Citrus Sinensis ID: 039482

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
EEKLTNSSIAKDSSDDDSVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEcccccccccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEcccccccEEEEEEEEcccccEEccccccccEEEEEccccccEEEEEEEEccccccccEEEEEEEEEccccEEEEcHHHHHHHHHHHcccEEEEEEEEEcccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccEEcccccccccccccccEEcccccccccccccccEEEEcccccccEEEEcccccccccccEEEEEEEccccccEEEcccccccEEEEEccccEEEEEEEEEcccccccccccEEEEEEcccccccccHHHHHHHHHHHHcccEEEEEEEEccccccccccccHHEEEEEccccEEEEccccEEEEEEEcccccc
Coil and Loop (DISEMBL)
eekltnssiakdssdddsvlgtpieldmrgtvmnhgnpknklRFRSRLckeegpgieqfqivgeatpgkkllgcgyplggahlCMFQWVRHLQDGTKHyikgaiepeyvvtaddvgklisvecipmddqghmLSVENVRLMsiqpkfvtcnpemqseidmhmskgeASFSVLLLVpssenqgpvtlpaTLILRRSSFQIKINSTEYVVIEEKFTIRLS
Flexible Loop (DISEMBL)
eekltnssiakdssdddsvlgtpieldmrgtvmnhgnpknKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSsfqikinsteyvvieekftirls
Low Complexity Region (SEG)
EEKLTNSSIAKdssdddsVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS
Disordered region (IsUnstruct)
***********************************************LCK**GPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCN****************SFSVLLLVP*****GPVTLPATLILRRSSFQIKINSTEYVVIEEKFTI***
Disordered Region (DISOPRED)
*************SDDDSVLGTPIE******************************IEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIE*KFT****
Disordered Region (DISEMBL)
*****************SVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS
Disordered Region (DISPRO)
*****************SVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFT****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
EEKLTNSSIAKDSSDDDSVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
356503123	607	PREDICTED: uncharacterized protein LOC10	0.743	0.266	0.619	6e-53
145338065	521	uncharacterized protein [Arabidopsis tha	0.738	0.309	0.598	8e-53
449432366	536	PREDICTED: uncharacterized protein LOC10	0.738	0.300	0.592	2e-51
449487556	484	PREDICTED: uncharacterized protein LOC10	0.839	0.378	0.529	4e-51
224124032	243	predicted protein [Populus trichocarpa]	0.729	0.654	0.612	7e-51
297833026	519	hypothetical protein ARALYDRAFT_477601 [	0.729	0.306	0.598	2e-50
255566034	510	hypothetical protein RCOM_1516730 [Ricin	0.743	0.317	0.583	5e-49
297744805	268	unnamed protein product [Vitis vinifera]	0.743	0.604	0.589	1e-47
255563252	1603	Disease resistance protein RPS5, putativ	0.733	0.099	0.566	9e-46
242093892	525	hypothetical protein SORBIDRAFT_10g02704	0.876	0.363	0.435	3e-37

>gi|356503123|ref|XP_003520361.1| PREDICTED: uncharacterized protein LOC100813936 [Glycine max]

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 104/168 (61%), Positives = 126/168 (75%), Gaps = 6/168 (3%)

Query: 51  EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
           E+GPGIE FQ+ G+A PG+KLLGCGYP+ G  LCMFQWVRHL+DGT+ YI+GA  PEYVV
Sbjct: 392 EDGPGIENFQVSGDAIPGEKLLGCGYPVRGTSLCMFQWVRHLEDGTRQYIEGATNPEYVV 451

Query: 111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
           TADDV KLI+VECIPMDD+G     E V+L +     +TC+ EM+ EI  ++SKGEA+FS
Sbjct: 452 TADDVDKLIAVECIPMDDKGRQ--GELVKLFANDQNKITCDSEMKHEIGTNLSKGEATFS 509

