Citrus Sinensis ID: 039568

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKLDRSYRRSEVSGQ
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHcccHHHHHHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHcHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEEEccccccccHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
ltvaekdvatlgpildHVAATNLSIIQknlwdpdvrRALLFNDRVEEGDATWQVIRALSQKLDrsyrrsevsgq
Flexible Loop (DISEMBL)
ltvaekdvatlgpildHVAATNLSIiqknlwdpdVRRALLFNdrveegdatwQVIRAlsqkldrsyrrsevsgq
Low Complexity Region (SEG)
LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKLDRSYRRSEVSGQ
Disordered region (IsUnstruct)
*******VATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRAL****************
Disordered Region (DISOPRED)
*TVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ**************
Disordered Region (DISEMBL)
LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQK*************
Disordered Region (DISPRO)
LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKLD***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKLDRSYRRSEVSGQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
Q9ZUV3	448	Probable glucuronoxylan g	yes	no	0.932	0.154	0.724	2e-22
Q10SX7	427	Probable glucuronosyltran	yes	no	0.918	0.159	0.691	1e-19
Q6NMM8	469	Probable glucuronoxylan g	no	no	1.0	0.157	0.613	4e-18
Q9FZJ1	412	Probable beta-1,4-xylosyl	no	no	0.810	0.145	0.383	0.0005

>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAE+DV  LG IL+HVAATNLS+IQ+NL DP VRRAL+FN    EGDATWQV+ ALS+
Sbjct: 376 LTVAERDVGKLGDILEHVAATNLSVIQRNLEDPSVRRALMFNVPSREGDATWQVLEALSK 435

Query: 61  KLDRSYRRS 69
           KL+RS RRS
Sbjct: 436 KLNRSVRRS 444

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 55/68 (80%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           L VAEKDVA+L  +LDHV ATNL++IQKNLWDP  R+AL+FN  +EEGDATWQV+R L  
Sbjct: 353 LQVAEKDVASLEMVLDHVVATNLTVIQKNLWDPVKRKALVFNRPMEEGDATWQVLRELEI 412

Query: 61  KLDRSYRR 68
            LDRS RR
Sbjct: 413 LLDRSQRR 420

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q6NMM8|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDV  L  +L+HVAATNLS IQ+NL +P  +RALL+N  ++EGDATW ++ +L +
Sbjct: 390 LTVAEKDVRNLRKVLEHVAATNLSAIQRNLHEPVFKRALLYNVPMKEGDATWHILESLWR 449

Query: 61  KL-DRSYRRSEVSGQ 74
           KL DRSYRRS V  Q
Sbjct: 450 KLDDRSYRRSRVLSQ 464

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 3   VAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKL 62
           VAEKDV  L  IL  +    +   Q+ L +P ++RA+LF    + GDA  Q++  L++KL
Sbjct: 325 VAEKDVPELDTILTSIPTEVILRKQRLLANPSMKRAMLFPQPAQPGDAFHQILNGLARKL 384

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
224106838	462	predicted protein [Populus trichocarpa]	1.0	0.160	0.797	4e-27
118481039	239	unknown [Populus trichocarpa]	1.0	0.309	0.797	6e-26
114325715	442	glycosyltransferase GT47C [Populus tremu	1.0	0.167	0.783	1e-25
60657602	442	secondary cell wall-related glycosyltran	0.972	0.162	0.791	4e-25
449456052	459	PREDICTED: probable glucuronoxylan glucu	1.0	0.161	0.743	9e-25
255565439	461	transferase, putative [Ricinus communis]	1.0	0.160	0.743	3e-24
449496198	459	PREDICTED: LOW QUALITY PROTEIN: probable	1.0	0.161	0.716	2e-23
356541948	459	PREDICTED: probable glucuronoxylan glucu	1.0	0.161	0.693	5e-22
356547155	458	PREDICTED: probable glucuronoxylan glucu	1.0	0.161	0.710	6e-22
42570324	448	exostosin-like protein [Arabidopsis thal	0.932	0.154	0.724	7e-21

>gi|224106838|ref|XP_002314302.1| predicted protein [Populus trichocarpa] gi|222850710|gb|EEE88257.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/74 (79%), Positives = 65/74 (87%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDVA LG +LDHVAATNLS IQKNLWDPDVRRALLFNDRV+EGDATWQV+ AL++
Sbjct: 389 LTVAEKDVANLGTLLDHVAATNLSAIQKNLWDPDVRRALLFNDRVQEGDATWQVLYALAR 448

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRSYR   +  Q
Sbjct: 449 KLDRSYRTVRLPNQ 462

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481039|gb|ABK92473.1| unknown [Populus trichocarpa]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 65/74 (87%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDVA LG +LDHVAATNLS IQKNLWDPDVRRALLFNDRV+EGDATWQV+ AL++
Sbjct: 166 LTVAEKDVANLGTLLDHVAATNLSAIQKNLWDPDVRRALLFNDRVQEGDATWQVLYALAR 225

