Citrus Sinensis ID: 039506

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
Protein Sequence
LSTSSSSILHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVSKTPFQRAHVFATKSND
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccHHHHHHHHHHHHHHccccccccccEEEEHHHHHHHcccEEHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccHEEEEEEHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
lstssssiLHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGlsytnptyaaaiqpsiPVFTFLLAVMMGTERVNLLttegqakvggTFICVSGAILMVLfrgpalfgcgnedfvgenevrvrgqpepvgWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQapilrkypsslsvtaYSYFFGAVLMVITAFFLtndstewsLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFlgspiylgsVLGGCLIIAGLYMVTWVSyrerqappvitthvtreveplinkdaavsktpfqrAHVFATKSND
Flexible Loop (DISEMBL)
lstssssiLHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAppvitthvtreveplinkdaavsktpfqrahvfatksnd
Low Complexity Region (SEG)
LSTSSSSILHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKrtrlpmtrrllmSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVSKTPFQRAHVFATKSND
Disordered region (IsUnstruct)
*******ILHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDA*******************
Disordered Region (DISOPRED)
******S**HIYIYFGFLVYFFIEA********************REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNED***********************IDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW***********************************************
Disordered Region (DISEMBL)
LSTSSSSILHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVSKTPFQRAHVFATKSND
Disordered Region (DISPRO)
****SSSILHIYIYFGFLVYFFIEAKQRTLHDETKNFK*KSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN******************************DQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR*******************************************
Transmembrane Helix (TMHMM)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LSTSSSSILHIYIYFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVSKTPFQRAHVFATKSND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	424	2.2.26 [Sep-21-2011]
Q8W4R9	398	WAT1-related protein At4g	yes	no	0.841	0.896	0.730	1e-149
F4KD68	381	WAT1-related protein At5g	no	no	0.853	0.950	0.693	1e-147
Q5PP32	385	WAT1-related protein At3g	no	no	0.886	0.976	0.677	1e-141
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.877	0.956	0.366	2e-66
Q9LV20	383	WAT1-related protein At3g	no	no	0.787	0.872	0.368	3e-63
Q6J163	410	Auxin-induced protein 5NG	N/A	no	0.778	0.804	0.374	6e-63
F4J9A3	369	WAT1-related protein At3g	no	no	0.766	0.880	0.367	4e-58
Q9M0B8	373	WAT1-related protein At4g	no	no	0.813	0.924	0.307	3e-43
F4HZQ7	389	WAT1-related protein At1g	no	no	0.778	0.848	0.332	1e-41
O80638	374	WAT1-related protein At2g	no	no	0.716	0.812	0.327	2e-41

>sp|Q8W4R9|WTR35_ARATH WAT1-related protein At4g19185 OS=Arabidopsis thaliana GN=At4g19185 PE=2 SV=1

 Score =  529 bits (1363), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/360 (73%), Positives = 301/360 (83%), Gaps = 3/360 (0%)

Query: 45  EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKR 104
           ER+   AH AMA VQLF GGYHVITKVALNVGVNQLVFCV RDLLALSILAP+AYFRE++
Sbjct: 15  ERDARMAHTAMAFVQLFNGGYHVITKVALNVGVNQLVFCVCRDLLALSILAPLAYFRERK 74

Query: 105 TRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGT 164
            R PM + LL+SFFFLGL G+FGNQLLFL+GL+YTNPTYAAAIQPSIPVFTFLLAVMMGT
Sbjct: 75  IRTPMNKSLLLSFFFLGLAGVFGNQLLFLIGLTYTNPTYAAAIQPSIPVFTFLLAVMMGT 134

Query: 165 ERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGW 224
           ERVNLL  EGQ KVGGT +CV GA+ MV+FRGPAL G  + DF   NE+  +GQPEP GW
Sbjct: 135 ERVNLLRIEGQTKVGGTLVCVMGAVFMVVFRGPALLGDKDADFAMNNEISAKGQPEPTGW 194

Query: 225 LLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV 284
           L+S F+D+G +QWH+GVLCLIGNCMCMA F+AIQAP+L+KYP++LSV A SYFFG VLM 
Sbjct: 195 LVSGFLDLGFEQWHIGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVAALSYFFGTVLMC 254

Query: 285 ITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAA 344
            TAFF+  +  +W LTQSE+ AVIYAG+IASA+NYGL+TWSNKI+GPALVALYNPLQPAA
Sbjct: 255 TTAFFMVKEPLDWKLTQSEVLAVIYAGVIASALNYGLLTWSNKIIGPALVALYNPLQPAA 314

Query: 345 SAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPV---ITTHVTREVEPLI 401
           SAFLS+IFLGSPIYLGSV+GG  II GLYMVTW S+RER+       I  H  +  EPLI
Sbjct: 315 SAFLSRIFLGSPIYLGSVVGGFFIILGLYMVTWASFRERKTAVSGIGIAPHGLKTSEPLI 374

Arabidopsis thaliana (taxid: 3702)

>sp|F4KD68|WTR43_ARATH WAT1-related protein At5g45370 OS=Arabidopsis thaliana GN=At5g45370 PE=2 SV=1

 Score =  523 bits (1347), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/366 (69%), Positives = 294/366 (80%), Gaps = 4/366 (1%)

Query: 43  SMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFRE 102
           + ERE   AH AM LVQ+  GGYHV+TKVALNVGVNQLVFCVFRDLLALSILAP+A+FRE
Sbjct: 12  ATERETRMAHSAMTLVQVINGGYHVVTKVALNVGVNQLVFCVFRDLLALSILAPLAFFRE 71

Query: 103 KRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM 162
           +  R PM R +  S FFLGL GIFGNQLLFL+GLSYTNPTYAAAIQPSIPVFTFLLAV+M
Sbjct: 72  RTIRPPMNRSIFFSLFFLGLAGIFGNQLLFLMGLSYTNPTYAAAIQPSIPVFTFLLAVLM 131

Query: 163 GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPV 222
           GTE+VNLL  EGQ KVGGT +CVSGAI M LFRGPALFG  +     ++ +  R QPE  
Sbjct: 132 GTEKVNLLKVEGQTKVGGTLVCVSGAIAMALFRGPALFGGKDAADSVKSVIIDRSQPELN 191

Query: 223 GWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL 282
           GWL+S+F+ +G DQWH+GVLCLIGNCMCMAAF+A+QAP+L+KYP+ LSV AYSYFFGA +
Sbjct: 192 GWLVSSFLGLGFDQWHIGVLCLIGNCMCMAAFLAVQAPVLKKYPAYLSVAAYSYFFGASI 251

Query: 283 MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQP 342
           M+ TA     +  +WSLTQSE+ AVI+AG+ ASA+NYGL+TWSNKILG ALV+LYNPLQP
Sbjct: 252 MITTAILFVREPKDWSLTQSEVLAVIFAGVFASALNYGLLTWSNKILGAALVSLYNPLQP 311

Query: 343 AASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAP----PVITTHVTREVE 398
           A SAFLS IFLGSPIYLGSVLGG LII GLYMVTW SYRE+Q       + ++   R  E
Sbjct: 312 ATSAFLSTIFLGSPIYLGSVLGGILIICGLYMVTWASYREQQTTSAGNEIASSSDVRISE 371

Query: 399 PLINKD 404
           P I +D
Sbjct: 372 PFIYRD 377

Arabidopsis thaliana (taxid: 3702)

>sp|Q5PP32|WTR25_ARATH WAT1-related protein At3g45870 OS=Arabidopsis thaliana GN=At3g45870 PE=2 SV=1

 Score =  501 bits (1289), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/388 (67%), Positives = 314/388 (80%), Gaps = 12/388 (3%)

Query: 43  SMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFRE 102
           ++ERE  +AH AM  VQLF GGYHVITKVALNVGVNQLVFCVFRDL+ALSILAP+AY R+
Sbjct: 4   TVEREAWKAHVAMIGVQLFNGGYHVITKVALNVGVNQLVFCVFRDLIALSILAPLAYIRD 63

Query: 103 KRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM 162
           KRTR P+ R+ L++FFFLGLTGIFGNQLLFL+GL+YTNPTYAAAIQPSIPVFTF+LA++M
Sbjct: 64  KRTRPPLNRQFLLAFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAIQPSIPVFTFILALIM 123

Query: 163 GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPV 222
           GTER+NL   EGQAKVGGT ICV+GA+LMVLFRG ALFG    + +G  E R     E  
Sbjct: 124 GTERLNLFKLEGQAKVGGTLICVAGAVLMVLFRGLALFGETEAESLGHGESR---HTETS 180

Query: 223 GWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL 282
           G  +S F + GL +W+LGVLCLIGNC CMAAF+AIQAP+L+KYP++LSVTAYSYFFG + 
Sbjct: 181 GHFMSGFFN-GLGRWNLGVLCLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSYFFGTMF 239

Query: 283 MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQP 342
           MV +AFF+TN+ST WSLT+SE FAV+YAG+IASA+NYGL+TWSNKILGP+LVALYNPLQP
Sbjct: 240 MVTSAFFMTNESTNWSLTRSEFFAVVYAGVIASALNYGLLTWSNKILGPSLVALYNPLQP 299

Query: 343 AASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW--VSYRERQAPPVITTHVTREVEPL 400
           AASAFLS+IFLGSPIYLGS+LGGC IIAGLY VTW     ++  A   +    ++E EPL
Sbjct: 300 AASAFLSRIFLGSPIYLGSILGGCAIIAGLYSVTWASYKEKKAAAAMAVIPITSKEAEPL 359

Query: 401 INKDAAVSKTP----FQRAHVFATKSND 424
           I KD      P    F ++ + + KS+D
Sbjct: 360 IYKDH--KNKPIGHLFTKSPISSPKSDD 385

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  253 bits (646), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/390 (36%), Positives = 224/390 (57%), Gaps = 18/390 (4%)

Query: 30  LHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLL 89
           + D T N +  SL    E L+ H AM  +Q  Y G+HV+++ ALN+G+++LVF V+R+++
Sbjct: 1   MADNTDNRR--SLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNII 58

Query: 90  ALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQP 149
           AL +L P AYF EK+ R  +T   L+ FFFL L GI  NQ  +LLGL  T+PT+A+++Q 
Sbjct: 59  ALLLLLPFAYFLEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQN 118

Query: 150 SIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNE---D 206
           S+P  TFL+A ++  E+V +   +G +K+ GT +CV+GA ++ L++GP ++   +     
Sbjct: 119 SVPAITFLMAALLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAH 178

Query: 207 FVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP 266
            +  N   +     P+G       +     W LG + LIG+C+  + ++  QAP+L+ YP
Sbjct: 179 LLTTNSAVL----APLG-------NAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYP 227

Query: 267 SSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQS-ELFAVIYAGIIASAVNYGLITWS 325
           + LSVT+Y+ FFG +  +I A F   DS  W      ELF ++YAGI+AS + + +  W 
Sbjct: 228 ARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWC 287

Query: 326 NKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQA 385
               GP  VA+Y P+Q    A ++ I LG   YLG ++G  LIIAGLY V +    ER+ 
Sbjct: 288 IDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKF 347

Query: 386 PPVITTHVTREVEPLINKDAAVSKTPFQRA 415
             +    +    E  I + A VS+   + +
Sbjct: 348 AALEKAAIQSSAEHGIER-APVSRNSIKSS 376

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  243 bits (619), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 211/366 (57%), Gaps = 32/366 (8%)

Query: 54  AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRL 113
           A+  +Q  + G+H++++VALN+GV+++V+ V+R+LLAL ++ P AYF EK+ R P+T  L
Sbjct: 38  ALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTISL 97

Query: 114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTE 173
           L  FFFL L GI  NQ  +LLGL Y  PT+A+A+Q S+P  TF++A  +  E ++L+   
Sbjct: 98  LAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRKH 157

Query: 174 GQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIG 233
           G AKV GT + + GA ++ L+RG  +F  G           +  Q E V         +G
Sbjct: 158 GVAKVLGTLVSIGGATVITLYRGFPIFDQG-----------LNMQKEEV---------VG 197

Query: 234 LDQWH---LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL 290
            D  H   LG L L+G+C+  A ++ +QAP+L++YP+ L++T+++ FFG +  ++ A F+
Sbjct: 198 SDNSHSLTLGWLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFV 257

Query: 291 TNDSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLS 349
             D   W + +  ELF ++YAGIIAS +   L TW     GP  VA++ PLQ    A ++
Sbjct: 258 ETDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMA 317

Query: 350 KIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRER--------QAPPVITTHVTREVEPLI 401
            + LG  +Y G ++G   I+ GLY+V W    ER        Q P  +T H+        
Sbjct: 318 FLILGDQLYSGGIVGAVFIMLGLYLVLWGKNEERKLALEESQQDPESLTKHLLEAQHKKS 377

Query: 402 NKDAAV 407
           N ++ V
Sbjct: 378 NSESEV 383

Arabidopsis thaliana (taxid: 3702)

>sp|Q6J163|5NG4_PINTA Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1

 Score =  241 bits (616), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 199/339 (58%), Gaps = 9/339 (2%)

Query: 47  EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR 106
           E ++ H AM  +Q  Y G+H++++ ALN+GV+++VF V+R++LAL ++ P AYF EK+ R
Sbjct: 15  ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query: 107 LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
             +T   L+ FF L L GI G   +  L +    PT+A+AIQ S+P  TF++A  +  E+
Sbjct: 75  PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEK 134

Query: 167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
           V++   +G AK+ GT  CVSGA ++ L++GP +      +     EV         G   
Sbjct: 135 VHISRRDGLAKIIGTVACVSGATIITLYKGPPITHIWRPNL----EVTASYFKAFQG--- 187

Query: 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
            N +    + W LG + L+GNC+  + +I +QAP+L++YP+ LSVT+++ FFG +  +I 
Sbjct: 188 -NDLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLII 246

Query: 287 AFFLTNDSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAAS 345
           A F   D   W + +  ELF ++YAG +AS + + +  W     GP  VA+Y P+Q  A 
Sbjct: 247 AAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAV 306

Query: 346 AFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
           A ++ I LG   YLG + G  LII GLY+V W    E++
Sbjct: 307 AIMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKR 345

Pinus taeda (taxid: 3352)

>sp|F4J9A3|WTR26_ARATH WAT1-related protein At3g53210 OS=Arabidopsis thaliana GN=At3g53210 PE=2 SV=1

 Score =  225 bits (574), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 198/340 (58%), Gaps = 15/340 (4%)

Query: 47  EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR 106
           E  + H AM + Q  Y G HVI + ALN+GV++LVF ++R ++A S+LAP AYF EK+ R
Sbjct: 6   ERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFLEKKER 65

Query: 107 LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
             M    L+ FF LGL GI  NQ  ++ GL  T+PT+A+A +  +P  +FL+A ++G E+
Sbjct: 66  PAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAALLGIEK 125

Query: 167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
           V     +G AKV GT + V+G++++ L++GP ++          N V    +PE      
Sbjct: 126 VEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQ------PSLNIVNQTIKPEEAEEEN 179

Query: 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
            N        W LG LCL+G+C+C +++I +Q+P+L+KYP+  S  +YS FF  +     
Sbjct: 180 KN--------WTLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGI 231

Query: 287 AFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAAS 345
           + +   D   W  ++  EL+A++Y G++ SA+ + +  +  +  GP  V+ Y PLQ   +
Sbjct: 232 SAYFERDLERWKIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIA 291

Query: 346 AFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQA 385
           A L+ + LG   YLG ++G  LI++GLY+V      E QA
Sbjct: 292 AVLATLALGEHFYLGGLIGAILIMSGLYLVVMGKSWENQA 331

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B8|WTR37_ARATH WAT1-related protein At4g30420 OS=Arabidopsis thaliana GN=At4g30420 PE=3 SV=1

 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 183/377 (48%), Gaps = 32/377 (8%)

Query: 54  AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRL 113
           AM ++QL Y G  +  +  L  G++  VF ++R   A   + P  Y   +++++ ++   
Sbjct: 2   AMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSLD 61

Query: 114 LMSF---FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLL 170
           L SF   F + L GI  NQ L+L GL  T+ +  +A+   IP  TFL++ + G E++NL 
Sbjct: 62  LKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNLR 121

Query: 171 TTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFI 230
              G AK+ GT +CV+GAI M L RGP +    +   + ++             +L +  
Sbjct: 122 DIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKS-------------VLGHLK 168

Query: 231 DIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL 290
           D   + W +G L L  + +C + ++ +Q PI   YP +LS++A+   FG +   +  FFL
Sbjct: 169 D--QNTWLIGCLFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFL 226

Query: 291 TNDSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLS 349
             D   W L + SE    +YAGI ASA+++ +  W+    GP   AL+NPL       L+
Sbjct: 227 EKDPNAWILHSYSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILA 286

Query: 350 KIFLGSPIYLGSVLGGCLIIAGLYMVTW---------VSYRERQAPPVITTHVTREVEPL 400
            +F    IY GS++GG  +I GLY V W            R+      +  H+       
Sbjct: 287 ALFFHEEIYTGSLIGGLGVILGLYTVLWGKAKDVMMNQDQRDNDQKSEVKIHIEDSSNTT 346

Query: 401 I-NKDAAVSKTPFQRAH 416
           I NKD    K P    H
Sbjct: 347 ICNKDL---KNPLLSKH 360

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  171 bits (433), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 49  LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLP 108
           L+ + AM  +Q  Y G ++IT V+L  G+N  V  V+R  +A +++AP A F E++ R  
Sbjct: 9   LKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPK 68

Query: 109 MTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVN 168
           MT R+ +    LG      +Q L+ +G++YT+ T+A+A    +P  TF+LA++   E VN
Sbjct: 69  MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVN 128

Query: 169 LLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSN 228
                  AKV GT I VSGA+LM L++GP +      DF+        G     G     
Sbjct: 129 FKKVRSIAKVVGTVITVSGALLMTLYKGPIV------DFIRFGGGGGGGSDGAGGSHGGA 182

Query: 229 FIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAF 288
                   W  G L L+G     A F  +Q+  L++YP+ LS+T      G +     + 
Sbjct: 183 GAAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSL 242

Query: 289 FLTNDSTEWSLT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAF 347
               D + W +   S LFA  Y+G+I S V Y +     +  GP  VA +NPL    +A 
Sbjct: 243 VTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAA 302

Query: 348 LSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
           L  + L   I+LGSV+G   II GLY V W   ++++
Sbjct: 303 LGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKR 339

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 169/339 (49%), Gaps = 35/339 (10%)

Query: 58  VQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSF 117
           +Q  Y G  +I K ALN G++  V   +R ++A   +AP AYF +++ R  MT  +    
Sbjct: 15  LQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLSIFFKI 74

Query: 118 FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAK 177
             LGL     +Q L+  G+ YT+ T+ AA+   +P F F++A +   E+VN+     QAK
Sbjct: 75  LLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHSQAK 134

Query: 178 VGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQW 237
           + GT + V GA+LM + +GP +                     P+ W  +N  DI  D  
Sbjct: 135 ILGTIVTVGGAMLMTVVKGPLI---------------------PLPW--ANPHDIHQDSS 171

Query: 238 HLGV---------LCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAF 288
           + GV         L  IG C+C A FI +QA  L+ YP  LS+TAY  F G++   I A 
Sbjct: 172 NTGVKQDLTKGASLIAIG-CICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVAL 230

Query: 289 FLTN-DSTEWSLT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASA 346
           F+   + + W++   S+L A +Y G+I S + Y +     K  GP  V  +NPL     A
Sbjct: 231 FIERGNPSAWAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVA 290

Query: 347 FLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQA 385
            L  I L   ++LG +LG  +I+ GLY V W   ++  +
Sbjct: 291 ILGSIILAEVMFLGRILGAIVIVLGLYSVLWGKSKDEPS 329

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	424
255557795	392	Auxin-induced protein 5NG4, putative [Ri	0.893	0.966	0.782	1e-172
225427591	393	PREDICTED: auxin-induced protein 5NG4 [V	0.905	0.977	0.742	1e-170
342730594	387	putative auxin-induced protein [Camellia	0.882	0.966	0.773	1e-169
449449777	403	PREDICTED: auxin-induced protein 5NG4-li	0.891	0.937	0.732	1e-166
449449779	369	PREDICTED: auxin-induced protein 5NG4-li	0.797	0.915	0.778	1e-156
357517481	381	Auxin-induced protein 5NG4 [Medicago tru	0.889	0.989	0.689	1e-155
296085454	352	unnamed protein product [Vitis vinifera]	0.816	0.982	0.721	1e-154
357484351	384	Auxin-induced protein 5NG4 [Medicago tru	0.849	0.937	0.742	1e-153
356540906	390	PREDICTED: auxin-induced protein 5NG4-li	0.879	0.956	0.711	1e-152
18415262	398	nodulin MtN21 /EamA-like transporter fam	0.841	0.896	0.730	1e-148

>gi|255557795|ref|XP_002519927.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223540973|gb|EEF42531.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/381 (78%), Positives = 336/381 (88%), Gaps = 2/381 (0%)

Query: 44  MEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK 103
           +ERE+ +AH AMA+VQLF GGYHVITKVALNVGVNQLVFCV RDL+ALSILAP+AY REK
Sbjct: 7   VEREIWKAHVAMAMVQLFNGGYHVITKVALNVGVNQLVFCVCRDLIALSILAPLAYIREK 66

Query: 104 RTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMG 163
           R R P+T+RLL SFFFLGLTGIFGNQLLFL+GLSYTNPTYAAAIQPSIPVFTFLLAVMMG
Sbjct: 67  RVRPPITKRLLTSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMG 126

Query: 164 TERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVG 223
           TERVNL  TEGQAK+GGT +CVSGAILMVLFRGPA FG   E F   +E+  +GQPEP G
Sbjct: 127 TERVNLFKTEGQAKLGGTLVCVSGAILMVLFRGPAFFGYSEEVFA-TSEISAKGQPEPAG 185

Query: 224 WLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM 283
           W LS+F+ IGLD WHLGVLCLIGNCMCMAAF+AIQAP+L KYP+SLSVTAYSY FGA+LM
Sbjct: 186 WFLSSFLYIGLDGWHLGVLCLIGNCMCMAAFLAIQAPVLTKYPASLSVTAYSYGFGALLM 245

Query: 284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPA 343
           VITA F+TN STEWSLTQSEL+AVIYAGI+ASA+NYGL+TWSNKILGPALVALYNPLQPA
Sbjct: 246 VITAIFMTNGSTEWSLTQSELWAVIYAGIVASALNYGLLTWSNKILGPALVALYNPLQPA 305

Query: 344 ASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREV-EPLIN 402
           ASAFLS+IFLGSPIYLGS+LGGCLIIAGLY+VTW S+RERQA   I ++VT  V +PLI 
Sbjct: 306 ASAFLSRIFLGSPIYLGSILGGCLIIAGLYLVTWASHRERQAFAGIISYVTARVSDPLIQ 365

Query: 403 KDAAVSKTPFQRAHVFATKSN 423
           KDA+ +K  +QR H+ +  S+
Sbjct: 366 KDASANKGAYQRGHMQSASSS 386

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427591|ref|XP_002268531.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/384 (74%), Positives = 331/384 (86%)

Query: 41  SLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYF 100
           S S+  E  +AH AMALVQLF GGYHVITKVALNVG+NQLVFCVFRDL+ALSILAPIAY 
Sbjct: 4   SSSLGSEAWKAHAAMALVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPIAYV 63

Query: 101 REKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV 160
           REKR R PMT+ ++M+FF LGLTGIFGNQLLFL+GLSYTNPTYAAA QP+IPVFTF+LA 
Sbjct: 64  REKRIRPPMTKPVVMTFFVLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFILAT 123

Query: 161 MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPE 220
           +MGTE VNLL TEGQ KVGGT +CVSGAILMVLFRGP L G    D   ENE+  RGQPE
Sbjct: 124 IMGTETVNLLRTEGQVKVGGTLVCVSGAILMVLFRGPVLIGYSESDPSMENEIIARGQPE 183

Query: 221 PVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGA 280
           P GWL+ +F++ GL QWHLGVLCLIGNC+CMAA++AIQAP+L+KYP+SLSVTAYSYFFGA
Sbjct: 184 PAGWLMYSFMEYGLGQWHLGVLCLIGNCLCMAAYLAIQAPLLKKYPASLSVTAYSYFFGA 243

Query: 281 VLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPL 340
           + MV+TAF +TN+ST+WSLT+SELFAV YAG++ASA+NYGL+TWSNKILGP+LVALYNPL
Sbjct: 244 LFMVVTAFVMTNESTDWSLTKSELFAVCYAGVVASAINYGLLTWSNKILGPSLVALYNPL 303

Query: 341 QPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPL 400
           QPAASAFLS+IFLGSPIYLGS+LGG LIIAGLY+VTW SYRERQA   +  H  R  EPL
Sbjct: 304 QPAASAFLSRIFLGSPIYLGSILGGSLIIAGLYLVTWASYRERQAAMGVIPHAIRASEPL 363

Query: 401 INKDAAVSKTPFQRAHVFATKSND 424
           I+KDA+++K P+QR H+F+  S  
Sbjct: 364 IHKDASLTKIPYQRGHIFSGPSTS 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342730594|gb|AEL33280.1| putative auxin-induced protein [Camellia sinensis]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/376 (77%), Positives = 325/376 (86%), Gaps = 2/376 (0%)

Query: 47  EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR 106
           E  RAH AM +VQL YGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAY REKR R
Sbjct: 8   EARRAHAAMVVVQLCYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYVREKRVR 67

Query: 107 LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
            PMTR LL SFFFLGLTGIFGNQLLFLLGL YTNPTYAAA QP+IPVFTF+LAVMMGTE 
Sbjct: 68  PPMTRGLLTSFFFLGLTGIFGNQLLFLLGLGYTNPTYAAATQPAIPVFTFILAVMMGTET 127

Query: 167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
           VNLL TEGQAKVGGT +CVSGAI MVLFRGPAL G    DFV +NE+  RGQPEP GWL+
Sbjct: 128 VNLLRTEGQAKVGGTLVCVSGAIFMVLFRGPALIGYKESDFVAQNEISARGQPEPAGWLM 187

Query: 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
           S+F+D GLD WHLGV+CLIGNCMCMAA++AIQAP+L KYP+SLSVTAYSYFFGA+LMV T
Sbjct: 188 SSFMDFGLDHWHLGVVCLIGNCMCMAAYLAIQAPLLAKYPASLSVTAYSYFFGALLMVTT 247

Query: 287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASA 346
           AFF+TN+S +WSLTQSE+FAV YAGI+ASA+NYGL+TWSNKILGPALVALYNPLQPAASA
Sbjct: 248 AFFMTNESIDWSLTQSEIFAVFYAGIVASALNYGLLTWSNKILGPALVALYNPLQPAASA 307