Query: 171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
           VLLL  SSEN       ATL LRRS +QIKIN TE  V++EKF+  LS
Sbjct: 510 VLLLRDSSENWE----QATLFLRRSGYQIKINGTEATVVDEKFSKELS 553

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145338065|ref|NP_187006.2| uncharacterized protein [Arabidopsis thaliana] gi|332640436|gb|AEE73957.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  212 bits (540), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 100/167 (59%), Positives = 130/167 (77%), Gaps = 6/167 (3%)

Query: 51  EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
           EEGPGI+ FQI+G+A PG+K+LGCG+P+ G  LCMFQWVRHL+DGT+ YI+GA  PEY+V
Sbjct: 306 EEGPGIDGFQIIGDAIPGEKVLGCGFPVRGTTLCMFQWVRHLEDGTRQYIEGATHPEYIV 365

Query: 111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
           TADDV KLI+VECIPMDDQG     E VRL +     + C+ EMQ+EID ++S+G+ASF+
Sbjct: 366 TADDVDKLIAVECIPMDDQGRQ--GELVRLFANDQNKIRCDTEMQTEIDTYISRGQASFN 423

Query: 171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRL 217
           V LL+ SSE+      PAT++L+RSS+QIK N+TE VVI EK++  L
Sbjct: 424 VQLLMDSSESWE----PATVVLKRSSYQIKTNTTEAVVISEKYSKEL 466

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432366|ref|XP_004133970.1| PREDICTED: uncharacterized protein LOC101207305 [Cucumis sativus]

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 125/167 (74%), Gaps = 6/167 (3%)

Query: 52  EGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVT 111
           EGP IE FQIVGEATPG +LL CGYP  G  LC+FQWV HL+DGT+ YI+GA  PEYVV 
Sbjct: 322 EGPSIENFQIVGEATPGSRLLACGYPTRGTSLCIFQWVWHLEDGTRQYIEGATNPEYVVG 381

Query: 112 ADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSV 171
           ADDV KLI+VECIPMDD+GH   +  V+L +     + C+P+MQ EID ++SKG+A+F+V
Sbjct: 382 ADDVDKLIAVECIPMDDKGHQGDL--VKLFANDQNKIRCDPDMQLEIDTYLSKGQATFNV 439

Query: 172 LLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
           LLL+ SSEN      PA++ LRRS +QIK+ +TE VVI EK++  LS
Sbjct: 440 LLLIDSSENWE----PASISLRRSGYQIKMGNTEAVVIAEKYSRELS 482

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487556|ref|XP_004157685.1| PREDICTED: uncharacterized protein LOC101226515 [Cucumis sativus]

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/204 (52%), Positives = 136/204 (66%), Gaps = 21/204 (10%)

Query: 15  DDDSVLGTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEGPGIEQFQIVGEATPGKKLLGC 74
           DDD+V     EL    T   + NP             EGP IE FQIVGEATPG +LL C
Sbjct: 248 DDDAV-----ELQRYTTDERYNNP----------VMIEGPSIENFQIVGEATPGSRLLAC 292

Query: 75  GYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLS 134
           GYP  G  LC+FQWV HL+DGT+ YI+GA  PEYVV ADDV KLI+VECIPMDD+GH   
Sbjct: 293 GYPTRGTSLCIFQWVWHLEDGTRQYIEGATNPEYVVGADDVDKLIAVECIPMDDKGHQGD 352

Query: 135 VENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRR 194
           +  V+L +     + C+P+MQ EID ++SKG+A+F+VLLL+ SSEN      PA++ LRR
Sbjct: 353 L--VKLFANDQNKIRCDPDMQLEIDTYLSKGQATFNVLLLIDSSENWE----PASISLRR 406

Query: 195 SSFQIKINSTEYVVIEEKFTIRLS 218
           S +QIK+ +TE VVI EK++  LS
Sbjct: 407 SGYQIKMGNTEAVVIAEKYSRELS 430

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124032|ref|XP_002319228.1| predicted protein [Populus trichocarpa] gi|222857604|gb|EEE95151.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 122/165 (73%), Gaps = 6/165 (3%)

