Citrus Sinensis ID: 039801

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
Protein Sequence
METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIKGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIEIDPASR
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccccccEEEEEEccccEEccEEEEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHccEccccccccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHcccccccccccccccccccEEEEEEEccEEEccEEEEEEEEEEccccEccccccc
Coil and Loop (DISEMBL)
metmkpksamsnkSKLAKTFQKVINLRTatkigsnngmgicmltsqnkfdqddddlfsikgskthgdpraRQRAVMEALVAKLFAGVTSIKAAYAELQMAqnpynseaihlADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKklnasgpisilENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLaakviepeaiftkpshryfVFQSFVCKTmlegfnfpnfsppnesqcfhkhsRDQYLNEFKKLQLVNVRQFlaqkpsssfaQFMRSKYLHLVHAKMecslfgnlnqrklinagecpdsaffTSFAEMARRVWLLHRLAfsldqpvsifqvprncrfsEVYMenvndesafsceivdstVDVRVNFTvvpgfkigKSLIQSQvylspvnvieidpasr
Flexible Loop (DISEMBL)
metmkpksamsnksklAKTFQKVINLRtatkigsnngmGICMLTSQNKFDQDDDDLFSIKgskthgdpraRQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKigksliqsqvylspvnvieidpasr
Low Complexity Region (SEG)
METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIKGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIEIDPASR
Disordered region (IsUnstruct)
******************TFQKVINLRTATKIGSNNGMGICMLT*****************************AVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITI***************************************PISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFS*****QCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIEI*****
Disordered Region (DISOPRED)
*********************KVIN*****************************************************LVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAIS**********************************************MKESEARSLK***********************************TSHFVQFLHFSLRSMTSFVKL*V***************VIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNES****KHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENV*******************NFTVVPGFKIGKSLIQSQVYLSPVN*********
Disordered Region (DISEMBL)
***************LAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIKGSK*********RAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGE*************QLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIEIDPASR
Disordered Region (DISPRO)
*************SKLAKTFQKVINLRTATKIGSNNGMGICML**********************GDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDE**********TVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIE******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIKGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVNVIEIDPASR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	466
255562500	465	conserved hypothetical protein [Ricinus	0.969	0.972	0.665	1e-174
224114617	452	predicted protein [Populus trichocarpa]	0.957	0.986	0.649	1e-168
224076928	451	predicted protein [Populus trichocarpa]	0.952	0.984	0.642	1e-163
357519091	573	hypothetical protein MTR_8g087400 [Medic	0.972	0.790	0.622	1e-162
356528342	461	PREDICTED: uncharacterized protein LOC10	0.965	0.976	0.616	1e-160
356512533	460	PREDICTED: uncharacterized protein LOC10	0.963	0.976	0.616	1e-157
449433629	465	PREDICTED: uncharacterized protein LOC10	0.963	0.965	0.619	1e-154
307136188	465	UNE1-like protein [Cucumis melo subsp. m	0.963	0.965	0.619	1e-154
297851350	459	hypothetical protein ARALYDRAFT_473140 [	0.939	0.954	0.584	1e-147
188509938	646	UNE1-like protein [Gossypium raimondii]	0.914	0.659	0.569	1e-141

>gi|255562500|ref|XP_002522256.1| conserved hypothetical protein [Ricinus communis] gi|223538509|gb|EEF40114.1| conserved hypothetical protein [Ricinus communis]

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 307/461 (66%), Positives = 375/461 (81%), Gaps = 9/461 (1%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDD--DLFS 58
           ME++K +S   NKSK+A+TFQKVINL+TATKI SNNG+GICMLTSQNKFDQD D   ++ 
Sbjct: 1   MESIKCRSIPGNKSKIARTFQKVINLKTATKIASNNGIGICMLTSQNKFDQDHDPATIYK 60

Query: 59  IKGSKTH-GDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVV 117
              S  H  D +A++RAV++ALVAKLFAG+T+IKAAYAELQMAQNPY+S+AI  AD+AVV
Sbjct: 61  THNSDKHKDDAKAKRRAVLDALVAKLFAGITTIKAAYAELQMAQNPYSSDAIQAADRAVV 120

Query: 118 DELKAISELKRSFLKKELD-LSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEA 176
           +ELK +SELKRSF K +LD LSPQVT+MLAEIQEQQS+MKTYEITIKKLE E E+K S+ 
Sbjct: 121 EELKLLSELKRSFFKNDLDHLSPQVTVMLAEIQEQQSMMKTYEITIKKLESETEVKVSDI 180

Query: 177 RSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKL 236
             LK++LD+SIA+NKSLEK LNASGP+S+ +N+Q S L+ +HFVQFLH +LRSM SFVK+
Sbjct: 181 SLLKKKLDESIAYNKSLEKTLNASGPLSMFDNIQFSVLNPTHFVQFLHSALRSMRSFVKM 240

Query: 237 LVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNES-- 294
           +VREME A WD++ A   IEP++ F+KP+HR FVF+SFV KTM EGFN PNF  PNE+  
Sbjct: 241 MVREMEIARWDIEAATNAIEPDSSFSKPTHRCFVFESFVSKTMFEGFNHPNFMLPNETPP 300

Query: 295 QCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLN 354
           Q  H HS + Y N+FKKL+  N + +L Q P+SSFA+F R+KYL LVHAKMECSLFGNLN
Sbjct: 301 QNNHYHS-EHYFNKFKKLKSANPKPYLTQNPTSSFARFTRAKYLQLVHAKMECSLFGNLN 359

Query: 355 QRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVN 414
           QRKL+N+G  P+SAFFT+F EMARRVW L+ LAFS  + VSIFQV +N RFSEVYME+V 
Sbjct: 360 QRKLVNSGGLPESAFFTAFLEMARRVWCLNLLAFSFGESVSIFQVSKNSRFSEVYMESVT 419

Query: 415 DESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSP 455
            ES    + VD+  D+RV FTVVPGFKIGK++IQSQVYLSP
Sbjct: 420 HESVLDTDGVDA--DLRVGFTVVPGFKIGKTVIQSQVYLSP 458

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114617|ref|XP_002316811.1| predicted protein [Populus trichocarpa] gi|222859876|gb|EEE97423.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/462 (64%), Positives = 363/462 (78%), Gaps = 16/462 (3%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIK 60
           MET+K +S  +NKSK+A+T QKVINL++AT+I SNNG+GIC+LT  NKFDQDD +     
Sbjct: 1   METIKCRSLTNNKSKIARTIQKVINLKSATRIASNNGIGICLLTPHNKFDQDDLNTTCKS 60

Query: 61  GSKTHG----DPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAV 116
            + T      D +A++RA++EAL+AKLFA +T+IKAAYAELQMAQNPY  +AI  ADQAV
Sbjct: 61  QNSTDNHKQKDAKAKRRAILEALLAKLFASITTIKAAYAELQMAQNPYCGDAIQAADQAV 120

Query: 117 VDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEA 176
           VDELK +SELKRSF K EL LSPQVT+MLAEIQEQQSLMKTYEITIKKLE + E+K S+ 
Sbjct: 121 VDELKQLSELKRSFFKNELHLSPQVTMMLAEIQEQQSLMKTYEITIKKLEADVEVKGSDV 180

Query: 177 RSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKL 236
            SLK+QLD++IAFNKS+EK+LNASGP+S+ +N+Q S L+ +HF Q LH++LRSM SFVKL
Sbjct: 181 GSLKKQLDEAIAFNKSIEKRLNASGPLSMFDNIQFSLLNPTHFAQLLHYTLRSMKSFVKL 240

Query: 237 LVREMESANWDLDLAAKVIEPEAI-FTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQ 295
           +VREME A+WD++ AAK IEPE I F KPSHR FVF+SF CKTMLEGFN PN     E Q
Sbjct: 241 MVREMEVAHWDIEAAAKAIEPENIVFAKPSHRCFVFESFACKTMLEGFNHPN----EEHQ 296

Query: 296 CFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQ 355
                S   Y  EFKK++ VN +QFL   P SSFA+F R+KYL LVHAK+ECSLFGNLNQ
Sbjct: 297 -----SEYYYFIEFKKIKSVNPKQFLTHNPDSSFARFTRAKYLQLVHAKLECSLFGNLNQ 351

Query: 356 RKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVND 415
           RKL+N+G  PDSAFF +F EMARR W L+ LAFS  + VSIFQV +NCRFS+VYME V  
Sbjct: 352 RKLVNSGGFPDSAFFNAFVEMARRAWALNLLAFSFGEDVSIFQVSKNCRFSDVYMEAVTQ 411

Query: 416 ESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVN 457
           +S    E  +S  D+RV FTVVPGFKIGK++IQSQVYLSPV+
Sbjct: 412 DSEL--ENPNSDTDLRVAFTVVPGFKIGKTVIQSQVYLSPVS 451

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076928|ref|XP_002305054.1| predicted protein [Populus trichocarpa] gi|222848018|gb|EEE85565.1| predicted protein [Populus trichocarpa]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/459 (64%), Positives = 359/459 (78%), Gaps = 15/459 (3%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDL-FSI 59
           MET+K +S  +NKSK+A+TFQKVINL+TAT+I SNNG+G+CMLT  NKFDQDD +  +  
Sbjct: 1   METIKCRSLPNNKSKIARTFQKVINLKTATRIASNNGIGMCMLTPHNKFDQDDSNTAYKP 60

Query: 60  KGSKTHGDPRARQRA--VMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVV 117
           + +  H    A+ +   V+EAL+AKLFA +T+IKA YAELQMAQNPY S+AI  +DQAVV
Sbjct: 61  QNTNNHKKKDAKAKRRAVLEALLAKLFASITTIKAGYAELQMAQNPYCSDAIQASDQAVV 120

Query: 118 DELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEAR 177
           DELK +S+LKRSF K ELDLSPQVT+MLAEIQEQQ LMKTYEITIKKLE   E+K S+  
Sbjct: 121 DELKQLSQLKRSFFKNELDLSPQVTMMLAEIQEQQGLMKTYEITIKKLEAGVEVKGSDIG 180