Query: 347 FLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAA 406
            LS+IFLGSPIYLGS+LGG LIIAGLY+VTW SYRE+Q    I  H+TR  EPL  +D +
Sbjct: 308 LLSRIFLGSPIYLGSILGGFLIIAGLYLVTWASYREKQEAMGIIPHITRPFEPL--RDLS 365

Query: 407 VSKTPFQRAHVFATKS 422
           ++K P+Q   +F+  S
Sbjct: 366 LNKIPYQIGQIFSGPS 381

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449777|ref|XP_004142641.1| PREDICTED: auxin-induced protein 5NG4-like isoform 1 [Cucumis sativus] gi|449500642|ref|XP_004161156.1| PREDICTED: auxin-induced protein 5NG4-like isoform 1 [Cucumis sativus]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 277/378 (73%), Positives = 324/378 (85%)

Query: 47  EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR 106
           +V RAH AMALVQL  GGYHVITKVALNVG+NQLVFC+FRDLLAL+ILAP+AY REKR R
Sbjct: 21  DVSRAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAYVREKRIR 80

Query: 107 LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
           LPMTR LL+SFF LGLTGIFGNQLLFL+GL YTNPTYAAAIQP+IPVFTFL AVMMGTE 
Sbjct: 81  LPMTRDLLISFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTES 140

Query: 167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
           VNLL  EGQAKVGGT +CVSGAI+MVLFRGPAL G    D +  NE+  RGQPEP GWL+
Sbjct: 141 VNLLKLEGQAKVGGTLVCVSGAIVMVLFRGPALIGNTESDLMSHNEISARGQPEPAGWLM 200

Query: 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
           SNF++ GLD +H+GVLCLIGNCMCMAAF+AIQA +L+KYP++LSVTAYSY FG +LMVIT
Sbjct: 201 SNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGVILMVIT 260

Query: 287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASA 346
           +FF+TN+ST+W+LTQSE FAV+Y G+ ASA+NYGL+TW NKILGPALVALYNPLQPAASA
Sbjct: 261 SFFMTNESTDWNLTQSEFFAVLYGGVFASAINYGLLTWCNKILGPALVALYNPLQPAASA 320

Query: 347 FLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAA 406
            LS++F+GSPIYLGS+LGG LIIAGLY+VTW S+RERQ   V+  H TR  EPLI+KD+ 
Sbjct: 321 LLSRVFIGSPIYLGSILGGSLIIAGLYLVTWASHRERQTTTVLLPHSTRSSEPLIHKDSL 380

Query: 407 VSKTPFQRAHVFATKSND 424
            +K  +Q  H+F+  ++ 
Sbjct: 381 TNKFAYQIGHIFSGSASS 398

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449779|ref|XP_004142642.1| PREDICTED: auxin-induced protein 5NG4-like isoform 2 [Cucumis sativus] gi|449500645|ref|XP_004161157.1| PREDICTED: auxin-induced protein 5NG4-like isoform 2 [Cucumis sativus]

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 263/338 (77%), Positives = 301/338 (89%)

Query: 47  EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR 106
           +V RAH AMALVQL  GGYHVITKVALNVG+NQLVFC+FRDLLAL+ILAP+AY REKR R
Sbjct: 21  DVSRAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAYVREKRIR 80

Query: 107 LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
           LPMTR LL+SFF LGLTGIFGNQLLFL+GL YTNPTYAAAIQP+IPVFTFL AVMMGTE 
Sbjct: 81  LPMTRDLLISFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTES 140

Query: 167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
           VNLL  EGQAKVGGT +CVSGAI+MVLFRGPAL G    D +  NE+  RGQPEP GWL+
Sbjct: 141 VNLLKLEGQAKVGGTLVCVSGAIVMVLFRGPALIGNTESDLMSHNEISARGQPEPAGWLM 200

Query: 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
           SNF++ GLD +H+GVLCLIGNCMCMAAF+AIQA +L+KYP++LSVTAYSY FG +LMVIT
Sbjct: 201 SNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGVILMVIT 260

Query: 287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASA 346
           +FF+TN+ST+W+LTQSE FAV+Y G+ ASA+NYGL+TW NKILGPALVALYNPLQPAASA
Sbjct: 261 SFFMTNESTDWNLTQSEFFAVLYGGVFASAINYGLLTWCNKILGPALVALYNPLQPAASA 320

Query: 347 FLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
            LS++F+GSPIYLGS+LGG LIIAGLY+VTW S+RERQ
Sbjct: 321 LLSRVFIGSPIYLGSILGGSLIIAGLYLVTWASHRERQ 358

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517481|ref|XP_003629029.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355523051|gb|AET03505.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/387 (68%), Positives = 324/387 (83%), Gaps = 10/387 (2%)

Query: 42  LSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFR 101
           + +  ++ +AH AMA+VQLF GGYHVITK+ALNVGVNQ+VFCVFRDLLALSILAPIA+FR
Sbjct: 1   MGLGGDIWKAHSAMAVVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFR 60

Query: 102 EKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVM 161
           E+RTR P+T+ L+ SFFFLGLTGIFGN LLFL+GLSYTNPTYAAAIQP+ PVFTFLLA+M
Sbjct: 61  ERRTRPPLTKSLVTSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAIM 120

Query: 162 MGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEP 221
           MGTERVNLL  EG AKVGG  +CV GA++MVL+RGPAL G    D +  +E+  RGQPEP
Sbjct: 121 MGTERVNLLRYEGLAKVGGILVCVLGALVMVLYRGPALVGYSEMDLISHSEITARGQPEP 180

Query: 222 VGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAV 281
            GWL+S  +++GLD +H+GVLCLIGNCMCMA F++IQAPIL+KYP++LSVTAYSYFFGA+
Sbjct: 181 SGWLVSGLMNLGLDHFHVGVLCLIGNCMCMATFLSIQAPILKKYPANLSVTAYSYFFGAL 240

Query: 282 LMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQ 341
           LMV T++F+T++ST+WSLTQSE FAV+YAGIIASA+NYG+ITWSNKILGPA+VALYNPLQ
Sbjct: 241 LMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQ 300

Query: 342 PAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPP-VITTHVTREVEPL 400
           P A+A LS+IF+GSPIY+GSVLGG LII GLY VTW SYRERQA   VI  H ++ V   
Sbjct: 301 PGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVIPHHSSKRVA-- 358

Query: 401 INKDAAVSKTPFQRAHVF---ATKSND 424
                ++ KT F R ++F   +TK +D
Sbjct: 359 ----ESLHKTSFPRVNIFSGLSTKPSD 381

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085454|emb|CBI29186.3| unnamed protein product [Vitis vinifera]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/370 (72%), Positives = 309/370 (83%), Gaps = 24/370 (6%)

Query: 55  MALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLL 114
           MALVQLF GGYHVITKVALNVG+NQLVFCVFRDL+ALSILAPIAY REKR R PMT+ ++
Sbjct: 1   MALVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPIAYVREKRIRPPMTKPVV 60

Query: 115 MSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEG 174
           M+FF LGLTGIFGNQLLFL+GLSYTNPTYAAA QP+IPVFTF+LA +MGTE VNLL TEG
Sbjct: 61  MTFFVLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFILATIMGTETVNLLRTEG 120

Query: 175 QAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGL 234
           Q KVGGT +CVSGAILMVLFRGP L G                         S+F++ GL
Sbjct: 121 QVKVGGTLVCVSGAILMVLFRGPVLIG------------------------YSDFMEYGL 156

Query: 235 DQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDS 294
            QWHLGVLCLIGNC+CMAA++AIQAP+L+KYP+SLSVTAYSYFFGA+ MV+TAF +TN+S
Sbjct: 157 GQWHLGVLCLIGNCLCMAAYLAIQAPLLKKYPASLSVTAYSYFFGALFMVVTAFVMTNES 216

Query: 295 TEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLG 354
           T+WSLT+SELFAV YAG++ASA+NYGL+TWSNKILGP+LVALYNPLQPAASAFLS+IFLG
Sbjct: 217 TDWSLTKSELFAVCYAGVVASAINYGLLTWSNKILGPSLVALYNPLQPAASAFLSRIFLG 276

Query: 355 SPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVSKTPFQR 414
           SPIYLGS+LGG LIIAGLY+VTW SYRERQA   +  H  R  EPLI+KDA+++K P+QR
Sbjct: 277 SPIYLGSILGGSLIIAGLYLVTWASYRERQAAMGVIPHAIRASEPLIHKDASLTKIPYQR 336

Query: 415 AHVFATKSND 424
            H+F+  S  
Sbjct: 337 GHIFSGPSTS 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484351|ref|XP_003612463.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355513798|gb|AES95421.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/361 (74%), Positives = 303/361 (83%), Gaps = 1/361 (0%)

Query: 44  MEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK 103
           M  +  +AH AMA+VQLF GGYHVITKVALNVGVNQLVFC++RDLLALSILAPIAY REK
Sbjct: 5   MGSDTWKAHLAMAMVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALSILAPIAYIREK 64

Query: 104 RTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMG 163
           RTR P+T+ LL SFFFLGLTGIFGNQLLFL+GLSYTNPTYAAA QP+IPVFTFL AV+MG
Sbjct: 65  RTRPPITKNLLTSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLFAVIMG 124

Query: 164 TERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVG 223
           TERVNLL +EG AKV GT ICVSGA+LMVLFRGP + G    D V  NE+  RGQPEP G
Sbjct: 125 TERVNLLRSEGLAKVLGTLICVSGAVLMVLFRGPIVIGYSEIDHVARNEISARGQPEPSG 184

Query: 224 WLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM 283
           W +   +D+GLD +HLGVLCLIGNCMCMAAF+AIQAP+L+KYP++LSVTAYSYFFGA LM
Sbjct: 185 WFVGGLLDLGLDHFHLGVLCLIGNCMCMAAFLAIQAPVLKKYPANLSVTAYSYFFGAALM 244

Query: 284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPA 343
           V  +F +TN+ST+WSLT SE+ AVIYAGIIASA+NYGLITW NKILGPALVALYNPLQPA
Sbjct: 245 VAVSFLMTNESTDWSLTSSEILAVIYAGIIASALNYGLITWCNKILGPALVALYNPLQPA 304

Query: 344 ASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINK 403
            SA LS++FLGSPIYLGS++GG  IIAGLY VTW SYRER A   +  H   E EPLI+ 
Sbjct: 305 FSALLSRMFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERHATVGVIPH-GWEAEPLIHD 363

Query: 404 D 404
            
Sbjct: 364 K 364

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540906|ref|XP_003538925.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 269/378 (71%), Positives = 312/378 (82%), Gaps = 5/378 (1%)

Query: 41  SLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYF 100
           ++++  ++ +AH AMA VQLF GGYHVITKVALNVG+NQLVFCVFRDLLALSILAP+AY 
Sbjct: 5   TVAVGGDIWKAHVAMAFVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYV 64

Query: 101 REKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV 160
           REKR R P T+ LL+SFFFLGLTGIFGNQLLFL+GLSYTNPTYAAAIQPSIPVFTFLLAV
Sbjct: 65  REKRIRPPTTKNLLISFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAV 124

Query: 161 MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPE 220
           MMGTERVNLL  +G AKVGGT ICVSGAI MVL+RGPAL G      V +NE+  RGQPE
Sbjct: 125 MMGTERVNLLRYDGLAKVGGTIICVSGAIFMVLYRGPALIGYAELGHVTQNEISARGQPE 184

Query: 221 PVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGA 280
           P GWL+    ++G D +HLGVLCLIGNC+CMAAF+AIQA +L+KYP++LSVTA SYFFGA
Sbjct: 185 PSGWLIGGLQNLGFDNFHLGVLCLIGNCICMAAFLAIQASVLKKYPANLSVTACSYFFGA 244

Query: 281 VLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPL 340
           +LMV  + F+T +ST+WSLT SE+ AVIYAG IASA+NYGLITW NKI+GPA+VALYNPL
Sbjct: 245 LLMVTVSLFMTTESTDWSLTSSEILAVIYAGSIASALNYGLITWCNKIIGPAMVALYNPL 304

Query: 341 QPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPL 400
           QPA SA LS+IFLGSPIYLGS++GG  IIAGLYMVTW S RERQA   +T H +   EPL
Sbjct: 305 QPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYMVTWASSRERQATVGVTPHSSWVSEPL 364

Query: 401 INKDAAVSKTPFQRAHVF 418
           I++ +A      QR  VF
Sbjct: 365 IHERSA-----HQRGLVF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18415262|ref|NP_567580.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|16974593|gb|AAL31201.1| AT4g19180/T18B16_150 [Arabidopsis thaliana] gi|23506177|gb|AAN31100.1| At4g19180/T18B16_150 [Arabidopsis thaliana] gi|26449961|dbj|BAC42101.1| unknown protein [Arabidopsis thaliana] gi|51969072|dbj|BAD43228.1| unknown protein [Arabidopsis thaliana] gi|332658756|gb|AEE84156.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/360 (73%), Positives = 301/360 (83%), Gaps = 3/360 (0%)

Query: 45  EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKR 104
           ER+   AH AMA VQLF GGYHVITKVALNVGVNQLVFCV RDLLALSILAP+AYFRE++
Sbjct: 15  ERDARMAHTAMAFVQLFNGGYHVITKVALNVGVNQLVFCVCRDLLALSILAPLAYFRERK 74

Query: 105 TRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGT 164
            R PM + LL+SFFFLGL G+FGNQLLFL+GL+YTNPTYAAAIQPSIPVFTFLLAVMMGT
Sbjct: 75  IRTPMNKSLLLSFFFLGLAGVFGNQLLFLIGLTYTNPTYAAAIQPSIPVFTFLLAVMMGT 134

Query: 165 ERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGW 224
           ERVNLL  EGQ KVGGT +CV GA+ MV+FRGPAL G  + DF   NE+  +GQPEP GW
Sbjct: 135 ERVNLLRIEGQTKVGGTLVCVMGAVFMVVFRGPALLGDKDADFAMNNEISAKGQPEPTGW 194

Query: 225 LLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV 284
           L+S F+D+G +QWH+GVLCLIGNCMCMA F+AIQAP+L+KYP++LSV A SYFFG VLM 
Sbjct: 195 LVSGFLDLGFEQWHIGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVAALSYFFGTVLMC 254

Query: 285 ITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAA 344
            TAFF+  +  +W LTQSE+ AVIYAG+IASA+NYGL+TWSNKI+GPALVALYNPLQPAA
Sbjct: 255 TTAFFMVKEPLDWKLTQSEVLAVIYAGVIASALNYGLLTWSNKIIGPALVALYNPLQPAA 314

Query: 345 SAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPV---ITTHVTREVEPLI 401
           SAFLS+IFLGSPIYLGSV+GG  II GLYMVTW S+RER+       I  H  +  EPLI
Sbjct: 315 SAFLSRIFLGSPIYLGSVVGGFFIILGLYMVTWASFRERKTAVSGIGIAPHGLKTSEPLI 374

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	424
TAIR|locus:505006500	398	UMAMIT2 "Usually multiple acid	0.841	0.896	0.716	4e-138
TAIR|locus:2077162	385	UMAMIT3 "Usually multiple acid	0.875	0.963	0.685	1.4e-133
TAIR|locus:2163513	381	UMAMIT1 "Usually multiple acid	0.846	0.942	0.690	2.4e-131
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.863	0.940	0.365	1.6e-61
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.778	0.804	0.365	1e-59
TAIR|locus:2102028	369	UMAMIT6 "Usually multiple acid	0.764	0.878	0.366	1.3e-54
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.785	0.869	0.337	8.1e-44
TAIR|locus:2118686	373	UMAMIT34 "AT4G30420" [Arabidop	0.728	0.828	0.326	1.2e-42
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.775	0.845	0.322	3.3e-40
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.759	0.800	0.305	5.3e-40

TAIR|locus:505006500 UMAMIT2 "Usually multiple acids move in and out Transporters 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
 Identities = 258/360 (71%), Positives = 293/360 (81%)

Query:    45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKX 104
             ER+   AH AMA VQLF GGYHVITKVALNVGVNQLVFCV RDLLALSILAP+AYFRE+ 
Sbjct:    15 ERDARMAHTAMAFVQLFNGGYHVITKVALNVGVNQLVFCVCRDLLALSILAPLAYFRERK 74

Query:   105 XXXXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGT 164
                        SFFFLGL G+FGNQLLFL+GL+YTNPTYAAAIQPSIPVFTFLLAVMMGT
Sbjct:    75 IRTPMNKSLLLSFFFLGLAGVFGNQLLFLIGLTYTNPTYAAAIQPSIPVFTFLLAVMMGT 134

Query:   165 ERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGW 224
             ERVNLL  EGQ KVGGT +CV GA+ MV+FRGPAL G  + DF   NE+  +GQPEP GW
Sbjct:   135 ERVNLLRIEGQTKVGGTLVCVMGAVFMVVFRGPALLGDKDADFAMNNEISAKGQPEPTGW 194

Query:   225 LLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV 284
             L+S F+D+G +QWH+GVLCLIGNCMCMA F+AIQAP+L+KYP++LSV A SYFFG VLM 
Sbjct:   195 LVSGFLDLGFEQWHIGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVAALSYFFGTVLMC 254

Query:   285 ITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAA 344
              TAFF+  +  +W LTQSE+ AVIYAG+IASA+NYGL+TWSNKI+GPALVALYNPLQPAA
Sbjct:   255 TTAFFMVKEPLDWKLTQSEVLAVIYAGVIASALNYGLLTWSNKIIGPALVALYNPLQPAA 314

Query:   345 SAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPV---ITTHVTREVEPLI 401
             SAFLS+IFLGSPIYLGSV+GG  II GLYMVTW S+RER+       I  H  +  EPLI
Sbjct:   315 SAFLSRIFLGSPIYLGSVVGGFFIILGLYMVTWASFRERKTAVSGIGIAPHGLKTSEPLI 374

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2077162 UMAMIT3 "Usually multiple acids move in and out Transporters 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
 Identities = 262/382 (68%), Positives = 307/382 (80%)

Query:    43 SMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFRE 102
             ++ERE  +AH AM  VQLF GGYHVITKVALNVGVNQLVFCVFRDL+ALSILAP+AY R+
Sbjct:     4 TVEREAWKAHVAMIGVQLFNGGYHVITKVALNVGVNQLVFCVFRDLIALSILAPLAYIRD 63

Query:   103 KXXXXXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM 162
             K            +FFFLGLTGIFGNQLLFL+GL+YTNPTYAAAIQPSIPVFTF+LA++M
Sbjct:    64 KRTRPPLNRQFLLAFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAIQPSIPVFTFILALIM 123

Query:   163 GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPV 222
             GTER+NL   EGQAKVGGT ICV+GA+LMVLFRG ALFG    + +G  E R     E  
Sbjct:   124 GTERLNLFKLEGQAKVGGTLICVAGAVLMVLFRGLALFGETEAESLGHGESR---HTETS 180

Query:   223 GWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL 282
             G  +S F + GL +W+LGVLCLIGNC CMAAF+AIQAP+L+KYP++LSVTAYSYFFG + 
Sbjct:   181 GHFMSGFFN-GLGRWNLGVLCLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSYFFGTMF 239

Query:   283 MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQP 342
             MV +AFF+TN+ST WSLT+SE FAV+YAG+IASA+NYGL+TWSNKILGP+LVALYNPLQP
Sbjct:   240 MVTSAFFMTNESTNWSLTRSEFFAVVYAGVIASALNYGLLTWSNKILGPSLVALYNPLQP 299

Query:   343 AASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITT-HVT-REVEPL 400
             AASAFLS+IFLGSPIYLGS+LGGC IIAGLY VTW SY+E++A   +    +T +E EPL
Sbjct:   300 AASAFLSRIFLGSPIYLGSILGGCAIIAGLYSVTWASYKEKKAAAAMAVIPITSKEAEPL 359

Query:   401 INKDAAVSKTPFQRAHVFATKS 422
             I KD      P    H+F TKS
Sbjct:   360 IYKDH--KNKPI--GHLF-TKS 376

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2163513 UMAMIT1 "Usually multiple acids move in and out Transporters 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
 Identities = 252/365 (69%), Positives = 288/365 (78%)

Query:    45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKX 104
             ERE   AH AM LVQ+  GGYHV+TKVALNVGVNQLVFCVFRDLLALSILAP+A+FRE+ 
Sbjct:    14 ERETRMAHSAMTLVQVINGGYHVVTKVALNVGVNQLVFCVFRDLLALSILAPLAFFRERT 73

Query:   105 XXXXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGT 164
                        S FFLGL GIFGNQLLFL+GLSYTNPTYAAAIQPSIPVFTFLLAV+MGT
Sbjct:    74 IRPPMNRSIFFSLFFLGLAGIFGNQLLFLMGLSYTNPTYAAAIQPSIPVFTFLLAVLMGT 133

Query:   165 ERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRV-RGQPEPVG 223
             E+VNLL  EGQ KVGGT +CVSGAI M LFRGPALFG G +       V + R QPE  G
Sbjct:   134 EKVNLLKVEGQTKVGGTLVCVSGAIAMALFRGPALFG-GKDAADSVKSVIIDRSQPELNG 192

Query:   224 WLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM 283
             WL+S+F+ +G DQWH+GVLCLIGNCMCMAAF+A+QAP+L+KYP+ LSV AYSYFFGA +M
Sbjct:   193 WLVSSFLGLGFDQWHIGVLCLIGNCMCMAAFLAVQAPVLKKYPAYLSVAAYSYFFGASIM 252

Query:   284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPA 343
             + TA     +  +WSLTQSE+ AVI+AG+ ASA+NYGL+TWSNKILG ALV+LYNPLQPA
Sbjct:   253 ITTAILFVREPKDWSLTQSEVLAVIFAGVFASALNYGLLTWSNKILGAALVSLYNPLQPA 312

Query:   344 ASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPP----VITTHVTREVEP 399
              SAFLS IFLGSPIYLGSVLGG LII GLYMVTW SYRE+Q       + ++   R  EP
Sbjct:   313 TSAFLSTIFLGSPIYLGSVLGGILIICGLYMVTWASYREQQTTSAGNEIASSSDVRISEP 372

Query:   400 LINKD 404
              I +D
Sbjct:   373 FIYRD 377

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 139/380 (36%), Positives = 215/380 (56%)

Query:    32 DETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLAL 91
             D T N +  SL    E L+ H AM  +Q  Y G+HV+++ ALN+G+++LVF V+R+++AL
Sbjct:     3 DNTDNRR--SLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAL 60

Query:    92 SILAPIAYFREKXXXXXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSI 151
              +L P AYF EK             FFFL L GI  NQ  +LLGL  T+PT+A+++Q S+
Sbjct:    61 LLLLPFAYFLEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSV 120

Query:   152 PVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGEN 211
             P  TFL+A ++  E+V +   +G +K+ GT +CV+GA ++ L++GP ++   +   +  +
Sbjct:   121 PAITFLMAALLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASH--LHAH 178

Query:   212 EVRVRGQP-EPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLS 270
              +        P+G       +     W LG + LIG+C+  + ++  QAP+L+ YP+ LS
Sbjct:   179 LLTTNSAVLAPLG-------NAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLS 231

Query:   271 VTAYSYFFGAVLMVITAFFLTNDSTEWSLTQS-ELFAVIYAGIIASAVNYGLITWSNKIL 329
             VT+Y+ FFG +  +I A F   DS  W      ELF ++YAGI+AS + + +  W     
Sbjct:   232 VTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRG 291

Query:   330 GPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVI 389
             GP  VA+Y P+Q    A ++ I LG   YLG ++G  LIIAGLY V +    ER+   + 
Sbjct:   292 GPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAALE 351

Query:   390 TTHVTREVEPLINKDAAVSK 409
                +    E  I + A VS+
Sbjct:   352 KAAIQSSAEHGIER-APVSR 370

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 124/339 (36%), Positives = 193/339 (56%)

Query:    47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXX 106
             E ++ H AM  +Q  Y G+H++++ ALN+GV+++VF V+R++LAL ++ P AYF EK   
Sbjct:    15 ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query:   107 XXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
                       FF L L GI G   +  L +    PT+A+AIQ S+P  TF++A  +  E+
Sbjct:    75 PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEK 134

Query:   167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
             V++   +G AK+ GT  CVSGA ++ L++GP +      +     EV         G   
Sbjct:   135 VHISRRDGLAKIIGTVACVSGATIITLYKGPPITHIWRPNL----EVTASYFKAFQG--- 187

Query:   227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286
              N +    + W LG + L+GNC+  + +I +QAP+L++YP+ LSVT+++ FFG +  +I 
Sbjct:   188 -NDLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLII 246

Query:   287 AFFLTNDSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAAS 345
             A F   D   W + +  ELF ++YAG +AS + + +  W     GP  VA+Y P+Q  A 
Sbjct:   247 AAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAV 306

Query:   346 AFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
             A ++ I LG   YLG + G  LII GLY+V W    E++
Sbjct:   307 AIMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKR 345

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

TAIR|locus:2102028 UMAMIT6 "Usually multiple acids move in and out Transporters 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 125/341 (36%), Positives = 195/341 (57%)

Query:    47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXX 106
             E  + H AM + Q  Y G HVI + ALN+GV++LVF ++R ++A S+LAP AYF EK   
Sbjct:     6 ERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFLEKKER 65

Query:   107 XXXXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166
                       FF LGL GI  NQ  ++ GL  T+PT+A+A +  +P  +FL+A ++G E+
Sbjct:    66 PAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAALLGIEK 125

Query:   167 VNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLL 226
             V     +G AKV GT + V+G++++ L++GP ++          N V    +PE      
Sbjct:   126 VEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQ------PSLNIVNQTIKPEEAEEEN 179

Query:   227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV-I 285
              N        W LG LCL+G+C+C +++I +Q+P+L+KYP+  S  +YS FF  +    I
Sbjct:   180 KN--------WTLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGI 231

Query:   286 TAFFLTNDSTEWSLTQS-ELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAA 344
             +A+F   D   W +    EL+A++Y G++ SA+ + +  +  +  GP  V+ Y PLQ   
Sbjct:   232 SAYF-ERDLERWKIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLI 290

Query:   345 SAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQA 385
             +A L+ + LG   YLG ++G  LI++GLY+V      E QA
Sbjct:   291 AAVLATLALGEHFYLGGLIGAILIMSGLYLVVMGKSWENQA 331

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 124/367 (33%), Positives = 190/367 (51%)

Query:    54 AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXXXXXXXXX 113
             A+  +Q  + G+H++++VALN+GV+++V+ V+R+LLAL ++ P AYF EK          
Sbjct:    38 ALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTISL 97