Query: 54  PGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTAD 113
           PGIE FQI+G+ATPG+KLLGCG+P+ G  LCMFQWV HL+DGT+ YI+GA  PEY+VTAD
Sbjct: 31  PGIEGFQIIGDATPGEKLLGCGFPVRGTSLCMFQWVHHLEDGTRQYIEGATNPEYIVTAD 90

Query: 114 DVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLL 173
           DV KLI+VECIPMDDQG     E VRL +     + C+P+MQ EID ++SKGEA+FSVLL
Sbjct: 91  DVDKLIAVECIPMDDQGR--QGELVRLFANDQNKIKCDPDMQREIDTYISKGEATFSVLL 148

Query: 174 LVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
           L  SSEN        TL+LRRS +QIK +    VVI EKF+  LS
Sbjct: 149 LTDSSENWDST----TLVLRRSGYQIKSDGRGNVVIAEKFSKDLS 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833026|ref|XP_002884395.1| hypothetical protein ARALYDRAFT_477601 [Arabidopsis lyrata subsp. lyrata] gi|297330235|gb|EFH60654.1| hypothetical protein ARALYDRAFT_477601 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/167 (59%), Positives = 128/167 (76%), Gaps = 8/167 (4%)

Query: 51  EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
           EEGPGI+ FQI+G+A PG+K+LGCG+P+ G  LCMFQWVRHL+DGT+ YI+GA  PEYVV
Sbjct: 306 EEGPGIDGFQIIGDAIPGEKVLGCGFPVRGTTLCMFQWVRHLEDGTRQYIEGATHPEYVV 365

Query: 111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
           TADDV KLI+VECIPMDDQG     E VRL +     + C+ EMQ+EID ++S+G+ASF+
Sbjct: 366 TADDVDKLIAVECIPMDDQGRQ--GELVRLFANDQNKIRCDTEMQAEIDTYISRGQASFN 423

Query: 171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRL 217
           V LL+ SSE+       AT+IL+RSS+QIK N+TE  VI EK++  L
Sbjct: 424 VQLLMDSSESWE----TATVILKRSSYQIKTNTTE--VISEKYSKEL 464

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566034|ref|XP_002524005.1| hypothetical protein RCOM_1516730 [Ricinus communis] gi|223536732|gb|EEF38373.1| hypothetical protein RCOM_1516730 [Ricinus communis]

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 98/168 (58%), Positives = 122/168 (72%), Gaps = 6/168 (3%)

Query: 51  EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
           EEGPGIE FQI+G+A PG KLLGCGYP+ G  LCMFQWVRHL+DGT+ YI+GA  PEYVV
Sbjct: 276 EEGPGIEGFQIIGDAVPGGKLLGCGYPVRGTSLCMFQWVRHLEDGTRQYIEGATNPEYVV 335

Query: 111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
           TADDV KLI+VECIPMDDQG     E V+  +     + C+P+MQ  IDM++SKGEA+FS
Sbjct: 336 TADDVDKLIAVECIPMDDQGR--QGELVKRFANDQNKIKCDPDMQHAIDMYISKGEATFS 393

Query: 171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
           + LL  +S+        +TLILRRS +QIK  S +  +I EK++  LS
Sbjct: 394 IQLLTDASDKWK----SSTLILRRSGYQIKTISDDIELIAEKYSKNLS 437

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744805|emb|CBI38073.3| unnamed protein product [Vitis vinifera]

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/168 (58%), Positives = 119/168 (70%), Gaps = 6/168 (3%)

Query: 51  EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
           EE PGI+ FQI+G+A PG  LL CG+P+ G  LC+FQW+RHLQDGT  YI+GA  PEYVV
Sbjct: 52  EEHPGIDGFQIIGDAKPGCGLLACGFPVRGTSLCIFQWIRHLQDGTLQYIEGATNPEYVV 111