Query: 178 SLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLL 237
           SLK+QLD++IAFNKSLEK+LNASGP+S+ +N++ S L+ +HFVQFLH +LRS+ +FVKL+
Sbjct: 181 SLKKQLDEAIAFNKSLEKRLNASGPLSMFDNIRFSLLNPTHFVQFLHHALRSVRNFVKLM 240

Query: 238 VREMESANWDLDLAAKVIEPE-AIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQC 296
           V EME A WD++ AAK IEPE  +F  PSHR FVF+SFVCKTMLEGFN PN     E Q 
Sbjct: 241 VCEMEVARWDIEAAAKAIEPENTVFANPSHRCFVFESFVCKTMLEGFNHPN----EELQS 296

Query: 297 FHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQR 356
            H      Y  EFKKL+ +N +QFL Q P SSFA+F R+KYL LVHAKMECSLFGNLNQR
Sbjct: 297 EH-----YYFIEFKKLKSLNPKQFLTQNPDSSFARFTRAKYLQLVHAKMECSLFGNLNQR 351

Query: 357 KLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDE 416
           KL+N+G  PDSAFF +F EMARR+W L+ LAFS  + VSIFQV +NCRFS+VYME V  +
Sbjct: 352 KLVNSGGFPDSAFFNAFVEMARRLWALNLLAFSFGEDVSIFQVAKNCRFSDVYMEAVTQD 411

Query: 417 SAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSP 455
           S    E  ++  D+ V FTVVPGFKIGK++IQSQVYLSP
Sbjct: 412 SVL--ETTNADTDLLVAFTVVPGFKIGKTVIQSQVYLSP 448

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519091|ref|XP_003629834.1| hypothetical protein MTR_8g087400 [Medicago truncatula] gi|355523856|gb|AET04310.1| hypothetical protein MTR_8g087400 [Medicago truncatula]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 290/466 (62%), Positives = 369/466 (79%), Gaps = 13/466 (2%)

Query: 1   METMKPKSAMSNKSK-LAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDD---DL 56
           MET+KPKSAM+++SK  AKTFQKVI+L++ATKI SNNG  ICML S  K  +D+D   D 
Sbjct: 1   METVKPKSAMNSRSKKFAKTFQKVISLKSATKIASNNG--ICMLNSHLKVKEDEDPFTDH 58

Query: 57  FSIK-GSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQA 115
             +K  SK     + R +AVMEAL+A+LFAGVT+IKA+YAELQMAQ+PYN+++I  ADQA
Sbjct: 59  HQMKINSKNQHKNKVRNKAVMEALIARLFAGVTTIKASYAELQMAQHPYNNDSIQAADQA 118

Query: 116 VVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESE 175
           VVDEL+AISELKR FLKKELDLSPQVTIMLAEIQEQQS+MKTYEITIKKL+GE + ++S+
Sbjct: 119 VVDELRAISELKRRFLKKELDLSPQVTIMLAEIQEQQSIMKTYEITIKKLQGEVDARDSQ 178

Query: 176 ARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVK 235
             +L+++LD+ I+FNKSLEKKLN++  +S+  N++LS L+ +HFV FLH +LRS+ +FVK
Sbjct: 179 ISTLRKKLDECISFNKSLEKKLNSNASLSLFVNLELSMLNHTHFVYFLHHTLRSIRNFVK 238

Query: 236 LLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQ 295
           L++ EMESANWD++ A K I P A+FTKPSHR F F+SFVC TM EGFN+PNF   N+  
Sbjct: 239 LMIEEMESANWDVEAAVKFIHPNAVFTKPSHRCFAFESFVCITMFEGFNYPNFIVSNDP- 297

Query: 296 CFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQ 355
             H   ++ Y ++FK+L+ +N +Q+L   P+SSFA+F++SKYL +VHAKMECSLFGNLNQ
Sbjct: 298 -LHNIHQNHYFDKFKRLKSLNPKQYLENNPNSSFAKFLKSKYLQVVHAKMECSLFGNLNQ 356

Query: 356 RKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVND 415
           RKL+N+G  PDSAFF +FAEMA+RVW LH LA S  + VSIFQV +N RFSEVYME+V +
Sbjct: 357 RKLVNSGGYPDSAFFLAFAEMAKRVWTLHYLALSFQEDVSIFQVKKNTRFSEVYMESVTE 416

Query: 416 ESAFSCEIVDST----VDVRVNFTVVPGFKIGKSLIQSQVYLSPVN 457
           ES  +    DST     + RV FTVVPGF IGK++IQSQVYLS V+
Sbjct: 417 ESVSTSCSGDSTDSNSGEFRVVFTVVPGFNIGKTVIQSQVYLSLVD 462

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528342|ref|XP_003532763.1| PREDICTED: uncharacterized protein LOC100791207 [Glycine max]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 284/461 (61%), Positives = 363/461 (78%), Gaps = 11/461 (2%)

Query: 1   METMKPKSAMSNKSK-LAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSI 59
           METMKPKSA+SN+SK LAKTFQKV++LR+ATK+ SNNG  ICML S  K     +DLF+ 
Sbjct: 1   METMKPKSALSNRSKKLAKTFQKVMSLRSATKLASNNG--ICMLNSHLKVK---EDLFTD 55

Query: 60  KGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDE 119
           +  K H     + RA+MEAL+A+LFAGVT+IKAAYAELQMAQ+PYN+E+I  ADQAVVDE
Sbjct: 56  QNKKPH-QGNNKNRAIMEALIARLFAGVTTIKAAYAELQMAQHPYNNESIQAADQAVVDE 114

Query: 120 LKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSL 179
           L+AISELKR FLK++LDLSPQVTIMLAEIQEQQSLMKTYEITIK+LE E + K++   SL
Sbjct: 115 LRAISELKRRFLKRDLDLSPQVTIMLAEIQEQQSLMKTYEITIKRLEAEVDFKDNNISSL 174

Query: 180 KRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVR 239
           K+ LD+ ++FNKSLEKKLN+SG +S+ +N+ LS+LS SHFV FLH SLRS+ SF K+++ 
Sbjct: 175 KKHLDECVSFNKSLEKKLNSSGSLSLFDNLTLSSLSPSHFVHFLHHSLRSVRSFSKIMIA 234

Query: 240 EMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHK 299
           EMESA+WDL+ A K I P A+F KP+H+ F F+SFVC TM EGFN+PNF+   +    ++
Sbjct: 235 EMESAHWDLEAAVKFIHPNAVFNKPTHQTFAFESFVCITMFEGFNYPNFNVQEDKNLHNQ 294

Query: 300 HSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLI 359
            + + Y ++FK+L+ +N +Q+L   P+SSF++F++SKYL +VHAKMECS FGNLNQRK++
Sbjct: 295 GAENLYFDKFKRLKSLNPKQYLTHNPNSSFSKFLKSKYLQVVHAKMECSFFGNLNQRKVV 354

Query: 360 NAGECPDSAFFTSFAEMARRVWLLHRLAFSL-DQPVSIFQVPRNCRFSEVYMENVNDESA 418
           N+G  PDS FF SFAEMA+RVW LH LA S  D  V++FQ+ +N RFSEVYME+V +ES 
Sbjct: 355 NSGGYPDSTFFISFAEMAKRVWALHCLALSFQDDDVTVFQIKKNSRFSEVYMESVTEESV 414

Query: 419 ---FSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPV 456
                     S+ ++RV FTVVPGFKIGK++IQSQVYLS V
Sbjct: 415 SPSAGESSDSSSGELRVGFTVVPGFKIGKTVIQSQVYLSLV 455

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512533|ref|XP_003524973.1| PREDICTED: uncharacterized protein LOC100795349 [Glycine max]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/461 (61%), Positives = 364/461 (78%), Gaps = 12/461 (2%)

Query: 1   METMKPKSAMSNKSK-LAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSI 59
           METMKPKSA++N+SK LAKTFQKVI+LR+ATK+ SNNG  ICML S  K  +D   LF+ 
Sbjct: 1   METMKPKSALNNRSKKLAKTFQKVISLRSATKLASNNG--ICMLNSHLKVKED---LFTD 55

Query: 60  KGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDE 119
           + +K H     + RAVMEAL+A+LFAGVT+IKAAYAELQMAQ+PYN+++I  ADQAVVDE
Sbjct: 56  QNNKPH-QGNNKNRAVMEALIARLFAGVTTIKAAYAELQMAQHPYNNDSIQAADQAVVDE 114

Query: 120 LKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSL 179
           L+AISELKR FLKKELDLSP VTIMLAEIQEQQSLMKTYEITIK+LE E + K++   SL
Sbjct: 115 LRAISELKRRFLKKELDLSPHVTIMLAEIQEQQSLMKTYEITIKRLEAEVDFKDNNISSL 174

Query: 180 KRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVR 239
           K+ LDD + FNKS+EKKLN+SG +S+ +N+ LS+LS +HFV FLH +LRS+ SF K+++ 
Sbjct: 175 KKHLDDCVNFNKSIEKKLNSSGSLSLFDNLTLSSLSPTHFVHFLHHTLRSVRSFSKVMMA 234

Query: 240 EMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHK 299
           EMESA+WDL+ A K I   A+FTKP+H+ F F+SFVC TM EGFN+PNF+   E +  HK
Sbjct: 235 EMESAHWDLEAAVKFIHSNAVFTKPTHQTFAFESFVCITMFEGFNYPNFNVA-EDKILHK 293

Query: 300 H-SRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKL 358
             ++  Y ++FKK++ +N +Q+L   P+SSF++F++SKYL +VHAKMECS FGNLNQRK+
Sbjct: 294 QGAQSLYFDKFKKVKSLNPKQYLTHNPNSSFSKFLKSKYLQVVHAKMECSFFGNLNQRKV 353

Query: 359 INAGECPDSAFFTSFAEMARRVWLLHRLAFSL-DQPVSIFQVPRNCRFSEVYMENVNDE- 416
           +N+G  P+S+FF +FAEMA+RVW LH LA S  D  V++FQ+ +N RFSEVYME+V +E 
Sbjct: 354 VNSGGYPESSFFVAFAEMAKRVWTLHCLALSFQDDDVTVFQIKKNTRFSEVYMESVTEEP 413

