEEEeEEEE
Q 039379          131 QQRQSPRFR  139 (223)
Q Consensus       131 ~t~v~~~l~  139 (223)
                      .+.+..++.
T Consensus       172 ~~q~~~tV~  180 (238)
T PF07092_consen  172 SKQVNYTVK  180 (238)
T ss_pred             CceEEEEee
Confidence            777776554

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=96.84  E-value=0.0046  Score=55.64  Aligned_cols=34  Identities=24%  Similarity=0.281  Sum_probs=29.6

Q ss_pred             eEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcc
Q 039379           78 VKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSA  113 (223)
Q Consensus        78 l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~  113 (223)
                      =..-|+++|.+.|||. +.|..+++ ++.||-+-..
T Consensus       346 qELmfdl~V~A~NPn~-~~V~I~d~-dldIFAKS~y  379 (387)
T PF12751_consen  346 QELMFDLTVEAFNPNW-FTVTIDDM-DLDIFAKSRY  379 (387)
T ss_pred             ceEEEeeEEEEECCCe-EEEEeccc-eeeeEecCCc
Confidence            4557899999999999 99999999 9999876655

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=96.82  E-value=0.046  Score=43.18  Aligned_cols=77  Identities=12%  Similarity=0.063  Sum_probs=61.1

Q ss_pred             CCcEEEEEeEEEeeeecCCCeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEee-ceEEeCCCeEEEe
Q 039379           57 LPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMG-PLCLEKMGQQRQS  135 (223)
Q Consensus        57 ~~P~~~V~~~~v~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp-~f~q~~~~~t~v~  135 (223)
                      ++|.+.--.+.......    ....+-.++.++|||. +.+--... +..++-.|.+  +|.+..- ++..++++..++.
T Consensus        31 ~~p~ve~~ka~wGkvt~----s~~EiV~t~KiyNPN~-fPipVtgl-~y~vymN~Ik--i~eG~~~k~~~v~p~S~~tvd  102 (161)
T COG5608          31 KKPGVESMKAKWGKVTN----SETEIVGTLKIYNPNP-FPIPVTGL-QYAVYMNDIK--IGEGEILKGTTVPPNSRETVD  102 (161)
T ss_pred             CCCCceEEEEEEEEEec----cceEEEEEEEecCCCC-cceeeece-EEEEEEcceE--eeccccccceEECCCCeEEEE
Confidence            45655555555544322    3457888999999999 99999999 9999999999  9997766 5999999999999


Q ss_pred             EEEEec
Q 039379          136 PRFRSD  141 (223)
Q Consensus       136 ~~l~~~  141 (223)
                      +.+..+
T Consensus       103 v~l~~d  108 (161)
T COG5608         103 VPLRLD  108 (161)
T ss_pred             EEEEEe
Confidence            988765

>PLN03160 uncharacterized protein; Provisional

Probab=94.68  E-value=0.34  Score=40.76  Aligned_cols=104  Identities=11%  Similarity=0.031  Sum_probs=66.4

Q ss_pred             CCCCCcchhhhHHHHHHHHHHHHHHHHheeeeEEEecC--CcEEEEEeEEEee-------eecCC----CeeEEEEEEEE
Q 039379           20 HSNSHSSYFVRRLIIALVLLFVLASVISSIAWLIVHPL--PPVFTVNSFTVSN-------FTLLN----SRVKGDYELVV   86 (223)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~l~~~l~i~~~i~~lvlrP~--~P~~~V~~~~v~~-------~~~~~----~~l~~~~~~~l   86 (223)
                      --.+++.+||.|+|++++++++++++++++++=.=.|+  --.++++++.+..       +|++-    ..-|.+. +.+
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~  109 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASF  109 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeE
Confidence            44778999999999999998988888888888777776  4566777766532       33321    0113333 334