Query:   114 XXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTE 173
                FFFL L GI  NQ  +LLGL Y  PT+A+A+Q S+P  TF++A  +  E ++L+   
Sbjct:    98 LAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRKH 157

Query:   174 GQAKVGGTFICVSGAILMVLFRGPALFGCG----NEDFVGENEVRVRGQPEPVGWLLSNF 229
             G AKV GT + + GA ++ L+RG  +F  G     E+ VG +          +GWL   +
Sbjct:   158 GVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDN----SHSLTLGWL---Y 210

Query:   230 IDIGLDQWHLGVLCLI-GNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAF 288
             + +G    H    CL     M + A +  Q P   K   + S T +  F     +VI  F
Sbjct:   211 L-MG----H----CLSWAGWMVLQAPVLKQYPA--KLTLT-SFTCF--FGLIQFLVIALF 256

Query:   289 FLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFL 348
               T+ +    ++  ELF ++YAGIIAS +   L TW     GP  VA++ PLQ    A +
Sbjct:   257 VETDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAM 316

Query:   349 SKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRER--------QAPPVITTHVTREVEPL 400
             + + LG  +Y G ++G   I+ GLY+V W    ER        Q P  +T H+       
Sbjct:   317 AFLILGDQLYSGGIVGAVFIMLGLYLVLWGKNEERKLALEESQQDPESLTKHLLEAQHKK 376

Query:   401 INKDAAV 407
              N ++ V
Sbjct:   377 SNSESEV 383

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2118686 UMAMIT34 "AT4G30420" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 107/328 (32%), Positives = 164/328 (50%)

Query:    54 AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXXXXXXXXX 113
             AM ++QL Y G  +  +  L  G++  VF ++R   A   + P  Y   +          
Sbjct:     2 AMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSLD 61

Query:   114 XXSF---FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLL 170
               SF   F + L GI  NQ L+L GL  T+ +  +A+   IP  TFL++ + G E++NL 
Sbjct:    62 LKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNLR 121

Query:   171 TTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFI 230
                G AK+ GT +CV+GAI M L RGP +          E+ + +         +L +  
Sbjct:   122 DIRGLAKIAGTILCVAGAISMTLLRGPKILN-------SESALPIAKS------VLGHLK 168

Query:   231 DIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL 290
             D   + W +G L L  + +C + ++ +Q PI   YP +LS++A+   FG +   +  FFL
Sbjct:   169 D--QNTWLIGCLFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFL 226

Query:   291 TNDSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLS 349
               D   W L + SE    +YAGI ASA+++ +  W+    GP   AL+NPL       L+
Sbjct:   227 EKDPNAWILHSYSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILA 286

Query:   350 KIFLGSPIYLGSVLGGCLIIAGLYMVTW 377
              +F    IY GS++GG  +I GLY V W
Sbjct:   287 ALFFHEEIYTGSLIGGLGVILGLYTVLW 314

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 109/338 (32%), Positives = 166/338 (49%)

Query:    49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXXXX 108
             L+ + AM  +Q  Y G ++IT V+L  G+N  V  V+R  +A +++AP A F E+     
Sbjct:     9 LKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPK 68

Query:   109 XXXXXXXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVN 168
                        LG      +Q L+ +G++YT+ T+A+A    +P  TF+LA++   E VN
Sbjct:    69 MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVN 128

Query:   169 LLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSN 228
                    AKV GT I VSGA+LM L++GP +      DF+        G  +  G     
Sbjct:   129 FKKVRSIAKVVGTVITVSGALLMTLYKGPIV------DFIRFGGGGGGGS-DGAGGSHGG 181

Query:   229 FIDIGLDQ-WHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITA 287
                  +D+ W  G L L+G     A F  +Q+  L++YP+ LS+T      G +     +
Sbjct:   182 AGAAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVS 241

Query:   288 FFLTNDSTEWSLT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASA 346
                  D + W +   S LFA  Y+G+I S V Y +     +  GP  VA +NPL    +A
Sbjct:   242 LVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITA 301

Query:   347 FLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
              L  + L   I+LGSV+G   II GLY V W   ++++
Sbjct:   302 ALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKR 339

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 102/334 (30%), Positives = 166/334 (49%)

Query:    54 AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKXXXXXXXXXX 113
             AM  +Q  Y G ++ITK++LN G++  V  V+R  +A +++AP A+F E+          
Sbjct:    21 AMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSI 80

Query:   114 XXSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTE 173
                 F LGL G   +Q  + +GL YT+PT++ A+   +P  TF+LAV+   E ++L    
Sbjct:    81 FMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLW 140

Query:   174 GQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIG 233
              QAK+ GT + V+GA+LM +++GP +      +      + ++           N     
Sbjct:   141 CQAKIAGTVVTVAGAMLMTIYKGPIV------ELFWTKYMHIQDSSHANTTSSKNSSS-- 192

Query:   234 LDQWHL-GVLCLIGNCMCMAAFIAIQAPILRKYPS-SLSVTAYSYFFGAVLMVITAFFLT 291
              D+  L G + LI   +  A+   +QA IL+ Y    LS+T    F G +  V   F + 
Sbjct:   193 -DKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVME 251

Query:   292 NDSTEWSLT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSK 350
             ++ + W +     L A  Y+GI+AS+++Y +     K  GP     ++PL     A +  
Sbjct:   252 HNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGS 311

Query:   351 IFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384
               L   I+LG V+G  LI+ GLY V W   +E Q
Sbjct:   312 FVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQ 345

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W4R9	WTR35_ARATH	No assigned EC number	0.7305	0.8419	0.8969	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	424
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-28
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-12
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-11
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	5e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	8e-06

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  114 bits (286), Expect = 2e-28
 Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 20/328 (6%)

Query: 54  AMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRL 113
           AM   +    G   + KVA + G+N   F  +  LLA  +L P  +F  +   LP     
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 114 LMSFFFLGLTGIFGNQLLFL--LGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLT 171
           ++S   +GL G  G+  +    +G+ Y+NPT A+AI    P  TF+LA++   E+V+   
Sbjct: 77  ILSK--IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE 134

Query: 172 TEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFID 231
               AKV GT + + GA++++ + GP +F   +  ++       R    P+    S+++ 
Sbjct: 135 RSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLN-----FRQLSPPLSSSNSDWL- 188

Query: 232 IGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVT-AYSYFFGAVLMVITAFFL 290
           IG      G L  I       +FI +QA I+ +YP++ +V+  Y+     V  +I     
Sbjct: 189 IG------GALLTIQGIFVSVSFI-LQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE 241

Query: 291 TNDSTEWSLT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLS 349
            N+ + W +     L  ++   II S V Y + +W+ +  GP  +A++ PL    +  + 
Sbjct: 242 KNNPSVWIIHFDITLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMG 300

Query: 350 KIFLGSPIYLGSVLGGCLIIAGLYMVTW 377
            IFL   +YLG ++GG LI  G Y V W
Sbjct: 301 AIFLNDSLYLGCLIGGILITLGFYAVMW 328

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 77/335 (22%), Positives = 138/335 (41%), Gaps = 49/335 (14%)

Query: 44  MEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK 103
           M+R +L    A+ L  L +G   +  K+A+      L     R L+A  +L P+      
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-- 58

Query: 104 RTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM- 162
              L    R  +    L L G+    LL  L L YT+ + A+ I   +P+FT LLAV++ 
Sbjct: 59  PRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL 118

Query: 163 GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPV 222
             ER++LL      ++ G  + ++G +L++L  G                          
Sbjct: 119 LGERLSLL------QILGILLALAGVLLILLGGG-------------------------- 146

Query: 223 GWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL 282
                     G     LG+L  +   +  A + A+   + R         A        L
Sbjct: 147 ---------GGGILSLLGLLLALAAALLWALYTALVKRLSR---LGPVTLALLLQLLLAL 194

Query: 283 MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQP 342
           +++  FFL+               ++Y G+ ++ + Y L  ++ ++LG +LVAL + L+P
Sbjct: 195 LLLLLFFLSGFGAPILSRA--WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEP 252

Query: 343 AASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377
             +A L  + LG P+    +LG  L++ G+ + + 
Sbjct: 253 VFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 251 MAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYA 310
             A   + +  L +  S L+ TAY +    +L+++  F L       SL    + A++Y 
Sbjct: 2   SWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKA--ILALLYL 59

Query: 311 GIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIA 370
           G+  +A+ Y L  ++ K +  +  ++   L P  +  LS + LG  + L  +LG  LI+ 
Sbjct: 60  GLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILL 119

Query: 371 GLYMVTW 377
           G+ ++  
Sbjct: 120 GVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 57/295 (19%), Positives = 109/295 (36%), Gaps = 55/295 (18%)

Query: 80  LVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYT 139
           L F VFR  L  ++L  +   R +     + R LL+    +G+       +L+ + +   
Sbjct: 18  LYFAVFR-RLIFALLLLLPLLRRRPPLKRLLRLLLLGALQIGVF-----YVLYFVAVKRL 71

Query: 140 NPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPAL 199
               AA +    P++  LL+ +MG ER   L              +  A+L        L
Sbjct: 72  PVGEAALLLYLAPLYVTLLSDLMGKERPRKLV-------------LLAAVL-------GL 111

Query: 200 FGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQA 259
            G                       LL +  ++ ++    G+L  +G+ +  A    +  
Sbjct: 112 AGA---------------------VLLLSDGNLSINPA--GLLLGLGSGISFALGTVLYK 148

Query: 260 PILRKYPSSLSVTAYSYFF--GAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAV 317
            +++K    L             +L+    F   N          +  A++Y G+I +A+
Sbjct: 149 RLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN----PQALSLQWGALLYLGLIGTAL 204

Query: 318 NYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGL 372
            Y L      ++ P+  ++    +P  +  L  + LG  + L  ++GG LIIA +
Sbjct: 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 60  LFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFF 119
           L +  Y V +K  L   ++ L F  +R L+A  IL  +  F  ++    ++ + +++  +
Sbjct: 1   LSWALYFVFSKKLLER-ISPLTFTAYRFLIA-GILLILLLFLLRKPFALLSLKAILALLY 58

Query: 120 LGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVG 179
           LGL G     LL+   L Y + + A+ I    PVFT +L+V++  E++ L        + 
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQ------LL 112

Query: 180 GTFICVSGAILMVL 193
           G  + + G +L++L
Sbjct: 113 GIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	424
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.95
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.93
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.91
COG2962	293	RarD Predicted permeases [General function predict	99.9
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.84
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.82
KOG2765	416	consensus Predicted membrane protein [Function unk	99.75
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.7
KOG2766	336	consensus Predicted membrane protein [Function unk	99.6
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.6
KOG1580	337	consensus UDP-galactose transporter related protei	99.6
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.54
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.51
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.5
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
KOG1581	327	consensus UDP-galactose transporter related protei	99.44
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.42
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.38
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.35
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.3
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.19
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.13
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.11
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.08
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.03
PRK13499	345	rhamnose-proton symporter; Provisional	99.03
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.01
KOG1582	367	consensus UDP-galactose transporter related protei	99.01
PRK15430	296	putative chloramphenical resistance permease RarD;	99.0
PRK11272	292	putative DMT superfamily transporter inner membran	99.0
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.96
PRK11689	295	aromatic amino acid exporter; Provisional	98.83
PLN00411	358	nodulin MtN21 family protein; Provisional	98.82
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.81
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.79
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.76
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.74
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.73
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.64
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.62
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.53
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.51
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.48
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.45
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.44
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.36
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.31
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.18
COG2962	293	RarD Predicted permeases [General function predict	98.16
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.15
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.0
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.94
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.84
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.81
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.63
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.6
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.48
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.47
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.41
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.34
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.26
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.23
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.19
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.18
COG2076	106	EmrE Membrane transporters of cations and cationic	97.17
COG2076	106	EmrE Membrane transporters of cations and cationic	97.16
PRK11431	105	multidrug efflux system protein; Provisional	97.14
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.11
KOG2765	416	consensus Predicted membrane protein [Function unk	97.11
PRK11431	105	multidrug efflux system protein; Provisional	97.09
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.87
PRK13499	345	rhamnose-proton symporter; Provisional	96.83
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.7
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.69
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.64
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.63
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.5
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.33
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.13
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.93
KOG1581	327	consensus UDP-galactose transporter related protei	95.66
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.34
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.07
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	94.05
KOG1580	337	consensus UDP-galactose transporter related protei	93.92
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.78
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.39
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.01
KOG1443	349	consensus Predicted integral membrane protein [Fun	88.74
PRK02237	109	hypothetical protein; Provisional	84.0
KOG3912	372	consensus Predicted integral membrane protein [Gen	83.86
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	83.83
PRK02237	109	hypothetical protein; Provisional	83.66
KOG4831	125	consensus Unnamed protein [Function unknown]	82.77
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	82.33
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.3

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=2.4e-34  Score=283.80  Aligned_cols=319  Identities=26%  Similarity=0.476  Sum_probs=248.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccc-ccCcCCHHHHHHHHHHHHHH
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKR-TRLPMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~l~~g~lg  124 (424)
                      +|+.+.+..|++..++++...++.|.+.+.|++|..+.++|+.++.++++++.++++++ .+++.+++++..+.+.|+++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            44668899999999999999999999999999999999999999999999988776442 23334578888899999997


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHH------hhcccccccccccchhhHHHHHHHhHhhhhhccCCc
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM------GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPA  198 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~------l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~  198 (424)
                       ..++.+++.|++|++++.++++.++.|+++.++++++      +|||+++++      ++|++++++|+.++...+++.
T Consensus        89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcc
Confidence             6788899999999999999999999999999999999      589999888      999999999999988544432


Q ss_pred             ccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHH
Q 039506          199 LFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFF  278 (424)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~  278 (424)
                      ....++..+   .+.+++..+.          ..+...+..|++++++++++|++|.++.|+..++++++...++++..+
T Consensus       162 ~~~~~~~~~---~~~~~~~~~~----------~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~  228 (358)
T PLN00411        162 VFVASSPPY---LNFRQLSPPL----------SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVC  228 (358)
T ss_pred             ccccccccc---cccccccccc----------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHH
Confidence            111000000   0000000000          001124567999999999999999999999999987555667777777


Q ss_pred             HHHHHHHHHHHhcCC-Cccccc-chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCC
Q 039506          279 GAVLMVITAFFLTND-STEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSP  356 (424)
Q Consensus       279 ~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~  356 (424)
                      +.+.+.+.....+.. ...|.. .......+++.+++ +.++|.+|++++++.++++++++.+++|+++++++++++||+
T Consensus       229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~  307 (358)
T PLN00411        229 VSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS  307 (358)
T ss_pred             HHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC
Confidence            766666655554422 222221 11224456677765 668999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHhhheeeeecccccCC
Q 039506          357 IYLGSVLGGCLIIAGLYMVTWVSYRERQA  385 (424)
Q Consensus       357 ~~~~~~lG~~lii~g~~l~~~~~~~~~~~  385 (424)
                      +++.+++|+++|++|+++..+.++++.++
T Consensus       308 lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~  336 (358)
T PLN00411        308 LYLGCLIGGILITLGFYAVMWGKANEEKD  336 (358)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            99999999999999999988765555433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=3.2e-30  Score=249.59  Aligned_cols=279  Identities=17%  Similarity=0.188  Sum_probs=233.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      -.+..++..++||.++++.|...+ +++|..++++|+.++.++++++...++++   ..++++++.....|.++...++.
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHHH
Confidence            456688889999999999999888 59999999999999999998887654432   22567788888889887677888


Q ss_pred             HHHHHh-hccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506          131 LFLLGL-SYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG  209 (424)
Q Consensus       131 ~~~~al-~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~  209 (424)
                      +++.+. ++++++.++++.++.|+++.+++++ +|||+++++      ++|++++++|+.++.. ++..           
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~-~~~~-----------  145 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNS-GGNL-----------  145 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhc-Cccc-----------
Confidence            999999 9999999999999999999999986 699999999      9999999999998862 1100           


Q ss_pred             ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506          210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF  289 (424)
Q Consensus       210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  289 (424)
                                               +....|++++++++++||.|.+..|+..++ + +.....++...+.+.+.+....
T Consensus       146 -------------------------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~  198 (292)
T PRK11272        146 -------------------------SGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLL  198 (292)
T ss_pred             -------------------------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHH
Confidence                                     022479999999999999999999997644 3 3456778888888777776655


Q ss_pred             hcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHH
Q 039506          290 LTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLII  369 (424)
Q Consensus       290 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii  369 (424)
                      .+... ....+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++
T Consensus       199 ~~~~~-~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi  277 (292)
T PRK11272        199 SGERL-TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIV  277 (292)
T ss_pred             cCCcc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence            43221 11124578899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhheeeeecc
Q 039506          370 AGLYMVTWVSY  380 (424)
Q Consensus       370 ~g~~l~~~~~~  380 (424)
                      .|+++..+.++
T Consensus       278 ~gv~~~~~~~~  288 (292)
T PRK11272        278 FAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHh
Confidence            99998766443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=2.4e-29  Score=244.35  Aligned_cols=278  Identities=18%  Similarity=0.257  Sum_probs=216.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHH
Q 039506           52 HGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLL  131 (424)
Q Consensus        52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~  131 (424)
                      .++.++++++||.++++.|...++ ++|..+.++|+.++++.++++..  +++    .+++   ..+..|++.....+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~--~~~----~~~~---~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA--RPK----VPLN---LLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc--CCC----CchH---HHHHHHHHHHHHHHHH
Confidence            356888999999999999998885 99999999999998776665432  111    1222   3444455544566677


Q ss_pred             HHHHhhc-cCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506          132 FLLGLSY-TNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE  210 (424)
Q Consensus       132 ~~~al~~-~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~  210 (424)
                      ++.++++ .+++.++++.++.|+++.+++++++|||+++++      ++|++++++|+.++..  ++.  +         
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~--~~~--~---------  136 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE--DSL--N---------  136 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc--ccC--C---------
Confidence            8889998 588999999999999999999999999999999      9999999999999872  110  0         


Q ss_pred             cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc--chhHHHHHHHHHHHHHHHHH
Q 039506          211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSS--LSVTAYSYFFGAVLMVITAF  288 (424)
Q Consensus       211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~  288 (424)
                                            +.+....|++++++++++|++|.+..|+..++.+.+  .....+....+.+.......
T Consensus       137 ----------------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (299)
T PRK11453        137 ----------------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASL  194 (299)
T ss_pred             ----------------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHH
Confidence                                  001234799999999999999999999987655422  22334444444443333333


Q ss_pred             HhcCCCc---cc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHH
Q 039506          289 FLTNDST---EW-SLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLG  364 (424)
Q Consensus       289 ~~~~~~~---~~-~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG  364 (424)
                      ..+.+..   .+ ..+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG  274 (299)
T PRK11453        195 ILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLG  274 (299)
T ss_pred             HhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHH
Confidence            3332211   11 2356789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhheeeeecc
Q 039506          365 GCLIIAGLYMVTWVSY  380 (424)
Q Consensus       365 ~~lii~g~~l~~~~~~  380 (424)
                      ++++++|+++..+.++
T Consensus       275 ~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        275 AVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHhcchh
Confidence            9999999998776543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=1.1e-29  Score=246.09  Aligned_cols=283  Identities=13%  Similarity=0.140  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ  129 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~  129 (424)
                      ++++++++++++||.+++..|...+. ++|..+.++|+.++.++++++..   ++..    +++.++....+.++...++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~----~~~~~~~~~~~~l~~~~~~   75 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL----RQFPKRYLLAGGLLFVSYE   75 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc----ccccHHHHHHHhHHHHHHH
Confidence            56778999999999999999999885 99999999999999988887531   1111    1112233444555567788


Q ss_pred             HHHHHHhhc----cCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCC
Q 039506          130 LLFLLGLSY----TNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNE  205 (424)
Q Consensus       130 ~~~~~al~~----~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~  205 (424)
                      .+++.++++    +++..++++.++.|+++.+++++++|||+++++      ++|++++++|++++...+...  +.++.
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~~--~~~~~  147 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNGL--SLAEL  147 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCccc--hhhhh
Confidence            888888764    577888999999999999999999999999999      999999999999987321100  00000


Q ss_pred             CCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 039506          206 DFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVI  285 (424)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~  285 (424)
                      +                         .+.+....|++++++|+++||.|.+..|+..++.+ +....   ...+.+.+.+
T Consensus       148 ~-------------------------~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~  198 (295)
T PRK11689        148 I-------------------------NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWI  198 (295)
T ss_pred             h-------------------------hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHH
Confidence            0                         00012346999999999999999999999877766 34332   2223333333


Q ss_pred             HHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHH
Q 039506          286 TAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGG  365 (424)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~  365 (424)
                      .....+ .+ ....+...|..+++.+ +++.++|.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+
T Consensus       199 ~~~~~~-~~-~~~~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~  275 (295)
T PRK11689        199 KYFLSP-QP-AMVFSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGV  275 (295)
T ss_pred             HHHHhc-Cc-cccCCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence            333322 21 2233566787887777 47899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhheeeeecc
Q 039506          366 CLIIAGLYMVTWVSY  380 (424)
Q Consensus       366 ~lii~g~~l~~~~~~  380 (424)
                      ++|+.|+++....++
T Consensus       276 ~lI~~gv~~~~~~~~  290 (295)
T PRK11689        276 AMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHhHHHHhhhHh
Confidence            999999988765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=4.3e-29  Score=241.82  Aligned_cols=276  Identities=19%  Similarity=0.149  Sum_probs=223.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFG  127 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~  127 (424)
                      +.+++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...+++    +.++++++..+..|.+ ...
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~~----~~~~~~~~~~~~~g~~-~~~   83 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWRL----RFAKEQRLPLLFYGVS-LGG   83 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHhc----cCCHHHHHHHHHHHHH-HHH
Confidence            4688999999999999999999999986 999999999999999888876532221    2356777778888887 678


Q ss_pred             HHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCC
Q 039506          128 NQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDF  207 (424)
Q Consensus       128 ~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~  207 (424)
                      .+.++++|++++|++.++++.++.|+++.+++.    ||+.  +      ..++.++++|++++.. .+..   .     
T Consensus        84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~~---~-----  142 (293)
T PRK10532         84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQD---V-----  142 (293)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCCC---c-----
Confidence            888999999999999999999999999998763    5543  3      5557788999988762 1110   0     


Q ss_pred             ccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 039506          208 VGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITA  287 (424)
Q Consensus       208 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~  287 (424)
                                               + +....|++++++++++|+.|.+..|+..++.+ +... .+....+++++.+..
T Consensus       143 -------------------------~-~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~  194 (293)
T PRK10532        143 -------------------------S-HVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIG  194 (293)
T ss_pred             -------------------------c-cCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHH
Confidence                                     0 12347999999999999999999999987766 4444 455566666666665


Q ss_pred             HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHH
Q 039506          288 FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCL  367 (424)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~l  367 (424)
                      ...+.   ....+...|..++++|++++.++|.+|++++++.++++++++.+++|+++.+++++++||+++..+++|+++
T Consensus       195 ~~~~~---~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~l  271 (293)
T PRK10532        195 ALQAG---EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGA  271 (293)
T ss_pred             HHccC---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence            54432   112245566677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhheeeeeccc
Q 039506          368 IIAGLYMVTWVSYR  381 (424)
Q Consensus       368 ii~g~~l~~~~~~~  381 (424)
                      |++|++...+..++
T Consensus       272 Il~~~~~~~~~~~~  285 (293)
T PRK10532        272 IIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999998766544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=6.1e-29  Score=236.34  Aligned_cols=259  Identities=24%  Similarity=0.344  Sum_probs=220.6

Q ss_pred             HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 039506           62 YGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNP  141 (424)
Q Consensus        62 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~  141 (424)
                      ||.+++..|...+.+.|+....+.|+..+.+++.++...+       .+++++++.+..|.++..+++.+++.|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999887668999999999999988887764432       245566778888888889999999999999999


Q ss_pred             chhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCC
Q 039506          142 TYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEP  221 (424)
Q Consensus       142 ~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  221 (424)
                      ++++++.++.|+++.+++++++|||+++++      ++|+.++++|++++.. +++.                       
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~~~-----------------------  123 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DGNL-----------------------  123 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CCcc-----------------------
Confidence            999999999999999999999999999999      9999999999999862 1100                       


Q ss_pred             cccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 039506          222 VGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPS-SLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLT  300 (424)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  300 (424)
                                   +....|++++++++++|+.+.+..|+..++.+. +.....+.+..+.+.+.+..+..++..   ..+
T Consensus       124 -------------~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~  187 (260)
T TIGR00950       124 -------------SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QAL  187 (260)
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---Ccc
Confidence                         133579999999999999999999998877662 234444677888877777766554221   225


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhh
Q 039506          301 QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLY  373 (424)
Q Consensus       301 ~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~  373 (424)
                      ...|..+++.+++++.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       188 SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            6778889999999999999999999999999999999999999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=9e-29  Score=239.88  Aligned_cols=281  Identities=14%  Similarity=0.115  Sum_probs=209.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc---CcCCHHHHHHHHHHHHH
Q 039506           47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR---LPMTRRLLMSFFFLGLT  123 (424)
Q Consensus        47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l  123 (424)
                      ++.+|++++++++++||.++++.|.. + +++|.++.++|+.++.++++++...++++..   ...+++++. ....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHH
Confidence            45689999999999999999999986 4 4999999999999999888877655432111   011344433 3346666


Q ss_pred             HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506          124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG  203 (424)
Q Consensus       124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~  203 (424)
                      +...++.++++|++++++++++++.++.|+++.+++++++|||+++++      +.|++++++|++++...++       
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~-------  148 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG-------  148 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence            688899999999999999999999999999999999999999999999      9999999999999873111       


Q ss_pred             CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHH
Q 039506          204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVL  282 (424)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~  282 (424)
                                                      +.   .+++++++++||.|.+..|+..++.. .......+....+.+.
T Consensus       149 --------------------------------~~---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~  193 (296)
T PRK15430        149 --------------------------------SL---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY  193 (296)
T ss_pred             --------------------------------Cc---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Confidence                                            10   14578899999999999988754321 1122223333333322


Q ss_pred             HHHHHHHhcCCCcccccchh-HHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhh
Q 039506          283 MVITAFFLTNDSTEWSLTQS-ELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGS  361 (424)
Q Consensus       283 l~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~  361 (424)
                      ..+.   .......+..+.. .+..++..++ .+.+++.++++++++.++++++++.+++|+++.+++++++||++++.+
T Consensus       194 ~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~  269 (296)
T PRK15430        194 LFAI---ADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK  269 (296)
T ss_pred             HHHH---ccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            2111   1111111111122 2333334444 678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhheeeeecccc
Q 039506          362 VLGGCLIIAGLYMVTWVSYRE  382 (424)
Q Consensus       362 ~lG~~lii~g~~l~~~~~~~~  382 (424)
                      ++|+++|++|+.+........
T Consensus       270 ~~G~~lI~~~~~v~~~~~~~~  290 (296)
T PRK15430        270 MVTFAFIWVALAIFVMDAIYT  290 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999998888776554333

