Citrus Sinensis ID: 039538

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MSTSAYIRHTCPLASFACIPRSKAFSFQLRVSTHPPLHSSHCKLHRRRPPPMSSDHAGTNFPANKLEPIQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEcccEEEccccHHHHHHHcccccccccccccccccccccEEEEEEEEEccccccHHHHccccHHHHHHHcccEEEEEEEccccccccccccEEEEEccccHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHHHHHHccHHHHHccccccccccccccHHHHHHHcccccccccccHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccEEEEcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHcccccEEEEEccccccHHHHHHHcccccccEEEEEcccEEEccccHHHHHHccccccccHHHHEEccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHEEEEEEcccccccccccccEEEEEEccHHHHHHHHccccHHHHHHHHccccccEEEccccccHHHHHHHHHHHHHHHcHHHHHHHHcccEccccccHHHHHHHHcccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
mstsayirhtcplasfaciprskafsfqlrvsthpplhsshcklhrrrpppmssdhagtnfpanklepiqlndesdfyqitspdglisisgfgsllsensarstfpnLINFRVAKLHGFRRVFAHVApiffergiakpktkeisslsvepcegqTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEfrflavspetldgkpftnravlcarssdeEFFQIRCkgskeiyfhhygrynidkiwrddilpcRVYLRHCVLAAKNLgdeaynnfldhtslgdcKTTIREYLATtgagimeeeppeslktrygg
Flexible Loop (DISEMBL)
mstsayirhtcplASFACIPRSKAFSFQLRVSthpplhsshcklhrrrpppMSSDHAGTNFPANKLEPIQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTkeisslsvepcegqtliVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAvspetldgkpftnRAVLCARSSDEEFFQIRCKGskeiyfhhyGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLdhtslgdckTTIREYLATtgagimeeeppeslktrygg
Low Complexity Region (SEG)
MSTSAYIRHTCPLASFACIPRSKAFSFQLRVSTHPPLHSSHCKLHRRRPPPMSSDHAGTNFPANKLEPIQLNDESDFYQITSPDglisisgfgsllsENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG
Disordered region (IsUnstruct)
*****YIRHTCPLASFACIPRSKAFSFQLRV********************************************DFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAG****************
Disordered Region (DISOPRED)
***********PL**FACIPRSKAFS***********************************************ESDFYQITSPDGLISISGFGSLLSENSA*STFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIM**************
Disordered Region (DISEMBL)
MSTSAYIRHTCPLASFACIPRSKAFSFQLRVSTH*********************HAGTNFPANKLEPIQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEE***********
Disordered Region (DISPRO)
***SAYIRHTCPLASFACIPRSKAFSFQLRVSTHPP**************************A**LEPIQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTSAYIRHTCPLASFACIPRSKAFSFQLRVSTHPPLHSSHCKLHRRRPPPMSSDHAGTNFPANKLEPIQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
297804606	297	hypothetical protein ARALYDRAFT_493280 [	0.749	0.784	0.765	1e-105
145340274	289	uncharacterized protein [Arabidopsis tha	0.749	0.806	0.769	1e-105
225431812	248	PREDICTED: uncharacterized protein LOC10	0.749	0.939	0.776	1e-105
363806706	283	uncharacterized protein LOC100781602 [Gl	0.852	0.936	0.673	1e-102
449464742	306	PREDICTED: uncharacterized protein LOC10	0.864	0.879	0.665	1e-101
224110318	245	predicted protein [Populus trichocarpa]	0.755	0.959	0.765	1e-101
225431810	308	PREDICTED: uncharacterized protein LOC10	0.765	0.772	0.726	3e-99
115463405	308	Os05g0358400 [Oryza sativa Japonica Grou	0.803	0.811	0.671	9e-99
218196630	251	hypothetical protein OsI_19621 [Oryza sa	0.787	0.976	0.681	2e-98
357129373	309	PREDICTED: uncharacterized protein LOC10	0.839	0.844	0.672	5e-98

>gi|297804606|ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata] gi|297316023|gb|EFH46446.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/243 (76%), Positives = 211/243 (86%), Gaps = 10/243 (4%)

Query: 69  IQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAP 128
           ++L DESDF ++ S D  ISI+GFGSLLSE SARSTFP+L NFR+AKL GFRRVFAH AP
Sbjct: 65  LELEDESDFEKLLSSDNRISIAGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 124

Query: 129 IFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEF 188
           IFFE GIA P+TKEISSLSVEPCEG++L+VTVFEIK           + IPAFI+RE EF
Sbjct: 125 IFFELGIANPETKEISSLSVEPCEGESLVVTVFEIKS----------SEIPAFIQRELEF 174

Query: 189 RFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDIL 248
           RFLAV PET++GKP+TN AVLC R SDEEFFQIRCKG+KEIYF HYGR+NI+KIWRDDIL
Sbjct: 175 RFLAVVPETMEGKPYTNSAVLCGRYSDEEFFQIRCKGNKEIYFQHYGRFNIEKIWRDDIL 234

Query: 249 PCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTR 308
           PCR+YLRHCVLAAKNLGDEAYNNFLDHT LGD KTTIREYL++TG+GIMEEEPPE+LK+R
Sbjct: 235 PCRLYLRHCVLAAKNLGDEAYNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSR 294

Query: 309 YGG 311
           YGG
Sbjct: 295 YGG 297

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145340274|ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana] gi|332658287|gb|AEE83687.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/243 (76%), Positives = 209/243 (86%), Gaps = 10/243 (4%)

Query: 69  IQLNDESDFYQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAP 128
           ++L DESDF ++ S D  ISI+GFGSLLSE SARSTFP+L NFR+AKL GFRRVFAH AP
Sbjct: 57  MELEDESDFEKLLSSDNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 116

Query: 129 IFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEF 188
           IFFERGIA P+TKEISSLSVEPCEG++L+VTVFEIK           + IPAFI RE EF
Sbjct: 117 IFFERGIANPETKEISSLSVEPCEGESLVVTVFEIKS----------SEIPAFIGRELEF 166

Query: 189 RFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDIL 248
           RFLAV PETL+GKP+TN AVLC R SDEEFFQIRCKG+K IYF HYGR+ IDKIWRDDIL
Sbjct: 167 RFLAVVPETLEGKPYTNSAVLCGRYSDEEFFQIRCKGNKGIYFQHYGRFKIDKIWRDDIL 226

Query: 249 PCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTR 308
           PCR+YLRHCVLAAKNLGDEAYNNFLDHT LGD KTTIREYL++TG+GIMEEEPPE+LK+R
Sbjct: 227 PCRLYLRHCVLAAKNLGDEAYNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSR 286

Query: 309 YGG 311
           YGG
Sbjct: 287 YGG 289

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431812|ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251759 [Vitis vinifera] gi|296083318|emb|CBI22954.3| unnamed protein product [Vitis vinifera]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/246 (77%), Positives = 210/246 (85%), Gaps = 13/246 (5%)

Query: 69  IQLNDESDFYQITSPDG---LISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAH 125
           I+L DESDF ++ SPDG   L+S+ GFGSLLSE SARSTFP+L+NFRVA+L+ FRRVFAH
Sbjct: 13  IELKDESDFEKVLSPDGGLGLLSVCGFGSLLSERSARSTFPDLMNFRVARLNSFRRVFAH 72

Query: 126 VAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKRE 185
           VAPIFFERGIAKP+T EISSLSVEPCEG+TLIVTVFEI++          + IP+FIKRE
Sbjct: 73  VAPIFFERGIAKPETMEISSLSVEPCEGETLIVTVFEIQR----------SEIPSFIKRE 122

Query: 186 HEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRD 245
           HEFRFLAV PETLDGK FT  AVLCAR SDEEFFQ RCKGSKEIYF  YGR+NI KIWRD
Sbjct: 123 HEFRFLAVFPETLDGKLFTTPAVLCARYSDEEFFQNRCKGSKEIYFQQYGRHNIHKIWRD 182

Query: 246 DILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESL 305
           D+LPCRVYLRHCVLAAKNL D AYNNFLDHT L D KTTIREYLATTG+GIMEEEPPESL
Sbjct: 183 DVLPCRVYLRHCVLAAKNLSDAAYNNFLDHTFLADRKTTIREYLATTGSGIMEEEPPESL 242

Query: 306 KTRYGG 311
           + RYGG
Sbjct: 243 RARYGG 248

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806706|ref|NP_001242012.1| uncharacterized protein LOC100781602 [Glycine max] gi|255641907|gb|ACU21222.1| unknown [Glycine max]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/294 (67%), Positives = 221/294 (75%), Gaps = 29/294 (9%)