Q ss_pred             EEeCCCCeeEEEECCCceEEEEECCcceeEEEEEeeceEEeCCCeEE
Q 039379           87 SIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMGPLCLEKMGQQR  133 (223)
Q Consensus        87 ~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp~f~q~~~~~t~  133 (223)
                      .-.  |..+.++|+.. .+.-    ..  +..+.++++.+...+.+.
T Consensus       110 ~Y~--~~~~~v~Y~g~-~vG~----a~--~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        110 KYS--NTTTTIYYGGT-VVGE----AR--TPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             EEc--CeEEEEEECCE-EEEE----EE--cCCcccCCCCeEEEEEEE
Confidence            433  34488999877 4433    23  555556666665555553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.39
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.09
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.64

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.39  E-value=6.1e-06  Score=65.85  Aligned_cols=100  Identities=20%  Similarity=0.186  Sum_probs=79.3

Q ss_pred             CCcEEEEEeEEEeeeecCCCeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEee-ceEEeCCCeEEEe
Q 039379           57 LPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMG-PLCLEKMGQQRQS  135 (223)
Q Consensus        57 ~~P~~~V~~~~v~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp-~f~q~~~~~t~v~  135 (223)
                      +.|+++++++.+.+++..    ..+|.+.|+++|||. ..+.+..+ +..++-.|..  ++++.++ ++..++++++.+.
T Consensus        43 ~~PeV~v~~v~~~~~~l~----~~~~~l~LrV~NPN~-~pLpi~gi-~Y~L~vnG~~--lasG~s~~~~tIpa~g~~~v~  114 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD----GVDYHAKVSVKNPYS-QSIPICQI-SYILKSATRT--IASGTIPDPGSLVGSGTTVLD  114 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS----SEEEEEEEEEEECSS-SCCBCCSE-EEEEEESSSC--EEEEEESCCCBCCSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc----eEEEEEEEEEECCCC-CCccccce-EEEEEECCEE--EEEEecCCCceECCCCcEEEE
Confidence            679999999999887775    478999999999999 99999999 9999999999  9999999 5899999999999


Q ss_pred             EEEEecccccCChhhHHhhhhhccCCceEEEEEEE
Q 039379          136 PRFRSDFCGPLHAGEFNEMSNDYGSKRMVSFNVIM  170 (223)
Q Consensus       136 ~~l~~~~~~~l~~~~~~~l~~d~~s~g~v~~~v~v  170 (223)
                      +.++.. .     ....++..++.....++.++++
T Consensus       115 Vpv~v~-~-----~~l~~~~~~l~~~~~i~Y~L~g  143 (174)
T 1yyc_A          115 VPVKVA-Y-----SIAVSLMKDMCTDWDIDYQLDI  143 (174)
T ss_dssp             EEEEES-H-----HHHHHTCCCCCSSEEECEEEEE
T ss_pred             EEEEEE-H-----HHHHHHHHhcCCCCccceEEEE
Confidence            887754 1     2223344555423444555443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.09  E-value=5.8e-06  Score=64.51  Aligned_cols=77  Identities=16%  Similarity=0.103  Sum_probs=67.3

Q ss_pred             CCcEEEEEeEEEeeeecCCCeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEee-ceEEeCCCeEEEe
Q 039379           57 LPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMG-PLCLEKMGQQRQS  135 (223)
Q Consensus        57 ~~P~~~V~~~~v~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp-~f~q~~~~~t~v~  135 (223)
                      +.|+++++++.+.+++..    ..+|.+.++++|||. ..+.+..+ +..++-.|..  ++++.++ ++..++++++.+.
T Consensus        20 ~~P~v~v~~v~~~~~~~~----~~~~~~~l~V~NPN~-~~lpi~gi-~y~l~vng~~--lasG~~~~~~~ipa~g~~~v~   91 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD----SVEYLAKVSVTNPYS-HSIPICEI-SFTFHSAGRE--IGKGKIPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT----EECEEEEEEEECSSS-SCCCCEEE-EEEEESSSSC--EEEEEEEECCCCSSSSEEEEE
T ss_pred             CCCEEEEEEeEEeccCcc----eeEEEEEEEEECCCC-CCcccccE-EEEEEECCEE--EEEEecCCCcEECCCCcEEEE
Confidence            579999999998876653    678999999999999 99999999 9999999999  9999998 6899999999988