Query: 417 -SAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPV 456
            S        S+ ++RV FTVVPGFKIGK++IQSQVYLS V
Sbjct: 414 VSHSGESSDSSSGELRVGFTVVPGFKIGKTVIQSQVYLSLV 454

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433629|ref|XP_004134600.1| PREDICTED: uncharacterized protein LOC101220727 [Cucumis sativus] gi|449479213|ref|XP_004155537.1| PREDICTED: uncharacterized protein LOC101226803 [Cucumis sativus]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/468 (61%), Positives = 363/468 (77%), Gaps = 19/468 (4%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIK 60
           MET+KPK +  +K++ AKTFQKVI+LR AT+I S+NG  IC+L S NKF +D     SI 
Sbjct: 1   METIKPKPSKKSKTRFAKTFQKVISLRNATRIASSNG--ICVLVSHNKFKEDS----SIH 54

Query: 61  GSK------THGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQ 114
           G K      T  D +AR RAVMEALVAKLFA VTSIKAAYAELQMAQ+PYNS+AI  ADQ
Sbjct: 55  GGKSQIFERTEEDVKARNRAVMEALVAKLFASVTSIKAAYAELQMAQSPYNSDAIQAADQ 114

Query: 115 AVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKES 174
           AVVDELK ISELKRSFLKKELDLSPQVT+ML+EIQEQQSLMKTYEITIKKL+ E+E K+S
Sbjct: 115 AVVDELKVISELKRSFLKKELDLSPQVTLMLSEIQEQQSLMKTYEITIKKLQAESEQKDS 174

Query: 175 EARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFV 234
              +LK++L +SI+FNKSLEKKLNASG +S+ +N+Q   L+ +HF QFLH++LRS+ +FV
Sbjct: 175 GIVALKKKLGESISFNKSLEKKLNASGSLSMFDNLQFPLLNPTHFAQFLHYTLRSIRNFV 234

Query: 235 KLLVREMESANWDLDLAAK-VIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNF-PNFSPPN 292
           KL++REMESA+WDL+ A + +++ +  F +P+HR F F+SFVCKTM EGF    NF   N
Sbjct: 235 KLMIREMESASWDLNAAVQCIVDSDTKFPEPTHRSFAFESFVCKTMFEGFTADANFILHN 294

Query: 293 ESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGN 352
           +S    K    Q   +FKKL+ VN + F++Q P+S FA+F RSKYL LVHAKMECSLFGN
Sbjct: 295 DSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSKYLQLVHAKMECSLFGN 354

Query: 353 LNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMEN 412
           LNQRK++N+G  PD+ FF +FAEM++RVWLL  LAFSL   V+IFQV +N RFSEVYM+ 
Sbjct: 355 LNQRKILNSGGVPDTTFFAAFAEMSKRVWLLRCLAFSLHNDVTIFQVRKNSRFSEVYMQC 414

Query: 413 VNDESAFS-CEIVDSTV----DVRVNFTVVPGFKIGKSLIQSQVYLSP 455
           V +E+ FS  ++ DS V    + RV FTVVPGFKIG++++QS+VYLSP
Sbjct: 415 VTEETLFSPADMNDSAVGSGSEPRVRFTVVPGFKIGETVVQSRVYLSP 462

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136188|gb|ADN34027.1| UNE1-like protein [Cucumis melo subsp. melo]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/468 (61%), Positives = 363/468 (77%), Gaps = 19/468 (4%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIK 60
           MET+KPK +  +K++ AKTFQKVINLR AT+I S+NG  IC+L S NKF +D     SI 
Sbjct: 1   METIKPKPSKKSKTRFAKTFQKVINLRNATRIASSNG--ICVLVSHNKFKEDS----SIH 54

Query: 61  GSKTH------GDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQ 114
           G K+        D +AR RAVMEALVAKLFA VTSIKAAYAELQMAQ+PYNSEAIH ADQ
Sbjct: 55  GGKSQIFERNEEDVKARNRAVMEALVAKLFASVTSIKAAYAELQMAQSPYNSEAIHAADQ 114

Query: 115 AVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKES 174
           AVVDELK ISELKRSFLKKELDLSPQVT ML+EIQEQQSLMKTYEITIKKL+ E+E K+S
Sbjct: 115 AVVDELKVISELKRSFLKKELDLSPQVTFMLSEIQEQQSLMKTYEITIKKLQAESEQKDS 174

Query: 175 EARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFV 234
              +LK++L +SI+FNKSLEKKLNASG +S+ +N+Q   L+ +HF QFLH++LRS+ +FV
Sbjct: 175 GIVALKKKLGESISFNKSLEKKLNASGSLSMFDNLQFPLLNPTHFAQFLHYTLRSIRNFV 234

Query: 235 KLLVREMESANWDLDLAAK-VIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNF-PNFSPPN 292
           KL++REMESA+WDL+ A + +++ +  F +P+HR F F+SFVCKTM EGF    NF   +
Sbjct: 235 KLMIREMESASWDLNAAVQCIVDSDTKFPEPTHRSFAFESFVCKTMFEGFTADANFILHH 294

Query: 293 ESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGN 352
           +S    K    Q   +F KL+ VN + F++Q P+S+FA+F RSKYL LVHAKMECSLFGN
Sbjct: 295 DSLPHDKQLNHQMFEKFMKLKPVNPKIFISQNPNSTFAKFTRSKYLQLVHAKMECSLFGN 354

Query: 353 LNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMEN 412
           LNQRK++N+G  PD+ FF +FAEM++RVWLL  LAFSL   V+IFQV +N RFSEVYM+ 
Sbjct: 355 LNQRKILNSGGVPDTTFFAAFAEMSKRVWLLRCLAFSLHNDVTIFQVRKNSRFSEVYMQC 414

Query: 413 VNDESAFS-CEIVDSTV----DVRVNFTVVPGFKIGKSLIQSQVYLSP 455
           V +E+ FS  ++ DS V    + RV FTVVPGFKIG++++QS+VYLSP
Sbjct: 415 VTEETLFSPADMNDSAVGSGSEPRVRFTVVPGFKIGETVVQSRVYLSP 462

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851350|ref|XP_002893556.1| hypothetical protein ARALYDRAFT_473140 [Arabidopsis lyrata subsp. lyrata] gi|297339398|gb|EFH69815.1| hypothetical protein ARALYDRAFT_473140 [Arabidopsis lyrata subsp. lyrata]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/474 (58%), Positives = 346/474 (72%), Gaps = 36/474 (7%)

Query: 1   METMKPKSAMSNKSKLAKTFQKVINLRT-ATKIGSNNGMGICMLTSQN-KFDQDDDD--- 55
           MET+K   ++  KSKLA+TFQKV NLRT +TK+ SNNG+GICML SQN  F+ +DDD   
Sbjct: 1   METLKKNPSVRRKSKLARTFQKVCNLRTTSTKVSSNNGIGICMLKSQNPNFNDEDDDGDS 60

Query: 56  LFSIKGSKTHGDP----RARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHL 111
           +F +K + +        R R+RAV+EA+VAK+FA  TSIKAAYAELQMAQ PY+++AI  
Sbjct: 61  VFDLKSTSSSRSEEIKVRERRRAVLEAVVAKIFASTTSIKAAYAELQMAQRPYDNDAIQA 120

Query: 112 ADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEM 171
           AD AVV+EL+A+SELKRSFL+KEL+LSPQV IMLAEIQEQQSLM+TYEITIKKLE E   
Sbjct: 121 ADTAVVEELRALSELKRSFLRKELNLSPQVAIMLAEIQEQQSLMRTYEITIKKLEFEVTE 180

Query: 172 KESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMT 231
           K+ +   LK  LD+++  NKSLEKKL ASG IS  +N+Q+S L+ S FVQ L F+LRS+ 
Sbjct: 181 KKLKIDELKMSLDENLVMNKSLEKKLTASGSISAFDNIQISNLNLSQFVQVLGFTLRSVR 240

Query: 232 SFVKLLVREMESANWDLDLAA------KVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNF 285
           SFVKL+V+EMESA+WDLD A        V     +F +PSHR F F+SFVC  M E F  
Sbjct: 241 SFVKLIVKEMESASWDLDAAGSAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFES 300

Query: 286 PNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKM 345
           P+FS           SR+    EF+ ++ V+  Q+L + P SSFA F+  KYL +VHAKM
Sbjct: 301 PDFS-----------SRE----EFENVRSVDPIQYLTRNPGSSFASFVVHKYLSVVHAKM 345

Query: 346 ECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRF 405
           ECS FGNLNQRKL+N+G  PDS FF +F EMA+R+WLLH LAFSL + V++FQ+ R CRF
Sbjct: 346 ECSFFGNLNQRKLVNSGGFPDSGFFATFCEMAKRIWLLHCLAFSLSENVTVFQLKRGCRF 405

Query: 406 SEVYMENV--NDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVN 457
           S+VYME+V   DES FS +      D+RV FTVVPGFKIG+++IQSQVYLSPVN
Sbjct: 406 SQVYMESVKSGDESIFSGD----NSDIRVGFTVVPGFKIGENVIQSQVYLSPVN 455

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|188509938|gb|ACD56624.1| UNE1-like protein [Gossypium raimondii]

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/458 (56%), Positives = 333/458 (72%), Gaps = 32/458 (6%)

Query: 4   MKPKSA----MSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSI 59
           MKP+SA      NK+KLA+TFQ+VINLRTA+KI S NG+GI                   
Sbjct: 1   MKPRSAPNNGTHNKNKLARTFQRVINLRTASKIASTNGVGI------------------- 41

Query: 60  KGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDE 119
            G+ +HGD   +++A ++AL+A +FA VTSIKAAYAELQMAQ+PY+ EAI +ADQAVV++
Sbjct: 42  -GTYSHGDD-VKRKAGLKALIAMVFASVTSIKAAYAELQMAQHPYDGEAIQVADQAVVEQ 99