Query: 25  FSFQLRVSTHPPLHSSHCKLHRRR-------PPPMSSDHAGTNFPANKLEPIQLNDESDF 77
           F FQL      PL S  C  H+R        P P+S     +  P       +L+DESDF
Sbjct: 12  FPFQLS-----PLASRAC--HQRATLSLSFPPLPLSKLAMSSAAPVT-----ELSDESDF 59

Query: 78  YQITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAK 137
             + SPDG ISI GFGSLLSE SARSTFP+L NFR A+L+ FRRVFAHVAP+FFERGIAK
Sbjct: 60  ESLLSPDGHISICGFGSLLSERSARSTFPDLANFRTARLNRFRRVFAHVAPVFFERGIAK 119

Query: 138 PKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPET 197
           P+T EISSLSVEPCEG+TL+VTVFEI+K          + IP FIKRE EFRFLAV PET
Sbjct: 120 PETMEISSLSVEPCEGETLVVTVFEIRK----------SEIPDFIKREVEFRFLAVLPET 169

Query: 198 LDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHC 257
           LDGK F   AVLCAR SDEEFF  RCKG+KEIYF  YGR+NIDKIWRDD+LPCRVYLRHC
Sbjct: 170 LDGKAFDFPAVLCARYSDEEFFDNRCKGNKEIYFQQYGRWNIDKIWRDDVLPCRVYLRHC 229

Query: 258 VLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG 311
           VLAAKNLG+ AYNNF+DHT L D KTTIR+YLATTG+GIMEE+PPESLK RYGG
Sbjct: 230 VLAAKNLGETAYNNFVDHTYLADRKTTIRDYLATTGSGIMEEQPPESLKHRYGG 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464742|ref|XP_004150088.1| PREDICTED: uncharacterized protein LOC101211371 [Cucumis sativus]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/287 (66%), Positives = 220/287 (76%), Gaps = 18/287 (6%)

Query: 25  FSFQLRVSTHPPLHSSHCKLHRRRPPPMSSDHAGTNFPANKLEPIQLNDESDFYQITSPD 84
           FSF +    H PL S    L R     +S  +  +N   N+ EP +L DESDF  I S  
Sbjct: 38  FSFSI---AHSPLCSGSGLLQR-----ISPINVLSNSLVNEAEPKELRDESDFEAIFSDS 89

Query: 85  GLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEIS 144
             IS+ GFGSLLSE SARSTFP+LINFRVA+L+GFRR+F +VAP+FFERGIAKP+TKEIS
Sbjct: 90  DYISVCGFGSLLSERSARSTFPDLINFRVARLNGFRRIFGNVAPVFFERGIAKPETKEIS 149

Query: 145 SLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFT 204
           SL  EPCEG+ +IVTVFEIKK          + +PAFI+RE EFRFLAV PETL GK + 
Sbjct: 150 SLCAEPCEGENIIVTVFEIKK----------SEVPAFIQREIEFRFLAVFPETLHGKAYK 199

Query: 205 NRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNL 264
             AVLC+RS+DEEFFQ+RCKG+K+I+FHHYGR+NIDKIWRDDI PCRVYLRHC+LAAKNL
Sbjct: 200 KPAVLCSRSTDEEFFQVRCKGNKDIFFHHYGRHNIDKIWRDDIFPCRVYLRHCILAAKNL 259

Query: 265 GDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG 311
           GD+AYNNFLDHT LGD  TTIREYL   G GIMEEEPPESLK RYGG
Sbjct: 260 GDKAYNNFLDHTFLGDRSTTIREYLTGYGLGIMEEEPPESLKFRYGG 306

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110318|ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|222864523|gb|EEF01654.1| predicted protein [Populus trichocarpa]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/247 (76%), Positives = 208/247 (84%), Gaps = 12/247 (4%)

Query: 67  EPIQLNDESDFYQITSPDGLIS--ISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFA 124
           EPI+L D+SDF    S        + GFGSLLSE SARSTFP+L+NFRVA+L+GFRRVFA
Sbjct: 9   EPIELRDDSDFRSFLSSSDSDLISVCGFGSLLSERSARSTFPDLLNFRVARLNGFRRVFA 68

Query: 125 HVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKR 184
           HVAPIFFERGIAKP+TKEISSLSVEPCEG+ L+VTVFEI+K          + IPAF++R
Sbjct: 69  HVAPIFFERGIAKPETKEISSLSVEPCEGEGLVVTVFEIEK----------SEIPAFMER 118

Query: 185 EHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWR 244
           E EFRFLAV PETLDGKPF   AVLCAR SDEEFFQ+RCKGSKEIYF HYGRYNI+KIWR
Sbjct: 119 ELEFRFLAVVPETLDGKPFDFPAVLCARYSDEEFFQVRCKGSKEIYFQHYGRYNINKIWR 178

Query: 245 DDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPES 304
           DDILPCR YLRHCVLAAKNL D A++NFL+HT LGD KTTIREYLATTGAGIMEEEPPES
Sbjct: 179 DDILPCRAYLRHCVLAAKNLSDAAHSNFLEHTFLGDRKTTIREYLATTGAGIMEEEPPES 238

Query: 305 LKTRYGG 311
           LKTRYGG
Sbjct: 239 LKTRYGG 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431810|ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265416 [Vitis vinifera] gi|296083319|emb|CBI22955.3| unnamed protein product [Vitis vinifera]

 Score =  367 bits (943), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 181/249 (72%), Positives = 208/249 (83%), Gaps = 11/249 (4%)

Query: 64  NKLEPIQLNDESDFYQI-TSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRV 122
           N  E  +L+DESDF ++ +S D L+SI GFGSLLSE SARSTFP+LINFRVA+L+GFRRV
Sbjct: 70  NHSELTELHDESDFERLASSNDDLLSICGFGSLLSERSARSTFPDLINFRVARLNGFRRV 129

Query: 123 FAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFI 182
           FAHV P+FFERGIAKP+T EIS LSVEPCEG++LIVTVFEI +          + IP++I
Sbjct: 130 FAHVTPVFFERGIAKPETMEISGLSVEPCEGESLIVTVFEIHR----------SEIPSYI 179

Query: 183 KREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKI 242
           KRE E+RFLAV PETLDG PFT+ AVLCAR SDEEF QIRCKGSKE++F  YGRYNI KI
Sbjct: 180 KREIEYRFLAVFPETLDGTPFTSPAVLCARYSDEEFLQIRCKGSKEMFFEQYGRYNIHKI 239

Query: 243 WRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPP 302
           WRDD+ PCRVYLRHC+LAAK+L D AYN+FLDHT L D KTTI+EYLATTG+GIMEEEPP
Sbjct: 240 WRDDVFPCRVYLRHCLLAAKSLSDAAYNDFLDHTFLADRKTTIQEYLATTGSGIMEEEPP 299

Query: 303 ESLKTRYGG 311
           ESLK RYGG
Sbjct: 300 ESLKARYGG 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463405|ref|NP_001055302.1| Os05g0358400 [Oryza sativa Japonica Group] gi|47777404|gb|AAT38038.1| unknown protein [Oryza sativa Japonica Group] gi|55167986|gb|AAV43854.1| unknown protein [Oryza sativa Japonica Group] gi|113578853|dbj|BAF17216.1| Os05g0358400 [Oryza sativa Japonica Group] gi|215701221|dbj|BAG92645.1| unnamed protein product [Oryza sativa Japonica Group] gi|215766615|dbj|BAG98677.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  366 bits (939), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 184/274 (67%), Positives = 209/274 (76%), Gaps = 24/274 (8%)

Query: 45  HRRRP-----PPMSSDHAGTNFPANKLEPIQLNDESDFYQITSP--DGLISISGFGSLLS 97
           HRR P     P  ++  +G +FP       ++N   DF  +T+P   G +S+ GFGSLLS
Sbjct: 52  HRRLPLMASSPSAAATGSGGSFP-------EMNSVDDFAAVTAPRGGGRVSVVGFGSLLS 104

Query: 98  ENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLI 157
           E SARSTFP L  FRVA L GFRRVFAH APIFFERGIA   TKE SSLSVEPCEG+ ++
Sbjct: 105 ERSARSTFPELEGFRVAALRGFRRVFAHSAPIFFERGIAIEATKEFSSLSVEPCEGELIV 164

Query: 158 VTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEE 217
           VTVFEIK+            +PAFI+REHEFRFLAV PE LDG P+ N AV+CAR SDEE
Sbjct: 165 VTVFEIKE----------DEVPAFIEREHEFRFLAVVPEGLDGVPYANPAVVCARYSDEE 214