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=3.2e-27  Score=229.79  Aligned_cols=279  Identities=14%  Similarity=0.090  Sum_probs=216.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 039506           55 MALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLL  134 (424)
Q Consensus        55 ~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~  134 (424)
                      .++..++-....+..|.+.+.-..|..+++.|+.++.+...+... .+.+.+.+.++++++.++..|++ ..+++.+.+.
T Consensus         7 ~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~   84 (302)
T TIGR00817         7 FGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIV-HTIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            344444445556788998875356999999999998777665521 12222335678899999999999 5888999999


Q ss_pred             HhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccc
Q 039506          135 GLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVR  214 (424)
Q Consensus       135 al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~  214 (424)
                      |+++++++.++++.++.|+++++++++++|||+++++      +.|++++++|+++...  ++.                
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~~~----------------  140 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--TEL----------------  140 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--Ccc----------------
Confidence            9999999999999999999999999999999999999      9999999999987641  100                


Q ss_pred             cCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCcchhHHHHHHHHHHHHHHHHHHhcC
Q 039506          215 VRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--KYPSSLSVTAYSYFFGAVLMVITAFFLTN  292 (424)
Q Consensus       215 ~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  292 (424)
                                          +....|++++++|+++|++|.+..|+..+  +.+ +...+.++...+++.+.|.....+.
T Consensus       141 --------------------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~  199 (302)
T TIGR00817       141 --------------------SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEG  199 (302)
T ss_pred             --------------------cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcc
Confidence                                12346999999999999999999999887  666 5889999999999988888776553


Q ss_pred             CCcc---cc-----cc-hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506          293 DSTE---WS-----LT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL  363 (424)
Q Consensus       293 ~~~~---~~-----~~-~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l  363 (424)
                      .+..   +.     .+ ...+...+..+..+....+.++++++++.++++.++..+++|+++++++++++||+++..+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~  279 (302)
T TIGR00817       200 PPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVF  279 (302)
T ss_pred             hHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHH
Confidence            2111   00     00 011221222332233333356678999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhheeeeecc
Q 039506          364 GGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       364 G~~lii~g~~l~~~~~~  380 (424)
                      |++++++|++++.+.+.
T Consensus       280 G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       280 GTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999886443

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=2e-25  Score=216.32  Aligned_cols=305  Identities=18%  Similarity=0.213  Sum_probs=244.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccc-ccCcCCHHHHHHHHHHHH
Q 039506           45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKR-TRLPMTRRLLMSFFFLGL  122 (424)
Q Consensus        45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~l~~g~  122 (424)
                      +++.++.+++.-+.+++-+...+.+..+.+.|.+ |....++.+..-.++..++...++++ ......+++|+++++.++
T Consensus         8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~   87 (334)
T PF06027_consen    8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLAL   87 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHH
Confidence            3456778888888888888889999888876676 77888888888888877776665443 222334567788888898


Q ss_pred             HHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCC
Q 039506          123 TGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGC  202 (424)
Q Consensus       123 lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~  202 (424)
                      + -..++.+.+.|++|++.+.++++..+..+++++++++++|+|.++.+      ++|+++++.|++++...|.....+.
T Consensus        88 ~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~~~  160 (334)
T PF06027_consen   88 L-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGSDS  160 (334)
T ss_pred             H-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccccC
Confidence            8 79999999999999999999999999999999999999999999999      9999999999999986554321110


Q ss_pred             CCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHH
Q 039506          203 GNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL  282 (424)
Q Consensus       203 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~  282 (424)
                      +                             +.++...|++++++|+++||++++..++..++.+ .....++..+++.++
T Consensus       161 ~-----------------------------~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii  210 (334)
T PF06027_consen  161 S-----------------------------SGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFII  210 (334)
T ss_pred             C-----------------------------CCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHH
Confidence            0                             1135679999999999999999999999999887 577888888888888


Q ss_pred             HHHHHHHhcCCC-cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhh
Q 039506          283 MVITAFFLTNDS-TEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGS  361 (424)
Q Consensus       283 l~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~  361 (424)
                      ..+.....+... ...+.+...+..++. ..++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..
T Consensus       211 ~~iq~~ile~~~i~~~~w~~~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly  289 (334)
T PF06027_consen  211 SGIQLAILERSGIESIHWTSQVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY  289 (334)
T ss_pred             HHHHHHheehhhhhccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH
Confidence            888777665432 122223444443333 344667778888889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhheeeeecccccCCCC
Q 039506          362 VLGGCLIIAGLYMVTWVSYRERQAPP  387 (424)
Q Consensus       362 ~lG~~lii~g~~l~~~~~~~~~~~~~  387 (424)
                      ++|.++|++|.+++...+.+.+++.+
T Consensus       290 ~~af~lIiiG~vvy~~~~~~~~~~~~  315 (334)
T PF06027_consen  290 ILAFALIIIGFVVYNLAESPEEEARR  315 (334)
T ss_pred             HHHHHHHHHHhheEEccCCcccccch
Confidence            99999999999999987665544433

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.95  E-value=9.2e-26  Score=217.28  Aligned_cols=274  Identities=14%  Similarity=0.153  Sum_probs=204.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-cccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           52 HGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK-RTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      +.+.++++++|+...+.+|...++ -++  ..++++....+++.++...+.. +.+++.+++. +..+..+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATF-WLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhh-HHHHHHHHHHHHHHHH
Confidence            567889999999999999976654 334  3477777777778777665422 2222323444 4455555555789999


Q ss_pred             HHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506          131 LFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE  210 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~  210 (424)
                      +++.|+++.+++.++++.++.|+++.+++++++|||+++++      ++|+.+++.|+.++... +..            
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~-~~~------------  139 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLS-RFA------------  139 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcc-ccc------------
Confidence            99999999999999999999999999999999999999999      99999999999988631 100            


Q ss_pred             cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchh---HHHHHHHHHHHHHHHH
Q 039506          211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSV---TAYSYFFGAVLMVITA  287 (424)
Q Consensus       211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~---~~~~~~~~~~~l~~~~  287 (424)
                                              .....|+.++++++++|++|.+..|+..++.++....   ..+......+.+.+..
T Consensus       140 ------------------------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (281)
T TIGR03340       140 ------------------------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY  195 (281)
T ss_pred             ------------------------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH
Confidence                                    0113577889999999999999988875554421111   1222222211112211


Q ss_pred             HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHH
Q 039506          288 FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCL  367 (424)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~l  367 (424)
                      ...+..  ....+...+..+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++
T Consensus       196 ~~~~~~--~~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~l  273 (281)
T TIGR03340       196 LKRHGR--SMFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCI  273 (281)
T ss_pred             HHHhcc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence            111211  111233456677888888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhe
Q 039506          368 IIAGLYM  374 (424)
Q Consensus       368 ii~g~~l  374 (424)
                      +++|+++
T Consensus       274 il~Gv~l  280 (281)
T TIGR03340       274 IVAGLVV  280 (281)
T ss_pred             HHHhHHh
Confidence            9999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=4.8e-25  Score=218.25  Aligned_cols=283  Identities=16%  Similarity=0.168  Sum_probs=221.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcC--CHHHHHHHHHHHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPM--TRRLLMSFFFLGLTG  124 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~l~~g~lg  124 (424)
                      +.+...+.+....+-.......|.+.+. ++ |..++++|++++.++..++.....++ +++.  .+++++..+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRK-IPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHH
Confidence            4566667777777777888899999986 99 99999999999987765554332221 2222  355788899999996


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN  204 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~  204 (424)
                      ... +...+.|+++++++.++++..+.|+++++++++++|||+++++      +.+++++++|+++...  ++       
T Consensus       125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~~-------  188 (350)
T PTZ00343        125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--KE-------  188 (350)
T ss_pred             HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--cc-------
Confidence            554 5557799999999999999999999999999999999999999      9999999999999872  11       


Q ss_pred             CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC------CcchhHHHHHHH
Q 039506          205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP------SSLSVTAYSYFF  278 (424)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~  278 (424)
                                                   .+....|++++++|+++|+++.+..|+..++.+      ++.....+....
T Consensus       189 -----------------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
T PTZ00343        189 -----------------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLI  239 (350)
T ss_pred             -----------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHH
Confidence                                         013357999999999999999999999887543      133455556788


Q ss_pred             HHHHHHHHHHHhcCCC--ccc-----ccchhHHHHHHHHHHHHHHHHHHHHHH----HhhccChhhHhhhcchhHHHHHH
Q 039506          279 GAVLMVITAFFLTNDS--TEW-----SLTQSELFAVIYAGIIASAVNYGLITW----SNKILGPALVALYNPLQPAASAF  347 (424)
Q Consensus       279 ~~~~l~~~~~~~~~~~--~~~-----~~~~~~~~~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pi~~~l  347 (424)
                      +.++++|+....+...  ..+     ..+...+..+++ .++.+.+.+.+++.    +++++++.+.++..+++|+++++
T Consensus       240 ~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv  318 (350)
T PTZ00343        240 ASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIV  318 (350)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhh
Confidence            8888888877554211  111     001112233334 34557888888885    99999999999999999999999


Q ss_pred             HHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          348 LSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       348 ~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      ++++++||++++.+++|++++++|++++++.
T Consensus       319 ~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        319 SSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999988754

>TIGR00688 rarD rarD protein

Probab=99.93  E-value=5.8e-24  Score=201.98  Aligned_cols=248  Identities=12%  Similarity=0.108  Sum_probs=184.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccc-----cCcCCHH-HHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRT-----RLPMTRR-LLMSFFFLGLT  123 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~-~~~~~l~~g~l  123 (424)
                      +|+.++++++++||.+.++.|.+ . +++|.+++++|++++.+++.++...++++.     .+..+++ ++......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            47889999999999999999984 4 499999999999999988877664433211     1111222 23445666766


Q ss_pred             HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506          124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG  203 (424)
Q Consensus       124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~  203 (424)
                       ..+++.+++.|++++++++++++.++.|+++++++++++|||+++++      +++++++++|++++...++       
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence             78999999999999999999999999999999999999999999999      9999999999998862110       


Q ss_pred             CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHH
Q 039506          204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM  283 (424)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l  283 (424)
                                                      +..   +++++++++|+.|.+..|+..++ +. ...... .....+..
T Consensus       146 --------------------------------~~~---~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~  187 (256)
T TIGR00688       146 --------------------------------SLP---WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVA  187 (256)
T ss_pred             --------------------------------Cch---HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHH
Confidence                                            111   35788999999999999997543 31 222221 12222222


Q ss_pred             HHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH
Q 039506          284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIF  352 (424)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~  352 (424)
                      .+.....+........+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++.++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       188 IYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            222111111111111123478888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.92  E-value=2e-22  Score=193.66  Aligned_cols=282  Identities=26%  Similarity=0.437  Sum_probs=219.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506           47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF  126 (424)
Q Consensus        47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~  126 (424)
                      +...+..+.++..+.|+......|...+...++....+.|...+.++..+....++...+ + ..+.++...+.+.++..
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~   81 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-P-ALRPWLLLLLLALLGLA   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc-c-cccchHHHHHHHHHHHH
Confidence            445677888888899999999999988754677777777999988884433332211111 1 12224456666777789


Q ss_pred             HHHHHHHHHhhccCcchhhhcccchHHHHHHHHH-HHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCC
Q 039506          127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV-MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNE  205 (424)
Q Consensus       127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~-l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~  205 (424)
                      .++.+++.++++++++.++++.++.|+++.++++ +++|||+++.+      +.++++.+.|++++...+...       
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~-------  148 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGG-------  148 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcc-------
Confidence            9999999999999999999999999999999997 77799999999      999999999999998321110       


Q ss_pred             CCccccccccCCCCCCcccccccccccCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHH-HHHHHHHHHH
Q 039506          206 DFVGENEVRVRGQPEPVGWLLSNFIDIGLDQ-WHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTA-YSYFFGAVLM  283 (424)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~~~l  283 (424)
                                                   .. ...|++++++++++++++.+..|+.. +.+ +..... +...  ....
T Consensus       149 -----------------------------~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~  195 (292)
T COG0697         149 -----------------------------GILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALL  195 (292)
T ss_pred             -----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHH
Confidence                                         01 46899999999999999999999987 444 344444 3333  1122


Q ss_pred             HHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506          284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL  363 (424)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l  363 (424)
                      .......... . .+.+...+..+.+.|++++.+++.++++++++.++...+.+.+++|+++.+++++++||+++..+++
T Consensus       196 ~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~  273 (292)
T COG0697         196 LLLLFFLSGF-G-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLL  273 (292)
T ss_pred             HHHHHHhccc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence            2222211111 1 3335678899999999988899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhheeeee
Q 039506          364 GGCLIIAGLYMVTWV  378 (424)
Q Consensus       364 G~~lii~g~~l~~~~  378 (424)
                      |+.++++|+++...+
T Consensus       274 G~~li~~g~~l~~~~  288 (292)
T COG0697         274 GAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999988765

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.91  E-value=1e-25  Score=204.02  Aligned_cols=294  Identities=20%  Similarity=0.236  Sum_probs=233.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506           47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF  126 (424)
Q Consensus        47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~  126 (424)
                      +..++..+..++.++-..+.+..|.+ +  .+|.+..-.|++..+++..|..+.+++....+...|  +++++.|.+| .
T Consensus        35 ~p~~gl~l~~vs~ff~~~~vv~t~~~-e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R--~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYFFNSCMVVSTKVL-E--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR--KWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhHHHHhhHHHhhhhhh-c--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE--EEEEeehhhh-h
Confidence            44567777777766666666666655 3  689999999988888887776666555432222222  4577888887 4


Q ss_pred             HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCC
Q 039506          127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNED  206 (424)
Q Consensus       127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~  206 (424)
                      .+..+.|+|++|.+.+++++|.++.|+++++++|+++|||.++.+      ..+..+.+.|+++++  +++.+++...+.
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv--RPpFlFG~~t~g  180 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV--RPPFLFGDTTEG  180 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe--cCCcccCCCccc
Confidence            455566789999999999999999999999999999999999999      999999999999997  677766654332


Q ss_pred             CccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHH
Q 039506          207 FVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT  286 (424)
Q Consensus       207 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~  286 (424)
                      .++         +             ..+..++|...++.++++.|...++.|+..|+.+. ...+.|..+++.+..++.
T Consensus       181 ~~~---------s-------------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~  237 (346)
T KOG4510|consen  181 EDS---------S-------------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIG  237 (346)
T ss_pred             ccc---------c-------------cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHH
Confidence            110         0             11245677889999999999999999999999984 677777777777776665


Q ss_pred             HHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHH
Q 039506          287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGC  366 (424)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~  366 (424)
                      ....+  ...++..+++|+..+.+|++ +++++.+.+.++++..+..++++.++..+++.++++++||+.||++.|.|++
T Consensus       238 ~~~ig--~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~  314 (346)
T KOG4510|consen  238 CASIG--AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAV  314 (346)
T ss_pred             Hhhcc--ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhcee
Confidence            55443  23455578899999999986 7889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhheeeeecc
Q 039506          367 LIIAGLYMVTWVSY  380 (424)
Q Consensus       367 lii~g~~l~~~~~~  380 (424)
                      +++.+.+.....+.
T Consensus       315 ~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  315 MVVSSTVWVALKKW  328 (346)
T ss_pred             eeehhHHHHHHHHH
Confidence            99999887765443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.90  E-value=1.5e-21  Score=180.83  Aligned_cols=279  Identities=14%  Similarity=0.161  Sum_probs=227.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc---CcCCHHHHHHHHHHHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR---LPMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~l~~g~lg  124 (424)
                      ..+|+++.+.+.++||..+...|.+..  +++.++...|.+.+..+++.+....+++..   ...+++.+....+.+++ 
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence            447999999999999999999999854  899999999999999988887766555321   12356677777888888 


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN  204 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~  204 (424)
                      ...++..|.+|.++..+-++++-++..|++.++++++|+|||+++.|      +++++++.+||....+..|+.      
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~l------  149 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGSL------  149 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCCC------
Confidence            89999999999999999999999999999999999999999999999      999999999999998643321      


Q ss_pred             CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 039506          205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV  284 (424)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~  284 (424)
                                                     .     ..++.=+++|+.|....|+.  +.+ +.+-...-++.-.+..+
T Consensus       150 -------------------------------p-----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al  190 (293)
T COG2962         150 -------------------------------P-----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVAL  190 (293)
T ss_pred             -------------------------------c-----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHH
Confidence                                           1     23456689999999876665  444 35555666666666655


Q ss_pred             HHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506          285 ITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL  363 (424)
Q Consensus       285 ~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l  363 (424)
                      ...+..+...+... .+...+..++..|. .++++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++
T Consensus       191 ~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~  269 (293)
T COG2962         191 IYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLV  269 (293)
T ss_pred             HHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence            55555553332122 24566677777777 58999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhheeeeeccc
Q 039506          364 GGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       364 G~~lii~g~~l~~~~~~~  381 (424)
                      ..+.|.+|.+++....-+
T Consensus       270 ~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         270 TFAFIWLALALFSIDGLY  287 (293)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999998866543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.89  E-value=8.4e-21  Score=171.25  Aligned_cols=275  Identities=20%  Similarity=0.176  Sum_probs=226.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      .+.+++.+...--....+.|.++.. +++...+.+|..++.++++++..-++    .+..++++...+..|+. ....+.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvs-Lg~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVS-LGGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHH-HHHHHH
Confidence            5667777777777777889999986 99999999999999999988754333    24568888899999998 899999


Q ss_pred             HHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506          131 LFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE  210 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~  210 (424)
                      +||.+++.+|.+.+..+-++-|+.+++++.    +|  .++      .+.+.+++.|+.++.. .++.     .      
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p-~~~~-----~------  142 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLP-LGQS-----V------  142 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhhee-ccCC-----c------
Confidence            999999999999999999999999987654    33  223      7778889999998872 1110     0      


Q ss_pred             cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 039506          211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL  290 (424)
Q Consensus       211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  290 (424)
                             .                +....|..+++.++.||++|++..||..+..+. -.-+...+.++.++.+|+....
T Consensus       143 -------~----------------~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~  198 (292)
T COG5006         143 -------W----------------SLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQ  198 (292)
T ss_pred             -------C----------------cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-chHHHHHHHHHHHHHhhhhhhh
Confidence                   0                145689999999999999999999999876563 5778888888998888887754


Q ss_pred             cCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHH
Q 039506          291 TNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIA  370 (424)
Q Consensus       291 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~  370 (424)
                      .. +.  -+++......+..+++++.+.|.+-..++++.+....+.+.++||.++.+.+++++||++|..||+|+.+|+.
T Consensus       199 ag-~~--l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~Via  275 (292)
T COG5006         199 AG-PA--LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIA  275 (292)
T ss_pred             cc-hh--hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            31 11  1246667777889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheeeeecccc
Q 039506          371 GLYMVTWVSYRE  382 (424)
Q Consensus       371 g~~l~~~~~~~~  382 (424)
                      +..-.++..+|+
T Consensus       276 AsaG~~lt~~~~  287 (292)
T COG5006         276 ASAGSTLTARKP  287 (292)
T ss_pred             HHhccccccCCC
Confidence            998776654443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.84  E-value=5.1e-19  Score=170.87  Aligned_cols=278  Identities=14%  Similarity=0.106  Sum_probs=205.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      ++++.++++++||...+..|...  +.++.++.  |..++.+++..+....+++.  ...++.+...++.|.+ ...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence            46788999999999999999875  57787764  77777777766555543211  2235555556666666 888999


Q ss_pred             HHHHHhhccCcchhhhccc-chHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506          131 LFLLGLSYTNPTYAAAIQP-SIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG  209 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~~-l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~  209 (424)
                      +++.|.++++.+.+..+.. +.+++..+.+.+++|||.++++  ...-++|++++++|++++...+++..   + +    
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~---~-~----  144 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA---G-I----  144 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc---c-c----
Confidence            9999999999999999987 9999999999999999987653  11127889999999888863221100   0 0    


Q ss_pred             ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHH---HHHHHHHHH
Q 039506          210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYF---FGAVLMVIT  286 (424)
Q Consensus       210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~---~~~~~l~~~  286 (424)
                              ++              ..+...|.+++++|+++|+.|.+..|..  +.+ |....+.+..   .+..+..+.
T Consensus       145 --------~~--------------~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~  199 (290)
T TIGR00776       145 --------KS--------------EFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLG  199 (290)
T ss_pred             --------cc--------------ccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHH
Confidence                    00              0133579999999999999999999986  355 5677444443   333322222


Q ss_pred             HHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhh-ccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH---
Q 039506          287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNK-ILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV---  362 (424)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~---  362 (424)
                      .  .  ...++. +...+.. +..|++ ..+++.+|..+.+ +.++++++.+.+.+|+.+.+++++++||+.++.++   
T Consensus       200 ~--~--~~~~~~-~~~~~~~-~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~  272 (290)
T TIGR00776       200 H--I--LAKPLK-KYAILLN-ILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAI  272 (290)
T ss_pred             H--h--cccchH-HHHHHHH-HHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehh
Confidence            1  1  111221 2333444 447887 7999999999999 99999999999999999999999999999999999   


Q ss_pred             -HHHHHHHHhhheeee
Q 039506          363 -LGGCLIIAGLYMVTW  377 (424)
Q Consensus       363 -lG~~lii~g~~l~~~  377 (424)
                       +|+++++.|+++...
T Consensus       273 ~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       273 SVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence             999999999987643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.82  E-value=9.8e-18  Score=163.16  Aligned_cols=265  Identities=16%  Similarity=0.199  Sum_probs=211.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHH
Q 039506           79 QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLL  158 (424)
Q Consensus        79 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~ll  158 (424)
                      |..+++.++....++..+.....+++   ..++..++.++..+++ ..++..+-+.|++|+|.+...++..+.|+.++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            88999999999988887766655421   2234445667777888 7899999999999999999999999999999999


Q ss_pred             HHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhH
Q 039506          159 AVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWH  238 (424)
Q Consensus       159 a~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  238 (424)
                      +.+++|+|.+.++      +.++++..+|+.+....+.....+..+                            ....+.
T Consensus       108 ~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~~~~----------------------------~~~~~~  153 (303)
T PF08449_consen  108 GVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSSSNS----------------------------SSFSSA  153 (303)
T ss_pred             HHHhcCccccHHH------HHHHHHHHhhHheeeeccccccccccc----------------------------ccccch
Confidence            9999999999999      999999999999998644432111110                            001334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHH--hcCCCccccc---chhHHHHHHHHHH
Q 039506          239 LGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFF--LTNDSTEWSL---TQSELFAVIYAGI  312 (424)
Q Consensus       239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~---~~~~~~~l~~~g~  312 (424)
                      .|+++.+++.++.+...+..++..++++ ++...+++....+.+...+....  .++....++.   .+..+..++... 
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-  232 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-  232 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-
Confidence            5999999999999999999999988766 45788999999999888877776  3322222221   233444444444 


Q ss_pred             HHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccc
Q 039506          313 IASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRE  382 (424)
Q Consensus       313 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~  382 (424)
                      +++.+++.+.+..+++.++...+++..+..+++++++++++|+++++.+|+|.++++.|..+..+.++|+
T Consensus       233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            4677788888899999999999999999999999999999999999999999999999999988766554

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.75  E-value=7.4e-17  Score=153.46  Aligned_cols=298  Identities=15%  Similarity=0.189  Sum_probs=225.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHH----Hh---hcc--ccc--------
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALNVGV--NQLVFCVFRDLLALSILAPIA----YF---REK--RTR--------  106 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~----~~---~~~--~~~--------  106 (424)
                      .+...|+.+.++...+|-.+.-+++...+.+-  .|+.+++.....-.+.+.++.    .+   .+|  +..        
T Consensus        10 ~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d   89 (416)
T KOG2765|consen   10 WRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEAD   89 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhh
Confidence            45678999999999999999999999886433  488777666555444444422    11   111  000        


Q ss_pred             --------------------------------------------------CcCCH------------HHHHHHHHHHHHH
Q 039506          107 --------------------------------------------------LPMTR------------RLLMSFFFLGLTG  124 (424)
Q Consensus       107 --------------------------------------------------~~~~~------------~~~~~~l~~g~lg  124 (424)
                                                                        ....+            +..+..+..+.+ 
T Consensus        90 ~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l-  168 (416)
T KOG2765|consen   90 AEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL-  168 (416)
T ss_pred             hhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH-
Confidence                                                              00011            233445666777 


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN  204 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~  204 (424)
                      .+++++.++.|+.+++++..+++..+.-+|+..++.++..||++..+      .+++++++.|+++++.++.....+   
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~~---  239 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNSD---  239 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEecccccccc---
Confidence            78899999999999999999999999999999999999999999999      999999999999998644432100   


Q ss_pred             CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcch---hHHHHHHHHHH
Q 039506          205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLS---VTAYSYFFGAV  281 (424)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~---~~~~~~~~~~~  281 (424)
                                   .              ...+...|+++++++++.||.|.+..|+...+.+..+.   ..++..++..+
T Consensus       240 -------------~--------------~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnll  292 (416)
T KOG2765|consen  240 -------------L--------------PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLL  292 (416)
T ss_pred             -------------C--------------CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH
Confidence                         1              11366899999999999999999999998777631222   34444455556


Q ss_pred             HHHHHHHHhcC-CCccccc-chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506          282 LMVITAFFLTN-DSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL  359 (424)
Q Consensus       282 ~l~~~~~~~~~-~~~~~~~-~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~  359 (424)
                      ++.|..++.+. ....++. +......++..++++++++=.+|.+|.-..++..+.+-..++.+.+++.+.++-+..+++
T Consensus       293 llwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  293 LLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA  372 (416)
T ss_pred             HHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence            66655554321 1122232 345566677788889999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhheeeeecc
Q 039506          360 GSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       360 ~~~lG~~lii~g~~l~~~~~~  380 (424)
                      .+++|.+.|++|.+.+++...
T Consensus       373 ~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  373 LYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHhheecccc
Confidence            999999999999999987544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.70  E-value=7.2e-17  Score=154.88  Aligned_cols=284  Identities=14%  Similarity=0.184  Sum_probs=221.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506           52 HGAMALVQLFYGGYHVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ  129 (424)
Q Consensus        52 ~~~~l~a~~~~~~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~  129 (424)
                      ..+......+-.......|...+. +.+ |..++.++...+.+.++.....+..+..+...+..+...+..|++ ..++.
T Consensus        19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~   97 (316)
T KOG1441|consen   19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISH   97 (316)
T ss_pred             HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHH
Confidence            333444444444556667777762 233 778888888888777777665554433333355678888999999 89999