Query: 111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
           TADDV KLISVEC+PMDD G     E V+  +     +TC+PEMQ  ID H+SKG A FS
Sbjct: 112 TADDVDKLISVECVPMDDNGR--QGELVKRFANDQNKITCDPEMQLMIDSHISKGHAMFS 169

Query: 171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
           VLLL+ S +N       ATLILRRSS+Q+K+NSTE   I E F+  LS
Sbjct: 170 VLLLMDSLDNWE----AATLILRRSSYQVKVNSTETSQIAENFSKHLS 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563252|ref|XP_002522629.1| Disease resistance protein RPS5, putative [Ricinus communis] gi|223538105|gb|EEF39716.1| Disease resistance protein RPS5, putative [Ricinus communis]

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 94/166 (56%), Positives = 119/166 (71%), Gaps = 6/166 (3%)

Query: 52   EGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVT 111
            E PGIE  QI+G+A PG++L+GCGYP+GG  LCMFQWVRHL+DG+K YI GA EP YVVT
Sbjct: 1414 EEPGIEGIQIIGDAIPGERLIGCGYPVGGTSLCMFQWVRHLEDGSKQYIVGATEPHYVVT 1473

Query: 112  ADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSV 171
            ADDV KLISVECIP+DDQGH   +  +RL +   K + C+  MQ +ID + S  EA+F V
Sbjct: 1474 ADDVDKLISVECIPLDDQGHQGKL--MRLFANDQKKIQCDAGMQRKIDTYSSICEATFGV 1531

Query: 172  LLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRL 217
            LL++ S +N      PA L+LR++ +QIK  S E VVI EKF+  L
Sbjct: 1532 LLMMDSFDNWE----PANLVLRQAGYQIKGKSEENVVIAEKFSKEL 1573

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242093892|ref|XP_002437436.1| hypothetical protein SORBIDRAFT_10g027040 [Sorghum bicolor] gi|241915659|gb|EER88803.1| hypothetical protein SORBIDRAFT_10g027040 [Sorghum bicolor]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 121/200 (60%), Gaps = 9/200 (4%)

Query: 21  GTPIELDMRGTVMNHGNPKNKLRFRSRLCKEEG---PGIEQFQIVGEATPGKKLLGCGYP 77
           G+  + D  GT  ++   + ++   S+L + +G   PGIE FQI GE  PG +L  CG+P
Sbjct: 270 GSNFQQDTGGTTPSNYFEEGRVDGDSQLYQPDGDALPGIEGFQIAGEPRPGFQLTACGFP 329

Query: 78  LGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSVEN 137
             G  LC FQWVRHL++GT+  I+GA   +YVVTADDVG L++V+C PMDD G    +  
Sbjct: 330 TNGTTLCNFQWVRHLENGTRQSIEGATMYDYVVTADDVGTLLAVDCTPMDDNGRQGDL-- 387

Query: 138 VRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSF 197
           V   +     +TC+PEMQS ID ++S G A F VL+L  S E        ATL+L R ++
Sbjct: 388 VTEFANNGNKITCDPEMQSHIDAYVSTGRAEFEVLVLAYSPEEWE----LATLVLTRPNY 443

Query: 198 QIKINSTEYVVIEEKFTIRL 217
           QIK   T  V+I+EK++  L
Sbjct: 444 QIKFTKTGEVIIDEKYSQSL 463

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2096434	521	AT3G03560 [Arabidopsis thalian	0.738	0.309	0.598	2.5e-49
TAIR|locus:2154468	729	AT5G23490 "AT5G23490" [Arabido	0.701	0.209	0.397	8.4e-25

TAIR|locus:2096434 AT3G03560 [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 100/167 (59%), Positives = 130/167 (77%)