Query: 120 LKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSL 179
           LK +SELK  FLK++LDLSPQVT+MLAEIQEQQS+M+TY+ITIK LE + E K+S     
Sbjct: 100 LKVLSELKHKFLKQDLDLSPQVTLMLAEIQEQQSMMRTYDITIKNLESDIEEKDSAIDLH 159

Query: 180 KRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVR 239
            +QL+  IAFNKS+EKKLN +GP+ + +N+Q + L+ SHF+Q LH +L+S+ SFV+L+++
Sbjct: 160 HKQLEHCIAFNKSMEKKLNETGPLFMFDNIQFTTLNPSHFIQVLHCALKSVRSFVRLMMK 219

Query: 240 EMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHK 299
           EME A WD+  A K IEP A+  K SH  F+F+SFVCKTML+GF+  +FS     +  H 
Sbjct: 220 EMELAKWDIVAATKAIEPSAMLAKQSHACFLFESFVCKTMLQGFDSHDFSG---LKSLH- 275

Query: 300 HSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLI 359
             R+QY N FK L+  N + FL Q P S FA+F+R KYL LVH KMECS FGNLNQRK++
Sbjct: 276 --REQYFNAFKTLKSANPKSFLVQNPKSGFAKFIRDKYLKLVHPKMECSFFGNLNQRKMV 333

Query: 360 NAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAF 419
            +G   D+AFF +F EM RR WLLH L  S+   VS+FQV +  RFSEVYMENV++ES F
Sbjct: 334 ISGGFSDTAFFMAFTEMGRRFWLLHCLGLSMSDQVSVFQVMKGYRFSEVYMENVSEESIF 393

Query: 420 SCEIVDST-VDVRVNFTVVPGFKIGKSLIQSQVYLSPV 456
             EIVD   VD RV FTVVPGFKIGK++IQSQVYLSPV
Sbjct: 394 IDEIVDGADVDFRVGFTVVPGFKIGKTVIQSQVYLSPV 431

Source: Gossypium raimondii

Species: Gossypium raimondii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	466
TAIR|locus:2030012	459	UNE1 "AT1G29300" [Arabidopsis	0.939	0.954	0.584	1.5e-131
TAIR|locus:2086365	475	AT3G14870 "AT3G14870" [Arabido	0.965	0.947	0.465	1.3e-102
TAIR|locus:2009670	453	AT1G53380 "AT1G53380" [Arabido	0.954	0.982	0.441	2.2e-96
TAIR|locus:2050891	425	AT2G45260 "AT2G45260" [Arabido	0.813	0.891	0.401	8.6e-72
TAIR|locus:2101891	499	AT3G60680 "AT3G60680" [Arabido	0.785	0.733	0.326	7.2e-52
TAIR|locus:2124326	270	AT4G34080 "AT4G34080" [Arabido	0.557	0.962	0.369	3.2e-42
TAIR|locus:2119226	292	AT4G33320 "AT4G33320" [Arabido	0.568	0.907	0.357	8.7e-40
TAIR|locus:2045442	157	AT2G32130 "AT2G32130" [Arabido	0.330	0.980	0.549	1.4e-39
TAIR|locus:2154583	559	GIL1 "AT5G58960" [Arabidopsis	0.648	0.540	0.310	8.3e-26
TAIR|locus:2064432	519	AT2G30380 "AT2G30380" [Arabido	0.399	0.358	0.289	2.6e-19

TAIR|locus:2030012 UNE1 "AT1G29300" [Arabidopsis thaliana (taxid:3702)]

 Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
 Identities = 277/474 (58%), Positives = 349/474 (73%)

Query:     1 METMKPKSAMSNKSKLAKTFQKVINLRT-ATKIGSNNGMGICMLTSQN-KFDQDDDD--- 55
             MET+K   ++  KSKLA+TFQKV NLRT +TK+ SNNG+GICML SQN  FD +DDD   
Sbjct:     1 METLKKNPSVRRKSKLARTFQKVCNLRTTSTKVSSNNGIGICMLKSQNPNFDDEDDDGDS 60

Query:    56 LFSIKG--SKTHGD--PRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHL 111
             +F +K   S   G+   R R RAV++A+VAK+FA  TSIKAAYAELQMAQ PY+++AI  
Sbjct:    61 VFDLKSTSSSRSGEIKVRERNRAVLQAVVAKIFASTTSIKAAYAELQMAQRPYDNDAIQA 120

Query:   112 ADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEM 171
             AD AVV+EL+A+SELKRSFL+KEL+LSPQV IMLAEIQEQQSLM+TYEITIKKLE E   
Sbjct:   121 ADTAVVEELRALSELKRSFLRKELNLSPQVAIMLAEIQEQQSLMRTYEITIKKLEFEVTE 180

Query:   172 KESEARSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMT 231
             K+ +   LK   ++S+  NKSLEKKL+ASG +S+ +N+++  L+ S FVQ L F+LRS+ 
Sbjct:   181 KQLKIDELKMSFEESLVVNKSLEKKLSASGSVSVFDNIEIRNLNLSSFVQVLGFTLRSVR 240

Query:   232 SFVKLLVREMESANWDLDLAAK------VIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNF 285
             SFVKL+V+EMESA+WDLD AA       V     +F +PSHR F F+SFVC  M E F  
Sbjct:   241 SFVKLIVKEMESASWDLDAAASAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFGA 300

Query:   286 PNFSPPNESQCFHKHSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKM 345
             P+FS            R+    EF+KL+ V+  Q+L + P SSFA+F+  KYL +VHAKM
Sbjct:   301 PDFS-----------RRE----EFEKLRSVDPIQYLTRNPGSSFARFVVHKYLSVVHAKM 345

Query:   346 ECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRF 405
             ECS FGNLNQRKL+N+G  PDS FF +F EMA+R+WLLH LAFSL   V++FQ+ R CRF
Sbjct:   346 ECSFFGNLNQRKLVNSGGFPDSGFFATFCEMAKRIWLLHCLAFSLSGNVTVFQLKRGCRF 405

Query:   406 SEVYMENVN--DESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLSPVN 457
             S+VYME+V   DES FS    D++ D+RV FTVVPGFKIG+++IQSQVYL+PVN
Sbjct:   406 SQVYMESVKSGDESLFSG---DNS-DIRVGFTVVPGFKIGENVIQSQVYLTPVN 455

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2086365 AT3G14870 "AT3G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
 Identities = 217/466 (46%), Positives = 315/466 (67%)

Query:     1 METMKPKSAMSN-KSKLAKTFQKVINLRTATKI---GSNNGMGICMLTSQNKFDQD-DDD 55
             ME++KP   +S+ K KL +TF KVIN++  T +   G+N    +     + K D+D   +
Sbjct:     5 MESVKPLDVVSSGKGKLRRTFAKVINMKKLTGVVPEGNNKVERVKKSQEKVKLDKDLAKN 64

Query:    56 LFSIKGSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQA 115
               ++  S    +    +R  MEAL+AKLFA ++SIK+ YA+LQ AQ+PY+   I  AD  
Sbjct:    65 AANLSESFDKLEEEYEKRLAMEALLAKLFATISSIKSGYAQLQYAQSPYDPNGIQKADNL 124

Query:   116 VVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESE 175
             VV ELK +SELK+SFLKK+LD +P  T++LAEIQE +S++KTYEI  KKLE + ++K+SE
Sbjct:   125 VVAELKTLSELKQSFLKKQLDPNPDRTLVLAEIQELRSVLKTYEIMGKKLECQLKLKDSE 184

Query:   176 ARSLKRQLDDSIAFNKSLEKKLNASGPIS--ILENVQLSALSTSHFVQFLHFSLRSMTSF 233
                LK +  +S+  NK +EK+LN SG +   +  N+ LSA+S++HFV +LH +++S+  F
Sbjct:   185 IIFLKEKFQESMTQNKLMEKRLNQSGQLCNPLDHNLHLSAVSSTHFVTYLHHTVKSIRGF 244

Query:   234 VKLLVREMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNE 293
             VKL+V +M+ A WD+D+AA++I+P+ ++ K  H+ F  + +VCK MLE F  P FS  NE
Sbjct:   245 VKLMVEQMKLAAWDIDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFS--NE 302

Query:   294 SQCFHKHSRDQ---YLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLF 350
             S    K SR+    +   F +L+ +  R++LA +P S  A+F R+KYL L+H KME + F
Sbjct:   303 SS--KKTSREDKAMFFERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQAFF 360

Query:   351 GNLNQRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYM 410
             G+L+QR  + AGE P+++  T+F EMA+RVWLLH LAFS D   SIFQV R CRFSEVYM
Sbjct:   361 GHLHQRNQVTAGEFPETSLCTAFLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSEVYM 420

Query:   411 ENVNDESAFSCEIVDSTVDVR--VNFTVVPGFKIGKSLIQSQVYLS 454
             ++V++E+ FS E  +S+ +    V FTVVPGF+IGK+ IQ +VYLS
Sbjct:   421 KSVSEEAFFSPEQEESSSETEPGVAFTVVPGFRIGKTTIQCEVYLS 466

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009670 AT1G53380 "AT1G53380" [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 203/460 (44%), Positives = 295/460 (64%)

Query:     1 METMKPKSAMSNKSKLAKTFQKVINLRTATKIGSNNGMGICMLTSQNKFDQDDDDLFSIK 60
             MET++P       +KL + F KV+N+   T +     M       + KFD     L S  
Sbjct:     1 METVRPMVVAPKGNKLRRKFAKVLNIHKLTGVAPEGEM------KKIKFDSKTAKL-SES 53

Query:    61 GSKTHGDPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDEL 120
               K   +    Q   +EAL+AKLFA V+SIKAAYA+LQ +Q+PY+S  I  AD  VV EL
Sbjct:    54 FYKLEEEYERSQG--LEALLAKLFATVSSIKAAYAQLQHSQSPYDSIGIQKADNLVVAEL 111