Query: 218 FFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTS 277
           +FQ+RCKGSKEIY+  YGRYNID+IWRDDILPCR YLRHCVLAAKNLG+ AY+NFLDHT 
Sbjct: 215 YFQVRCKGSKEIYYQRYGRYNIDRIWRDDILPCRAYLRHCVLAAKNLGEPAYSNFLDHTY 274

Query: 278 LGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG 311
           LGD  TTIREYLATTGAGIMEEEPPESLK+RYGG
Sbjct: 275 LGDRTTTIREYLATTGAGIMEEEPPESLKSRYGG 308

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218196630|gb|EEC79057.1| hypothetical protein OsI_19621 [Oryza sativa Indica Group] gi|222631273|gb|EEE63405.1| hypothetical protein OsJ_18217 [Oryza sativa Japonica Group]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 205/264 (77%), Gaps = 19/264 (7%)

Query: 50  PPMSSDHAGTNFPANKLEPIQLNDESDFYQITSP--DGLISISGFGSLLSENSARSTFPN 107
           P  ++  +G +FP       ++N   DF  +T+P   G +S+ GFGSLLSE SARSTFP 
Sbjct: 5   PSAAATGSGGSFP-------EMNSVDDFAAVTAPRGGGRVSVVGFGSLLSERSARSTFPE 57

Query: 108 LINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIR 167
           L  FRVA L GFRRVFAH APIFFERGIA   TKE SSLSVEPCEG+ ++VTVFEIK+  
Sbjct: 58  LEGFRVAALRGFRRVFAHSAPIFFERGIAIEATKEFSSLSVEPCEGELIVVTVFEIKE-- 115

Query: 168 GIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSK 227
                     +PAFI+REHEFRFLAV PE LDG P+ N AV+CAR SDEE+FQ+RCKGSK
Sbjct: 116 --------DEVPAFIEREHEFRFLAVVPEGLDGVPYANPAVVCARYSDEEYFQVRCKGSK 167

Query: 228 EIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIRE 287
           EIY+  YGRYNID+IWRDDILPCR YLRHCVLAAKNLG+ AY+NFLDHT LGD  TTIRE
Sbjct: 168 EIYYQRYGRYNIDRIWRDDILPCRAYLRHCVLAAKNLGEPAYSNFLDHTYLGDRTTTIRE 227

Query: 288 YLATTGAGIMEEEPPESLKTRYGG 311
           YLATTGAGIMEEEPPESLK+RYGG
Sbjct: 228 YLATTGAGIMEEEPPESLKSRYGG 251

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357129373|ref|XP_003566337.1| PREDICTED: uncharacterized protein LOC100832854 [Brachypodium distachyon]

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 189/281 (67%), Positives = 211/281 (75%), Gaps = 20/281 (7%)

Query: 31  VSTHPPLHSSHCKLHRRRPPPMSSDHAGTNFPANKLEPIQLNDESDFYQITSPDGLISIS 90
           V + PP+  SH     R  PP +   A T   A      +L   +DF  I S DG IS+ 
Sbjct: 49  VPSQPPISRSH-----RLMPPTA---AATTSEAGSF--TELTSAADFATIASADGRISVI 98

Query: 91  GFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEP 150
           GFGSLLSE SARSTFP L  FRVA L GFRRVFAH APIFF+RGIA   TKE SSLSVE 
Sbjct: 99  GFGSLLSERSARSTFPELEGFRVAALRGFRRVFAHAAPIFFDRGIAIEATKEFSSLSVEQ 158

Query: 151 CEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLC 210
           CEG+ ++VTVFEIK+      EE    +PAFI+RE+EFRFL V PE LD  PF N AV+C
Sbjct: 159 CEGEMIVVTVFEIKE------EE----VPAFIERENEFRFLVVVPEGLDQVPFPNPAVVC 208

Query: 211 ARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLGDEAYN 270
           AR SDEE+FQ+RCKGSKEIY  HYGRYNIDKIWRDDILPCR+YLRHCVLAAKNLG+ AY+
Sbjct: 209 ARYSDEEYFQVRCKGSKEIYNQHYGRYNIDKIWRDDILPCRLYLRHCVLAAKNLGEAAYS 268

Query: 271 NFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTRYGG 311
           +FLDHT LGD KTTIREYLATTGAGIMEEEPPESLK+RYGG
Sbjct: 269 SFLDHTYLGDRKTTIREYLATTGAGIMEEEPPESLKSRYGG 309

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2129985	289	AT4G16060 "AT4G16060" [Arabido	0.749	0.806	0.728	2.1e-91

TAIR|locus:2129985 AT4G16060 "AT4G16060" [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 177/243 (72%), Positives = 198/243 (81%)

Query:    69 IQLNDESDFYQITSPDXXXXXXXXXXXXXENSARSTFPNLINFRVAKLHGFRRVFAHVAP 128
             ++L DESDF ++ S D             E SARSTFP+L NFR+AKL GFRRVFAH AP
Sbjct:    57 MELEDESDFEKLLSSDNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 116

Query:   129 IFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEF 188
             IFFERGIA P+TKEISSLSVEPCEG++L+VTVFEIK           + IPAFI RE EF
Sbjct:   117 IFFERGIANPETKEISSLSVEPCEGESLVVTVFEIKS----------SEIPAFIGRELEF 166

Query:   189 RFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNIDKIWRDDIL 248
             RFLAV PETL+GKP+TN AVLC R SDEEFFQIRCKG+K IYF HYGR+ IDKIWRDDIL
Sbjct:   167 RFLAVVPETLEGKPYTNSAVLCGRYSDEEFFQIRCKGNKGIYFQHYGRFKIDKIWRDDIL 226

Query:   249 PCRVYLRHCVLAAKNLGDEAYNNFLDHTSLGDCKTTIREYLATTGAGIMEEEPPESLKTR 308
             PCR+YLRHCVLAAKNLGDEAYNNFLDHT LGD KTTIREYL++TG+GIMEEEPPE+LK+R
Sbjct:   227 PCRLYLRHCVLAAKNLGDEAYNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSR 286

Query:   309 YGG 311
             YGG
Sbjct:   287 YGG 289


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      311       298   0.00094  115 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  220 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.43u 0.19s 24.62t   Elapsed:  00:00:01
  Total cpu time:  24.43u 0.19s 24.62t   Elapsed:  00:00:01
  Start:  Sat May 11 06:11:27 2013   End:  Sat May 11 06:11:28 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	311
cd06661	99	GGCT_like GGCT-like domains, also called AIG2-like	98.85
PF04752	178	ChaC: ChaC-like protein; InterPro: IPR006840 The C	98.7
PHA03014	163	hypothetical protein; Provisional	97.9
COG3703	190	ChaC Uncharacterized protein involved in cation tr	97.59
KOG3182	212	consensus Predicted cation transporter [Inorganic	97.31
KOG4059	193	consensus Uncharacterized conserved protein [Funct	96.64
PF06094	102	AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i	95.73
PF13772	83	AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_	92.86

>cd06661 GGCT_like GGCT-like domains, also called AIG2-like family

Probab=98.85  E-value=7.5e-09  Score=78.25  Aligned_cols=87  Identities=20%  Similarity=0.277  Sum_probs=74.5

Q ss_pred             EEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEecccc
Q 039538           89 ISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIRG  168 (311)
Q Consensus        89 I~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~~G  168 (311)
                      ||+||||++........+.....++|.+.||++.|+...                +-.++.|.++..+.|.|++|+.+  
T Consensus         1 ~F~YGsl~~~~~~~~~~~~~~~~~~a~l~g~~l~~~~~~----------------~~p~~~~~~~~~v~G~v~~i~~~--   62 (99)
T cd06661           1 LFVYGTLMDGEVLHARLGRALFLGPATLKGYRLVFGGGS----------------GYPGLVPGPGARVWGELYEVDPE--   62 (99)
T ss_pred             CEEeccCCChhHhHhhCCCCceEEEEEecCcEEEecCCC----------------ccCEEEeCCCCEEEEEEEEECHH--
Confidence            699999999999988877788999999999999999322                23467788888999999999977  


Q ss_pred             chhhhhhcchhhhhhhcc---ceeeeeecccccCCC
Q 039538          169 IKLEELCTMIPAFIKREH---EFRFLAVSPETLDGK  201 (311)
Q Consensus       169 l~~eel~~~lpafieRE~---eY~~~~V~~~~Ldg~  201 (311)
                              ++..|+++|-   .|.+..|.....+|.
T Consensus        63 --------~l~~LD~~E~~~~~Y~r~~v~v~~~~~~   90 (99)
T cd06661          63 --------DLARLDAFEGVPGGYRREEVEVELEDGE   90 (99)
T ss_pred             --------HHHhhhhhcCCCCCeEEEEEEEEeCCCC
Confidence                    9999999999   799999888666554

Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avir

>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli

Probab=98.70  E-value=5.4e-08  Score=86.09  Aligned_cols=151  Identities=21%  Similarity=0.320  Sum_probs=101.5

Q ss_pred             EEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEeccc
Q 039538           88 SISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIR  167 (311)
Q Consensus        88 sI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~~  167 (311)
                      =||||||||-.    ..|+ ..+-++|.++||+|.|..-...  .||-+.....   .|++++.++..+.+.+|+|+.+ 
T Consensus         2 WVFGYGSLiW~----p~f~-~~e~~~a~i~Gy~R~F~~~s~~--hRGTpe~PGr---vltL~~~~~~~c~Gvayrv~~~-   70 (178)
T PF04752_consen    2 WVFGYGSLIWN----PGFP-YAERRPAYIKGYHRRFCQGSTD--HRGTPEQPGR---VLTLDPGEEGSCWGVAYRVPEE-   70 (178)
T ss_pred             EEEEeccceeC----CCCC-ccceEEEEecCcccceEeeccc--cCCCcCCCcc---eeeeeeCCCCEEEEEEEEecCc-
Confidence            48999999974    3343 5677799999999999976555  7886665544   8899999999999999999987 


Q ss_pred             cchhhhhhcchhhhhhhcc--ceeeeeecc---cccCCCCCCCceeEEecCC-hHHHHHHHhcCChhhhhhhccccCccc
Q 039538          168 GIKLEELCTMIPAFIKREH--EFRFLAVSP---ETLDGKPFTNRAVLCARSS-DEEFFQIRCKGSKEIYFHHYGRYNIDK  241 (311)
Q Consensus       168 Gl~~eel~~~lpafieRE~--eY~~~~V~~---~~Ldg~p~~~~AvlCar~S-De~y~~~rC~~~~e~y~~~~gr~~i~~  241 (311)
                        .++|   .+..|.+||.  +|....|..   .+.++.+....|+...-.. ...|.               |..-.+.
T Consensus        71 --~~~~---~l~~L~~RE~~~Gy~~~~v~~~~~~~~~~~~~~~~al~yv~~~~n~~y~---------------g~~~~~~  130 (178)
T PF04752_consen   71 --DAEE---VLEYLDEREMIGGYTRHWVPFYPEVDTDSGPVIVEALVYVADPDNPQYL---------------GPLPLEE  130 (178)
T ss_pred             --CHHH---HHHHHhhcccccccceEEEEEEEeccCCCCceEEEEEEEEecCCCcccc---------------CCCCHHH
Confidence              3344   8999999999  688766655   2223333223455444221 12221               2222222


Q ss_pred             cc------cCCccccHhHHHHHHHHHHHhcHHHH
Q 039538          242 IW------RDDILPCRVYLRHCVLAAKNLGDEAY  269 (311)
Q Consensus       242 IW------~~dIlPcr~YLrhCvlAAk~lG~ea~  269 (311)
                      +=      ....=||+=||..=..+-..+|+..-
T Consensus       131 ~A~~Ia~a~G~~G~N~eYL~~l~~~L~~~gp~i~  164 (178)
T PF04752_consen  131 IARIIATASGPSGSNREYLFNLAEALRELGPGIR  164 (178)
T ss_pred             HHHHHhheECcCcCCHHHHHHHHHHHHHhCCCCC
Confidence            21      34555888898887777777775433

Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.

>PHA03014 hypothetical protein; Provisional

Probab=97.90  E-value=9.2e-05  Score=65.31  Aligned_cols=132  Identities=11%  Similarity=0.193  Sum_probs=94.3

Q ss_pred             EEEeeccccChhcccccCC---CccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEe
Q 039538           88 SISGFGSLLSENSARSTFP---NLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIK  164 (311)
Q Consensus        88 sI~GyGSLLse~SARsTFP---~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~  164 (311)
                      -+|+|||=||....+..-|   .-....+|++.||+=.|.....  |..          +-.+++|..|..+-|+|.||+
T Consensus         4 ~YfAYGSNl~~~qm~~Rcp~~~~a~~vg~a~L~~~~~~L~f~~~--~~G----------a~ATIvp~~g~~V~Gvlw~i~   71 (163)
T PHA03014          4 YYFGYGANQNINYLIHMHKLKIDFLNIKIGIILGHSFKLCYSKE--IDS----------VIASIKKDDNGIVFGILYEFN   71 (163)
T ss_pred             EEEEEccCcCHHHHHHhCCCCCCCceEEEEEeeccceEEeccCC--cCC----------ceEEEEECCCCEEEEEEEEeC
Confidence            4799999999999999999   8888889999966443431111  111          357999999999999999999


Q ss_pred             ccccchhhhhhcchhhhhhhcc---c-eeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccccCcc
Q 039538          165 KIRGIKLEELCTMIPAFIKREH---E-FRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNID  240 (311)
Q Consensus       165 ~~~Gl~~eel~~~lpafieRE~---e-Y~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr~~i~  240 (311)
                      .+          ++.+|+..|-   + |+.+.|.-..+++    ..-+.|-     .|.++.=+..+             
T Consensus        72 ~~----------dl~~LD~~EGvp~~~Y~~~~v~V~~~~~----~~~~~a~-----~Y~~~~~~~~~-------------  119 (163)
T PHA03014         72 ES----------IMKKFDKQEFIDKNIYKLAKMNVLDLED----EKIIEAQ-----AYKAILDDDNN-------------  119 (163)
T ss_pred             HH----------HHHHHhhhcCCCcCceEEEEEEEEeCCC----CcEEEEE-----EEehhcCCCcc-------------
Confidence            99          9999999996   3 8887777754542    1123444     33111001001             


Q ss_pred             ccccCCccccHhHHHHHHHHHHHhc
Q 039538          241 KIWRDDILPCRVYLRHCVLAAKNLG  265 (311)
Q Consensus       241 ~IW~~dIlPcr~YLrhCvlAAk~lG  265 (311)
                       +- .+..|-..||+.++.||+.-|
T Consensus       120 -~~-~~~~Ps~~Yl~~I~~Ga~e~G  142 (163)
T PHA03014        120 -MF-YDAPNFNIYKDIIIDALIENN  142 (163)
T ss_pred             -cc-cCCCChHHHHHHHHHHHHHhC
Confidence             00 345899999999999999877

>COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]

Probab=97.59  E-value=0.00014  Score=66.20  Aligned_cols=86  Identities=27%  Similarity=0.423  Sum_probs=62.3

Q ss_pred             CCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEE
Q 039538           83 PDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFE  162 (311)
Q Consensus        83 ~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFE  162 (311)
                      +++ +-||||||||=.---     ...+-++|.++||+|-|=-..  ..-||-++.+.. |..|-    .|-+.++.+|.
T Consensus         9 ~~~-~WVFgYGSLmW~P~f-----~~~e~~~a~~~G~~Rsfc~~s--~~~RGT~~~PGl-vl~L~----~GGsc~GvafR   75 (190)
T COG3703           9 PDE-LWVFGYGSLMWNPGF-----EFTEVRRATLHGYHRSFCLRS--TDHRGTAEQPGL-VLGLD----RGGSCEGVAYR   75 (190)
T ss_pred             CCC-eEEEEecceeecCCc-----cccceeEEEEecceeEEEEEE--eeecCCcCCCce-EEEee----CCCcEEEEEEE
Confidence            344 999999999964321     256788999999999986433  347886655544 33332    88899999999


Q ss_pred             Eeccccchhhhhhcchhhhhhhccc
Q 039538          163 IKKIRGIKLEELCTMIPAFIKREHE  187 (311)
Q Consensus       163 I~~~~Gl~~eel~~~lpafieRE~e  187 (311)
                      ||.+   ..++   .+--|.+||--
T Consensus        76 ip~~---~~~~---v~~yL~~RE~~   94 (190)
T COG3703          76 IPEA---HAEE---VLEYLREREMN   94 (190)
T ss_pred             cCch---hhHH---HHHHHHHhhcc
Confidence            9966   2333   78899999984

>KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism]

Probab=97.31  E-value=0.00066  Score=62.75  Aligned_cols=168  Identities=19%  Similarity=0.210  Sum_probs=101.7