Q ss_pred             HHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506          130 LLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG  209 (424)
Q Consensus       130 ~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~  209 (424)
                      ++-+.++++.+++.++.+..++|.++.++++++.+|+.+...      +..+...+.|+.+.+..+.             
T Consensus        98 v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e~-------------  158 (316)
T KOG1441|consen   98 VLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTEL-------------  158 (316)
T ss_pred             HhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeeccc-------------
Confidence            999999999999999999999999999999999999999999      9999999999999984211             


Q ss_pred             ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--cCC-CcchhHHHHHHHHHHHHH-H
Q 039506          210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--KYP-SSLSVTAYSYFFGAVLMV-I  285 (424)
Q Consensus       210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~~~l~-~  285 (424)
                                               +....|.+.++.+.++.+...+..|+..+  +.+ +++....++...+...++ |
T Consensus       159 -------------------------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P  213 (316)
T KOG1441|consen  159 -------------------------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIP  213 (316)
T ss_pred             -------------------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcc
Confidence                                     14468999999999999999999999985  222 468899999999998888 6


Q ss_pred             HHHHhcCCCc------ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506          286 TAFFLTNDST------EWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL  359 (424)
Q Consensus       286 ~~~~~~~~~~------~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~  359 (424)
                      .....++...      .|.  .. ...+++.. ++...-....+..+.+++|.+.++.+.+.-++.++.++++|+++.|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~  289 (316)
T KOG1441|consen  214 FLDYVEGNKFVGFLTAPWF--VT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF  289 (316)
T ss_pred             hHhhhcccceeeeeccccc--hh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch
Confidence            6665544322      222  22 33333333 34555566688899999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhheeeeecccccC
Q 039506          360 GSVLGGCLIIAGLYMVTWVSYRERQ  384 (424)
Q Consensus       360 ~~~lG~~lii~g~~l~~~~~~~~~~  384 (424)
                      .+.+|+++.++|++++.+.+.++++
T Consensus       290 ~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  290 LNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            9999999999999999887665554

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.60  E-value=5.7e-16  Score=140.07  Aligned_cols=290  Identities=16%  Similarity=0.185  Sum_probs=211.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg  124 (424)
                      ++.++++.+.-.-.++-......+..+.+.+++ |...+|+.+..-+++..+++.+|++-     -+..|..+++.++. 
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~-----~~~~~~hYilla~~-   87 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY-----IKAKWRHYILLAFV-   87 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH-----HHHHHHHhhheeEE-
Confidence            455566555555555544445555555544454 77889999999999999998887531     23334457788887 


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN  204 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~  204 (424)
                      -.-++++...|.||++...+.++-.-....+.+++|+|+|-|.+..+      +.|+++|+.|+++++..|-..    ++
T Consensus        88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a----gd  157 (336)
T KOG2766|consen   88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA----GD  157 (336)
T ss_pred             eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc----cc
Confidence            57777888999999999999999888888889999999999999999      999999999999998644321    11


Q ss_pred             CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 039506          205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV  284 (424)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~  284 (424)
                                   +-             |.++...|+.++++++-+||..++....+.++.| ....+....++++++..
T Consensus       158 -------------~a-------------ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsa  210 (336)
T KOG2766|consen  158 -------------RA-------------GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISA  210 (336)
T ss_pred             -------------cc-------------CCCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHH
Confidence                         11             2346679999999999999999999999999988 58889999999999988


Q ss_pred             HHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHH
Q 039506          285 ITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLG  364 (424)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG  364 (424)
                      +-..+...+......+.+....+  ...++.+.-|.+....+|.-+++...+-..+.-.++++.  -.||-+.++...+.
T Consensus       211 IQ~i~~~~~~~tl~w~~~i~~yl--~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~la  286 (336)
T KOG2766|consen  211 IQFIFERHHVSTLHWDSAIFLYL--RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLA  286 (336)
T ss_pred             HHHhhhccceeeEeehHHHHHHH--HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHH
Confidence            87443321111111122211111  133344555555556678888888877777777777777  56888899999999


Q ss_pred             HHHHHHhhheeeeecccc
Q 039506          365 GCLIIAGLYMVTWVSYRE  382 (424)
Q Consensus       365 ~~lii~g~~l~~~~~~~~  382 (424)
                      .+.+..|.+++..+++.+
T Consensus       287 F~~i~~GliiYs~re~~~  304 (336)
T KOG2766|consen  287 FATIATGLIIYSTREKDE  304 (336)
T ss_pred             HHHHHHhhEEeeccccCc
Confidence            999999999986554433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=4.4e-13  Score=126.30  Aligned_cols=291  Identities=14%  Similarity=0.184  Sum_probs=225.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF  126 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~  126 (424)
                      ...+...+..++.-....+..|..... +.| ......++++.+.+.+...-..+--+ .++.+++..+.++...++ ..
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~-~~~l~~~~~kk~~P~~~l-f~   88 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVN-FRPLDLRTAKKWFPVSLL-FV   88 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceee-cCCcChHHHHHHccHHHH-HH
Confidence            344556666666666778888988753 233 23333588888877666554333222 346688888899999999 88


Q ss_pred             HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCC
Q 039506          127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNED  206 (424)
Q Consensus       127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~  206 (424)
                      ++...-..+++|.++...+++....|+++++....++|.|++..-      +.++...++|.......+-          
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d~----------  152 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTDL----------  152 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccccc----------
Confidence            999999999999999999999999999999999999999999888      9999999999887763211          


Q ss_pred             CccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHH
Q 039506          207 FVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVI  285 (424)
Q Consensus       207 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~  285 (424)
                                                  .....|+.+++...+.-+.+.+..|+..+..+ +.+..++|..+.+.+.+..
T Consensus       153 ----------------------------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~  204 (314)
T KOG1444|consen  153 ----------------------------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLI  204 (314)
T ss_pred             ----------------------------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHH
Confidence                                        12335899999999999999999999877544 3578899999999999888


Q ss_pred             HHHHhcCCCccccc------chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506          286 TAFFLTNDSTEWSL------TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL  359 (424)
Q Consensus       286 ~~~~~~~~~~~~~~------~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~  359 (424)
                      ...++++.. ....      ....+..+...++++.++.|. -.++.+..++...++++..+...+.+...+++|++.++
T Consensus       205 ~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~  282 (314)
T KOG1444|consen  205 LSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTF  282 (314)
T ss_pred             HHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceech
Confidence            888776422 1111      245566777777766565554 88999999999999999888888888887788889999


Q ss_pred             hhHHHHHHHHHhhheeeeecccccCCCC
Q 039506          360 GSVLGGCLIIAGLYMVTWVSYRERQAPP  387 (424)
Q Consensus       360 ~~~lG~~lii~g~~l~~~~~~~~~~~~~  387 (424)
                      ...+|..+-++|.+++++.+.++++.++
T Consensus       283 ~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  283 LNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             hhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            9999999999999999987766555443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=3.3e-14  Score=127.22  Aligned_cols=254  Identities=14%  Similarity=0.150  Sum_probs=196.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHH
Q 039506           81 VFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV  160 (424)
Q Consensus        81 ~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~  160 (424)
                      .++++++....++.-++..++++..   .++..-+.+...++- +.+.++.-+.|++++|-....+-.++-|+=+++++.
T Consensus        55 aLVf~qC~~N~vfAkvl~~ir~~~~---~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV  130 (337)
T KOG1580|consen   55 ALVFFQCTANTVFAKVLFLIRKKTE---IDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV  130 (337)
T ss_pred             HHHHHHHHHHHHHHHhheeeccccc---ccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence            3445555555555544444444321   122222344545544 788999999999999999999999999999999999


Q ss_pred             HHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHH
Q 039506          161 MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLG  240 (424)
Q Consensus       161 l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G  240 (424)
                      ++.|++.++++      ..++++.+.|+.+.++ +.....+.  +                            ......|
T Consensus       131 l~~~KsY~w~k------Y~cVL~IV~GValFmY-K~~Kv~g~--e----------------------------~~t~g~G  173 (337)
T KOG1580|consen  131 LFAHKSYHWRK------YCCVLMIVVGVALFMY-KENKVGGA--E----------------------------DKTFGFG  173 (337)
T ss_pred             hhhcccccHHH------HHHHHHHHHHHHHhhc-cccccCCC--c----------------------------ccccchH
Confidence            99999999999      9999999999999984 43221111  1                            1256789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcccc---cchhHHHHHHHHHHHHHH
Q 039506          241 VLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS---LTQSELFAVIYAGIIASA  316 (424)
Q Consensus       241 ~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~~~~  316 (424)
                      .++.+++-.+-++...+..+..+.+. ..-.+++++.+.+++.+....++.++-+....   ..+..|+-+..+++ ++.
T Consensus       174 ElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~  252 (337)
T KOG1580|consen  174 ELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASC  252 (337)
T ss_pred             HHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHH
Confidence            99999999998888888777766543 23578899999999988887777664221111   14567777788876 789


Q ss_pred             HHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          317 VNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       317 ~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      +++.+.+.-+...+|..-+++..+.-.++++.++++++.+++.+||+|.++++.|...=.
T Consensus       253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            999999999999999999999999999999999999999999999999999999987643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.59  E-value=4.3e-12  Score=121.36  Aligned_cols=299  Identities=13%  Similarity=0.124  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhc----ccccC------cCCHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALNVG---VNQLVFCVFRDLLALSILAPIAYFRE----KRTRL------PMTRRLLMS  116 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~----~~~~~------~~~~~~~~~  116 (424)
                      .-++.+++..+.++......|+....+   ..|....++--++-.++.....+...    ++..+      ...+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            566777888888899999999887544   45666666665555555554444432    11111      124445566


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccC
Q 039506          117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRG  196 (424)
Q Consensus       117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~  196 (424)
                      ..+-+++ +.+.+-+++.++.+.+++...+...+-.+.|+++.++++++|++++|      |.++++...|+.++.....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            6677777 78888899999999999999999999999999999999999999999      9999999999999963222


Q ss_pred             CcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchh-HHHH
Q 039506          197 PALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSV-TAYS  275 (424)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~-~~~~  275 (424)
                      +. .+...            ..|              .++...|....+.++..-+...+...+..|+.+.+..+ ....
T Consensus       168 ~~-~~a~~------------~~~--------------~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL  220 (345)
T KOG2234|consen  168 SP-TGAKS------------ESS--------------AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQL  220 (345)
T ss_pred             CC-CCccC------------CCc--------------ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            11 00000            011              13667999999999999999999999999876644444 3444


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCC
Q 039506          276 YFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGS  355 (424)
Q Consensus       276 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e  355 (424)
                      .+++.+..+...+..+.+...|.--...|-...++-++..+.+=.+...-+|+.+-..=+....+..+++.+.++.++|-
T Consensus       221 ~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~  300 (345)
T KOG2234|consen  221 YFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDF  300 (345)
T ss_pred             HHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            45555555555555543322222111223333333344444454556667788888888888888999999999999999


Q ss_pred             CcchhhHHHHHHHHHhhheeeeecccc
Q 039506          356 PIYLGSVLGGCLIIAGLYMVTWVSYRE  382 (424)
Q Consensus       356 ~~~~~~~lG~~lii~g~~l~~~~~~~~  382 (424)
                      .||....+|..+++.++.++...+.++
T Consensus       301 ~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  301 QLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             CchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            999999999999999999998555544

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.57  E-value=2.6e-14  Score=116.38  Aligned_cols=135  Identities=22%  Similarity=0.245  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc-CcCCHHHHHHHHHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR-LPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ...++.++++++|+...++.|...+ ++||...+++|.....+++..+....++... ...++|.|..+.+.|+. ..++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence            3567899999999999999999998 4999999999999999999988888776432 23578888888888866 6999


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      +.+||.|++...++.+..+..+.|+++++++++++|||++..+      ++|+.+..+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999      999999999998875

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.54  E-value=1.3e-13  Score=112.30  Aligned_cols=135  Identities=16%  Similarity=0.151  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHH
Q 039506          241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYG  320 (424)
Q Consensus       241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  320 (424)
                      .++++++++++++..++.|--.++.| |...+..+.......+.......++....-..+.+.|..++..|+ ++.+++.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGl-a~glswl   82 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGL-AGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHH-HHHHHHH
Confidence            47899999999999999999888888 578888888888888888877776433333356888999888885 7899999


Q ss_pred             HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          321 LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       321 l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +|++|++..+++++.++..++|+++++++++++||++|..+|+|+++|++|.+++..
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999998764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.51  E-value=2.5e-13  Score=120.73  Aligned_cols=279  Identities=14%  Similarity=0.192  Sum_probs=209.8

Q ss_pred             HHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcch
Q 039506           66 HVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTY  143 (424)
Q Consensus        66 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~  143 (424)
                      .+..|...+. |.+ -+.+.+++.+.+.+-+..+-..+--+.|    .++.+.++..+++ .....+.-..+++|+++..
T Consensus        22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~vpi   96 (309)
T COG5070          22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----LTKAKKWFPISFL-LVVMIYTSSKSLQYLAVPI   96 (309)
T ss_pred             HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----hhhhhhhcCHHHH-HHHHHHhcccceeeeeeeH
Confidence            3445555431 222 4566788888887777666544433333    3333445556666 5666677788999999999


Q ss_pred             hhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcc
Q 039506          144 AAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVG  223 (424)
Q Consensus       144 a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  223 (424)
                      .+++.++..+.++.....+++.|++..+      ..+.++.++..+...+.|.+...                       
T Consensus        97 YTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~-----------------------  147 (309)
T COG5070          97 YTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA-----------------------  147 (309)
T ss_pred             HHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH-----------------------
Confidence            9999999999999999999999999999      99999988888887754432211                       


Q ss_pred             cccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcc-cc--c
Q 039506          224 WLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTE-WS--L  299 (424)
Q Consensus       224 ~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~--~  299 (424)
                              +..+..+.|++++...++.-+.+...+|+..+-.+ .....++|..+++.++++.+.+..++..+. ..  .
T Consensus       148 --------~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl  219 (309)
T COG5070         148 --------FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL  219 (309)
T ss_pred             --------HHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC
Confidence                    01125678999999999999999999998766433 347889999999999999999988742211 11  1


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          300 TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       300 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      +.....++...|+.+.++ -.+-.|+++..+.+..++++.++-....+.|.+++||+.+...+..+.+-.++.+++...+
T Consensus       220 ~~d~l~am~ISgl~svgi-Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak  298 (309)
T COG5070         220 SVDSLMAMFISGLCSVGI-SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK  298 (309)
T ss_pred             ChHHHHHHHHHHHHHhhh-hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            334455677777644444 4458999999999999999999999999999999999999999999999999888888776


Q ss_pred             ccccCCCC
Q 039506          380 YRERQAPP  387 (424)
Q Consensus       380 ~~~~~~~~  387 (424)
                      .+++++++
T Consensus       299 s~k~q~q~  306 (309)
T COG5070         299 SKKQQNQK  306 (309)
T ss_pred             HHHHhcCC
Confidence            66555443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.50  E-value=2.9e-12  Score=120.27  Aligned_cols=231  Identities=18%  Similarity=0.198  Sum_probs=168.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506          110 TRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI  189 (424)
Q Consensus       110 ~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~  189 (424)
                      .+++..++.+-+++ +...+.+.+.++++++++...++..+..+++++++++++|+|++++|      |.++.+..+|++
T Consensus        13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            57777888888988 89999999999999999999999999999999999999999999999      999999999999


Q ss_pred             hhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Q 039506          190 LMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSL  269 (424)
Q Consensus       190 li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~  269 (424)
                      ++.........+..+.      ..+ +..              .......|.++.++++++-++..+..+|..|+.+.++
T Consensus        86 lv~~~~~~~~~~~~~~------~~~-~~~--------------~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~  144 (244)
T PF04142_consen   86 LVQLSSSQSSDNSSSS------SVH-HDA--------------SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSL  144 (244)
T ss_pred             eeecCCcccccccccc------ccc-ccc--------------ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence            9864222210000000      000 000              1125679999999999999999999999999876333


Q ss_pred             h-hHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHH
Q 039506          270 S-VTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFL  348 (424)
Q Consensus       270 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~  348 (424)
                      . ......+.+.++.++.....+.+...-.--...|-...+.-++...++=.+....+|+.+...=+.......+++.++
T Consensus       145 ~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~  224 (244)
T PF04142_consen  145 WIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVL  224 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            3 344445555655555544433211110000112222233333445555556777889999999999999999999999


Q ss_pred             HHHHcCCCcchhhHHHHHHH
Q 039506          349 SKIFLGSPIYLGSVLGGCLI  368 (424)
Q Consensus       349 ~~l~~~e~~~~~~~lG~~li  368 (424)
                      +++++|.+++....+|..++
T Consensus       225 s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  225 SVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHHhCCCCchHHhhheecC
Confidence            99999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=3.6e-13  Score=112.67  Aligned_cols=125  Identities=23%  Similarity=0.355  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039506           60 LFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYT  139 (424)
Q Consensus        60 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~  139 (424)
                      ++||...+..|...++ .||....++|+..+.+ ++++....+++.....+++++...+..+.++...++.+++.|++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4699999999999986 9999999999999998 6666666555433455777888888889887799999999999999


Q ss_pred             CcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          140 NPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       140 ~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      +++.++.+.++.|+++.+++++++||++++.+      ++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.44  E-value=1.4e-11  Score=114.79  Aligned_cols=264  Identities=17%  Similarity=0.194  Sum_probs=209.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHH
Q 039506           78 NQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFL  157 (424)
Q Consensus        78 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~l  157 (424)
                      ++..+.+.+-+.+.++-...+.+++++   ...++.|+.+...++. ...+..+.+.|++|++-..-.+-..+--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~t-n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFT-NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHH-hhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            478888999999988886655554443   2234455667777777 688889999999999988888888888888899


Q ss_pred             HHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhh
Q 039506          158 LAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQW  237 (424)
Q Consensus       158 la~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  237 (424)
                      .+.++.|+|.+..+      .....+.-.|+-+...++...  ..+           ++                |.++.
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~--s~~-----------~~----------------g~~ns  170 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD--SSS-----------KS----------------GRENS  170 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC--Ccc-----------cc----------------CCCCc
Confidence            99999999999999      999999999998888654432  111           11                22466


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcccc---cchhHHHHHHHHHHH
Q 039506          238 HLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS---LTQSELFAVIYAGII  313 (424)
Q Consensus       238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~  313 (424)
                      .+|+.+....-++=+..+....++.++.. ++..++.+.+++.++.........+.......   .++..+.-++.... 
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-  249 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-  249 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-
Confidence            79999999999999999999998888654 45788999999888776666443332111221   25566777777766 


Q ss_pred             HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506          314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~  381 (424)
                      ++++++.+.++-+++.++...+.++.+.-+++++++.+.+|.+++..||+|..+++.|+.+-...+++
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            67889999999999999999999999999999999999999999999999999999999987766665

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.42  E-value=4.7e-11  Score=111.28  Aligned_cols=252  Identities=12%  Similarity=0.097  Sum_probs=186.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccc---cCcCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHH
Q 039506           79 QLVFCVFRDLLALSILAPIAYFREKRT---RLPMTRRLLM-SFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVF  154 (424)
Q Consensus        79 ~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~-~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~  154 (424)
                      |..++.++.++-+++.......++++.   +-...+++.. +....|+. .++...+-+++++|++.+..+...++.++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccHHHH
Confidence            778888888888777766555544322   2244566544 44456665 799999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCc
Q 039506          155 TFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGL  234 (424)
Q Consensus       155 ~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  234 (424)
                      +.+++.+|.=||+++.-      ..-+++...|+.+.++ +..                                     
T Consensus       124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-KsT-------------------------------------  159 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KST-------------------------------------  159 (349)
T ss_pred             HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-ccc-------------------------------------
Confidence            99999999999998865      5555666666666663 221                                     


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CcchhHHHHHHHHHHHHHHHHHHhcCCCcc-----ccc-ch-hH
Q 039506          235 DQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP----SSLSVTAYSYFFGAVLMVITAFFLTNDSTE-----WSL-TQ-SE  303 (424)
Q Consensus       235 ~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~-~~-~~  303 (424)
                      +-...|..+.+.++++-++.....++..++.|    +|+..+........+.+++..+..|+....     +.. +. ..
T Consensus       160 qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~  239 (349)
T KOG1443|consen  160 QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLI  239 (349)
T ss_pred             ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHH
Confidence            24467888888888888877777777777655    578888888888888888888887753322     111 12 23


Q ss_pred             HHHHHHHHHHHHHHHHH---HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          304 LFAVIYAGIIASAVNYG---LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       304 ~~~l~~~g~~~~~~~~~---l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      +..+..++. ++.+++.   +-+.-+.+++....++.+...-+.+.+++.++.+|.++...|+|..+.+.|+.++.
T Consensus       240 ~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  240 LRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            333333322 3444443   34556788899999999999999999999999999999999999999999999883

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.38  E-value=1.7e-12  Score=108.63  Aligned_cols=125  Identities=22%  Similarity=0.441  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039506          249 MCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKI  328 (424)
Q Consensus       249 l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~  328 (424)
                      ++||.+.+..|+..++.| +.....+++..+.+ +.+.....+..+ ....+...+...++.+++++.+++.++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            468999999999999988 68999999999998 666666655433 234467788888889988889999999999999


Q ss_pred             cChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          329 LGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       329 ~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      .+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.35  E-value=8.9e-13  Score=120.71  Aligned_cols=267  Identities=16%  Similarity=0.146  Sum_probs=204.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccc----c--cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchH
Q 039506           79 QLVFCVFRDLLALSILAPIAYFREKR----T--RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIP  152 (424)
Q Consensus        79 ~~~~~~~r~~~~~l~l~~~~~~~~~~----~--~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~P  152 (424)
                      |..+++++++....+-..+-....+-    .  ...++.+..+..+...++ ..+...+-+..++|++++...+-..+..
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchhh
Confidence            88889999988876666554443321    1  112344555556666666 6777778889999999999999999999


Q ss_pred             HHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCccccccccccc
Q 039506          153 VFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDI  232 (424)
Q Consensus       153 i~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  232 (424)
                      +|++++.++++|+|-+..-      ..++.+.++|-.+=+-  .+                   +..+            
T Consensus       140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvd--qE-------------------~~~~------------  180 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVD--QE-------------------GSTG------------  180 (347)
T ss_pred             hHHHHhHHhhccccccccc------ceeehhheehheeccc--cc-------------------cccC------------
Confidence            9999999999999999887      7888877777655541  11                   0111            


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCcccc----cchhHHHHH
Q 039506          233 GLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPS-SLSVTAYSYFFGAVLMVITAFFLTNDSTEWS----LTQSELFAV  307 (424)
Q Consensus       233 ~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~l  307 (424)
                        .-...|.++++.|.++-|+..+..|+......+ .+...+|+.+.+.+..+|...+.++-...+.    .....|..+
T Consensus       181 --~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  181 --TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILM  258 (347)
T ss_pred             --ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHH
Confidence              133589999999999999999999987666543 4566888889999998888887664222222    145778888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccccCCCC
Q 039506          308 IYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPP  387 (424)
Q Consensus       308 ~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~~~~~~  387 (424)
                      ...|+++..++|. -.+-+|..+|.+..+-.........+++..+.+|..+...|-|-.+++.|..++++.+++++++++
T Consensus       259 tLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  259 TLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             HHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            8888876666655 556688999999999999999999999999999999999999999999999999998877766554


Q ss_pred             C
Q 039506          388 V  388 (424)
Q Consensus       388 ~  388 (424)
                      +
T Consensus       338 ~  338 (347)
T KOG1442|consen  338 A  338 (347)
T ss_pred             c
Confidence            3

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.30  E-value=3e-11  Score=111.15  Aligned_cols=276  Identities=16%  Similarity=0.167  Sum_probs=196.4

Q ss_pred             HHHHHHHHHHhh---cCC----ChHHHHHHHHHHHHHHHHHHHHhhccccc---------------CcCCHHHHHHHHHH
Q 039506           63 GGYHVITKVALN---VGV----NQLVFCVFRDLLALSILAPIAYFREKRTR---------------LPMTRRLLMSFFFL  120 (424)
Q Consensus        63 ~~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---------------~~~~~~~~~~~l~~  120 (424)
                      +.+.+.+|++-+   .|.    .|+..+..-++.-++++..+.+.+.+...               ++.++.   .++.-
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~---lfl~P   92 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV---LFLPP   92 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc---eecCh
Confidence            446677777653   122    26666777777777888887777654211               122222   23334


Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCccc
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALF  200 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~  200 (424)
                      ++| -..+..+.|.|+.+++++..+.+.....+|+.+++..+++++++.+|      |.|+.....|++++-..|-..  
T Consensus        93 al~-Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~--  163 (372)
T KOG3912|consen   93 ALC-DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHL--  163 (372)
T ss_pred             HHH-HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccc--
Confidence            555 67788889999999999999999999999999999999999999999      999999999999886432111  


Q ss_pred             CCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHH
Q 039506          201 GCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFG  279 (424)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~  279 (424)
                       .+              +|.         .  ..++...|+++.+.+-+.-|+.+++.+|..++.+ +|+....|..+++
T Consensus       164 -~~--------------~p~---------~--d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG  217 (372)
T KOG3912|consen  164 -VT--------------DPY---------T--DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFG  217 (372)
T ss_pred             -cc--------------CCc---------c--ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHH
Confidence             00              110         0  1126679999999999999999999999999876 6799999999999


Q ss_pred             HHHHHHHHHHhcCCCc--ccccc----hhHHH---------HHHHHHHHHHHHHHHHHHH----HhhccChhhHhhhcch
Q 039506          280 AVLMVITAFFLTNDST--EWSLT----QSELF---------AVIYAGIIASAVNYGLITW----SNKILGPALVALYNPL  340 (424)
Q Consensus       280 ~~~l~~~~~~~~~~~~--~~~~~----~~~~~---------~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~  340 (424)
                      .+++.+++.....-+.  .++-+    ..+|.         ..++....+...+..+++.    -.|..++++-.++..+
T Consensus       218 ~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~l  297 (372)
T KOG3912|consen  218 LVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSL  297 (372)
T ss_pred             HHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhh
Confidence            7766555553322111  11100    11111         0122222223333333433    3577899999999999