Query:   121 KAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLK 180
             K +SELK+ F+KK++D +P+ T++LAEIQE +SL+KTYEI  KKLE + ++K+SE   L+
Sbjct:   112 KTLSELKQCFMKKQVDPNPERTLVLAEIQELRSLLKTYEIMGKKLESQYKLKDSEIIFLR 171

Query:   181 RQLDDSIAFNKSLEKKLNASGPI-SILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVR 239
              +LD+S+  NK  EK+LN SG + + L+N+ LSAL+ +HFV +LH +++S   FVKL++ 
Sbjct:   172 EKLDESMKQNKLTEKRLNQSGQLCNPLDNLHLSALNPTHFVTYLHHTVKSTRGFVKLMIE 231

Query:   240 EMESANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHK 299
             +M+ A WD+  AA  I P   + K  H+ F F+ FV   M E F+ P FS  +ES+ + K
Sbjct:   232 QMKLAGWDISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKK 291

Query:   300 HS-----RDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLN 354
                    R+ +   FK+L+ +  + +L  +P S FA+F R+KYL L+H KME + FG+L+
Sbjct:   292 KKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAFFGHLH 351

Query:   355 QRKLINAGECPDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVN 414
              R  ++AGE P+++ F+ F EMA+R+WLLH LA S ++   IF+VP+ CRFSEVYM++V 
Sbjct:   352 LRNQVSAGEFPETSLFSGFLEMAKRIWLLHCLALSFEREAEIFRVPKGCRFSEVYMKSVA 411

Query:   415 DESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQSQVYLS 454
             +E+ F         + RV FTVVPGF+IGK+ IQ +VYLS
Sbjct:   412 EEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006857 "oligopeptide transport" evidence=RCA

TAIR|locus:2050891 AT2G45260 "AT2G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 159/396 (40%), Positives = 238/396 (60%)

Query:    76 MEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLK--- 132
             MEAL++ LF  ++S+K+AY ELQ A  PY+ E I  AD+ V+ ELK +SE+K  + +   
Sbjct:    36 MEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYRENNP 95

Query:   133 KELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKS 192
             K + +SPQ + + AEIQEQQSL+KTYE+ +KK + E + K+SE   + ++++++      
Sbjct:    96 KPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLK 155

Query:   193 LEKKLNASGPISILE------NVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANW 246
             LEK L   G +S  E      N+Q   L+T  +V     + +++  F K L+  M++A W
Sbjct:   156 LEKNLKLRG-MSTNEGSNGDGNMQFPDLTTELYVSTYEAAAKAVHDFSKPLINMMKAAGW 214

Query:   247 DLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKHS-RDQY 305
             DLD AA  IEP+ ++ K  H+ + F+S++C+ M  GF   NFS  +ES     +   D +
Sbjct:   215 DLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTF 274

Query:   306 LNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECP 365
               +F  L+ ++    L   P S+F  F RSKYL LVH KME S FGNL+QR  +  G  P
Sbjct:   275 FRQFLALKDMDPLDALGTNPDSNFGIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGGGHP 334

Query:   366 DSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVD 425
              +AF+ +F ++A+ +W+LHRLA+S D    IFQV +   FS+ YME+V         +VD
Sbjct:   335 RTAFYQAFLKLAKSIWILHRLAYSFDPAAKIFQVKKGSEFSDSYMESVVKNI-----VVD 389

Query:   426 STVD-VRVNFTVVPGFKIGKSLIQSQVYLSPVNVIE 460
                +  RV   V+PGF IG S+IQS+VY+S V V+E
Sbjct:   390 EKEENPRVGLMVMPGFWIGGSVIQSRVYVSGVKVLE 425

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2101891 AT3G60680 "AT3G60680" [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 126/386 (32%), Positives = 205/386 (53%)

Query:    78 ALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSF--LKKEL 135
             +L++ +FA  +S +A+Y +LQ A  P+  E +  AD+A+V  L+ +S+LK+ +   ++ L
Sbjct:   120 SLISSVFATASSFEASYLQLQAAHAPFVEENVKAADRALVSNLQKLSDLKQFYRNYRQSL 179

Query:   136 DLSPQVTI---MLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKS 192
             D    + I   + + +QE QS ++  E    +L+ E + K+ +  SL+ +L +       
Sbjct:   180 DFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKSTSK 239

Query:   193 LEKKLNASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAA 252
             L K+L+++  + +L +V++       F   L+ + ++   F K+L+  ME A WDLDL A
Sbjct:   240 LSKRLSSNSSLDVLLSVRV-------FESLLYDAFKATQKFTKILIELMEKAGWDLDLVA 292

Query:   253 KVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFS-PPNESQCFHKHSRDQYLNEFKK 311
             K + PE  + K  H  +   S+VC  M  GF+   F    N+ +   + S D  L E  +
Sbjct:   293 KSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSVDSSLRELMQ 352

Query:   312 LQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFT 371
                 N  + L +    +F++F   KY  L+H  M  S+F N+++ + + +     S F+ 
Sbjct:   353 HVSSNPMELLDRDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSLSTFYE 412

Query:   372 SFAEMARRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENV---NDESAFSCEIVDSTV 428
             SF  MA  +W LH+LA S D  V IFQV     FS V+MENV     +  FS     S  
Sbjct:   413 SFVTMASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDKKFSM----SPT 468

Query:   429 DVRVNFTVVPGFKIGKSLIQSQVYLS 454
               +V FTVVPGFKIG ++IQ QVYL+
Sbjct:   469 RAKVGFTVVPGFKIGCTVIQCQVYLT 494

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005777 "peroxisome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

TAIR|locus:2124326 AT4G34080 "AT4G34080" [Arabidopsis thaliana (taxid:3702)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 100/271 (36%), Positives = 156/271 (57%)

Query:    76 MEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLK--- 132
             MEAL++ LF  ++S+K+AY ELQ A  PY+ E I  AD+ V+ ELK +SE+K  + +   
Sbjct:     1 MEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYRENNP 60

Query:   133 KELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKS 192
             K + +SPQ + + AEIQEQQSL+KTYE+ +KK + E + K+SE   + ++++++      
Sbjct:    61 KPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLK 120

Query:   193 LEKKLNASGPISILE------NVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANW 246
             LEK L   G +S  +      N+Q   L+T  FV     + + +  F K L+  M++A W
Sbjct:   121 LEKNLKLRG-MSTNQGSGGDGNLQFPDLTTELFVSTYEAAAKVVHDFSKPLINMMKAAGW 179

Query:   247 DLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQC-FHKHSRDQY 305
             DLD AA  IEP+ ++ K  H+ + F+S++C+ M  GF   NFS  +ES         D +
Sbjct:   180 DLDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTF 239

Query:   306 LNEFKKLQLVNVRQFLAQKPSSSFAQFMRSK 336
               +F  L+ ++    L   P S+F  F RSK
Sbjct:   240 FRQFLALKDMDPLDALGTNPDSNFGIFCRSK 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2119226 AT4G33320 "AT4G33320" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 99/277 (35%), Positives = 156/277 (56%)

Query:    76 MEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLK--- 132
             MEAL++ LF  ++S+K+AY ELQ A  PY+ E I  AD+ V  ELK +SE+K S+ +   
Sbjct:    12 MEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLSEMKHSYRENNP 71

Query:   133 KELDLSPQVTIMLAEIQEQQSLMKTY-EITIKKLEGEAEMKESEARSLKRQLDDSIAFNK 191
             K + +SPQ + + AEIQEQQSL+KTY E+ +KK + E + K+SE   + ++++++     
Sbjct:    72 KPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANKKRL 131

Query:   192 SLEKKLNASGPISILE------NVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESAN 245
              LEK L   G +S  E      N+Q   L+T  FV     + +++  F K L+  M++A 
Sbjct:   132 KLEKNLKLRG-MSTNEGSGGDGNLQFPDLTTELFVSTYEVAAKAVHDFSKPLINMMKAAG 190

Query:   246 WDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQC-FHKHSRDQ 304
             WDLD AA  IEP+ ++ K  H+ + F+S++C+ M  GF   NFS  +ES         D 
Sbjct:   191 WDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDT 250

Query:   305 YLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLV 341
             +  +F  L+ ++    L   P S+   +   K   +V
Sbjct:   251 FFRQFLALKDMDPLDALGTNPDSNVRLYACQKVFVIV 287

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2045442 AT2G32130 "AT2G32130" [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/171 (54%), Positives = 121/171 (70%)

Query:    31 KIGSNNGMGICMLTSQN-KFDQDDDDLFSIKGSKTHGDPRARQRAVMEALVAKLFAGVTS 89
             K+ SNNG+G+    SQN  FD +DDD          GD       + +A+VAK+FA  TS
Sbjct:     3 KVSSNNGVGVGTFKSQNPNFDDEDDD----------GD------CLFKAVVAKIFASTTS 46

Query:    90 IKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQ 149
             IKAAYAELQ AQ+PY+S+AI  AD  VV+ELK +SELKRSF++KEL+LSP+V IMLAEI 
Sbjct:    47 IKAAYAELQRAQSPYDSDAIQAADTVVVNELKTLSELKRSFMRKELNLSPKVAIMLAEIH 106

Query:   150 EQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNAS 200
             EQQSLM+TYEI +K+LE E   K+ +   LK  L++++  NKSLEKKL A+
Sbjct:   107 EQQSLMRTYEIAMKRLEFEVTEKKVKIDELKMNLEENLVMNKSLEKKLTAT 157

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2154583 GIL1 "AT5G58960" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 8.3e-26, P = 8.3e-26
 Identities = 100/322 (31%), Positives = 161/322 (50%)

Query:   146 AEIQEQQSLMKTYEITIKKLEGE---AEMKESEARSLKRQLDDSIAFNKSLEKKLNASGP 202
             A ++E +  +K  +  I+ L+ +   A M        K +L  S   N + +  ++    
Sbjct:   244 AVVKELKKEVKVKDTEIENLKEKVKVASMANGNGGK-KHRLLSSRKVNCTTQIAVSPVPE 302