Q ss_pred             ccCCCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEE
Q 039538           80 ITSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVT  159 (311)
Q Consensus        80 ~~~~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvs  159 (311)
                      -+|+++.+=|||||||+=.-    .| ....=+++-++||+|+|-. +++ .-||.+.....   .+..+|.+...--++
T Consensus         3 ~~s~~~~lWVFGYGSLiW~P----gf-~y~~~~~gfI~Gy~RrF~q-~s~-dHRGtp~~PGR---v~TLi~~~e~~~wGv   72 (212)
T KOG3182|consen    3 TTSDPMALWVFGYGSLIWKP----GF-HYDESIPGFIKGYKRRFWQ-GST-DHRGTPEHPGR---VATLIPYEEAITWGV   72 (212)
T ss_pred             CCCCCceEEEEeecceeecC----CC-Cccccchhhheehhhheec-ccc-ccCCCCCCCce---eEEeecCCcceEeeE
Confidence            45678899999999998532    22 2455568889999999964 233 47998777655   667778777777899


Q ss_pred             EEEEeccccchhhhhhcchhhhhhhcc-ceeeeeeccccc--CCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccc
Q 039538          160 VFEIKKIRGIKLEELCTMIPAFIKREH-EFRFLAVSPETL--DGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGR  236 (311)
Q Consensus       160 vFEI~~~~Gl~~eel~~~lpafieRE~-eY~~~~V~~~~L--dg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr  236 (311)
                      +|.|+..   -.-   +-+.-+.-||- ||.+..|..-.-  ...|.-..+++|..-.|.+|..  -+..-|.    -.+
T Consensus        73 ay~V~g~---~~~---~~l~yl~~RE~nGY~~~~v~f~~e~~~~~p~v~~vlvyvaTp~N~~yl--Gp~ple~----iAr  140 (212)
T KOG3182|consen   73 AYRVRGK---QAS---EVLEYLNVRELNGYTTHEVEFYPEDAAELPEVLGVLVYVATPDNEYYL--GPAPLEE----IAR  140 (212)
T ss_pred             EEEecch---hHH---HHHHHHHHHhhcCcceeeeeeeccCCCCCCceEEEEEEEecCCCcccc--CCccHHH----HHH
Confidence            9999764   111   13445666776 787777766322  2224334456666444433322  0100000    000


Q ss_pred             cCccccc--cCCccccHhHHHHHHHHHHHhcHHHHHhhh
Q 039538          237 YNIDKIW--RDDILPCRVYLRHCVLAAKNLGDEAYNNFL  273 (311)
Q Consensus       237 ~~i~~IW--~~dIlPcr~YLrhCvlAAk~lG~ea~~~FL  273 (311)
                          +|-  +..==||+-||.-=-.|-..++..+-|..|
T Consensus       141 ----qI~t~~GpsG~N~eYLf~La~am~~l~p~~~D~hl  175 (212)
T KOG3182|consen  141 ----QIVTARGPSGPNREYLFNLAKAMRQLFPGAEDEHL  175 (212)
T ss_pred             ----HHHhccCCCCCcHHHHHHHHHHHHHcCCCchhHHH
Confidence                122  455568999998766666667665555433

>KOG4059 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.64  E-value=0.0015  Score=59.28  Aligned_cols=97  Identities=24%  Similarity=0.273  Sum_probs=77.3

Q ss_pred             EEEEeeccccChhcccccCCCccceeEEEEcCceeeccc-cchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEec
Q 039538           87 ISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAH-VAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKK  165 (311)
Q Consensus        87 IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h-~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~  165 (311)
                      ..+|+|||=|=.+--+-.=|.-.-|=+|++.+||=-|+. .+.|            +=+.-.+.|.+|..+-++|.++++
T Consensus        24 FlYFafGSNlL~~RIh~rnpsA~~~c~a~L~dfrLdFan~S~~W------------~G~vATI~~t~GdeVWG~vWKm~~   91 (193)
T KOG4059|consen   24 FLYFAFGSNLLIKRIHIRNPSAVRICPALLPDFRLDFANESAGW------------SGSVATIVPTQGDEVWGTVWKMDL   91 (193)
T ss_pred             hhhhhcccchhhhheeecCCCceeeccccCcceeeecccccccc------------ccceeEEecCCCCeEEEEEEEccc
Confidence            689999997666656666666677778999999999985 2222            224567899999999999999999


Q ss_pred             cccchhhhhhcchhhhhhhc---cc-eeeeeecccccCCCCCCC
Q 039538          166 IRGIKLEELCTMIPAFIKRE---HE-FRFLAVSPETLDGKPFTN  205 (311)
Q Consensus       166 ~~Gl~~eel~~~lpafieRE---~e-Y~~~~V~~~~Ldg~p~~~  205 (311)
                      +          ++|.++|.|   .| |..+.|....-.|+..++
T Consensus        92 s----------nl~slDeQEgv~~G~Y~~~~V~V~t~eg~~itc  125 (193)
T KOG4059|consen   92 S----------NLPSLDEQEGVSQGIYEPRTVYVKTHEGESITC  125 (193)
T ss_pred             c----------cCccchhhhcccccceEEEEEEEecCCCceeeh
Confidence            9          999999999   78 999999887777765443

>PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 []

Probab=95.73  E-value=0.019  Score=44.18  Aligned_cols=85  Identities=21%  Similarity=0.263  Sum_probs=54.5

Q ss_pred             EEeeccccChhcccccCCCc---cceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCe-eEEEEEEEEe
Q 039538           89 ISGFGSLLSENSARSTFPNL---INFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQ-TLIVTVFEIK  164 (311)
Q Consensus        89 I~GyGSLLse~SARsTFP~l---~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~-~~vvsvFEI~  164 (311)
                      ||-||||++.......++..   ...+.+.+.  .+.+.        .+...|        .+.|+++. .+.|.||+|+
T Consensus         1 lFvYGTL~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~~~yP--------~l~~~~~~~~V~G~l~~v~   62 (102)
T PF06094_consen    1 LFVYGTLMDGEVNHSVLGRPGAKFIGEPATLG--GRYLY--------GGGGYP--------ALVPGEGSGRVEGELYEVD   62 (102)
T ss_dssp             EEESSTTSTTSTTGHHGTSGSSEEEEEEEEEE--EEEEE--------TTSSCE--------EEESCTTSSEEEEEEEEE-
T ss_pred             CEEECCCCCCCcChhhhhccceEEEEeeEEEE--eEEEe--------CCCCCC--------EEEEcCCCCEEEEEEEEEC
Confidence            68999999998887776531   122233333  12211        111222        45566666 8999999998


Q ss_pred             ccccchhhhhhcchhhhhhhc---cceeeeeecccccCCC
Q 039538          165 KIRGIKLEELCTMIPAFIKRE---HEFRFLAVSPETLDGK  201 (311)
Q Consensus       165 ~~~Gl~~eel~~~lpafieRE---~eY~~~~V~~~~Ldg~  201 (311)
                      .+          +|..|++-|   ..|++..|....-+|+
T Consensus        63 ~~----------~l~~LD~~E~~~~~Y~R~~v~v~~~~g~   92 (102)
T PF06094_consen   63 DE----------ELARLDEYEGEGSLYRRVRVPVELGDGE   92 (102)
T ss_dssp             HH----------HHHHHHHHTTTTTSEEEEEEEEECCTSS
T ss_pred             HH----------HHHhhHhhcCCCCceEEEEEEEEeCCCC
Confidence            88          788888886   3899988877655553

Its structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. Conserved residues in a hydrophilic cavity, which are able to bind small ligands, may act as an active site in AIG2-like proteins [].; PDB: 1XHS_A 2KL2_A 1VKB_A 3JUD_A 3JUB_A 3JUC_A 2JQV_A 2QIK_A 2G0Q_A 1V30_A.

>PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A

Probab=92.86  E-value=0.26  Score=38.09  Aligned_cols=69  Identities=22%  Similarity=0.323  Sum_probs=47.9

Q ss_pred             EEEEEEEEeccccchhhhhhcchhhhhhhcc----ceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhh
Q 039538          156 LIVTVFEIKKIRGIKLEELCTMIPAFIKREH----EFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYF  231 (311)
Q Consensus       156 ~vvsvFEI~~~~Gl~~eel~~~lpafieRE~----eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~  231 (311)
                      +.|.|+||+.+          +++.|+.+|-    .|+...|.-..-||++     +.|.     .|++     .+    
T Consensus         2 V~Gvly~l~~~----------d~~~LD~~Eg~~~g~Y~~~~v~V~~~~g~~-----~~a~-----tY~~-----~~----   52 (83)
T PF13772_consen    2 VWGVLYELSEE----------DLESLDRYEGVPIGAYRRIEVTVSTADGKP-----VEAF-----TYVA-----NP----   52 (83)
T ss_dssp             EEEEEEEEEGG----------GHHHHHHHTTTTTTSEEEEEEEEEETTCEE-----EEEE-----EEEE-----SS----
T ss_pred             EEEEEEEECHH----------HHHHHHHhcCCCCCCEEEEEEEEEcCCCCE-----EEEE-----EEEc-----CC----
Confidence            57899999999          9999999997    5999988886656543     3343     2222     11    


Q ss_pred             hhccccCccccccCCccccHhHHHHHHHHHHHhc
Q 039538          232 HHYGRYNIDKIWRDDILPCRVYLRHCVLAAKNLG  265 (311)
Q Consensus       232 ~~~gr~~i~~IW~~dIlPcr~YLrhCvlAAk~lG  265 (311)
                                 +.+ ..|..-||.+++.||+..|
T Consensus        53 -----------~~~-~~Ps~~Yl~~i~~GA~e~g   74 (83)
T PF13772_consen   53 -----------KPE-GPPSDRYLDLILRGAREHG   74 (83)
T ss_dssp             -----------EEE-----HHHHHHHHHHHHHCT
T ss_pred             -----------CCC-CCCCHHHHHHHHHHHHHcC
Confidence                       112 6699999999999998655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	311
3cry_A	188	Gamma-glutamyl cyclotransferase; enzyme, oxoprolin	99.17
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	99.05
2jqv_A	165	AT3G28950, AIG2 protein-like; structural genomics,	98.79
2g0q_A	173	AT5G39720.1 protein; structural genomics, protein	98.34
1v30_A	124	Hypothetical UPF0131 protein PH0828; alpha+beta, s	97.51
1xhs_A	121	Hypothetical UPF0131 protein YTFP; structure, auto	96.52
3jud_A	153	AIG2-like domain-containing protein 1; cyclotransf	92.43
1vkb_A	161	Hypothetical protein; gamma-glutamyl cyclotransfer	90.83

>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A

Probab=99.17  E-value=1.1e-10  Score=99.46  Aligned_cols=143  Identities=16%  Similarity=0.169  Sum_probs=102.7

Q ss_pred             CCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEE
Q 039538           84 DGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEI  163 (311)
Q Consensus        84 d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI  163 (311)
                      ...+-||+|||||+.......-|+-....+|++.||+|.|...       |+.-...-.-...+++|..|..+.|.|++|
T Consensus        14 ~~~~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~-------~~~~~~~~~g~~~~lv~~~g~~V~G~ly~v   86 (188)
T 3cry_A           14 EESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNS-------QGKTSQTWHGGIATIFQSPGDEVWGVVWKM   86 (188)
T ss_dssp             CCEEEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEE-------TTCCCTTTSSCEEEEEEEEEEEEEEEEEEE
T ss_pred             CCCEEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCC-------CCCCcCCCCCeeEeEEeCCCCEEEEEEEEE
Confidence            4679999999999998887777776677899999999999953       211000001134578888899999999999


Q ss_pred             eccccchhhhhhcchhhhhhhcc----ceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccccCc
Q 039538          164 KKIRGIKLEELCTMIPAFIKREH----EFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNI  239 (311)
Q Consensus       164 ~~~~Gl~~eel~~~lpafieRE~----eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr~~i  239 (311)
                      +.+          ++..|++||-    .|+.+.|.....||.+.  .|+.-.        .     .+            
T Consensus        87 ~~~----------~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~~~--~a~vYv--------~-----~~------------  129 (188)
T 3cry_A           87 NKS----------NLNSLDEQQGVKSGMYVVIEVKVATQEGKEI--TCRSYL--------M-----TN------------  129 (188)
T ss_dssp             EGG----------GHHHHHHHTTGGGTSCEEEEEEEEETTCCEE--EEEEEE--------C-----SS------------
T ss_pred             CHH----------HHHHHHHHhCCCCCcEEEEEEEEEeCCCCEE--EEEEEE--------e-----cC------------
Confidence            998          8999999995    79999887765566331  222211        1     01            


Q ss_pred             cccccCCccccHhHHHHHHHHHHHh--cHHHHHhhhh
Q 039538          240 DKIWRDDILPCRVYLRHCVLAAKNL--GDEAYNNFLD  274 (311)
Q Consensus       240 ~~IW~~dIlPcr~YLrhCvlAAk~l--G~ea~~~FLd  274 (311)
                          .....|..-||.+.+.||+..  .++..+.+..
T Consensus       130 ----~~~~~ps~~Yl~~i~~g~~~~gl~~~y~~~L~~  162 (188)
T 3cry_A          130 ----YESAPPSPQYKKIICMGAKENGLPLEYQEKLKA  162 (188)
T ss_dssp             ----EEECCCCHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred             ----CCCCCChHHHHHHHHHHHHHhCcCHHHHHHHhc
Confidence                012679999999999999984  4665555553

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}

Probab=99.05  E-value=6.6e-10  Score=100.50  Aligned_cols=139  Identities=17%  Similarity=0.128  Sum_probs=101.3

Q ss_pred             CCeEEEEeeccccChhcccc-cCCCc--cceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEE
Q 039538           84 DGLISISGFGSLLSENSARS-TFPNL--INFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTV  160 (311)
Q Consensus        84 d~~IsI~GyGSLLse~SARs-TFP~l--~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsv  160 (311)
                      .+.+-||||||||+...... ..|.-  .-..+|++.||+|.|+ .  ..+.+|          ..+++|. |..+.|.+
T Consensus       125 ~~~~~yFaYGSnm~~~~~~~~~~p~~~~~~~~~a~L~G~~l~F~-~--~~~~~g----------~a~iv~~-g~~v~Gvl  190 (285)
T 2qik_A          125 KNPIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFT-L--KREDGS----------RADMLED-GGTTEGVL  190 (285)
T ss_dssp             CSSEEEEECSGGGSSHHHHHHTCGGGSSCEEEEEEEETCEEEEE-E--EETTEE----------EEEEECS-SCEEEEEE
T ss_pred             CCcEEEEEechhcCHhhcccccCCcccceEeEEEEEeCeEEEcC-c--CCCCCe----------eeeEEEC-CCEEEEEE
Confidence            45799999999999998776 45654  3446999999999999 2  223444          3578888 99999999


Q ss_pred             EEEeccccchhhhhhcchhhhhhhcc----ceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccc
Q 039538          161 FEIKKIRGIKLEELCTMIPAFIKREH----EFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGR  236 (311)
Q Consensus       161 FEI~~~~Gl~~eel~~~lpafieRE~----eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr  236 (311)
                      ++|+.+          ++..|++||-    .|+.+.|.....||.++  +|+.-.        .   . .+         
T Consensus       191 y~i~~~----------~l~~LD~~Eg~~~g~Y~r~~v~v~~~~g~~~--~a~~Yv--------~---~-~~---------  237 (285)
T 2qik_A          191 YRIPYS----------ALSYLYKREGVESLTYRPAFVDVEAGGRHYK--DCLTFL--------V---L-QK---------  237 (285)
T ss_dssp             EEECGG----------GHHHHHHHTTTTTTSEEEEEEEEEETTEEEE--EEEEEE--------E---S-SC---------
T ss_pred             EEECHH----------HHHHHHHhhCCCCCceEEEEEEEEECCCCEE--EEEEEE--------e---c-CC---------
Confidence            999998          9999999994    49998887765554321  222221        1   0 00         


Q ss_pred             cCccccccCCccccHhHHHHHHHHHH-HhcHHHHHhhhhcc
Q 039538          237 YNIDKIWRDDILPCRVYLRHCVLAAK-NLGDEAYNNFLDHT  276 (311)
Q Consensus       237 ~~i~~IW~~dIlPcr~YLrhCvlAAk-~lG~ea~~~FLdtT  276 (311)
                             .....|..-||.+.+.||. .+.++..+++..++
T Consensus       238 -------~~~~~Ps~~Yl~~i~~g~~~g~~~~Y~~~l~~~~  271 (285)
T 2qik_A          238 -------EAEIAPPQHYQIEIERGAELYLSPEFTEKLKRHM  271 (285)
T ss_dssp             -------CCCCCCCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence                   1358899999999999998 55666666665544

>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}

Probab=98.79  E-value=1.4e-08  Score=84.97  Aligned_cols=93  Identities=17%  Similarity=0.232  Sum_probs=76.2