Query:    51 EEGPGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVV 110
             EEGPGI+ FQI+G+A PG+K+LGCG+P+ G  LCMFQWVRHL+DGT+ YI+GA  PEY+V
Sbjct:   306 EEGPGIDGFQIIGDAIPGEKVLGCGFPVRGTTLCMFQWVRHLEDGTRQYIEGATHPEYIV 365

Query:   111 TADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFS 170
             TADDV KLI+VECIPMDDQG     E VRL +     + C+ EMQ+EID ++S+G+ASF+
Sbjct:   366 TADDVDKLIAVECIPMDDQGRQ--GELVRLFANDQNKIRCDTEMQTEIDTYISRGQASFN 423

Query:   171 VLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRL 217
             V LL+ SSE+  P    AT++L+RSS+QIK N+TE VVI EK++  L
Sbjct:   424 VQLLMDSSESWEP----ATVVLKRSSYQIKTNTTEAVVISEKYSKEL 466

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2154468 AT5G23490 "AT5G23490" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-25, P = 8.4e-25
 Identities = 64/161 (39%), Positives = 94/161 (58%)

Query:    54 PGIEQFQIVGEATPGKKLLGCGYPLGGAHLCMFQWVRHLQDGTKHYIKGAIEPEYVVTAD 113
             PGIE  QI GE  PG +L  CGY + G   C F+WV HL+DG+ +YI GA +P Y+VTAD
Sbjct:   508 PGIEDLQISGEPYPGHELQACGYSINGTTSCNFEWVCHLEDGSVNYIDGAKQPNYLVTAD 567

Query:   114 DVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLL 173
             DV   +++E  P+DD+      E V++ +   + + C+P+MQS I+  +  G AS+ V L
Sbjct:   568 DVDLYLAIEVQPLDDRNR--KGELVKVFANDNRKIACHPDMQSNIEKTLHTGHASYKVSL 625

Query:   174 LVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFT 214
              V   +    +   ATL ++R  + IK  S   + I EKF+
Sbjct:   626 AVGFVD----IWEAATLSIKREGYSIKCISD--LTIAEKFS 660


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       211   0.00081  112 3  11 22  0.38    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  168 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.80u 0.20s 17.00t   Elapsed:  00:00:01
  Total cpu time:  16.80u 0.20s 17.00t   Elapsed:  00:00:01
  Start:  Sat May 11 03:13:10 2013   End:  Sat May 11 03:13:11 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
4dix_A	230	Plectin-related protein; PH domain, IG domain, mal	1e-32

>4dix_A Plectin-related protein; PH domain, IG domain, malonate ION, beta sheet, PH superfold cytosolic, protein binding; 1.70A {Arabidopsis thaliana} Length = 230

 Score =  116 bits (292), Expect = 1e-32
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 50  KEEGPGIEQFQIVGEATPGKKL--LGCGYPLGGAHLCMFQWVR-HLQDGTKHYIKGAIEP 106
           K E      ++I G    G  L    C         C  QW R       K  I GA + 
Sbjct: 6   KSEENISLVYEIDGTEALGSCLRVRPCSNDAPDLSKCTIQWYRSSSDGSKKELISGATKS 65

Query: 107 EYVVTADDVGKLISVECIPMDDQGHMLSVENVRLMSIQPKFVTCNPEMQSEIDMHMSKGE 166
            Y     DVG+++  + I             + L ++    +     + S ++  + K +
Sbjct: 66  VYAPEPFDVGRVLHADIIYDGHS--------LSLSTVGK--IDPAAGLGSYVEALVRKHD 115

Query: 167 ASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTIRLS 218
             F+V++   S E+    T  +  +      +IK+   + V+ +E ++  + 
Sbjct: 116 VDFNVVVTQMSGEDH---TSESIHLFHVGKMRIKLCKGKTVIAKEYYSSAMQ 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	218
4dix_A	230	Plectin-related protein; PH domain, IG domain, mal	99.94

>4dix_A Plectin-related protein; PH domain, IG domain, malonate ION, beta sheet, PH superfold cytosolic, protein binding; 1.70A {Arabidopsis thaliana}