Query:   203 ISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLD-LAAKVIEPEAIF 261
             +  +  +Q+   S S F   L   +R+    +   VR +E+A+   D ++A         
Sbjct:   303 LFEMTMIQVKEASKS-FTGILLSLMRAAHWDIAAAVRSIEAASASSDGMSASSFASSVQS 361

Query:   262 TKPS-HRYFVFQSFVCKTMLEGFNFPNFSPPNE-SQCFH--KHSRDQYLNEFKKLQLVNV 317
             + P+ H  F  +S++C+ + +GF+   F      S   +  ++ RD +  +FK ++ ++ 
Sbjct:   362 SVPNQHAKFALESYICRKIFQGFDHETFYMDGSLSSLINPDQYRRDCFA-QFKDMKAMDP 420

Query:   318 RQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMA 377
              + L   P+  F +F   KYL ++H KME SLFG+  QR+L+ AG  P S F+  F  +A
Sbjct:   421 MELLGILPTCHFGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAGNHPRSQFYGEFLGLA 480

Query:   378 RRVWLLHRLAFSLDQPVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVV 437
             + VWLLH LAFSLD   S F+  R   F   YME+V     FS   V +   V V F V 
Sbjct:   481 KAVWLLHLLAFSLDPSPSHFEANRGAEFHSQYMESV---VRFSDGRVPAG-QV-VGFPVC 535

Query:   438 PGFKI---GK-SLIQSQVYLSP 455
             PGFK+   GK S+I+S+VYL P
Sbjct:   536 PGFKLSHQGKGSIIKSRVYLVP 557

GO:0003674 "molecular_function" evidence=ND

GO:0009639 "response to red or far red light" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2064432 AT2G30380 "AT2G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
 Identities = 59/204 (28%), Positives = 106/204 (51%)

Query:    80 VAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSP 139
             ++KLF  V+S+K AY E Q A  PY+ + I  AD  VV +L+A+  +KR +LK  + L+ 
Sbjct:    76 ISKLFDIVSSLKLAYLEFQQAHLPYDPDKIIEADNLVVSQLEALRRIKRLYLKT-IQLNA 134

Query:   140 QVTIMLAEIQEQQSL-MKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLN 198
             + T + A   ++    ++  E  ++KL+ +   KESE  SL ++ +  +A N+ LE ++ 
Sbjct:   135 KKTEIAASCLDRLRYEIEVNEKHLEKLKAQVRAKESEIHSLIKKQECLVAENRKLENRI- 193

Query:   199 ASGPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDLAAKVIEPE 258
                            +S S F      + +S+  F K L+  M++ +W+L+ A + I   
Sbjct:   194 ---------------VSVSSFEFAFRAASKSVHDFAKPLITLMKATDWNLEKAVESIVGN 238

Query:   259 AIFTKPSHRYFVFQSFVCKTMLEG 282
               F K S + + F+S++ + M  G
Sbjct:   239 VTFAKTSDKKYAFESYIVRRMFHG 262

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	466
pfam04859	132	pfam04859, DUF641, Plant protein of unknown functi	3e-49

>gnl|CDD|191114 pfam04859, DUF641, Plant protein of unknown function (DUF641)

 Score =  164 bits (417), Expect = 3e-49
 Identities = 69/131 (52%), Positives = 92/131 (70%)

Query: 67  DPRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISEL 126
           +   +    MEAL+AKLFA V+S+KAAYA+LQ A +PY+ E I  AD AVV ELK +SEL
Sbjct: 2   ESDNQNAQAMEALIAKLFANVSSLKAAYAQLQQAHSPYDPEKIQAADAAVVAELKKLSEL 61

Query: 127 KRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDS 186
           KR + +K    +PQ  I+ AEIQEQ+SL+KTYEI +KKLE E   K+SE  SL+ +L++ 
Sbjct: 62  KRRYRRKRQKGAPQDAILAAEIQEQRSLLKTYEIMVKKLEAEVRAKDSEIDSLREKLEEL 121

Query: 187 IAFNKSLEKKL 197
           +  N  LEK+L
Sbjct: 122 LVANSKLEKRL 132

Plant protein of unknown function. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	466
PF04859	131	DUF641: Plant protein of unknown function (DUF641)	100.0
PF10205	102	KLRAQ: Predicted coiled-coil domain-containing pro	92.25
PRK09039	343	hypothetical protein; Validated	91.02
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	89.08
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	88.84
COG0497	557	RecN ATPase involved in DNA repair [DNA replicatio	88.37
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	85.0
PF08614	194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	84.81
PRK10869	553	recombination and repair protein; Provisional	83.7
smart00787	312	Spc7 Spc7 kinetochore protein. This domain is foun	80.88

>PF04859 DUF641: Plant protein of unknown function (DUF641); InterPro: IPR006943 This conserved region is found in a number of plant proteins of unknown function

Probab=100.00  E-value=1.1e-47  Score=343.68  Aligned_cols=130  Identities=57%  Similarity=0.773  Sum_probs=127.3

Q ss_pred             hhHhhHHHHHHHHHHHHHhHhhHHHHHHHHHHhcCCCCchHHhHhhHHHHHHHHHhHHHHHHHhhccCCCChhhHHHHHH
Q 039801           68 PRARQRAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAE  147 (466)
Q Consensus        68 ~~~~~~~~~eali~~lFa~VSslKaAY~qLQ~Ah~PydpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~ae  147 (466)
                      ++.++.++++++|++|||+||+||+||+|||+||+|||||+|++||++||+||++||+||++|++++.+++|+.+++.++
T Consensus         2 ~~~~~~~~~eali~~lFa~VSalKaAY~qLQ~Ah~PyDpd~I~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~a~   81 (131)
T PF04859_consen    2 EEAQRAAAMEALIAKLFATVSALKAAYAQLQQAHSPYDPDKIQAADEAVVSELRRLSELKRRYRKKQSDPSPQVARLAAE   81 (131)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccc
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 039801          148 IQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKL  197 (466)
Q Consensus       148 i~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl  197 (466)
                      |+|||++|+|||++++|||+|+++||+||..||++|+++.+.|++|||||
T Consensus        82 ~~e~qsli~~yE~~~~kLe~e~~~Kdsei~~Lr~~L~~~~~~n~~Lekrl  131 (131)
T PF04859_consen   82 IQEQQSLIKTYEIVVKKLEAELRAKDSEIDRLREKLDELNRANKSLEKRL  131 (131)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999996

>PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif

Probab=92.25  E-value=0.71  Score=40.73  Aligned_cols=57  Identities=19%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 039801          142 TIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLN  198 (466)
Q Consensus       142 ~~l~aei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl~  198 (466)
                      +-|.|+...+...+-++..-..+|..+++.||..|..+.++++.+.-+|..|++|+.
T Consensus         8 sKLraQ~~vLKKaVieEQ~k~~~L~e~Lk~ke~~LRk~eqE~dSL~FrN~QL~kRV~   64 (102)
T PF10205_consen    8 SKLRAQNQVLKKAVIEEQAKNAELKEQLKEKEQALRKLEQENDSLTFRNQQLTKRVE   64 (102)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            347788888888888888888999999999999999999999999999999999964

This domain is found in a family of coiled-coil domain-containing proteins that are conserved from nematodes to humans. These proteins also contain a C-terminal TTKRSYEDQ motif domain (IPR019348 from INTERPRO). The function of these proteins is not known.

>PRK09039 hypothetical protein; Validated

Probab=91.02  E-value=6.8  Score=41.00  Aligned_cols=65  Identities=15%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             HHhHHHHHHHhhccCCCChhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q 039801          121 KAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAF  189 (466)
Q Consensus       121 ~~Ls~LK~~y~~~~~~~~~~~~~l~aei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~  189 (466)
                      +.|.+.|..|...    .|+...|-++|..++.-+..-+..+..+|.+.+..+..|..|+++|+.+...
T Consensus       123 ~~L~~~k~~~se~----~~~V~~L~~qI~aLr~Qla~le~~L~~ae~~~~~~~~~i~~L~~~L~~a~~~  187 (343)
T PRK09039        123 QELDSEKQVSARA----LAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQ  187 (343)
T ss_pred             HHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3678888777764    5778889999999888888888888888888888888888888888766543

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=89.08  E-value=30  Score=35.74  Aligned_cols=121  Identities=18%  Similarity=0.230  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHhHhhHHHHHHHHHHhcCCCCchHHhHhhHHHHHHHHHhHHHHHHHhh-----ccCCCC--hhhHHHH
Q 039801           73 RAVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLK-----KELDLS--PQVTIML  145 (466)
Q Consensus        73 ~~~~eali~~lFa~VSslKaAY~qLQ~Ah~PydpdkI~aAD~~vVsEL~~Ls~LK~~y~~-----~~~~~~--~~~~~l~  145 (466)
                      ....+.+...|-..+..|+.-|..|..        .+...|.++-.=..+.+.|+.....     .+....  -....+.
T Consensus       144 ~~ll~gl~~~L~~~~~~L~~D~~~L~~--------~~~~l~~~~~~l~~~~~~L~~e~~~Lk~~~~e~~~~D~~eL~~lr  215 (325)
T PF08317_consen  144 MQLLEGLKEGLEENLELLQEDYAKLDK--------QLEQLDELLPKLRERKAELEEELENLKQLVEEIESCDQEELEALR  215 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCHHHHHHHH
Confidence            456677888888888888888888754        3344443332211233333332221     111111  1235566


Q ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhhccCC
Q 039801          146 AEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASG  201 (466)
Q Consensus       146 aei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl~~s~  201 (466)
                      +++.++..-+......+.+|+.++...+.+|..+.++..++...=..+++.+..+.
T Consensus       216 ~eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~~eI~e~~~~~~~~r  271 (325)
T PF08317_consen  216 QELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELLAEIAEAEKIREECR  271 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            66777777777777777888888888888888888888888877777777665443

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=88.84  E-value=0.45  Score=43.70  Aligned_cols=53  Identities=17%  Similarity=0.239  Sum_probs=35.3