Q ss_pred             CCCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEE
Q 039538           82 SPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVF  161 (311)
Q Consensus        82 ~~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvF  161 (311)
                      |++..+-||+||||++........++....++|.+.||+|.|.        +|-.        -..+.|.+|..+.|.|+
T Consensus         4 s~~~~~~vFvYGSL~~~~~~~~~~~~~~~~~~a~l~Gy~~~~~--------~~~~--------yP~lv~~~~~~V~G~v~   67 (165)
T 2jqv_A            4 SDPQSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYKL--------KGLP--------YPCIVSSDSGKVNGKVI   67 (165)
T ss_dssp             CCSSCEEEEESSTTSSHHHHHHHTSSCCEEEEEEEETCEECCC--------TTSS--------SCCEESCCSSEEEEEEE
T ss_pred             CCCCceEEEEEcCCCCchhhHHHhCCCCccceEEEeCeEEEec--------CCCC--------CCEEEECCCCEEEEEEE
Confidence            4556789999999999999888778888899999999999985        1111        23567778889999999


Q ss_pred             E-Eeccccchhhhhhcchhhhhhhc-cceeeeeecccccCC
Q 039538          162 E-IKKIRGIKLEELCTMIPAFIKRE-HEFRFLAVSPETLDG  200 (311)
Q Consensus       162 E-I~~~~Gl~~eel~~~lpafieRE-~eY~~~~V~~~~Ldg  200 (311)
                      + |+.+          +|..|+++| .+|+++.|.....||
T Consensus        68 ~~v~~~----------~l~~LD~~E~~~Y~R~~v~v~~~dg   98 (165)
T 2jqv_A           68 TGVSDA----------ELNNFDVIEGNDYERVTVEVVRMDN   98 (165)
T ss_dssp             EEECHH----------HHHHHHHTTTTSEEEEEEEEEETTT
T ss_pred             EeCCHH----------HHHHHHHhccCCcEEEEEEEEECCC
Confidence            6 8877          899999999 799999888765565

>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}

Probab=98.34  E-value=1.5e-06  Score=74.14  Aligned_cols=94  Identities=18%  Similarity=0.216  Sum_probs=70.0

Q ss_pred             cCCCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEE
Q 039538           81 TSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTV  160 (311)
Q Consensus        81 ~~~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsv  160 (311)
                      .+++....||+||||++......-.......++|++.||+|.+-        +|-..|        .+.|.+|..+.|.|
T Consensus        12 ~~~~~~~~vFvYGSL~~~~~~~~~l~~~~~~~~A~l~Gy~l~~~--------~~~~yP--------~lv~~~g~~V~G~v   75 (173)
T 2g0q_A           12 SDSLQLHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRL--------KGRLYP--------CIVPSEKGEVHGKV   75 (173)
T ss_dssp             SCCSSSEEEEECSGGGCHHHHHHHTSSCCEEEEEEEETCEECCC--------CSSSCC--------CEECCTTCEEEEEE
T ss_pred             CCCCCCEEEEEEcCCCCCccCHHHhcCCCceeEEEEcCeEEEee--------CCCeee--------EEEECCCCEEEEEE
Confidence            34566789999999999996444333445569999999997543        222222        56778888899988


Q ss_pred             E-EEeccccchhhhhhcchhhhhhhc-cceeeeeecccccCC
Q 039538          161 F-EIKKIRGIKLEELCTMIPAFIKRE-HEFRFLAVSPETLDG  200 (311)
Q Consensus       161 F-EI~~~~Gl~~eel~~~lpafieRE-~eY~~~~V~~~~Ldg  200 (311)
                      + +|+.+          +|..|+++| .+|+++.|.....||
T Consensus        76 ~~~v~~~----------~l~~LD~~Eg~~Y~R~~v~V~~~dg  107 (173)
T 2g0q_A           76 LMGVTSD----------ELENLDAVEGNEYERVTVGIVREDN  107 (173)
T ss_dssp             EEEECHH----------HHHHHHHHHTTTEEEEEEEEEESSS
T ss_pred             EEEcCHH----------HHHHHHHHhhcCCEEEEEEEEECCC
Confidence            6 58877          899999999 699999887665554

>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1

Probab=97.51  E-value=0.00019  Score=58.47  Aligned_cols=79  Identities=20%  Similarity=0.292  Sum_probs=61.1

Q ss_pred             eEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEec
Q 039538           86 LISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKK  165 (311)
Q Consensus        86 ~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~  165 (311)
                      .+.||.||||++...-..-.++-.-...|++.||+..+.           ..|        .+.|.+|. +.|.|+||+.
T Consensus         7 ~~~vFVYGTL~~g~~n~~~l~~a~~~g~a~l~gy~L~~g-----------~yP--------~lv~~~g~-V~Gev~~v~~   66 (124)
T 1v30_A            7 SVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLYFE-----------YLP--------YAVKGKGK-LKVEVYEVDK   66 (124)
T ss_dssp             CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEEES-----------SSE--------EEEEEEEE-EEEEEEEECH
T ss_pred             ccEEEEECCCCCchHhHHhcCCCcEEEEEEEeeEEEEEC-----------CCC--------EEEecCCE-EEEEEEEECH
Confidence            467999999999988877666644456788889988722           122        23355666 9999999988


Q ss_pred             cccchhhhhhcchhhhhhhc--cceeeeeec
Q 039538          166 IRGIKLEELCTMIPAFIKRE--HEFRFLAVS  194 (311)
Q Consensus       166 ~~Gl~~eel~~~lpafieRE--~eY~~~~V~  194 (311)
                      +          +|.+|++-|  .+|+++.|.
T Consensus        67 ~----------~l~~LD~~E~~~~Y~R~~V~   87 (124)
T 1v30_A           67 E----------TFERINEIEIGTGYRLVEVS   87 (124)
T ss_dssp             H----------HHHHHTTCGGGGGEEEEEEC
T ss_pred             H----------HHHHhhhccCCCCeEEEEEE
Confidence            8          899999999  789999875

>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1

Probab=96.52  E-value=0.0019  Score=52.12  Aligned_cols=88  Identities=17%  Similarity=0.194  Sum_probs=62.3

Q ss_pred             EEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEeccc
Q 039538           88 SISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIR  167 (311)
Q Consensus        88 sI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~~  167 (311)
                      .||-||||++...-..-.++-.-..++.+.||+..+.         | ..|        .+.|.+| .+.|.|++|+.+ 
T Consensus         2 ~vFvYGTL~~g~~~~~~l~~a~~~g~a~l~gy~L~~~---------g-~yP--------~lv~~~g-~V~Gevy~v~~~-   61 (121)
T 1xhs_A            2 RIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSL---------G-HYP--------GAVPGNG-TVHGEVYRIDNA-   61 (121)
T ss_dssp             EEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEEC---------S-SSE--------EEEEEEE-EEEEEEEECCHH-
T ss_pred             EEEEECCCCCcccchhhcCCCcEEEEEEEeCcEEEEe---------c-CCC--------eEEecCC-EEEEEEEEeCHH-
Confidence            5899999999776655444433445699999998854         1 122        1235566 789999999877 


Q ss_pred             cchhhhhhcchhhhhhhc---cceeeeeecccccCCCCCCCceeEEe
Q 039538          168 GIKLEELCTMIPAFIKRE---HEFRFLAVSPETLDGKPFTNRAVLCA  211 (311)
Q Consensus       168 Gl~~eel~~~lpafieRE---~eY~~~~V~~~~Ldg~p~~~~AvlCa  211 (311)
                               +|.+|++=|   .+|+++.|..  .+|     .|++..
T Consensus        62 ---------~l~~LD~~Eg~~~~Y~R~~v~~--~~g-----~a~vY~   92 (121)
T 1xhs_A           62 ---------TLAELDALRTRGGEYARQLIQT--PYG-----SAWMYV   92 (121)
T ss_dssp             ---------HHHHHHHHHSTTSCEEEEEEEE--TTE-----EEEEEE
T ss_pred             ---------HHHHHHHhcCCCCCEEEEEEEc--CCC-----EEEEEE
Confidence                     888888888   6899998873  222     677766

>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A

Probab=92.43  E-value=0.28  Score=41.17  Aligned_cols=90  Identities=16%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             EEEeeccccChhcccccCCCcccee--EEEEcCceeecc-ccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEe
Q 039538           88 SISGFGSLLSENSARSTFPNLINFR--VAKLHGFRRVFA-HVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIK  164 (311)
Q Consensus        88 sI~GyGSLLse~SARsTFP~l~nFR--~a~l~G~RRVF~-h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~  164 (311)
                      .||-||+|..-.+--.-   +.+.|  .|++.|--+.-. +.+-+   .|-     .....|-.+|.+|..+.|.|++|+
T Consensus         3 ~vFVYGTL~~G~~Nh~~---l~~~~~~~A~~~G~~~t~~~Ypl~~---~g~-----~~~P~l~~~p~~g~~V~G~ly~v~   71 (153)
T 3jud_A            3 LVFVYGTLKRGQPNHRV---LRDGAHGSAAFRARGRTLEPYPLVI---AGE-----HNIPWLLHLPGSGRLVEGEVYAVD   71 (153)
T ss_dssp             EEEECSTTSTTSTTGGG---GTCGGGCCEEEEEEEEESSCBCEEE---ETT-----TTEEEEBSCTTSSBCCEEEEEEEC
T ss_pred             EEEEeCCCCCCCcChHH---HhcCcCCCeEEEEEEEeCCCccEEE---ecC-----CCCceEEecCCCCCEEEEEEEEEC
Confidence            58999998765432221   33221  355555544432 22211   120     012356667888889999999999