Probab=99.94  E-value=2e-26  Score=199.20  Aligned_cols=146  Identities=19%  Similarity=0.303  Sum_probs=132.0

Q ss_pred             eEEeccccCCceeEEeeeec--CCeeeeeEEEEEEc-CCCCeeeeecCCCceeEEEccCCCceEEEEEEEcCCCCccccc
Q 039482           59 FQIVGEATPGKKLLGCGYPL--GGAHLCMFQWVRHL-QDGTKHYIKGAIEPEYVVTADDVGKLISVECIPMDDQGHMLSV  135 (218)
Q Consensus        59 lqI~Gea~pG~~L~acG~~i--nGttlC~FQWvRhl-eDGt~~~IeGAt~p~Y~vTADDV~~lIaVec~PmDd~~rk~sG  135 (218)
                      +.+-|.-..|.-|+..--+.  ---++|+|||+|++ ++|+++.|.||+.|.|..+++|||.+|+++|.|      .  |
T Consensus        15 y~L~G~e~LGs~L~i~~~~~~~~dlS~CsiQW~R~~~egs~re~IsGAtk~~YAPeP~DVGrlLqadi~~------~--G   86 (230)
T 4dix_A           15 YEIDGTEALGSCLRVRPCSNDAPDLSKCTIQWYRSSSDGSKKELISGATKSVYAPEPFDVGRVLHADIIY------D--G   86 (230)
T ss_dssp             EEEESCCBTTSCEEEEESSTTSCCGGGSEEEEEEECTTSSSEEECTTCCSSEECCCGGGBTSEEEEEEEE------T--T
T ss_pred             eeecchhhccceEEEEeccCCCCcccccceEEEEeecCCCceeEEeccccccccCCccccccEEEEEEec------C--C
Confidence            45567788888887765544  34689999999999 579999999999999999999999999999998      3  8


Q ss_pred             ceEEEeeeCCceeeeChhhHHHHhheeeeeEEEEEEEeecCCccCcCCCCCCeEEEEeecceEEEEcCccceEEeeeecc
Q 039482          136 ENVRLMSIQPKFVTCNPEMQSEIDMHMSKGEASFSVLLLVPSSENQGPVTLPATLILRRSSFQIKINSTEYVVIEEKFTI  215 (218)
Q Consensus       136 elVkvfANd~~kItcdpeMq~~Id~~~s~G~Asf~V~ll~~~~d~WE~~~~pATL~lkR~gY~Ik~~~~~~vvI~EKfs~  215 (218)
                      +.+.+|++  .+|.|+|+|++.|++++.+|.+.|.|.++....+.||.   +++++|.+-.|.||......+++.|+||+
T Consensus        87 ~k~t~~T~--gpId~a~GL~~yVEaL~rk~~tEFNVvv~q~nG~d~~s---~sihvl~vgk~RiKL~kg~~t~akE~YSs  161 (230)
T 4dix_A           87 HSLSLSTV--GKIDPAAGLGSYVEALVRKHDVDFNVVVTQMSGEDHTS---ESIHLFHVGKMRIKLCKGKTVIAKEYYSS  161 (230)
T ss_dssp             EEEEEEEE--EEBBCCTTHHHHHHHHHTTSEEEEEEEEEEETTEECCC---CCEEEEEEESSEEEEEETTEEEEEEECCT
T ss_pred             cEEEEEec--CCCCCCchhHHHHHHHhhcCCCcEEEEEEEEcCccCcc---ceEEEEEeccEEEEEecCceEEeeeeecc
Confidence            89999999  89999999999999999999999999999999999994   49999999999999998888999999998


Q ss_pred             cC
Q 039482          216 RL  217 (218)
Q Consensus       216 ~l  217 (218)
                      .+
T Consensus       162 sm  163 (230)
T 4dix_A          162 AM  163 (230)
T ss_dssp             TC
T ss_pred             cc
Confidence            64

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00