Q ss_pred             CceeEEecCCCcccccccccccccccccccccCCCCCceEEEEecCCceeCCeEEE-EEEE
Q 039801          393 PVSIFQVPRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQ-SQVY  452 (466)
Q Consensus       393 ~a~IF~V~rG~~F~~~YMEsV~~~~~~~~~~~~~~~~~~VgFtV~PGFkVg~tVIk-crVY  452 (466)
                      .+..+.+. |..|||.+||-|.....      +...+..|.=.+.|||++|+.||+ ++|-
T Consensus       109 Gv~~i~~~-G~~FDp~~heav~~~~~------~~~~~~~I~~v~~~GY~~~~rvlRpA~V~  162 (165)
T PF01025_consen  109 GVEEIEPV-GEPFDPNLHEAVETVPD------PDKEPGTIVEVVRPGYRLGGRVLRPAEVV  162 (165)
T ss_dssp             TEEEE--T-SSB--TTTEEEEEEECS------SSS-CTBEEEECC-EEEETTEEEE-EEEE
T ss_pred             CCEecCCC-CCCCCHHHheeheecCc------CCCCcCeEEEEEecCEEECCEEeeeeEEE
Confidence            56667777 99999999999876442      123456788899999999999886 4443

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]

Probab=88.37  E-value=6.2  Score=44.09  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=44.7

Q ss_pred             HhHhhHHHHHHHHHHh---------cCCCCchHHhHhhHHHHHHHHHhHHHHHHHhhccCCCChhhHHHHHHHHHHHhhh
Q 039801           85 AGVTSIKAAYAELQMA---------QNPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLSPQVTIMLAEIQEQQSLM  155 (466)
Q Consensus        85 a~VSslKaAY~qLQ~A---------h~PydpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~~~~~~l~aei~e~q~l~  155 (466)
                      +.+..+-.||.+|+.|         .++|||+.+..-    -+=|..|..|+|.|....    +.......++++.-..|
T Consensus       266 ~~~~~l~ea~~~l~ea~~el~~~~~~le~Dp~~L~~v----e~Rl~~L~~l~RKY~~~~----~~l~~~~~~~~~el~~L  337 (557)
T COG0497         266 ELAELLEEALYELEEASEELRAYLDELEFDPNRLEEV----EERLFALKSLARKYGVTI----EDLLEYLDKIKEELAQL  337 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH----HHHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHh
Confidence            3345556688888876         469999987653    333556666776666542    22233444555544445


Q ss_pred             hHHHHHHHHHHHHHhh
Q 039801          156 KTYEITIKKLEGEAEM  171 (466)
Q Consensus       156 ~tye~~~~kLe~e~~~  171 (466)
                      ...+.-.+.|+.++..
T Consensus       338 ~~~~~~~~~Le~~~~~  353 (557)
T COG0497         338 DNSEESLEALEKEVKK  353 (557)
T ss_pred             hhhhhHHHHHHHHHHH
Confidence            4555555555554433

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=85.00  E-value=5.5  Score=44.62  Aligned_cols=59  Identities=20%  Similarity=0.212  Sum_probs=50.7

Q ss_pred             hhHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 039801          140 QVTIMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLN  198 (466)
Q Consensus       140 ~~~~l~aei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl~  198 (466)
                      ..+.++++-||++|-+..|-..+++|+.++-.|..|+.+||..++.++..-+.|-.+-+
T Consensus        94 EL~ele~krqel~seI~~~n~kiEelk~~i~~~q~eL~~Lk~~ieqaq~~~~El~~~n~  152 (907)
T KOG2264|consen   94 ELTELEVKRQELNSEIEEINTKIEELKRLIPQKQLELSALKGEIEQAQRQLEELRETNN  152 (907)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence            45678999999999999999999999999999999999999999888776666554433

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=84.81  E-value=1.7  Score=41.57  Aligned_cols=114  Identities=24%  Similarity=0.244  Sum_probs=29.6

Q ss_pred             HHHHHhHhhHHHHHHHHHHh-------c-------CCCCchHHhHhhHHHHHHHHHhHHHHHHHhhccCCCC-------h
Q 039801           81 AKLFAGVTSIKAAYAELQMA-------Q-------NPYNSEAIHLADQAVVDELKAISELKRSFLKKELDLS-------P  139 (466)
Q Consensus        81 ~~lFa~VSslKaAY~qLQ~A-------h-------~PydpdkI~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~-------~  139 (466)
                      .+|++.++.++..=..||..       |       .|-.+..|..-+..++.--..|+++.   +.+ ....       .
T Consensus        27 ~~L~d~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~l~~ELael~---r~~-~el~~~L~~~~~  102 (194)
T PF08614_consen   27 NRLADRTSLLKAENEQLQPEAESLPSSSSSSPSESGSVSSAQISSLEQKLAKLQEELAELY---RSK-GELAQQLVELND  102 (194)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc-cccccccccccc
Confidence            67888899999888888862       1       22233344444444444333455543   322 1111       1


Q ss_pred             hhHHHHHH-------HHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 039801          140 QVTIMLAE-------IQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLN  198 (466)
Q Consensus       140 ~~~~l~ae-------i~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl~  198 (466)
                      ....+.++       |.+++..+...+.-++.|+.+++.|+.-+..|+.++..+.-.+..+|+|+.
T Consensus       103 ~l~~l~~~~~~~~~~l~~l~~~~~~L~~~~~~l~~~l~ek~k~~e~l~DE~~~L~l~~~~~e~k~~  168 (194)
T PF08614_consen  103 ELQELEKELSEKERRLAELEAELAQLEEKIKDLEEELKEKNKANEILQDELQALQLQLNMLEEKLR  168 (194)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11223333       334444444444445555566666666666666666666666666776654

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. This entry represents auotphagy protein 16 (Apg16), which is required for the function of the Apg12p-Apg5p conjugate.; PDB: 3A7O_D 3A7P_B.

>PRK10869 recombination and repair protein; Provisional

Probab=83.70  E-value=15  Score=40.81  Aligned_cols=136  Identities=17%  Similarity=0.204  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHhcCCCCchHHhHhh--HHHHHHHHHhHHHHHHHhhccCCCChh-hHHHHHHHHHHHhhhhHHHHHHHHHH
Q 039801           90 IKAAYAELQMAQNPYNSEAIHLAD--QAVVDELKAISELKRSFLKKELDLSPQ-VTIMLAEIQEQQSLMKTYEITIKKLE  166 (466)
Q Consensus        90 lKaAY~qLQ~Ah~PydpdkI~aAD--~~vVsEL~~Ls~LK~~y~~~~~~~~~~-~~~l~aei~e~q~l~~tye~~~~kLe  166 (466)
                      +..+.-.|+.. .=|||+-=..++  +-+..+|+.++.-=+.|... .+..|. ...++.++..++.|-|-|...+..+-
T Consensus       246 l~~~~~~l~~~-~~~d~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~-~~~dp~~l~~ie~Rl~~l~~L~rKyg~~~~~~~  323 (553)
T PRK10869        246 LYSAKQLLSEL-IGMDSKLSGVLDMLEEALIQIQEASDELRHYLDR-LDLDPNRLAELEQRLSKQISLARKHHVSPEELP  323 (553)
T ss_pred             HHHHHHHHHHH-hhhCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            44555566555 567765322222  22334455554444455542 233343 36677778888888888875544443


Q ss_pred             HHHhhhHHHH---HHHHHHHHHHHHhhhhhhhhhccCCCCccchhhhcccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 039801          167 GEAEMKESEA---RSLKRQLDDSIAFNKSLEKKLNASGPISILENVQLSALSTSHFVQFLHFSLR-SMTSFVKLLVREME  242 (466)
Q Consensus       167 ~e~~~Kdsei---~~Lr~~L~e~~~~n~~lekrl~~s~~ls~~~~l~~s~~sp~~F~~~l~~A~~-Si~~F~K~Li~~M~  242 (466)
                      .-.+.-..|+   ......++++...-..+.+++...+                   ..++.+|+ +...|.+.+..+|+
T Consensus       324 ~~~~~l~~eL~~L~~~e~~l~~Le~e~~~l~~~l~~~A-------------------~~LS~~R~~aA~~l~~~v~~~L~  384 (553)
T PRK10869        324 QHHQQLLEEQQQLDDQEDDLETLALAVEKHHQQALETA-------------------QKLHQSRQRYAKELAQLITESMH  384 (553)
T ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322222222   2222233333333333333332211                   34444444 48899999999998


Q ss_pred             hcCC
Q 039801          243 SANW  246 (466)
Q Consensus       243 ~agw  246 (466)
                      .-|-
T Consensus       385 ~L~m  388 (553)
T PRK10869        385 ELSM  388 (553)
T ss_pred             HcCC
Confidence            7664

>smart00787 Spc7 Spc7 kinetochore protein

Probab=80.88  E-value=75  Score=33.08  Aligned_cols=120  Identities=17%  Similarity=0.166  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHhHhhHHHHHHHHHHhcCCCCchHHhHhhHHHHHHHHHhHHHHHHHhh-----ccCCC--ChhhHHHHH
Q 039801           74 AVMEALVAKLFAGVTSIKAAYAELQMAQNPYNSEAIHLADQAVVDELKAISELKRSFLK-----KELDL--SPQVTIMLA  146 (466)
Q Consensus        74 ~~~eali~~lFa~VSslKaAY~qLQ~Ah~PydpdkI~aAD~~vVsEL~~Ls~LK~~y~~-----~~~~~--~~~~~~l~a  146 (466)
                      ...+-|...|-..+..|+..|..|        ...++.+|.++-.=.++...|+.....     .+...  +.....+.+
T Consensus       140 kllegLk~~L~~~~~~l~~D~~~L--------~~~~~~l~~~~~~l~~~~~~L~~e~~~L~~~~~e~~~~d~~eL~~lk~  211 (312)
T smart00787      140 KLLEGLKEGLDENLEGLKEDYKLL--------MKELELLNSIKPKLRDRKDALEEELRQLKQLEDELEDCDPTELDRAKE  211 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhCCHHHHHHHHH
Confidence            445666777777777777777665        234444444333222233333332221     01000  111233334