Q ss_pred             hHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          341 QPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       341 ~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      ...+..+++..+..|.++..|+.|.++.+.|++++.
T Consensus       298 Rt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  298 RTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999887

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.23  E-value=5.7e-09  Score=98.02  Aligned_cols=253  Identities=14%  Similarity=0.050  Sum_probs=172.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHH
Q 039506           78 NQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTF  156 (424)
Q Consensus        78 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~  156 (424)
                      +|....+--...+.++-+....+++. .. ..+.+.+...++.|++ ...++...+.+.++.+++.+-.+. .++-+.+.
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p-~~-~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~s   87 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQP-AF-SMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTS   87 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHH
Confidence            45554444444444444444443322 11 1134778888888988 899999999999999999999885 68888899


Q ss_pred             HHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchh
Q 039506          157 LLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQ  236 (424)
Q Consensus       157 lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  236 (424)
                      +.+.++++|--+..+  -..=..++++.++|+++....+.+.....                              +..+
T Consensus        88 l~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~~~~~~~~~~------------------------------~~~~  135 (269)
T PF06800_consen   88 LIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSYQDKKSDKSS------------------------------SKSN  135 (269)
T ss_pred             HHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhccccccccccc------------------------------cccc
Confidence            999999999887665  01113478888899988875433221000                              0125


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHH
Q 039506          237 WHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASA  316 (424)
Q Consensus       237 ~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  316 (424)
                      ...|.+..+++.++|..|.+..|..  +.+ +.....-+.+...+...++....+ . ...  +...|.. +..|+ .-.
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~-~-~~~--~k~~~~n-il~G~-~w~  206 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSK-K-PFF--EKKSWKN-ILTGL-IWG  206 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhccc-c-ccc--ccchHHh-hHHHH-HHH
Confidence            6689999999999999999997763  344 455555554444433333333321 1 111  1223333 33343 345


Q ss_pred             HHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH----HHHHHHHHhhhe
Q 039506          317 VNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV----LGGCLIIAGLYM  374 (424)
Q Consensus       317 ~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~----lG~~lii~g~~l  374 (424)
                      ++..++..+.+..+.+..=.+.-+.++++.+.+.+++||+-+..++    +|+++++.|.++
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            6778899999999999999999999999999999999999887644    688888888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.19  E-value=4.3e-10  Score=106.72  Aligned_cols=133  Identities=19%  Similarity=0.223  Sum_probs=113.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--HHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQ--LVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGI  125 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~  125 (424)
                      ..+|..+.++++++|+...+..|...++ .++  .....+++.++.+++.++....++..  ..+.+++...+..++++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHHH
Confidence            4579999999999999999999998764 664  44455789999988888877654322  335677777888888888


Q ss_pred             HHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506          126 FGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI  189 (424)
Q Consensus       126 ~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~  189 (424)
                      ..++.+++.++++.+++.++.+.++.|+++.+++++++||+++..+      ++|..+.+.|++
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~  260 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence            8999999999999999999999999999999999999999999999      999999999863

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.13  E-value=1.7e-10  Score=95.51  Aligned_cols=104  Identities=28%  Similarity=0.359  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcccc--cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHH
Q 039506           84 VFRDLLALSILAPIAYFREKRT--RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVM  161 (424)
Q Consensus        84 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l  161 (424)
                      .+|+..+.+++..+...+++..  .+..+++.+.+.+..|.++...++.+++.|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5799999999988887765521  12233455666777788866699999999999999 58889999999999999999


Q ss_pred             HhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506          162 MGTERVNLLTTEGQAKVGGTFICVSGAILMVLF  194 (424)
Q Consensus       162 ~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~  194 (424)
                      ++|||+++++      +.+++++++|++++.+.
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence            9999999999      99999999999999853

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.11  E-value=4.3e-10  Score=98.53  Aligned_cols=215  Identities=15%  Similarity=0.219  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCccc
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALF  200 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~  200 (424)
                      .++ ..+.++.|..|++..+++.++.+..+...|+.+++++.+++|+...+      +.+.++++.|++++.+.|..-  
T Consensus        60 ~i~-Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~~--  130 (290)
T KOG4314|consen   60 SIF-WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNEH--  130 (290)
T ss_pred             EEE-EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccchh--
Confidence            455 56788999999999999999999999999999999999999999999      999999999999998543321  


Q ss_pred             CCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHH
Q 039506          201 GCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGA  280 (424)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~  280 (424)
                                                        .....|+.+++.++.+.|+|.+.-|+.....+- -....++.-.+.
T Consensus       131 ----------------------------------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF  175 (290)
T KOG4314|consen  131 ----------------------------------ADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGF  175 (290)
T ss_pred             ----------------------------------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHH
Confidence                                              134589999999999999999999998776551 111111111111


Q ss_pred             ----HHHHH-HHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcC
Q 039506          281 ----VLMVI-TAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLG  354 (424)
Q Consensus       281 ----~~l~~-~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~  354 (424)
                          ....+ +.+.+. ....|. .....|..+...+.+..++ .++.+.++....|...++-......--...+.++-+
T Consensus       176 ~NL~~~~~~~lIL~~T-~VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~  253 (290)
T KOG4314|consen  176 FNLCFISFPALILAFT-GVEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQE  253 (290)
T ss_pred             HHHHHHhhhHHHHHHh-chHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHH
Confidence                11111 111222 222332 2345677776666654443 345788899999999999999999999999977666


Q ss_pred             CCcchhhHHHHHHHHHhhheeeeeccc
Q 039506          355 SPIYLGSVLGGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       355 e~~~~~~~lG~~lii~g~~l~~~~~~~  381 (424)
                      -..+...+.|-.++++|.+++..++.+
T Consensus       254 l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  254 LEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             HHHHHHHHHHHHHHHHhHHheecccch
Confidence            667899999999999999998876543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.08  E-value=3.7e-09  Score=92.00  Aligned_cols=137  Identities=18%  Similarity=0.256  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcC------CCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc-----c-----chhH
Q 039506          240 GVLCLIGNCMCMAAFIAIQAPILRKY------PSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS-----L-----TQSE  303 (424)
Q Consensus       240 G~l~~l~a~l~~a~~~v~~k~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~-----~~~~  303 (424)
                      |.++++.|.++.+++.+..|+..++.      .++..+..+....+.+.+.+.....+.......     .     ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988872      257899999999999999999888775331111     0     1234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          304 LFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       304 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +..++..|+ .........+..+++.+|...++...+..+..++++++++||+++..+++|+++.++|++++++
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            444455555 3555667789999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.03  E-value=4.9e-09  Score=100.98  Aligned_cols=133  Identities=15%  Similarity=0.186  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHH
Q 039506          241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYG  320 (424)
Q Consensus       241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  320 (424)
                      .++.++++++++...+..|+..++.+ +  ...+....+++.+.+...... ....++.....++..+..+.++....+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            46789999999999999998877744 2  345555666666666555432 1133333344455555556667788899


Q ss_pred             HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          321 LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       321 l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      ++++++++.+++.++++.+++|+++.+++++++||+++..+++|+++++.|+++...
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.03  E-value=1.9e-07  Score=91.27  Aligned_cols=298  Identities=12%  Similarity=0.074  Sum_probs=179.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH-HHHHHHHHHH---HHHHhhc-ccccCcCCHHHHHHHHHH
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVF-RDLLALSILA---PIAYFRE-KRTRLPMTRRLLMSFFFL  120 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~---~~~~~~~-~~~~~~~~~~~~~~~l~~  120 (424)
                      ++...|+++.+++.++||...+..|.. +. .+ ++..+. ...++.++.-   -....+. -......+.+.+...++.
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKKV-KK-WS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             chhHHHHHHHHHHHHHhhccccccccc-CC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            456789999999999999999999984 32 33 222111 1111111111   0111100 011222467777888888


Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhccc---ccccccccchhhHHHHHHHhHhhhhhccC
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERV---NLLTTEGQAKVGGTFICVSGAILMVLFRG  196 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~---~~~~~~~~~~~~g~~l~i~Gv~li~~~~~  196 (424)
                      |++ ...++..++.++++.+.+.+..+ ..++-++..++..++++|-.   +..+  +..-.+|++++++|+++......
T Consensus        80 G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         80 GAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhh
Confidence            888 89999999999999999999877 57999999999999998754   2222  23347899999999999985211


Q ss_pred             CcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHH-------HHHHHhhh-cCCCc
Q 039506          197 PALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFI-------AIQAPILR-KYPSS  268 (424)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~-------v~~k~~~~-~~~~~  268 (424)
                      ..-.+.+++          +.               +..+...|.+.+++++++++.|.       ...+...+ +.+ +
T Consensus       157 ~k~~~~~~~----------~~---------------~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~  210 (345)
T PRK13499        157 LKERKMGIK----------KA---------------EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-P  210 (345)
T ss_pred             hcccccccc----------cc---------------cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-c
Confidence            110000000          00               11266799999999999999999       44433211 223 2


Q ss_pred             chhHHHHHH---HHHHHHH-HHHHHh--cCCC----cccccc----hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhH
Q 039506          269 LSVTAYSYF---FGAVLMV-ITAFFL--TNDS----TEWSLT----QSELFAVIYAGIIASAVNYGLITWSNKILGPALV  334 (424)
Q Consensus       269 ~~~~~~~~~---~~~~~l~-~~~~~~--~~~~----~~~~~~----~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~  334 (424)
                      ......+..   .+..+.- +.....  .++.    .+...+    .+.....+..|+ .=.+++.++..+....+.+..
T Consensus       211 ~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~  289 (345)
T PRK13499        211 LYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYD  289 (345)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccc
Confidence            333333332   3333222 111211  1111    111111    122222233333 345567777777777754433


Q ss_pred             h----hhcchhHHHHHHHHHHHcCCCcc------hhhHHHHHHHHHhhheeee
Q 039506          335 A----LYNPLQPAASAFLSKIFLGSPIY------LGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       335 s----~~~~~~pi~~~l~~~l~~~e~~~------~~~~lG~~lii~g~~l~~~  377 (424)
                      .    +.+.+..+++.+.+. ++||.-+      ..-++|++++++|.++...
T Consensus       290 ~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        290 FVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             hHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            2    444788899999998 5999877      5668999999999987654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.01  E-value=9.8e-09  Score=99.49  Aligned_cols=136  Identities=11%  Similarity=0.036  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ..|.++.+.++++|+.+.+..|...++ .++..... ...++.+++.++......  ....+...+...+..|+++..+.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999998764 77777644 445566666666655432  11234555555678899988999


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLF  194 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~  194 (424)
                      +.++++++++.+++.++++.+++|+++.++++++++|+++..+      ++|.++.+.|++.....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      99999999999998743

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.01  E-value=1.9e-08  Score=92.48  Aligned_cols=225  Identities=17%  Similarity=0.239  Sum_probs=175.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       114 ~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      |+.+..++.+ ..+.+.+-.-++.|++-..-.++..+--+=+.+.+.++-+.|....+      .++..+..+|+++.+.
T Consensus       106 ~rtY~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  106 WRTYVILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTL  178 (367)
T ss_pred             hhHhhhhHhh-hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhh
Confidence            4456666777 67788888888888886666666666666677888899999988888      9999999999999987


Q ss_pred             ccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhH
Q 039506          194 FRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVT  272 (424)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~  272 (424)
                      .|.+.                   +|               +...+|+++.-.|-++-|.-..+..+..+..+ +...+.
T Consensus       179 ADs~~-------------------sP---------------NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~Emv  224 (367)
T KOG1582|consen  179 ADSQT-------------------SP---------------NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMV  224 (367)
T ss_pred             ccccc-------------------CC---------------CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEE
Confidence            65543                   23               24568888888888888887777888887766 235678


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCccccc----chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHH
Q 039506          273 AYSYFFGAVLMVITAFFLTNDSTEWSL----TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFL  348 (424)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~  348 (424)
                      ++...++.+.++......++-...|+.    +.+.+....+... .+.++......-++..++..++.+....-.+++++
T Consensus       225 fySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~l  303 (367)
T KOG1582|consen  225 FYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILL  303 (367)
T ss_pred             EeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHH
Confidence            888888888888877777654444543    3345555555554 46667776777789999999999999999999999


Q ss_pred             HHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506          349 SKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       349 ~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~  380 (424)
                      ++++|..++|....-|..+++.|+++-.+.++
T Consensus       304 SfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  304 SFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            99999999999999999999999998877663

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.00  E-value=6.2e-09  Score=101.01  Aligned_cols=137  Identities=18%  Similarity=0.178  Sum_probs=110.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc--c-chhHHHHHHHHHH
Q 039506          236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS--L-TQSELFAVIYAGI  312 (424)
Q Consensus       236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~l~~~g~  312 (424)
                      +...|++++++++++|+...+..|.. .+.+ |....+++..++.+.+.+...... +.....  . +...+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHHH
Confidence            55689999999999999999999875 5666 689999999999887766654432 111110  0 223332 233566


Q ss_pred             HHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          313 IASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       313 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      ++....+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6778889999999999999999999999999999999999999999999999999999999765

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.00  E-value=8.7e-09  Score=99.80  Aligned_cols=137  Identities=15%  Similarity=0.056  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ..|.++.++++++|+...+..|...+.  ++.....+++..+.+.+.++............+.+.|...+..++++....
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999987543  345566788888888877776554322111235677788888899888899


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      +.+++.++++.+++.++.+.++.|+++++++++++||+++..+      ++|.++.+.|+++...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      9999999999999864

>TIGR00688 rarD rarD protein

Probab=98.96  E-value=1e-08  Score=97.25  Aligned_cols=135  Identities=12%  Similarity=0.211  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCC---cccc-cchhH-HHHHHHHHHH
Q 039506          239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDS---TEWS-LTQSE-LFAVIYAGII  313 (424)
Q Consensus       239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~-~~~~~-~~~l~~~g~~  313 (424)
                      .|.++.++++++|+...+..|. ..+.+ |....+++++++.+.+.+.........   ..++ .+... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            3788999999999999999998 44566 699999999999887766554433110   1111 11222 333444454 


Q ss_pred             HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      .....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.83  E-value=6.2e-08  Score=93.99  Aligned_cols=133  Identities=14%  Similarity=0.150  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ..|.++++.++++|+.+.+..|...++ .++....+   ....+++.+........ ....+...+...+..++ ...++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAA-AMGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHH-HHHHH
Confidence            458899999999999999999998654 67665432   22333333333333221 12345666666666665 47889


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      +.+++.++++.+++.++.+.++.|++..++++++++|+++..+      ++|.++.+.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      9999999999988864

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.82  E-value=9.1e-08  Score=95.01  Aligned_cols=138  Identities=17%  Similarity=0.227  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHH
Q 039506          239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVN  318 (424)
Q Consensus       239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  318 (424)
                      .-++.+++.-++|+.+.++.|...+..-+|....++++.+++++++++.+..+........+.+.|..+...|+++ .+.
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~   91 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMY   91 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHH
Confidence            4457778889999999999999988765678999999999999988887765421111112356677777788766 556


Q ss_pred             HHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH------cCCCcchhhHHHHHHHHHhhheeee
Q 039506          319 YGLITWSNKILGPALVALYNPLQPAASAFLSKIF------LGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       319 ~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~------~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +.+++.++++++++.++++.++.|+++.++++++      ++|+++..+++|+++.++|+.++..
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999      6999999999999999999987664

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.81  E-value=1.6e-07  Score=90.98  Aligned_cols=280  Identities=14%  Similarity=0.172  Sum_probs=157.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506           45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg  124 (424)
                      +.+...|..+.+.++++-+......|....+ .+.   .-.|.              +++.+...+++.|+    .|++.
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~l~~~~W~----~G~~~   59 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSYLRRPLWW----IGLLL   59 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHHHhhHHHH----HHHHH
Confidence            4567789999999999999999998887643 211   00010              00001111222222    33343


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN  204 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~  204 (424)
                      +.++..+.+.|+.+.|.+..+.+..+.-++..+++..++|||+++.+      +.|+.+++.|..++....+++. +.. 
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~-~~~-  131 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEE-PIH-  131 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCC-CcC-
Confidence            56666788899999999999999999999999999999999999999      9999999999998875433210 000 


Q ss_pred             CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHH--
Q 039506          205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL--  282 (424)
Q Consensus       205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~--  282 (424)
                                   ++       .++.+.-.+..-..+.... ..+...+.....+|..++ + .+.......+.+...  
T Consensus       132 -------------t~-------~~l~~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl  188 (300)
T PF05653_consen  132 -------------TL-------DELIALLSQPGFLVYFILV-LVLILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVL  188 (300)
T ss_pred             -------------CH-------HHHHHHhcCcceehhHHHH-HHHHHHHHHhhcchhccc-c-eEEEEEEeccccchhhh
Confidence                         00       0000000000001111111 112222222223332222 1 111111111111111  


Q ss_pred             -----HHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchh-HHHHHHHHHHHcCCC
Q 039506          283 -----MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQ-PAASAFLSKIFLGSP  356 (424)
Q Consensus       283 -----l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~-pi~~~l~~~l~~~e~  356 (424)
                           ...+.....++ ..+ .++..|..++.. +.+........++|+++.+++.+.++.+.- ...+++-+.++++|.
T Consensus       189 ~~K~i~~~i~~~~~g~-~~f-~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~  265 (300)
T PF05653_consen  189 SAKAISILIKLTFSGD-NQF-TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEF  265 (300)
T ss_pred             HHHHHHHHHHHHhcCc-hhh-hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhccc
Confidence                 11111111111 111 134455444333 335565667789999999998877766654 455666678888876


Q ss_pred             c--ch----hhHHHHHHHHHhhheeeeecc
Q 039506          357 I--YL----GSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       357 ~--~~----~~~lG~~lii~g~~l~~~~~~  380 (424)
                      .  +.    ....|+.+++.|++++...+.
T Consensus       266 ~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  266 SRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             ccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            4  44    345788999999998875443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.79  E-value=1.4e-07  Score=79.51  Aligned_cols=121  Identities=14%  Similarity=0.131  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHH
Q 039506          239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVN  318 (424)
Q Consensus       239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  318 (424)
                      .|+++.+++.++-+...++.|+-.++.++ ...... . .    ...... .            .....+++|+++.+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~-~----~~~~~~-~------------~p~~~i~lgl~~~~la   61 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F-I----AALLAF-G------------LALRAVLLGLAGYALS   61 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H-H----HHHHHH-h------------ccHHHHHHHHHHHHHH
Confidence            46788899999999999999998877663 221111 0 0    000000 0            0112467788899999


Q ss_pred             HHHHHHHhhccChhhHhhhcchhHHHHHHHHHH--HcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          319 YGLITWSNKILGPALVALYNPLQPAASAFLSKI--FLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       319 ~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l--~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      +.+|.+++++.+.+.+.++..+.++...+.++.  ++||++|+.+++|+++|++|+++....+
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999998888888875  8999999999999999999999987543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.76  E-value=2.5e-07  Score=89.95  Aligned_cols=138  Identities=12%  Similarity=0.163  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh---HHHHHHHHHHHHHHHHHHHHhhcccc-----cCcCCHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQ---LVFCVFRDLLALSILAPIAYFREKRT-----RLPMTRRLLMSFFFL  120 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~---~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~l~~  120 (424)
                      ..|..+++.++++|+...+..|...++ .++   .....+....+.+.+...........     ....+...+...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            469999999999999999999987643 222   23333344443333332222222111     123466778888899


Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      |+++....+.+++.++++.+++.++.+..+.|++..++++++++|+++..+      ++|.++.++|+.+...
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999      9999999999988763

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.74  E-value=7.3e-08  Score=88.98  Aligned_cols=262  Identities=13%  Similarity=0.083  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCcchhhhcccchHHHHHHH
Q 039506           80 LVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSY-TNPTYAAAIQPSIPVFTFLL  158 (424)
Q Consensus        80 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~-~~~~~a~ii~~l~Pi~~~ll  158 (424)
                      -.+++.++++-+.--+++--.- ...+++.+.|++   ...-.+ .+..+.+-++|+++ ++...=-++..-.++.++++
T Consensus        34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y---~i~V~m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDY---AITVAM-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc-cccCCCCchhhh---heehhe-eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            3456777766655544432110 011233345543   333333 46677788888887 45555556678899999999


Q ss_pred             HHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccC-CCCCCCccccccccCCCCCCcccccccccccCchhh
Q 039506          159 AVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFG-CGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQW  237 (424)
Q Consensus       159 a~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  237 (424)
                      +++++|+|.+.+|      +.++++..+|+++.+..+.++... .+..+.      ++..+              ....|
T Consensus       109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~------~~~~~--------------~~~~w  162 (330)
T KOG1583|consen  109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRSKLSGLDS------GSAQS--------------DFFWW  162 (330)
T ss_pred             HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhhhhccccc------Ccccc--------------cchHH
Confidence            9999999999999      999999999999998765544322 000000      00001              12367


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHH--------HhcCCCccccc----chhHH
Q 039506          238 HLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAF--------FLTNDSTEWSL----TQSEL  304 (424)
Q Consensus       238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~----~~~~~  304 (424)
                      ..|+.+..++-+..|.-.+..+..-+++. .+-..++|..+++.+..+...-        .+..+....+.    -+..|
T Consensus       163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~  242 (330)
T KOG1583|consen  163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW  242 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence            88888777777776665555554444432 2346788888887766544321        00000000110    11233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----hhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          305 FAVIYAGIIASAVNYGLITWS----NKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       305 ~~l~~~g~~~~~~~~~l~~~a----~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      ..++     +..+.+....++    ..+.++.+++++..+.-.++.+++.+.|+.++++.-|+|..+++.|.+++..
T Consensus       243 ~yLl-----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  243 VYLL-----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHH-----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3322     233344333333    3455778889999999999999999999999999999999999999998764

>TIGR00803 nst UDP-galactose transporter

Probab=98.73  E-value=1.2e-07  Score=88.16  Aligned_cols=203  Identities=10%  Similarity=0.055  Sum_probs=126.9

Q ss_pred             CcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcc-----------cCCCCCCCc
Q 039506          140 NPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPAL-----------FGCGNEDFV  208 (424)
Q Consensus       140 ~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~-----------~~~~~~~~~  208 (424)
                      +........+..++++++..+.+.++|.+..+      +++.++...|++.....+.+..           .+.++..  
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~--   74 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS--   74 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC--
Confidence            33445566778888888888888888888777      8888888888876543222110           0000000  


Q ss_pred             cccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHH--
Q 039506          209 GENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT--  286 (424)
Q Consensus       209 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~--  286 (424)
                             + ..            ...+....|..+.+.++.+-+...+..++..++.+..    .|...+......+.  
T Consensus        75 -------~-~~------------~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~----~~~~~~~l~~~~~~~~  130 (222)
T TIGR00803        75 -------A-KT------------LMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM----FWSRNLQLPLFGLFST  130 (222)
T ss_pred             -------c-cc------------cccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc----hHHHHHHHHHHHHHHH
Confidence                   0 00            0112456788888888888888888887766554421    22222222221111  


Q ss_pred             --HHHhcCCC--cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH
Q 039506          287 --AFFLTNDS--TEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV  362 (424)
Q Consensus       287 --~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~  362 (424)
                        ........  ..+.. ...+....+.-++...++..+..+.+|+.++...+....++++++.+++++++|++++..++
T Consensus       131 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~  209 (222)
T TIGR00803       131 FSVLLWSDGTLISNFGF-FIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFY  209 (222)
T ss_pred             HHHHhhcccchhhccCc-ccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHH
Confidence              11111100  01110 01111112222334566777899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhee
Q 039506          363 LGGCLIIAGLYMV  375 (424)
Q Consensus       363 lG~~lii~g~~l~  375 (424)
                      +|+.+++.|+.++
T Consensus       210 ~g~~lV~~~~~lY  222 (222)
T TIGR00803       210 LGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHeeeEeC
Confidence            9999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.64  E-value=2.1e-07  Score=90.51  Aligned_cols=140  Identities=14%  Similarity=0.192  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhcccccCcC---------CH-HHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNV-GVNQLVFCVFRDLLALSILAPIAYFREKRTRLPM---------TR-RLLMS  116 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~~  116 (424)
                      +..|.++.++++++|+...+..|...+. ++++..++.+.+..+.++++|+....+.......         .. ..+..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3569999999999999999999987651 3899999999999999999988765432110000         00 11111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      .+..+.......+.+++.+++++++..+++...+.|++++++++++++|+++..+      ++|.++++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence            2223332233344677789999999999999999999999999999999999999      9999999999998874

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.62  E-value=2.1e-07  Score=76.94  Aligned_cols=106  Identities=23%  Similarity=0.386  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH
Q 039506          274 YSYFFGAVLMVITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIF  352 (424)
Q Consensus       274 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~  352 (424)
                      +....+.+.+........+....++ ...+.+..++..|.++...++.++.++.++.++ .++++..++|+++.+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            4555666666555555332111111 123556666677776666899999999999994 88899999999999999999


Q ss_pred             cCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506          353 LGSPIYLGSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       353 ~~e~~~~~~~lG~~lii~g~~l~~~~~~  380 (424)
                      ++|+++..+++|.+++++|++++.+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999887543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.53  E-value=1.6e-08  Score=91.84  Aligned_cols=278  Identities=17%  Similarity=0.101  Sum_probs=186.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      .++.+++-++.||....+....   |-+|.+.+.--.+.+.++.+.+++..    .+..+.+.+...++.|.+ ...++.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~----~p~~T~~~~iv~~isG~~-Ws~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFV----SPELTLTIFIVGFISGAF-WSFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheee----cCccchhhHHHHHHhhhH-hhhhhh
Confidence            5677889999999988776544   45677766555555555555444442    335578888888888888 799999


Q ss_pred             HHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506          131 LFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG  209 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~  209 (424)
                      ..+.|+++.+++.+..+. .++-+-+.+++.+.+||-.+..+  ...-.+++++.++|+.+-...+...    .++    
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~~~~~n----k~~----  144 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSKQDRNN----KEE----  144 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeeeecccc----ccc----
Confidence            999999999999999885 68888999999999999988766  1111345666677776665322210    000    


Q ss_pred             ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506          210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF  289 (424)
Q Consensus       210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  289 (424)
                             +.|               ++...|....+.|.++|..|.+..+...  .+ -+....-+.....+..+.+...
T Consensus       145 -------~~~---------------~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqAiGMv~~ali~~~~  199 (288)
T COG4975         145 -------ENP---------------SNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQAIGMVIGALILGFF  199 (288)
T ss_pred             -------cCh---------------HhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHHHHHHHHHHHHhhc
Confidence                   112               3667888888999999999999877664  33 2333333333322222222222