Q ss_pred             ccccchhhhhhcchhhhhhhc---cceeeeeeccccc
Q 039538          165 KIRGIKLEELCTMIPAFIKRE---HEFRFLAVSPETL  198 (311)
Q Consensus       165 ~~~Gl~~eel~~~lpafieRE---~eY~~~~V~~~~L  198 (311)
                      .+          +|..|++.|   .+|+++.|....+
T Consensus        72 ~~----------~l~~LD~~Eg~~~~Y~R~~v~V~~~   98 (153)
T 3jud_A           72 ER----------MLRFLDDFQSCPALYQRTVLRVQLL   98 (153)
T ss_dssp             HH----------HHHHHHHHTTTTTSCEEEEEEEEEE
T ss_pred             HH----------HHHHHHHhcCCCCceEEEEEEEEee
Confidence            87          899999999   5899988877554

>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A

Probab=90.83  E-value=0.33  Score=40.90  Aligned_cols=43  Identities=16%  Similarity=0.223  Sum_probs=36.3

Q ss_pred             ccceeecCCeeEEEEEEEEeccccchhhhhhcchhhhhhhc---cceeeeeecccc
Q 039538          145 SLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKRE---HEFRFLAVSPET  197 (311)
Q Consensus       145 sLsvEp~~g~~~vvsvFEI~~~~Gl~~eel~~~lpafieRE---~eY~~~~V~~~~  197 (311)
                      -+.++|.+|..+.|.|++|+.+          +|.+|++-|   ..|+++.|....
T Consensus        64 ~~~i~p~~g~~V~Gevy~v~~~----------~L~~LD~~Eg~p~~Y~R~~v~V~~  109 (161)
T 1vkb_A           64 WLLYLPGKGHCVTGEIYEVDEQ----------MLRFLDDFEDCPSMYQRTALQVQV  109 (161)
T ss_dssp             EEESCTTSSBCCEEEEEEECHH----------HHHHHHHHTTTTTSCEEEEEEEEE
T ss_pred             eeEeecCCCCEEEEEEEEECHH----------HHHHHHHhcCCCCceEEEEEEEEe
Confidence            4778889999999999999988          888888888   589998877644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	311
d1vkba_	151	Hypothetical protein LOC223267 {Mouse (Mus musculu	95.13
d1v30a_	118	Hypothetical protein PH0828 {Pyrococcus horikoshii	94.61
d1xhsa_	113	Hypothetical protein YtfP {Escherichia coli [TaxId	94.36

>d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein LOC223267
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.13  E-value=0.0061  Score=48.50  Aligned_cols=91  Identities=15%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             EEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEeccc
Q 039538           88 SISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIR  167 (311)
Q Consensus        88 sI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~~  167 (311)
                      -||.||||+.....-..+-+.. -..++..|..|....-.-+  ..|     +.....|..++..+..+.+.||+|+.. 
T Consensus         5 ~lFvYGTL~~g~~n~~~l~~~~-~~~a~~~g~~~t~~~~~l~--~~g-----~~~yP~l~~~~~~~~~V~G~l~~v~~~-   75 (151)
T d1vkba_           5 HIFVYGTLKRGQPNHKVMLDHS-HGLAAFRGRGCTVESFPLV--IAG-----EHNIPWLLYLPGKGHCVTGEIYEVDEQ-   75 (151)
T ss_dssp             EEEECSTTSTTSTTTHHHHCGG-GCCEEEEEEEEESSCBCEE--EET-----TTTEEEEESCTTSSBCCEEEEEEECHH-
T ss_pred             EEEEEcCCCCCCcChHHHhccc-cCcceEEEEEEEccceeEE--EeC-----CCCcCEEEeeCCCCcEEEEEEEEcCHH-
Confidence            4899999986543222211101 1124444444433321100  111     011234556677888899999999988 


Q ss_pred             cchhhhhhcchhhhhhhc---cceeeeeeccc
Q 039538          168 GIKLEELCTMIPAFIKRE---HEFRFLAVSPE  196 (311)
Q Consensus       168 Gl~~eel~~~lpafieRE---~eY~~~~V~~~  196 (311)
                               .|++|++.|   ..|++..|...
T Consensus        76 ---------~l~~LD~~Eg~~~~Y~R~~v~V~   98 (151)
T d1vkba_          76 ---------MLRFLDDFEDCPSMYQRTALQVQ   98 (151)
T ss_dssp             ---------HHHHHHHHTTTTTSCEEEEEEEE
T ss_pred             ---------HHHhhHHhcCCCCceEEEEEEEE
Confidence                     899999999   68999777664

>d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein PH0828
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.61  E-value=0.043  Score=42.43  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=54.0

Q ss_pred             EEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEecc
Q 039538           87 ISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKI  166 (311)
Q Consensus        87 IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~  166 (311)
                      |-||-||+|+.......-..+-.-.-+|.+.||.....           ..|        .+.|.+| .+.|.|++|+.+
T Consensus         2 ~rvFVYGTL~~g~~n~~~l~~~~~i~~a~~~g~~~~~~-----------~yP--------~~v~~~g-~V~Gevy~v~~~   61 (118)
T d1v30a_           2 VRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLYFE-----------YLP--------YAVKGKG-KLKVEVYEVDKE   61 (118)
T ss_dssp             EEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEEES-----------SSE--------EEEEEEE-EEEEEEEEECHH
T ss_pred             cEEEEECCCCCCCCChHHhCCCcEEEEEEEeeeEeecC-----------CCC--------EEEeCCC-CEEEEEEEECHH
Confidence            67999999997766654433322244788899876543           122        1223444 489999999887


Q ss_pred             ccchhhhhhcchhhhhhhcc--ceeeeeeccc
Q 039538          167 RGIKLEELCTMIPAFIKREH--EFRFLAVSPE  196 (311)
Q Consensus       167 ~Gl~~eel~~~lpafieRE~--eY~~~~V~~~  196 (311)
                                .|+.|++=|-  +|+++.|..+
T Consensus        62 ----------~l~~LD~~Eg~~~Y~R~~v~~~   83 (118)
T d1v30a_          62 ----------TFERINEIEIGTGYRLVEVSTK   83 (118)
T ss_dssp             ----------HHHHHTTCGGGGGEEEEEECCT
T ss_pred             ----------HHHhhccccCCCCeEEEEEEcc
Confidence                      6777777773  6998887654

>d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein YtfP
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.015  Score=43.93  Aligned_cols=80  Identities=15%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             EEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEecc
Q 039538           87 ISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKI  166 (311)
Q Consensus        87 IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~  166 (311)
                      |-||-||||++......-.++-.-...|.+.||+..+..          .-|        .+.|.+| .+.|.|+||+.+
T Consensus         1 m~lFvYGTL~~g~~~~~~l~~~~~~~~~~~~g~~l~~~~----------~yP--------~lv~~~~-~V~Gely~v~~~   61 (113)
T d1xhsa_           1 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLG----------HYP--------GAVPGNG-TVHGEVYRIDNA   61 (113)
T ss_dssp             CEEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEECS----------SSE--------EEEEEEE-EEEEEEEECCHH
T ss_pred             CEEEEEcCCCCCCcChhhhCCCcEEeEEEEeeeEEeccC----------CCC--------EEEeCCC-cEEEEEEEECHH
Confidence            358999999988765544444334567889999876541          112        1345566 589999999887


Q ss_pred             ccchhhhhhcchhhhhhhcc---ceeeeeecc
Q 039538          167 RGIKLEELCTMIPAFIKREH---EFRFLAVSP  195 (311)
Q Consensus       167 ~Gl~~eel~~~lpafieRE~---eY~~~~V~~  195 (311)
                                .|..|++=|-   .|.+..|..
T Consensus        62 ----------~l~~LD~~Eg~~~~Y~R~~v~v   83 (113)
T d1xhsa_          62 ----------TLAELDALRTRGGEYARQLIQT   83 (113)
T ss_dssp             ----------HHHHHHHHHSTTSCEEEEEEEE
T ss_pred             ----------HHHHhhcccCCCCcEEEEEEEE
Confidence                      6777777774   488877765