Q ss_pred             HHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhhccCC
Q 039801          147 EIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKSLEKKLNASG  201 (466)
Q Consensus       147 ei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~~n~~lekrl~~s~  201 (466)
                      +|.++..-+...-..+..++.|+....+.|....++..++...=+.+++.++.+.
T Consensus       212 ~l~~~~~ei~~~~~~l~e~~~~l~~l~~~I~~~~~~k~e~~~~I~~ae~~~~~~r  266 (312)
T smart00787      212 KLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQCR  266 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4444444444444455666666777777777777776666666666666655554

This domain is found in cell division proteins which are required for kinetochore-spindle association.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	466
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 8e-10
 Identities = 73/465 (15%), Positives = 145/465 (31%), Gaps = 131/465 (28%)

Query: 7   KSAMSNKSKLAKTFQKV-------INLRTATKIGS-----NNGMGICMLTSQNKFDQDDD 54
           K+ ++    L+   Q         +NL+      +          +      N +    D
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK---LLYQIDPN-WTSRSD 218

Query: 55  DLFSIKGSKTHGDPRAR----QRAVMEAL----------VAKLFAG-----VTSIKAAYA 95
              +IK          R     +     L              F       +T+      
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 96  ELQMAQNPYNSEAIHLADQAVVDELKAIS----ELKRSFLKKE-LDLSPQVTIMLAE-IQ 149
           +   A    +    H +     DE+K++     + +   L +E L  +P+   ++AE I+
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338

Query: 150 EQQSLMKTYE-ITIKKLEGEAEM-----KESEARSLKRQLDDSIAFNKSLEKKLNASGPI 203
           +  +    ++ +   KL    E      + +E R +  +L  S+ F  S    +    P 
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL--SV-FPPSA--HI----PT 389

Query: 204 SILENV--QLSALSTSHFVQFLH-FSL-----RSMTSFVKLLVREMESANWDLDLAAKVI 255
            +L  +   +        V  LH +SL     +  T  +  +          L+L  K+ 
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---------YLELKVKLE 440

Query: 256 EPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKH--------SRDQYLN 307
              A+     HR  V   +    + + F+  +  PP   Q F+ H           + + 
Sbjct: 441 NEYAL-----HRSIV-DHY---NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 308 EFKKLQLVNVRQFLAQK----------PSS--------------------SFAQFMRS-- 335
            F+ + L + R FL QK            S                     + + + +  
Sbjct: 492 LFRMVFL-DFR-FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549

Query: 336 KYLHLVHAKMECSLFGNLNQRKLINAGECPDSAFFTSFAEMARRV 380
            +L  +   + CS + +L +  L+      D A    F E  ++V
Sbjct: 550 DFLPKIEENLICSKYTDLLRIALMA----EDEAI---FEEAHKQV 587

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 9e-07
 Identities = 58/358 (16%), Positives = 107/358 (29%), Gaps = 90/358 (25%)

Query: 94  YAELQMAQNPY-NSEAIHLADQAVVDEL--KAISELKRSFL-KKELD---LSP----QVT 142
           + + +  ++ Y   + + + + A VD    K + ++ +S L K+E+D   +S        
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 143 IMLAEIQEQQS----------LMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIAFNKS 192
            +   +  +Q           L   Y+  +  ++ E        R    Q D     N+ 
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 193 LEKKLNAS--GPISILENVQLSALSTSHFVQFLHFSLRSMTSFVKLLVREMESANWDLDL 250
              K N S   P   L    L  L  +  V  +      +    K          W   +
Sbjct: 126 F-AKYNVSRLQPYLKLRQA-LLELRPAKNV-LID----GVLGSGK---------TW---V 166

Query: 251 AAKVIEPEAIFTKPSHRYFVFQSF-----VCKT------MLEGFNFPNFSPPNESQCFHK 299
           A  V     +          F+ F      C +      ML+   +    P   S+  H 
Sbjct: 167 ALDVCLSYKV-----QCKMDFKIFWLNLKNCNSPETVLEMLQKLLY-QIDPNWTSRSDHS 220

Query: 300 HSRDQYLNEFKKLQLVNVRQFLAQKPSSSFAQFMRSKYLHLVHAKMECSLFGNLNQRKLI 359
            +    ++  +      +R+ L  KP      +     L LV       L  N+   K  
Sbjct: 221 SNIKLRIHSIQA----ELRRLLKSKP------YENC--L-LV-------L-LNVQNAKAW 259

Query: 360 NA--GECP------DSAFFTSFAEMARRVWLL--HRLAFSLDQPVSIFQVPRNCRFSE 407
           NA    C               +        L  H +  + D+  S+     +CR  +
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 3e-06
 Identities = 59/319 (18%), Positives = 110/319 (34%), Gaps = 85/319 (26%)

Query: 188 AFNKSLEKKLNASGPISILENVQLSAL----STSHFVQFLHFSLRSM-TSFVKLLVREME 242
           AF  + + K     P SIL   ++  +            L ++L S     V+  V E+ 
Sbjct: 28  AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87

Query: 243 SANWDLDLAAKVIEPEAIFTKPSHRYFVFQSFVCKTMLEGFNFPNFSPPNESQCFHKH-- 300
             N+   L +  I+ E    +PS    ++     +              N++Q F K+  
Sbjct: 88  RINYKF-LMSP-IKTEQR--QPSMMTRMYIEQRDRLY------------NDNQVFAKYNV 131

Query: 301 SRDQYLNEFKK--LQL-----VNV-------RQFLAQKPSSSFAQFMRSKYLHLVHAKME 346
           SR Q   + ++  L+L     V +       + ++A            S   + V  KM+
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA-------LDVCLS---YKVQCKMD 181

Query: 347 CSLFGNLNQRKLINAGEC--PDSAFFTSFAEMARRVWLLHRLAFSLDQPVSIFQ-VPRNC 403
             +F        +N   C  P++       EM ++  LL+++  +          +    
Sbjct: 182 FKIF-------WLNLKNCNSPETVL-----EMLQK--LLYQIDPNWTSRSDHSSNIKLRI 227

Query: 404 --------RF--SEVY------MENVNDES---AF--SCEIVDSTVDVRVNFTVVPGFKI 442
                   R   S+ Y      + NV +     AF  SC+I+ +T   +V   +      
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287

Query: 443 GKSLIQSQVYLSPVNVIEI 461
             SL    + L+P  V  +
Sbjct: 288 HISLDHHSMTLTPDEVKSL 306

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 47.6 bits (112), Expect = 1e-06
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 21/48 (43%)

Query: 150 EQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDS---IAFNKSLE 194
           E+Q+        +KKL+           SLK   DDS   +A   ++E
Sbjct: 18  EKQA--------LKKLQA----------SLKLYADDSAPALAIKATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	466
1zxa_A	67	CGMP-dependent protein kinase 1, alpha isozyme; pa	95.02
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	94.93
1t6f_A	37	Geminin; coiled-coil, cell cycle; 1.47A {Synthetic	84.37

>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}

Probab=95.02  E-value=0.024  Score=45.19  Aligned_cols=46  Identities=26%  Similarity=0.252  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 039801          143 IMLAEIQEQQSLMKTYEITIKKLEGEAEMKESEARSLKRQLDDSIA  188 (466)
Q Consensus       143 ~l~aei~e~q~l~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~~  188 (466)
                      .+....++.+..++..+..+..||.+++.||.||..||.+|+...+
T Consensus         8 ~~~~~~e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs   53 (67)
T 1zxa_A            8 STSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQS   53 (67)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             cchHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556678889999999999999999999999999999999987755

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=94.93  E-value=0.034  Score=44.86  Aligned_cols=33  Identities=24%  Similarity=0.328  Sum_probs=28.0

Q ss_pred             hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 039801          155 MKTYEITIKKLEGEAEMKESEARSLKRQLDDSI  187 (466)
Q Consensus       155 ~~tye~~~~kLe~e~~~Kdsei~~Lr~~L~e~~  187 (466)
                      ++..+..++.||.++..||++|..|+.+|+...
T Consensus        35 Lr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr   67 (72)
T 3nmd_A           35 LRQRDALIDELELELDQKDELIQMLQNELDKYR   67 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            466677789999999999999999999998763

>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1

Probab=84.37  E-value=1.2  Score=31.35  Aligned_cols=25  Identities=32%  Similarity=0.412  Sum_probs=21.9

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHH
Q 039801          163 KKLEGEAEMKESEARSLKRQLDDSI  187 (466)
Q Consensus       163 ~kLe~e~~~Kdsei~~Lr~~L~e~~  187 (466)
                      +||..++..||.||.+||++=.++.
T Consensus        10 ekLhk~ie~KdeeIa~Lk~eN~eL~   34 (37)
T 1t6f_A           10 EKLHKEIEQKDNEIARLKKENKELA   34 (37)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            6899999999999999999876653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	466
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	89.83

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=89.83  E-value=0.13  Score=38.00  Aligned_cols=51  Identities=12%  Similarity=0.118  Sum_probs=37.4

Q ss_pred             cCCCcccccccccccccccccccccCCCCCceEEEEecCCceeCCeEEE-EEEEeecC
Q 039801          400 PRNCRFSEVYMENVNDESAFSCEIVDSTVDVRVNFTVVPGFKIGKSLIQ-SQVYLSPV  456 (466)
Q Consensus       400 ~rG~~F~~~YMEsV~~~~~~~~~~~~~~~~~~VgFtV~PGFkVg~tVIk-crVYLs~~  456 (466)
                      ..|..|||.+||-|.....      +...+-.|.=.+-+|++++++||+ ++|-++..
T Consensus         6 ~~g~~FDP~~HeAv~~~~~------~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~   57 (59)
T d1dkga1           6 ETNVPLDPNVHQAIAMVES------DDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA   57 (59)
T ss_dssp             CCSSBCCTTSEEEEEEEEC------SSSCTTBEEEEEECEEEETTEEEECEEEEEEEC
T ss_pred             CCCCCCCHHHceEeeEecC------CCCCCCEEEEEEeCCcEECCEEeeccEEEEecC
Confidence            4589999999999866432      122334677799999999999887 56766643