Q ss_pred             hcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH----HHH
Q 039506          290 LTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV----LGG  365 (424)
Q Consensus       290 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~----lG~  365 (424)
                      .    ...+.+...|. -+.-|.+ =.++...+..+.++.+.+..=.+.-+..+++.+-+.++++|+-|..++    +|.
T Consensus       200 ~----~~~~~~K~t~~-nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi  273 (288)
T COG4975         200 K----MEKRFNKYTWL-NIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI  273 (288)
T ss_pred             c----cccchHHHHHH-HHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence            1    11121223333 3334443 355677788888888887777777788899999999999999998875    588


Q ss_pred             HHHHHhhheeee
Q 039506          366 CLIIAGLYMVTW  377 (424)
Q Consensus       366 ~lii~g~~l~~~  377 (424)
                      ++++.|.++...
T Consensus       274 ilivvgai~lg~  285 (288)
T COG4975         274 ILIVVGAILLGI  285 (288)
T ss_pred             HHHHHHhhhhhe
Confidence            888888776543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.51  E-value=4.5e-06  Score=79.87  Aligned_cols=134  Identities=21%  Similarity=0.245  Sum_probs=107.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506           48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCV-FRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF  126 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~  126 (424)
                      ...+..+.+.++++|+.+.+..|... + .++..... +.+.....+..+..... ..  .....+.+......|+++..
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLSG-FG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhcc-cc--ccCCHHHHHHHHHHHHHHHH
Confidence            45899999999999999999999876 3 66666665 34332222222222211 11  24467788888999999777


Q ss_pred             HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      .++.+++.+++..+++.++.+..+.|++..++++++++|+++..+      ++|..+.+.|+.+..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~  286 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999      999999999999886

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.48  E-value=2.9e-06  Score=82.12  Aligned_cols=128  Identities=12%  Similarity=0.118  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH----HHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDL----LALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg  124 (424)
                      .+|+++.++++++++.+.+..|..   +.+|...++....    .+.+++.++   + + .+ +...+..+..+..|++ 
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~-~~~~~~~~~~~~~Gi~-  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AK-PLKKYAILLNILPGLM-  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-c-cc-chHHHHHHHHHHHHHH-
Confidence            469999999999999999999976   3788887555555    333333333   1 1 11 2234444556668988 


Q ss_pred             HHHHHHHHHHHhh-ccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchh----hHHHHHHHhHhhhh
Q 039506          125 IFGNQLLFLLGLS-YTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKV----GGTFICVSGAILMV  192 (424)
Q Consensus       125 ~~~~~~~~~~al~-~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~----~g~~l~i~Gv~li~  192 (424)
                      ....+.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++      +    +|.++.+.|+.++.
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence            7999999999999 9999999999999999999999999999999999      8    99999999998875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.45  E-value=4.6e-06  Score=72.43  Aligned_cols=134  Identities=20%  Similarity=0.263  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccccc-C-----c-----CCHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNV------GVNQLVFCVFRDLLALSILAPIAYFREKRTR-L-----P-----MTRRL  113 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~-----~-----~~~~~  113 (424)
                      |.++++.+.++.+...+..|...+.      +.++..+..+....+.+++++.....+.... .     .     ...+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4678899999999999999987754      6889999999999999999998777655321 0     0     02344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506          114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM  191 (424)
Q Consensus       114 ~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li  191 (424)
                      +..++..|++ ..+.+...+..++++++...++....-.+++.++++++++|+++..+      ++|+.+++.|+++-
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhee
Confidence            5566667777 57888999999999999999999999999999999999999999999      99999999998753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.44  E-value=7.8e-06  Score=81.24  Aligned_cols=134  Identities=13%  Similarity=0.075  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 039506          243 CLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLI  322 (424)
Q Consensus       243 ~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~  322 (424)
                      +.++-=.+...+++..|...+..|-|+.+..++++++.+.+.+..................+..++.+|++. ...+...
T Consensus        53 ~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~-~~~~~~~  131 (350)
T PTZ00343         53 LFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH-LFVHFGA  131 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHH
Confidence            333333444566888899988887579999999999987655443321111111211234566777777754 4456667


Q ss_pred             HHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          323 TWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       323 ~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +.++++.+++.++++.+++|++++++++++++|+++..+++|++++++|+.+...
T Consensus       132 ~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        132 VISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            8999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.37  E-value=6e-06  Score=67.93  Aligned_cols=70  Identities=21%  Similarity=0.154  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      ....+++++.+++.++..++++.|.+.+..+.++.++++.+++++++|||++.++      ++|+.+.++|++++.
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            3344446688899999999999999999999999999999999999999999999      999999999999885

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.36  E-value=5.3e-06  Score=76.03  Aligned_cols=135  Identities=12%  Similarity=-0.002  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ..|..+.+.+..||+.+.+..|...+. .+...-+.+.+.+++++.+|+-.......  -..+......+..++++..+.
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhcccc
Confidence            478999999999999999999998864 56666688999999999999877544322  235677778888999999999


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      +.+-..+++..|...-+++.++.|.+.++.+++++||+++..|      |.++...+.+..=.+
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~  281 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST  281 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999      999998888876444

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.31  E-value=6.9e-06  Score=67.57  Aligned_cols=67  Identities=10%  Similarity=0.051  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          310 AGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       310 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      .++++..+++.++.+++++.+.+.+..+.++.++.+.+++++++||++++.+++|.+++++|++++.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445677799999999999999999999999999999999999999999999999999999998754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.18  E-value=4.2e-05  Score=74.89  Aligned_cols=142  Identities=11%  Similarity=0.086  Sum_probs=109.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc--CcCCHHHHHHHHHHHHH
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR--LPMTRRLLMSFFFLGLT  123 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~~~~~~~~~~l~~g~l  123 (424)
                      .+..+|-+++++++.++|.+.+.-+...++ .+..+....--++++++..+....-++...  ...+.+....++..+ +
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-L  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-H
Confidence            356789999999999999999999998875 788887766667777777766655444322  123444443333333 3


Q ss_pred             HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhcc
Q 039506          124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFR  195 (424)
Q Consensus       124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~  195 (424)
                      +....+.+.-..+++.++....+-.-+..+++.++.++++|+++++..      ++|.++.++|.++....+
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccC
Confidence            366777777888999999888888888999999999999999999999      999999999999987533

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.16  E-value=1.6e-05  Score=74.67  Aligned_cols=138  Identities=15%  Similarity=0.212  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc--cchhHHHHHHHHHHHHH
Q 039506          238 HLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS--LTQSELFAVIYAGIIAS  315 (424)
Q Consensus       238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~  315 (424)
                      ..|+++++.|-+.|+..-...|-. +..+ +..+..++.+.+.+.++.......+....++  .+++.+...+..+.+ .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            479999999999999988877664 5556 4788999999988887777666543222222  245666666666664 5


Q ss_pred             HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      ...+.++.+|........+|+-.+++|.+.++++.++++|+++..|++..++..+|+....+.
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            668899999999999999999999999999999999999999999999999999999876644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.15  E-value=3.5e-05  Score=65.04  Aligned_cols=118  Identities=19%  Similarity=0.105  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ  129 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~  129 (424)
                      .++++.++..++-+...++.|...++ .+....... . ..    .....   .      ++   ..++..|+.+..+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~----~~~~~---~------~p---~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IA----ALLAF---G------LA---LRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HH----HHHHH---h------cc---HHHHHHHHHHHHHHH
Confidence            36777888888888888888887764 443332111 1 00    00000   0      01   125667888889999


Q ss_pred             HHHHHHhhccCcchhhhcccchHHHHHHHHHH--HhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          130 LLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVM--MGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       130 ~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l--~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      .++..++++.|++.+..+....++++.+.++.  ++||+++..+      ++|+++.++|++++.
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~  121 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            99999999999999999999998888888885  8999999999      999999999999986

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.00  E-value=6.2e-05  Score=71.61  Aligned_cols=281  Identities=12%  Similarity=0.168  Sum_probs=161.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHH
Q 039506           44 MEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLT  123 (424)
Q Consensus        44 ~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  123 (424)
                      |+.+...|..+.+.+.++.|.++.+-|....+ ...   .-               .|.+....+ ..+.  +....|.+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~-yl~~--~~Ww~G~l   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYG-YLKE--PLWWAGML   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcc-hhhh--HHHHHHHH
Confidence            45567788999999999999999998887654 211   11               111111111 1122  22234666


Q ss_pred             HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506          124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG  203 (424)
Q Consensus       124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~  203 (424)
                      .+.++...-+.|..+.|++..+.+-.+..+..++++..++|||++...      .+|+.+++.|..+++...+.+    .
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~haP~e----~  142 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIHAPKE----Q  142 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEecCcc----c
Confidence            667777888889999999999999999999999999999999999999      999999999999998532211    0


Q ss_pred             CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHH
Q 039506          204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM  283 (424)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l  283 (424)
                      +.  ...                .++++.-.+.--..+...+...  ..+-....|+. ....+.+.......+.+....
T Consensus       143 ~i--~t~----------------~el~~~~~~~~Fliy~~~iil~--~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV  201 (335)
T KOG2922|consen  143 EI--ESV----------------EEVWELATEPGFLVYVIIIILI--VLILIFFYAPR-YGQTNILVYIGICSLIGSLTV  201 (335)
T ss_pred             cc--ccH----------------HHHHHHhcCccHHHHHHHHHHH--HHHHheeeccc-ccccceeehhhHhhhhcceee
Confidence            00  000                1111111111111111111111  11112222211 111122333333333321110


Q ss_pred             -----HHHH--HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcch-hHHHHHHHHHHHcCC
Q 039506          284 -----VITA--FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPL-QPAASAFLSKIFLGS  355 (424)
Q Consensus       284 -----~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pi~~~l~~~l~~~e  355 (424)
                           +-.+  .-..+. .... .+..|..++.... |...-.--.++|++..+++.++++.+. -..++++.+.++|+|
T Consensus       202 ~svKalg~aiklt~~g~-~ql~-~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fke  278 (335)
T KOG2922|consen  202 MSVKALGIAIKLTFSGN-NQLF-YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKE  278 (335)
T ss_pred             eeHHHHHHHHHHHhcCC-cccc-cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence                 0011  111111 1111 2345555444443 455556668999999999888887764 345666778888887


Q ss_pred             Cc--c----hhhHHHHHHHHHhhheeeeecc
Q 039506          356 PI--Y----LGSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       356 ~~--~----~~~~lG~~lii~g~~l~~~~~~  380 (424)
                      .-  +    .....|+..++.|++++...+.
T Consensus       279 w~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  279 WSGQDALDIAGELCGFVTIFLGIFLLHRTKD  309 (335)
T ss_pred             hcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence            64  2    3466799999999998865443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.94  E-value=9.7e-05  Score=69.72  Aligned_cols=131  Identities=18%  Similarity=0.074  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      .+++...+++.+.+..+.++.|..   ++++....+-+.+...+.-+++....+++   . ..|..++-++.|++ ...+
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~~---~-~~k~~~~nil~G~~-w~ig  208 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKKP---F-FEKKSWKNILTGLI-WGIG  208 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhccccc---c-cccchHHhhHHHHH-HHHH
Confidence            468888999999999999998874   47787766655444444444443333221   1 22333455677888 7899


Q ss_pred             HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI  189 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~  189 (424)
                      +.+++.+.+....+.+-.+..+.+++..+.+.+++||+=++++  ....++|+++.++|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999977665  2233455555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.84  E-value=5.6e-06  Score=76.38  Aligned_cols=153  Identities=14%  Similarity=0.239  Sum_probs=105.9

Q ss_pred             cccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccch
Q 039506          222 VGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQ  301 (424)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  301 (424)
                      .+|+.--+-..+.+..+.|.++..++ ..+-..+++.++.....|  ....-..+++-.++..+..+.+-.  ..+- +.
T Consensus        21 ~r~~e~~~qri~~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p--~e~a~~r~l~~mlit~pcliy~~~--~v~g-p~   94 (346)
T KOG4510|consen   21 PRWLERTLQRISKDKPNLGLLLLTVS-YFFNSCMVVSTKVLENDP--MELASFRLLVRMLITYPCLIYYMQ--PVIG-PE   94 (346)
T ss_pred             ccHHHHHhhHhhcCCCccCceehhhH-HHHhhHHHhhhhhhccCh--hHhhhhhhhhehhhhheEEEEEee--eeec-CC
Confidence            34544444444556677899888888 777778888877665544  445445554444444444333221  1111 11


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506          302 SELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       302 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~  381 (424)
                      ..=.+++.=|+ -+..+..+.++++++.+.+.+.++..+.|++++++++++++|+.+..+.+|..+.+.|++++.+.+.-
T Consensus        95 g~R~~LiLRg~-mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl  173 (346)
T KOG4510|consen   95 GKRKWLILRGF-MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL  173 (346)
T ss_pred             CcEEEEEeehh-hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence            11112233344 35557888999999999999999999999999999999999999999999999999999999876543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.81  E-value=0.00031  Score=58.28  Aligned_cols=69  Identities=10%  Similarity=0.214  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          311 GIIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       311 g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      .+++..+++.++.+++|+.+.+.+=.+ .-+..+.+.+.+++++||++|+.+++|+.++++|++.+....
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344567789999999999988665444 567888899999999999999999999999999999875543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.63  E-value=0.0015  Score=55.92  Aligned_cols=130  Identities=22%  Similarity=0.226  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHH
Q 039506          241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNY  319 (424)
Q Consensus       241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~  319 (424)
                      .+++++++++-++...++.++.++..+|+...+..+..+.+.+.......++.  .++ .....|+  .++|.+.+....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHHH
Confidence            57889999999999999999988887678999999999998888888777643  222 1222232  233545566677


Q ss_pred             HHHHHHhhccChhhHh-hhcchhHHHHHHHHHH-H---cCCCcchhhHHHHHHHHHhhhe
Q 039506          320 GLITWSNKILGPALVA-LYNPLQPAASAFLSKI-F---LGSPIYLGSVLGGCLIIAGLYM  374 (424)
Q Consensus       320 ~l~~~a~~~~~~~~~s-~~~~~~pi~~~l~~~l-~---~~e~~~~~~~lG~~lii~g~~l  374 (424)
                      .+....+++.+++... ....-+.+.+.+++.+ .   -+.++++.+++|..++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7788888999886654 4556678888888886 2   3467899999999999999864

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.60  E-value=0.0015  Score=63.52  Aligned_cols=137  Identities=13%  Similarity=0.161  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-hcCCChHHHHHHHHHHHHHHHHHHHHh--hccccc----CcCCHHHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVAL-NVGVNQLVFCVFRDLLALSILAPIAYF--REKRTR----LPMTRRLLMSFFFLGL  122 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~--~~~~~~----~~~~~~~~~~~l~~g~  122 (424)
                      .|+++++++.++-|...+..+... +++.++.+.+++-...+.++.++....  .+....    ....+..+..++...+
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            399999999999999999999877 456889999999999998888877766  322110    0112334455566666


Q ss_pred             HHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          123 TGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       123 lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      + ...+..+.+.-.+..++...+++..+--+++.+++.++++++++..+      |+|+++.+.|..+-..
T Consensus       234 ~-~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~------~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 T-GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ------WIGIVLVFAGIFLYSY  297 (303)
T ss_pred             H-HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH------HHHHHHhHHHHHHHHH
Confidence            6 46666677778899999999999999999999999999999999999      9999999999988874

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.48  E-value=0.00056  Score=55.99  Aligned_cols=67  Identities=19%  Similarity=0.292  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          312 IIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       312 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      +++..+++.++..++|+.+.+.+=.+ .-+..+.+.+.++++++|++++.+++|+.++++|++.....
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44567788889999999988665444 56788888999999999999999999999999999988543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.47  E-value=0.0012  Score=63.95  Aligned_cols=121  Identities=21%  Similarity=0.227  Sum_probs=89.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHH
Q 039506          236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIAS  315 (424)
Q Consensus       236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  315 (424)
                      .+..|.+++++++++.+...++.|+...+.+. -..-.-.        -..        ..+  ....|+.    |.+..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~--------~~~--------~~l--~~~~W~~----G~~~~   60 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS--------GGR--------SYL--RRPLWWI----GLLLM   60 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc--------hhh--------HHH--hhHHHHH----HHHHH
Confidence            56799999999999999999999987666552 0000000        000        000  1222332    22233


Q ss_pred             HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      .++..+.+.|+...|++.++++..+..++..+++..++||+++...++|++++++|..+.....
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            4566677789999999999999999999999999999999999999999999999998876544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.41  E-value=0.057  Score=52.49  Aligned_cols=300  Identities=15%  Similarity=0.084  Sum_probs=172.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-----cccCcCCHHHHHHHHH
Q 039506           45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK-----RTRLPMTRRLLMSFFF  119 (424)
Q Consensus        45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-----~~~~~~~~~~~~~~l~  119 (424)
                      +.....|+++..++.++-+...+-.|..-+  .+ ++..+.-..+-..+.+|+....-.     ......+...+....+
T Consensus         2 ~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~--Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l   78 (344)
T PF06379_consen    2 NSAIILGIIFHAIGGFASGSFYVPFKKVKG--WS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFL   78 (344)
T ss_pred             CchHHHHHHHHHHHHHHhhhhccchhhcCC--cc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence            445678999999999999999888887643  33 333333333333444444332111     1111224455666677


Q ss_pred             HHHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccc-cccccccchhhHHHHHHHhHhhhhhccCC
Q 039506          120 LGLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVN-LLTTEGQAKVGGTFICVSGAILMVLFRGP  197 (424)
Q Consensus       120 ~g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~-~~~~~~~~~~~g~~l~i~Gv~li~~~~~~  197 (424)
                      .|++ -..+...|-.+++|+..+...-| ..+..++-.++-.++.++--. ..+..++.-++|++++++|+.++......
T Consensus        79 ~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   79 FGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence            8888 78888999999999999988655 577777877777776543210 11233555699999999999999742111


Q ss_pred             cccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--------cCCCcc
Q 039506          198 ALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--------KYPSSL  269 (424)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--------~~~~~~  269 (424)
                      .-.+.++           +.               ...+...|.+.+++|+++.|.+++-...-..        ..+ |+
T Consensus       158 Ke~~~~~-----------~~---------------~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~-~l  210 (344)
T PF06379_consen  158 KEKELGE-----------EA---------------KEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVN-PL  210 (344)
T ss_pred             hhhhhcc-----------ch---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCC-cH
Confidence            0000000           00               1126679999999999999998876542110        111 11


Q ss_pred             hh----HHHHHHHHHHHHHHHHHHhcC--C-C---ccccc--c--hhHHHHHHHHHHHHHHHHHHHHHHHhhccC----h
Q 039506          270 SV----TAYSYFFGAVLMVITAFFLTN--D-S---TEWSL--T--QSELFAVIYAGIIASAVNYGLITWSNKILG----P  331 (424)
Q Consensus       270 ~~----~~~~~~~~~~~l~~~~~~~~~--~-~---~~~~~--~--~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~----~  331 (424)
                      ..    ....+..+.+.-....++...  . .   .+...  +  ...+...+..|++ =...++.|..+-.+.+    .
T Consensus       211 ~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~  289 (344)
T PF06379_consen  211 YANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPF  289 (344)
T ss_pred             HHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCcccc
Confidence            11    112222333333333333211  1 1   12211  1  1333333334443 3445556666655555    4


Q ss_pred             hhHhhhcchhHHHHHHHHHHHcCCC------cchhhHHHHHHHHHhhheeee
Q 039506          332 ALVALYNPLQPAASAFLSKIFLGSP------IYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       332 ~~~s~~~~~~pi~~~l~~~l~~~e~------~~~~~~lG~~lii~g~~l~~~  377 (424)
                      .--.+.+.+..+++-+++++ ++|.      .-..-++|+++++++++++-+
T Consensus       290 ~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  290 SSWAIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            56677888889999999965 5553      224457899998888876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.34  E-value=0.0033  Score=53.97  Aligned_cols=137  Identities=20%  Similarity=0.218  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCccccc-chhHHHHHHHHHHHHHH
Q 039506          238 HLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSL-TQSELFAVIYAGIIASA  316 (424)
Q Consensus       238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~  316 (424)
                      ....+++++++++-.+...++.++.+..++|+...+..+..+++.+..+.+..+ .+..+.. ....|+.  ++|.+.+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~--~~GG~lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWA--WIGGLLGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHH--HHccchhh
Confidence            356788999999999999999999988887888999999999988888777744 3333332 2222222  22223333


Q ss_pred             HHHHHHHHHhhccCh-hhHhhhcchhHHHHHHHHHHHcC----CCcchhhHHHHHHHHHhhheeee
Q 039506          317 VNYGLITWSNKILGP-ALVALYNPLQPAASAFLSKIFLG----SPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       317 ~~~~l~~~a~~~~~~-~~~s~~~~~~pi~~~l~~~l~~~----e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +-...-....++.++ .....+..-+.+.+++++.+=+.    .+++...++|++++++|+++...
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            333444555666655 56667778888888988876443    56799999999999999665543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.26  E-value=0.003  Score=51.56  Aligned_cols=64  Identities=13%  Similarity=0.066  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506          122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM  191 (424)
Q Consensus       122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li  191 (424)
                      ..+...++.+...++++.|.+.+-.+. ..-.+.+.+.+++++||+++..+      ++|+.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            333788999999999999999998774 68899999999999999999999      99999999999886

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.23  E-value=0.001  Score=55.20  Aligned_cols=67  Identities=19%  Similarity=0.188  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      .+.+...+++++..++++.|.+.+..+. .+.-+.+.++++++++|+++..+      ++|+.+.++|++++-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            3444788999999999999999998885 69999999999999999999999      9999999999988863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.19  E-value=0.0013  Score=53.77  Aligned_cols=67  Identities=21%  Similarity=0.212  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      .+.+...++.++..++++.|.+.+..+ ..+.-+.+.+++++++||+++..+      ++|+.+.++|++++-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            344478899999999999999999888 468999999999999999999999      9999999999999963

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.18  E-value=0.0066  Score=51.89  Aligned_cols=130  Identities=12%  Similarity=0.054  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           52 HGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      +++.+++..+.+.+..+.-.+.++ .+ |...+++.+..+++.+..+....+++.....+... ++...-|++| .....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p-~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVP-WWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC-hHHhccHHHH-HHHHH
Confidence            456677777778888887777775 65 99999999999999998888777664222222222 3344477775 77778


Q ss_pred             HHHHHhhccCcchhhhccc-chHHHHHHHHHH----HhhcccccccccccchhhHHHHHHHhHhh
Q 039506          131 LFLLGLSYTNPTYAAAIQP-SIPVFTFLLAVM----MGTERVNLLTTEGQAKVGGTFICVSGAIL  190 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~~-l~Pi~~~lla~l----~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l  190 (424)
                      +.....+..+++.+..+.- -+-+...++..+    .-+++++..+      ++|+++.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            8888899999998887754 444444555553    3468888888      9999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.17  E-value=0.0016  Score=52.33  Aligned_cols=65  Identities=18%  Similarity=0.314  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHhhccChh-hHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          314 ASAVNYGLITWSNKILGPA-LVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       314 ~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      +..++|.+...++|+.+.. ..++..-.-.+.+.+.++++|+|+.++.+++|+.++++|++.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            4567889999999998874 4577777888889999999999999999999999999999977543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.16  E-value=0.001  Score=53.52  Aligned_cols=65  Identities=25%  Similarity=0.160  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          122 LTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       122 ~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      +.+...++.+...|+++.|.+.+..+ ...-.+.+.+.++++++|+++..+      ++++.+.+.|++.+-
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk  102 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence            33378899999999999999999877 578999999999999999999999      999999999999885

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.14  E-value=0.0027  Score=51.50  Aligned_cols=66  Identities=23%  Similarity=0.371  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHhhccChh-hHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506          312 IIASAVNYGLITWSNKILGPA-LVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW  377 (424)
Q Consensus       312 ~~~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~  377 (424)
                      +++..+++.+...++|+.|.. ..++..-+-.+.+.+.+++++||++++.+++|+.++++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            345677889999999999874 456666688889999999999999999999999999999998753

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.11  E-value=0.0073  Score=49.25  Aligned_cols=64  Identities=20%  Similarity=0.282  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHhhccChhh-HhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506          313 IASAVNYGLITWSNKILGPAL-VALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT  376 (424)
Q Consensus       313 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~  376 (424)
                      ++..+++.+...++|++|... .++..-+-.+.+.+.+++++||++++.+++|+.++++|++...
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            345778899999999998754 5666667788889999999999999999999999999998753

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.11  E-value=0.0045  Score=60.24  Aligned_cols=145  Identities=17%  Similarity=0.160  Sum_probs=110.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhcc---cccCcCCHHHHHHH
Q 039506           44 MEREVLRAHGAMALVQLFYGGYHVITKVALNVG---VNQLVFCVFRDLLALSILAPIAYFREK---RTRLPMTRRLLMSF  117 (424)
Q Consensus        44 ~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~  117 (424)
                      ...+...|-++.+++++++|.+.++.|.-.+.+   ++-..+.-+--++..++++|..+.-..   ....-++..+....
T Consensus       241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v  320 (416)
T KOG2765|consen  241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLV  320 (416)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence            334568999999999999999999999876432   443333333344556666654443222   11112234455567


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506          118 FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLF  194 (424)
Q Consensus       118 l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~  194 (424)
                      +..+..|.+++.++|..|.-.+++-.+++-..++.-..++.-.++.+.++++..      ++|.+..+.|-+++...
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence            788899999999999999999999999999998888899999999999999999      99999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.09  E-value=0.0018  Score=52.47  Aligned_cols=65  Identities=14%  Similarity=0.032  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      +.+...++++...++++.|.+.+-.+. ..-.+.+.+.+++++||++++.+      ++|+.+.+.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            444788999999999999999998775 59999999999999999999999      999999999999884

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.87  E-value=0.0028  Score=51.85  Aligned_cols=110  Identities=19%  Similarity=0.249  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039506           56 ALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLG  135 (424)
Q Consensus        56 l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~a  135 (424)
                      ++..++||...++.|...+. .++..-.. |..-....     ..        .+++...     ..+-+-.+...|+..
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll--------~n~~y~i-----pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LL--------LNPKYII-----PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HH--------HhHHHHH-----HHHHHHHHHHHHHHH
Confidence            45678999999999998763 44333221 32111111     00        0222211     222245566888999


Q ss_pred             hhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506          136 LSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM  191 (424)
Q Consensus       136 l~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li  191 (424)
                      +...+.+.+..+ +++.=++|++.++++.+|..+++.      ++|+++.+.|+.++
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            999999999998 589999999999998888888888      99999999998765