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRSYR   +  Q
Sbjct: 226 KLDRSYRTVRLPNQ 239

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|114325715|gb|ABI64067.1| glycosyltransferase GT47C [Populus tremula x Populus alba]

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/74 (78%), Positives = 63/74 (85%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDVA LG +LD VAATNLS IQKNLWDPDVRRALLFND V+ GDATWQV+ AL+Q
Sbjct: 369 LTVAEKDVANLGTLLDQVAATNLSAIQKNLWDPDVRRALLFNDPVQGGDATWQVLYALAQ 428

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRSYR   +S Q
Sbjct: 429 KLDRSYRTVRLSNQ 442

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60657602|gb|AAX33322.1| secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/72 (79%), Positives = 62/72 (86%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDVA LG +LD VAATNLS IQKNLWDPDVRRALLFND V+ GDATWQV+ AL+Q
Sbjct: 369 LTVAEKDVANLGTLLDQVAATNLSAIQKNLWDPDVRRALLFNDPVQGGDATWQVLYALAQ 428

Query: 61  KLDRSYRRSEVS 72
           KLDRSYR   +S
Sbjct: 429 KLDRSYRTVRLS 440

Source: Populus tremula x Populus tremuloides

Species: Populus tremula x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456052|ref|XP_004145764.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Cucumis sativus]

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/74 (74%), Positives = 64/74 (86%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           +TVAEKD+  LG ILDHVAA+NL+ IQKNLWDP  RRALLF+++VE+GDATWQVI ALS+
Sbjct: 386 ITVAEKDIGKLGRILDHVAASNLTTIQKNLWDPRNRRALLFHNQVEDGDATWQVIGALSE 445

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRSYRRS V  Q
Sbjct: 446 KLDRSYRRSRVLKQ 459

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565439|ref|XP_002523710.1| transferase, putative [Ricinus communis] gi|223537014|gb|EEF38650.1| transferase, putative [Ricinus communis]

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/74 (74%), Positives = 64/74 (86%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAEKDVA LG IL+ VAATNL++IQKN+WDP VRRALLFND++EEGDATWQV+ AL++
Sbjct: 388 LTVAEKDVAKLGRILEDVAATNLTLIQKNIWDPTVRRALLFNDQIEEGDATWQVLYALTK 447

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRS R   VS Q
Sbjct: 448 KLDRSRRTVRVSSQ 461

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496198|ref|XP_004160070.1| PREDICTED: LOW QUALITY PROTEIN: probable glucuronoxylan glucuronosyltransferase IRX7-like [Cucumis sativus]

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/74 (71%), Positives = 62/74 (83%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           +TVAEKD+  LG ILDHVA +NL+ IQKNLWDP  RRALLF+++VE+GDATWQVI ALS+
Sbjct: 386 ITVAEKDIGKLGRILDHVAGSNLTTIQKNLWDPRNRRALLFHNQVEDGDATWQVIGALSE 445

Query: 61  KLDRSYRRSEVSGQ 74
           KLDRSYRR  V  Q
Sbjct: 446 KLDRSYRRWRVLKQ 459

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541948|ref|XP_003539434.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Glycine max]

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/75 (69%), Positives = 64/75 (85%), Gaps = 1/75 (1%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLF-NDRVEEGDATWQVIRALS 59
           L+VAE+DV  LG IL+ VAATNLS+IQ+NLWDP  RRALLF N++V+EGDATWQV+ +LS
Sbjct: 380 LSVAERDVGKLGKILERVAATNLSVIQRNLWDPRTRRALLFNNNKVQEGDATWQVLVSLS 439

Query: 60  QKLDRSYRRSEVSGQ 74
           +KL RS RRS V+GQ
Sbjct: 440 EKLGRSQRRSSVAGQ 454

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547155|ref|XP_003541982.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Glycine max]

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 2/76 (2%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFND--RVEEGDATWQVIRAL 58
           LTVAE+DV  LG IL+ VAATNLS+IQK+LWDP  RRALLFN+  +VEEGDATWQV+ +L
Sbjct: 378 LTVAERDVGKLGKILERVAATNLSVIQKSLWDPGTRRALLFNNNKKVEEGDATWQVMVSL 437

Query: 59  SQKLDRSYRRSEVSGQ 74
           S+KL RSYRRS V  Q
Sbjct: 438 SEKLGRSYRRSLVGDQ 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570324|ref|NP_850113.2| exostosin-like protein [Arabidopsis thaliana] gi|75216857|sp|Q9ZUV3.1|IRX7_ARATH RecName: Full=Probable glucuronoxylan glucuronosyltransferase IRX7; AltName: Full=Protein FRAGILE FIBER 8; AltName: Full=Protein IRREGULAR XYLEM 7 gi|4063747|gb|AAC98455.1| hypothetical protein [Arabidopsis thaliana] gi|77022037|gb|ABA60868.1| putative glucuronyltransferase [Arabidopsis thaliana] gi|77022039|gb|ABA60869.1| putative glucuronyltransferase [Arabidopsis thaliana] gi|330252987|gb|AEC08081.1| exostosin-like protein [Arabidopsis thaliana]