Q ss_pred             EEEEec
Q 039379          136 PRFRSD  141 (223)
Q Consensus       136 ~~l~~~  141 (223)
                      +.++..
T Consensus        92 vpv~v~   97 (151)
T 1xo8_A           92 IPVVVP   97 (151)
T ss_dssp             ECCCEE
T ss_pred             EEEEEE
Confidence            876543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.64  E-value=0.00061  Score=52.07  Aligned_cols=73  Identities=8%  Similarity=0.152  Sum_probs=59.7

Q ss_pred             EEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEe-eceEEeCCCeEEEeEEEEecccccCChhhHHhhhh
Q 039379           79 KGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWM-GPLCLEKMGQQRQSPRFRSDFCGPLHAGEFNEMSN  156 (223)
Q Consensus        79 ~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~l-p~f~q~~~~~t~v~~~l~~~~~~~l~~~~~~~l~~  156 (223)
                      ...|.+.|++.|||. ..+.++.+ +..+...|..  +|++.. ..+..++.+++.+.+.+..+ ...+.+.....+.+
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl-~y~v~lng~~--la~G~s~~~~~I~~~g~~~v~v~~~i~-~~~l~~~~~~hi~n   90 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGY-HYTIEMNGVK--VADGYENSPVTVKPASATTLKFSLRLN-NSFLREWWVTHIAN   90 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEE-EEEEEETTEE--EEEEEECCCEEECTTCEEEEEEEEEEE-HHHHTTHHHHHHHT
T ss_pred             EEEEEEEEEEeCCCC-cceeeece-EEEEEECCEE--EEeeeecCceEECCCCcEEEEEEEEEc-hHHhHHHHHHHhhc
Confidence            567999999999998 99999999 9999999999  999874 57999999989999888776 34555554444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.17

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.17  E-value=1.5e-06  Score=65.98  Aligned_cols=77  Identities=16%  Similarity=0.095  Sum_probs=67.6

Q ss_pred             cCCcEEEEEeEEEeeeecCCCeeEEEEEEEEEEeCCCCeeEEEECCCceEEEEECCcceeEEEEEee-ceEEeCCCeEEE
Q 039379           56 PLPPVFTVNSFTVSNFTLLNSRVKGDYELVVSIKNPNKKASLSIDRSDDVCLMYDKSAAVIATAWMG-PLCLEKMGQQRQ  134 (223)
Q Consensus        56 P~~P~~~V~~~~v~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~~v~Y~g~~~~lg~~~lp-~f~q~~~~~t~v  134 (223)
                      =+.|+++++++++.++...    ..++.+.++++|||. .++..+.+ +..++..|..  ++++..+ ++..++++++.+
T Consensus        19 ~~kPev~l~~v~i~~v~~~----~~~l~~~l~V~NPN~-~~l~i~~l-~y~l~~~g~~--ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          19 IPKPEGSVTDVDLKDVNRD----SVEYLAKVSVTNPYS-HSIPICEI-SFTFHSAGRE--IGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCSCCCBCSEEEECCCTTT----EECEEEEEEEECSSS-SCCCCEEE-EEEEESSSSC--EEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCeEEEEEEEeeecccc----eEEEEEEEEEECCCC-CceeeeeE-EEEEEECCEE--EEeEecCCCcEEcCCCcEEE
Confidence            3569999999999887764    678999999999999 99999999 9999999999  9998888 688999999998


Q ss_pred             eEEEEe
Q 039379          135 SPRFRS  140 (223)
Q Consensus       135 ~~~l~~  140 (223)
                      .+.++.
T Consensus        91 ~vpv~v   96 (151)
T d1xo8a_          91 DIPVVV   96 (151)
T ss_dssp             EECCCE
T ss_pred             EEEEEE
Confidence            886654