Many members are annotated as potential transmembrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.83  E-value=0.051  Score=53.53  Aligned_cols=144  Identities=11%  Similarity=0.120  Sum_probs=91.3

Q ss_pred             hHHHHHHHHHHHHHHHHHH-------HHHHHHhhcCCChHHHHHHHHH---HHHHHHH-HHHHh---hcccc----cCcC
Q 039506           48 VLRAHGAMALVQLFYGGYH-------VITKVALNVGVNQLVFCVFRDL---LALSILA-PIAYF---REKRT----RLPM  109 (424)
Q Consensus        48 ~~~~~~~~l~a~~~~~~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~l~l~-~~~~~---~~~~~----~~~~  109 (424)
                      ..+++..++++.+..++..       +..+...+.|.++.....-.+.   .+..+.- +++.+   ++++.    .+..
T Consensus       172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~  251 (345)
T PRK13499        172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL  251 (345)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence            4578889999999988888       6666554456777666555554   3333332 22232   21211    1111


Q ss_pred             C----HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhh---cc-cchHHHHHHHHHHHhhcccccccccccchhhHH
Q 039506          110 T----RRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAA---IQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGT  181 (424)
Q Consensus       110 ~----~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~i---i~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~  181 (424)
                      +    .+......+.|++ ....+.++..|-+..+.+.+..   +. .+..++..+-+. ++||+=+..+++.+.-++|+
T Consensus       252 ~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~  329 (345)
T PRK13499        252 AKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGC  329 (345)
T ss_pred             cchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHH
Confidence            2    2333333666666 6788888888888886665554   55 566677777777 58998764444566668999


Q ss_pred             HHHHHhHhhhhh
Q 039506          182 FICVSGAILMVL  193 (424)
Q Consensus       182 ~l~i~Gv~li~~  193 (424)
                      ++.++|++++..
T Consensus       330 vliI~g~~lig~  341 (345)
T PRK13499        330 VVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHhh
Confidence            999999988864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.70  E-value=0.011  Score=55.55  Aligned_cols=80  Identities=16%  Similarity=0.195  Sum_probs=68.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506          302 SELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       302 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~  381 (424)
                      +....+..=++ ...+...+.+.++++.+++...++..+..+++.++++++++.+.+..||++..+.++|+.+.......
T Consensus        15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34444444444 35667788999999999999999999999999999999999999999999999999999998876554


Q ss_pred             c
Q 039506          382 E  382 (424)
Q Consensus       382 ~  382 (424)
                      .
T Consensus        94 ~   94 (244)
T PF04142_consen   94 S   94 (244)
T ss_pred             c
Confidence            4

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.69  E-value=0.013  Score=46.42  Aligned_cols=55  Identities=20%  Similarity=0.324  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHhhccChhhH-hhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHH
Q 039506          314 ASAVNYGLITWSNKILGPALV-ALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLI  368 (424)
Q Consensus       314 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~li  368 (424)
                      +..+++.++.+++|+.+.+.+ ++..-+..+.+.+.+.+++||++|+.+++|+.+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            567788999999999998877 5556688999999999999999999999999885

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.64  E-value=0.0054  Score=57.71  Aligned_cols=135  Identities=10%  Similarity=0.021  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHH
Q 039506          240 GVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNY  319 (424)
Q Consensus       240 G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  319 (424)
                      |.+.+++|+++++...+=.|+.... | ++...++++....+...+..+..+ .+..++       + ..+|...=+.+.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g-D-g~~fQw~~~~~i~~~g~~v~~~~~-~p~f~p-------~-amlgG~lW~~gN   69 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG-D-GFFFQWVMCSGIFLVGLVVNLILG-FPPFYP-------W-AMLGGALWATGN   69 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC-C-cHHHHHHHHHHHHHHHHHHHHhcC-CCccee-------H-HHhhhhhhhcCc
Confidence            4678899999999999988876533 4 567777777666655555555443 111111       1 111211223344


Q ss_pred             HHHHHHhhccChhhHhhh-cchhHHHHHHHHHH-HcCCCc-----chhhHHHHHHHHHhhheeeeecccccCC
Q 039506          320 GLITWSNKILGPALVALY-NPLQPAASAFLSKI-FLGSPI-----YLGSVLGGCLIIAGLYMVTWVSYRERQA  385 (424)
Q Consensus       320 ~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l-~~~e~~-----~~~~~lG~~lii~g~~l~~~~~~~~~~~  385 (424)
                      .+-.-.+|.++-+..-++ ...+.+.+...+-+ +||+.+     ++..++|++++++|..+....|.+.+++
T Consensus        70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~  142 (254)
T PF07857_consen   70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEP  142 (254)
T ss_pred             eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence            445555666665544433 33355666666543 455433     5678899999999999988776655433

The region concerned is approximately 280 residues long.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.63  E-value=0.0058  Score=59.34  Aligned_cols=139  Identities=14%  Similarity=0.151  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHh---hcCCChHHHHHHHHHHHHHHHH-HHHHhhccccc-----CcCCHHHHHHH
Q 039506           47 EVLRAHGAMALVQLFYGGYHVITKVAL---NVGVNQLVFCVFRDLLALSILA-PIAYFREKRTR-----LPMTRRLLMSF  117 (424)
Q Consensus        47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~---~~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~  117 (424)
                      -++.|....+.+.+..+...++.|...   +..+++.....+..-++.++++ |+.........     ...+... ..+
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LIL  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHH
Confidence            357899999999999999999999988   3358899988888888888888 87665443222     1223333 333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          118 FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       118 l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      +...++ ..+.+...+..+.+++|-..++....--+++...++++++++++..+      ..|.+++++|+.+-..
T Consensus       239 ~~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  239 LLNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHH
Confidence            444466 67778888999999999999999888888888899999999999999      9999999999998864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.50  E-value=0.0021  Score=59.09  Aligned_cols=133  Identities=11%  Similarity=0.106  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHH
Q 039506          240 GVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNY  319 (424)
Q Consensus       240 G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  319 (424)
                      ..+++|+=++.|+..-.+..|...+   |.+.+.-+.+.+.++.+...++..     ...+...+..-+..|++- .+++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~~~-----p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLFVS-----PELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHheeec-----CccchhhHHHHHHhhhHh-hhhh
Confidence            4578889999999887776665333   455555555555555444444422     112355566656666654 4588


Q ss_pred             HHHHHHhhccChhhHhhhcc-hhHHHHHHHHHHHcCCCcchhhH----HHHHHHHHhhheeeeeccc
Q 039506          320 GLITWSNKILGPALVALYNP-LQPAASAFLSKIFLGSPIYLGSV----LGGCLIIAGLYMVTWVSYR  381 (424)
Q Consensus       320 ~l~~~a~~~~~~~~~s~~~~-~~pi~~~l~~~l~~~e~~~~~~~----lG~~lii~g~~l~~~~~~~  381 (424)
                      ...+++++..+.+++.++.. ++-+-+.+++++.|||..+..+.    +.+++++.|+++..+.++.
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            89999999999999998876 56677789999999999987765    4677888999888776553

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.33  E-value=0.024  Score=46.38  Aligned_cols=109  Identities=13%  Similarity=0.010  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039506          246 GNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWS  325 (424)
Q Consensus       246 ~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a  325 (424)
                      +-+++|++.+-+.|+..+..++.-.. . +..-....     ++.         +++   .++  .......+-..|++.
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~---------n~~---y~i--pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL---------NPK---YII--PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH---------hHH---HHH--HHHHHHHHHHHHHHH
Confidence            45789999999999988877632222 1 21111111     110         111   111  222344566778899


Q ss_pred             hhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhee
Q 039506          326 NKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMV  375 (424)
Q Consensus       326 ~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~  375 (424)
                      +.+.+-+.+.++ +.+.-+++.+.++++.+|..+...++|+++++.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999999888 58999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.13  E-value=0.013  Score=46.51  Aligned_cols=56  Identities=20%  Similarity=0.004  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHH
Q 039506          122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFI  183 (424)
Q Consensus       122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l  183 (424)
                      +.+...++.++..++++.|.+.+-.+. .+..+.+.+.+.+++||+++..+      +.|+.+
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            334788999999999999999997775 69999999999999999999999      988765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.93  E-value=0.1  Score=49.15  Aligned_cols=200  Identities=10%  Similarity=0.001  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506           51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL  130 (424)
Q Consensus        51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~  130 (424)
                      |+++.+++++++|.+++-.|..-.  -|++.+-++.+....+.-+++...++.       .+..++.++.|.+ .+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~f~p~amlgG~l-W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILGF-------PPFYPWAMLGGAL-WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcCC-------CcceeHHHhhhhh-hhcCce
Confidence            467789999999999999997643  467666666666655555555554332       1223455666677 788888


Q ss_pred             HHHHHhhccCcchhhhcccchHHHH-HHHHHH-HhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCC-
Q 039506          131 LFLLGLSYTNPTYAAAIQPSIPVFT-FLLAVM-MGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDF-  207 (424)
Q Consensus       131 ~~~~al~~~~~~~a~ii~~l~Pi~~-~lla~l-~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~-  207 (424)
                      +-.-.++..+.+....+..+.-+++ -.-+++ +++++..... -....++|++++++|..+...-+.+......+.+. 
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            9999999999999999877643333 333332 3333221110 00112788888888888776544433111111100 


Q ss_pred             ccc----cccccCC-CCCCcccccccccccC-chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 039506          208 VGE----NEVRVRG-QPEPVGWLLSNFIDIG-LDQWHLGVLCLIGNCMCMAAFIAIQAPILRKY  265 (424)
Q Consensus       208 ~~~----~~~~~~~-~p~~~~~~~~~~~~~~-~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~  265 (424)
                      ...    .+.+++. ..++-.|-    -+++ ..+...|..+++++++.|+...+=.....++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~v----d~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWV----DELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccc----cccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            000    1111110 00000110    0000 12467899999999999999887777665553

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.66  E-value=0.12  Score=49.18  Aligned_cols=141  Identities=11%  Similarity=0.086  Sum_probs=113.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccccc----CcCCHHHHHHHHHH
Q 039506           46 REVLRAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSILAPIAYFREKRTR----LPMTRRLLMSFFFL  120 (424)
Q Consensus        46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~l~~  120 (424)
                      .+...|+.++....++=|..+..-..+.+ .++++..+++.-.++.++.-.......+....    ....+..++.+++.
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            45678999999999888888887776664 46889999999888888877776554433211    12356667788888


Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      +.+| +.++.+.+.-++.-++-.-+.|..+--++..+++.+.++.+++..|      |.|+.+.+.|+.+=.+
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHH
Confidence            9885 8888888889999888888889999999999999999999999999      9999999999877654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.34  E-value=0.26  Score=42.39  Aligned_cols=136  Identities=13%  Similarity=0.025  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ...++..+.+..+-..+..+.-.+.+.--+|....+.-+..+.+++..+.+.+.+.......++.-++...-|++| +.+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            4566677777777788887777777652348888999999998888888777444322222233334455556664 444


Q ss_pred             HHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHH-h---hcccccccccccchhhHHHHHHHhHhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMM-G---TERVNLLTTEGQAKVGGTFICVSGAILM  191 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~-l---~e~~~~~~~~~~~~~~g~~l~i~Gv~li  191 (424)
                      -..-........++....+ ..-+-+...++..+= +   +++++..+      ++|+++.++|+.++
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~  144 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLA  144 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHh
Confidence            4444555555555555444 344444444444431 1   36677777      99999999995554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.07  E-value=0.013  Score=56.06  Aligned_cols=126  Identities=16%  Similarity=0.203  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHH
Q 039506          236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIAS  315 (424)
Q Consensus       236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  315 (424)
                      .+..|.++++.+.+..+...++.|+-.++...    ..              .-.++++...- ....|+    .|.+..
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~--------------~ra~~gg~~yl-~~~~Ww----~G~ltm   74 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG--------------LRAGEGGYGYL-KEPLWW----AGMLTM   74 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc--------------ccccCCCcchh-hhHHHH----HHHHHH
Confidence            45689999999999999999888887665431    00              00011111111 112232    355556


Q ss_pred             HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccccC
Q 039506          316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ  384 (424)
Q Consensus       316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~~~  384 (424)
                      .++-.+.+.|....+++.++++..++.+.+.+++..+++|+++....+|+++.++|..++.....++++
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~  143 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE  143 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence            667777777888899999999999999999999999999999999999999999999988875544443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.12  E-value=0.063  Score=47.87  Aligned_cols=63  Identities=19%  Similarity=0.172  Sum_probs=58.2

Q ss_pred             HHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506          318 NYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       318 ~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~  380 (424)
                      +..+|..++++++++.++.+...+..+..+++++.+++++...+++..++.+.|++++.+.+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            445689999999999999999999999999999999999999999999999999999887543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=94.05  E-value=1.8  Score=42.43  Aligned_cols=139  Identities=16%  Similarity=0.092  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCC---cchhHHHHHHHHHHHHHHHHHHhcCC---Cccccc------chhHHHH
Q 039506          239 LGVLCLIGNCMCMAAFIAIQAPILRKYPS---SLSVTAYSYFFGAVLMVITAFFLTND---STEWSL------TQSELFA  306 (424)
Q Consensus       239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~------~~~~~~~  306 (424)
                      .-.+..+...+.++......|...++.++   |.+..+..-+.-.+++....+..+..   ...-..      ++.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            44556666677777777777776555431   23444444455555555555544311   110011      1212222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          307 VIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       307 l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      +..=+. ..++-.-+++.++.+.+++...+...+....+.++..++++++.+.+||...++.+.|+.+.+..
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            222222 24445568999999999999999999999999999999999999999999999999999998843

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.92  E-value=0.72  Score=42.48  Aligned_cols=159  Identities=14%  Similarity=0.106  Sum_probs=106.7

Q ss_pred             hhhhhhheeecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHH
Q 039506           15 FGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSI   93 (424)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~   93 (424)
                      .|+-..-+-|.|-.+.+|++             ...|-++++++..+-|.........-. +.-+...+++.-.+.+.+.
T Consensus       150 ~GValFmYK~~Kv~g~e~~t-------------~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~  216 (337)
T KOG1580|consen  150 VGVALFMYKENKVGGAEDKT-------------FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLY  216 (337)
T ss_pred             HHHHHhhccccccCCCcccc-------------cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHH
Confidence            45555555555555544433             346667777777777776665443322 1123445555555555555


Q ss_pred             HHHHHHhhcccc----cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhccccc
Q 039506           94 LAPIAYFREKRT----RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNL  169 (424)
Q Consensus        94 l~~~~~~~~~~~----~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~  169 (424)
                      +-.-+.+.+.-.    .....+..|+.+...++. ..+++.+.+.-..+-+|-..+++..+--.|+++.+.++++..++.
T Consensus       217 Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~-s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~  295 (337)
T KOG1580|consen  217 LGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA-SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG  295 (337)
T ss_pred             hhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH-HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH
Confidence            544333332200    001123455667777877 477888999999999999999999999999999999999999999


Q ss_pred             ccccccchhhHHHHHHHhHhhhhh
Q 039506          170 LTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       170 ~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      +|      |.|..+.+.|..+=..
T Consensus       296 rQ------wlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  296 RQ------WLGTVLVFSALTADVV  313 (337)
T ss_pred             HH------HHHHHHHHHHhhhHhh
Confidence            99      9999999999877653

>TIGR00803 nst UDP-galactose transporter

Probab=93.78  E-value=0.22  Score=45.97  Aligned_cols=60  Identities=13%  Similarity=0.114  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhh
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAIL  190 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l  190 (424)
                      .+....+....+++.++...+....+.++++.+++.++++|+++..+      +.|..+.+.|+.+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence            45566778889999999999999999999999999999999999999      9999999888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.39  E-value=4.7  Score=38.95  Aligned_cols=134  Identities=13%  Similarity=0.104  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCcchh--HHHHHHHHHHHHHHHHHHhcCCCccccc-chhHHHHHHHHHHHHHHH
Q 039506          241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSV--TAYSYFFGAVLMVITAFFLTNDSTEWSL-TQSELFAVIYAGIIASAV  317 (424)
Q Consensus       241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~  317 (424)
                      ...++.=+++-.+-.++.|.....++-|...  ..++.+.+.+.+...-...--+..+++. ..+-|..+-.+-    ..
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf----~~   89 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF----VG   89 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH----HH
Confidence            3444444455555566677777766633344  4478887777666655432222222222 223333222111    11


Q ss_pred             HHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          318 NYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       318 ~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      ....-.+++|+++.....++....|+++.+...+++|.+++...+....++++|.......
T Consensus        90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~  150 (314)
T KOG1444|consen   90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT  150 (314)
T ss_pred             HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence            2233456789999999999999999999999999999999999999999999998876543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.01  E-value=1.8  Score=42.31  Aligned_cols=143  Identities=15%  Similarity=0.147  Sum_probs=86.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHH-HHHHHHHHHHHHHHHhcCCCccc---c-cchhHHHHHHHH
Q 039506          236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAY-SYFFGAVLMVITAFFLTNDSTEW---S-LTQSELFAVIYA  310 (424)
Q Consensus       236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~l~~~  310 (424)
                      +...|+++..+++++-+.+.+=.||. |+.+  ....+. +.+++.+ ..|.......-+..+   . .+...+......
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            56799999999999999999998885 4444  222222 2333332 233332211111111   1 134566666667


Q ss_pred             HHHHHHHHHHHHHHHhhccChhhH-hhhcchhHHHHHHHHHHHcCC-------CcchhhHHHHHHHHHhhheeeeecccc
Q 039506          311 GIIASAVNYGLITWSNKILGPALV-ALYNPLQPAASAFLSKIFLGS-------PIYLGSVLGGCLIIAGLYMVTWVSYRE  382 (424)
Q Consensus       311 g~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pi~~~l~~~l~~~e-------~~~~~~~lG~~lii~g~~l~~~~~~~~  382 (424)
                      |++- .++-..|-.++|+++.+.. ++..-+..+++.++-.++.|+       .-....++|.++.++|+.+..+....+
T Consensus        80 G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   80 GVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            7764 4466668999999987654 334445555666665555332       223467889999999999887654433


Q ss_pred             c
Q 039506          383 R  383 (424)
Q Consensus       383 ~  383 (424)
                      +
T Consensus       159 e  159 (344)
T PF06379_consen  159 E  159 (344)
T ss_pred             h
Confidence            3

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=88.74  E-value=2.3  Score=40.90  Aligned_cols=121  Identities=18%  Similarity=0.204  Sum_probs=85.5

Q ss_pred             HHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhh
Q 039506          259 APILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDST--EWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVAL  336 (424)
Q Consensus       259 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~  336 (424)
                      +...++.+-|+.++.++..+-...............+  ....++.....-+.-..+++++-..+-++++++++.+..++
T Consensus        36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM  115 (349)
T KOG1443|consen   36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTM  115 (349)
T ss_pred             hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeee
Confidence            3334445555666666665554444333333332111  11234444444344444578888899999999999999999


Q ss_pred             hcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          337 YNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       337 ~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      .-+..+++..+++.++-=|++.+.-.+=..+|-+|+++.++..
T Consensus       116 ~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  116 TKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             ccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            9999999999999998889999999998999999999888754

>PRK02237 hypothetical protein; Provisional

Probab=84.00  E-value=6.2  Score=31.84  Aligned_cols=47  Identities=15%  Similarity=0.171  Sum_probs=39.8

Q ss_pred             HhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506          334 VALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY  380 (424)
Q Consensus       334 ~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~  380 (424)
                      .+...-...+.++++.+.+=|.+|+...++|..++++|+.++.+.++
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            45566667788899999999999999999999999999988766543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=83.86  E-value=2.6  Score=39.99  Aligned_cols=65  Identities=15%  Similarity=0.140  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      |-..+-.+.+.++...+++...++.-...+++-+++.-+++.+++..+|+|+..+.+|.+.+-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            44556667788888999999999999999999999999999999999999999999999987655

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=83.83  E-value=1.4  Score=41.58  Aligned_cols=143  Identities=15%  Similarity=0.069  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhcccc----cCc-CCHHHHHHHHHH
Q 039506           47 EVLRAHGAMALVQLFYGGYHVITKVALNV-GVNQLVFCVFRDLLALSILAPIAYFREKRT----RLP-MTRRLLMSFFFL  120 (424)
Q Consensus        47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~-~~~~~~~~~l~~  120 (424)
                      -.+.|.++.+.+.+.-+.+.+.+|..... +---+.++++..+.+.++++|++...+.-.    .+. ...+.|..+.+.
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            35789999999999999999999976542 223567789999999999999988865521    112 245666677777


Q ss_pred             HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccC
Q 039506          121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRG  196 (424)
Q Consensus       121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~  196 (424)
                      |++|++.++... +=++-++|-.--+--..-...-.+++..+++|.-+...      |-+-++.+.|...-++-++
T Consensus       262 glfgF~mgyvTg-~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  262 GLFGFAMGYVTG-WQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHHhhheee-EEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence            777655554322 12333433322222223344556788899999998888      9999999999888776443

>PRK02237 hypothetical protein; Provisional

Probab=83.66  E-value=8.7  Score=31.04  Aligned_cols=53  Identities=15%  Similarity=0.076  Sum_probs=40.1

Q ss_pred             Hhhc-cCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          135 GLSY-TNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       135 al~~-~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      .++- ...+.+-.-+ ....+...+-.+.+.++|+++.+      ++|..++++|+.++.+
T Consensus        51 Tl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         51 TLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY  105 (109)
T ss_pred             hcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence            3443 3344444433 46667777888999999999999      9999999999999874

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=82.77  E-value=21  Score=28.78  Aligned_cols=110  Identities=20%  Similarity=0.301  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCC------hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506           55 MALVQLFYGGYHVITKVALNVGVN------QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN  128 (424)
Q Consensus        55 ~l~a~~~~~~~~~~~k~~~~~~~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~  128 (424)
                      ++...++||....+.|.... +.+      .....++|-.-..                ..+++.+. -+.+.    -.+
T Consensus         8 lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~i-PFllN----qcg   65 (125)
T KOG4831|consen    8 LVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLI-PFLLN----QCG   65 (125)
T ss_pred             HHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHH-HHHHH----Hhh
Confidence            67788999999999998763 122      1222222221111                11222221 12223    334


Q ss_pred             HHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506          129 QLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV  192 (424)
Q Consensus       129 ~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~  192 (424)
                      ..+||.-+++.+.+.+..+. ++.-.|+.+.+..+..|....+.      +.|..+..+|+.+..
T Consensus        66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence            47788889999999999885 57888899888877555555555      899999999987764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=82.33  E-value=5.4  Score=36.62  Aligned_cols=137  Identities=15%  Similarity=0.159  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhcccccC----cCCHHHHHHHHHHHHHH
Q 039506           50 RAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSILAPIAYFREKRTRL----PMTRRLLMSFFFLGLTG  124 (424)
Q Consensus        50 ~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~l~~g~lg  124 (424)
                      .|++++..-++.-+..-...|.-.+ .+...++.+++..+.+..+++.+....+.+...    ..+.......++.|++ 
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-  233 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-  233 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-
Confidence            3555555555555555555554433 235678889999999999888877665442211    1223334456667777 


Q ss_pred             HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      -++-.++--+.++-++....+.+-.+.-.-.++.+.++++|+.++..      +.++++.+...++-.+
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            46666777788888998888998888888899999999999999999      9999998887777664

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.30  E-value=7.7  Score=31.26  Aligned_cols=55  Identities=20%  Similarity=0.207  Sum_probs=42.7

Q ss_pred             HHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          133 LLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       133 ~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      ...++-.+.+.+-.-+ ....+...+-.+.+.++|+++.+      ++|..++++|+.++.+
T Consensus        48 l~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~  103 (107)
T PF02694_consen   48 LLTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF  103 (107)
T ss_pred             HhhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence            3345555555554443 57777888888999999999999      9999999999999974

; GO: 0016020 membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	424
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 44/294 (14%), Positives = 78/294 (26%), Gaps = 92/294 (31%)

Query: 180 GTFICVSGAILMVLFRGPALFGCGNEDFVGE---NEVRVRGQPEPVGWL-LSNFIDIGLD 235
              + + G   +         G G      +   +          + WL L N       
Sbjct: 150 AKNVLIDG---V--------LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 236 QWHLGVLCLIGNCMCMAAFIAIQAPIL---------------RKYPSSL-------SVTA 273
              L  L    +    +         L               + Y + L       +  A
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 274 YSYF-FGAVLMVIT-----AFFLTNDST--------EWSLTQSE---LFA---------- 306
           ++ F     +++ T       FL+  +T          +LT  E   L            
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 307 ----------VIYAGIIASAVNYGLITWSN------KILGPALVALYNPLQPAASAFLSK 350
                      +   IIA ++  GL TW N        L   + +  N L+PA      K
Sbjct: 319 PREVLTTNPRRL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE---YRK 373

Query: 351 IFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKD 404
           +F    ++  S      I   L  + W     +    V+   + +    L+ K 
Sbjct: 374 MFDRLSVFPPSA----HIPTILLSLIW-FDVIKSDVMVVVNKLHK--YSLVEKQ 420

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	424
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.84
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.59
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.38
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.3

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.84  E-value=2.1e-09  Score=90.47  Aligned_cols=71  Identities=20%  Similarity=0.282  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506          309 YAGIIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS  379 (424)
Q Consensus       309 ~~g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~  379 (424)
                      .++++++++++.++.+++++.+++.+..+ ..+.|+++++++++++||++++.+++|+++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35677889999999999999999999998 899999999999999999999999999999999999887543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.59  E-value=5.4e-07  Score=72.90  Aligned_cols=70  Identities=19%  Similarity=0.275  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506          309 YAGIIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV  378 (424)
Q Consensus       309 ~~g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~  378 (424)
                      ..++++..+++.++.+++|+.+.+.+..+ ..+.|+.+.+++++++||++++.+++|+.++++|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35566778899999999999999999888 89999999999999999999999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.38  E-value=3.4e-06  Score=68.18  Aligned_cols=69  Identities=20%  Similarity=0.190  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506          119 FLGLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL  193 (424)
Q Consensus       119 ~~g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~  193 (424)
                      ..+.++..+++.++..++++.|.+.+..+ ..+.|+++.+++++++||+++..+      ++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            45566688999999999999999999998 799999999999999999999999      9999999999999864

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.30  E-value=7.3e-07  Score=74.83  Aligned_cols=70  Identities=20%  Similarity=0.197  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506          119 FLGLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLF  194 (424)
Q Consensus       119 ~~g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~  194 (424)
                      +.++++..++++++..++++.|++.+..+ .++.|+++.++++++++|+++..+      ++|+++.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            45666689999999999999999999999 799999999999999999999999      99999999999999753

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00