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 1   LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
           LTVAE+DV  LG IL+HVAATNLS+IQ+NL DP VRRAL+FN    EGDATWQV+ ALS+
Sbjct: 376 LTVAERDVGKLGDILEHVAATNLSVIQRNLEDPSVRRALMFNVPSREGDATWQVLEALSK 435

Query: 61  KLDRSYRRS 69
           KL+RS RRS
Sbjct: 436 KLNRSVRRS 444

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
TAIR|locus:2046163	448	FRA8 "FRAGILE FIBER 8" [Arabid	0.932	0.154	0.724	1.7e-20
TAIR|locus:2172676	469	F8H "AT5G22940" [Arabidopsis t	1.0	0.157	0.613	1.4e-17
TAIR|locus:2016004	412	GUT2 "AT1G27440" [Arabidopsis	0.851	0.152	0.384	0.00025

TAIR|locus:2046163 FRA8 "FRAGILE FIBER 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query:     1 LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
             LTVAE+DV  LG IL+HVAATNLS+IQ+NL DP VRRAL+FN    EGDATWQV+ ALS+
Sbjct:   376 LTVAERDVGKLGDILEHVAATNLSVIQRNLEDPSVRRALMFNVPSREGDATWQVLEALSK 435

Query:    61 KLDRSYRRS 69
             KL+RS RRS
Sbjct:   436 KLNRSVRRS 444

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP;TAS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2172676 F8H "AT5G22940" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 46/75 (61%), Positives = 58/75 (77%)

Query:     1 LTVAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQ 60
             LTVAEKDV  L  +L+HVAATNLS IQ+NL +P  +RALL+N  ++EGDATW ++ +L +
Sbjct:   390 LTVAEKDVRNLRKVLEHVAATNLSAIQRNLHEPVFKRALLYNVPMKEGDATWHILESLWR 449

Query:    61 KLD-RSYRRSEVSGQ 74
             KLD RSYRRS V  Q
Sbjct:   450 KLDDRSYRRSRVLSQ 464

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IGI

TAIR|locus:2016004 GUT2 "AT1G27440" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 0.00025, P = 0.00025
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query:     3 VAEKDVATLGPILDHVAATNLSIIQKNLWDPDVRRALLFNDRVEEGDATWQVIRALSQKL 62
             VAEKDV  L  IL  +    +   Q+ L +P ++RA+LF    + GDA  Q++  L++KL
Sbjct:   325 VAEKDVPELDTILTSIPTEVILRKQRLLANPSMKRAMLFPQPAQPGDAFHQILNGLARKL 384

Query:    63 --DRS 65
               D+S
Sbjct:   385 PHDKS 389


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       74        74   0.00091  102 3  11 22  0.37    29
                                                     29  0.46    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  95 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.12u 0.10s 7.22t   Elapsed:  00:00:01
  Total cpu time:  7.12u 0.10s 7.22t   Elapsed:  00:00:01
  Start:  Sat May 11 07:34:58 2013   End:  Sat May 11 07:34:59 2013

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP

GO:0080116 "glucuronoxylan glucuronosyltransferase activity" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUV3	IRX7_ARATH	2, ., 4, ., 1, ., -	0.7246	0.9324	0.1540	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0001137701 SubName- Full=Putative uncharacterized protein; (462 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	99.46

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.46  E-value=2.4e-14  Score=111.80  Aligned_cols=65  Identities=26%  Similarity=0.329  Sum_probs=61.6

Q ss_pred             CcccccCcccH-HHHhhhhchhHHHHHHHhcCchhhhhhhcccC--CCCCchHHHHHHHHHHhhccccc
Q 039568            1 LTVAEKDVATL-GPILDHVAATNLSIIQKNLWDPDVRRALLFND--RVEEGDATWQVIRALSQKLDRSY   66 (74)
Q Consensus         1 V~V~e~DVp~L-k~IL~~i~~~~y~~~Qr~l~~~~vrrhf~~n~--p~~~yDafHmVL~sLw~kl~~~~   66 (74)
                      |+|+|+||+++ ++||.+|+.++|++||+++.+ .++|||+|+.  |++++|||||+++++|.++.+-.
T Consensus       392 V~v~~~~v~~~~~~iL~~i~~~~~~~m~~~v~~-~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~  459 (464)
T KOG1021|consen  392 VFVPEKDVPELIKNILLSIPEEEVLRMRENVIR-LVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR  459 (464)
T ss_pred             EEEEHHHhhhHHHHHHHhcCHHHHHHHHHHHHH-HHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence            57899999999 999999999999999999997 7999999998  99999999999999999998754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00