Citrus Sinensis ID: 039814

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
NLEQHKHNAHTHVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKPSLQ
cccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccccccc
cHHHcccccccEEEEHHHHHHHHHHHHccccccccHHHHcccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHEHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
nleqhkhnahthvynfSSLRLRVQNLsnslnypptirilhkntmissvkhtpfsastdflpkkrfltptlkfsplpiiqnsifnnkfssekplhisstqnltfspkEQQKELKTQCNayeadrsrpldinieVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNkkvlnafpypwltsTLSLACGSLMMLVSWATRIaeapktdlEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRflfgetlpmpvymsllpIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIfskkgmkgksvggmNYYACLSMMSLLILTpfaiavegpqmWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYnqvsymsldqispltfsiGNTMKRISVIVSSIIIfhtpvqpvnALGAAIAILGTFIYSQFLVQDLGiyvtkskpslq
nleqhkhnahthvynfssLRLRVQNLSNSLNYPPTIRILHKNTMISSVKhtpfsastdflpKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNayeadrsrpldINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKPSLQ
NLEQHKHNAHTHVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFskkgmkgksvggmNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRisvivssiiiFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKPSLQ
**********THVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPIIQNSIFNN*****************************************LDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVT*******
************************************************************************************************************************************************RLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ******************
*********HTHVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLTFS***********CNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKPSLQ
NL***KHNAHTHVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPII************************************************************RFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQD*************
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NLEQHKHNAHTHVYNFSSLRLRVQNLSNSLNYPPTIRILHKNTMISSVKHTPFSASTDFLPKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKPSLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query454 2.2.26 [Sep-21-2011]
Q94B38388 Glucose-6-phosphate/phosp yes no 0.795 0.930 0.822 1e-174
Q9M5A9388 Glucose-6-phosphate/phosp no no 0.746 0.873 0.801 1e-158
Q9LF61417 Xylulose 5-phosphate/phos no no 0.667 0.726 0.535 1e-89
O81514277 Glucose-6-phosphate/phosp no no 0.508 0.833 0.592 3e-78
P21727402 Triose phosphate/phosphat N/A no 0.640 0.723 0.43 2e-65
P49131408 Triose phosphate/phosphat N/A no 0.729 0.811 0.389 1e-64
P52177407 Triose phosphate/phosphat N/A no 0.627 0.700 0.442 1e-64
Q9ZSR7410 Triose phosphate/phosphat no no 0.627 0.695 0.431 5e-64
Q9FTT3417 Triose phosphate/phosphat no no 0.704 0.767 0.397 7e-64
P11869404 Triose phosphate/phosphat N/A no 0.640 0.720 0.426 1e-63
>sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 Back     alignment and function desciption
 Score =  610 bits (1574), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 311/378 (82%), Positives = 337/378 (89%), Gaps = 17/378 (4%)

Query: 63  KRFLTPTLKFSPLPIIQN----SIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNA 118
           +R +   LKFSPL II+N    S   N  S +KPLHISS  N        ++E+K +  A
Sbjct: 21  RRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF-------KREVKVE--A 71

Query: 119 YEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWL 178
           YEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWL
Sbjct: 72  YEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWL 127

Query: 179 TSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSF 238
           TSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSF
Sbjct: 128 TSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 187

Query: 239 THIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMIS 298
           THIIKSGEPAFSVLVSRF  GET P+PVY+SLLPIIGGCALAA+TELNFN+ GFMGAMIS
Sbjct: 188 THIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMIS 247

Query: 299 NLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQ 358
           NLAFVFRNIFSKKGMKGKSV GMNYYACLSMMSL+ILTPF+IAVEGPQMWAAGWQ A++Q
Sbjct: 248 NLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEGPQMWAAGWQNAVSQ 307

Query: 359 IGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQP 418
           +GPNFVWWV AQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIV+SIIIFHTP+QP
Sbjct: 308 VGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQP 367

Query: 419 VNALGAAIAILGTFIYSQ 436
           VNALGAAIAI GTF+YSQ
Sbjct: 368 VNALGAAIAIFGTFLYSQ 385
Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for dynamic acclimation of photosynthesis.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1 Back     alignment and function description
>sp|O81514|GPTP1_ARATH Glucose-6-phosphate/phosphate-translocator-like protein 1 OS=Arabidopsis thaliana GN=At4g03950 PE=3 SV=2 Back     alignment and function description
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query454
255554959399 Glucose-6-phosphate/phosphate translocat 0.854 0.972 0.828 0.0
224078664401 predicted protein [Populus trichocarpa] 0.856 0.970 0.823 1e-177
356548981391 PREDICTED: glucose-6-phosphate/phosphate 0.848 0.984 0.780 1e-176
356555638391 PREDICTED: glucose-6-phosphate/phosphate 0.848 0.984 0.780 1e-175
297840369388 glucose-6-phosphate/phosphate translocat 0.839 0.981 0.806 1e-174
3367515410 Similar to glucose-6-phosphate/phosphate 0.795 0.880 0.822 1e-172
18407336388 glucose-6-phosphate/phosphate translocat 0.795 0.930 0.822 1e-172
225444357393 PREDICTED: glucose-6-phosphate/phosphate 0.856 0.989 0.791 1e-172
14596173388 Similar to glucose-6-phosphate/phosphate 0.795 0.930 0.820 1e-171
147833196391 hypothetical protein VITISV_030812 [Viti 0.823 0.956 0.791 1e-169
>gi|255554959|ref|XP_002518517.1| Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis] gi|223542362|gb|EEF43904.1| Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/402 (82%), Positives = 361/402 (89%), Gaps = 14/402 (3%)

Query: 42  NTMISSVK--HTPFSASTDFLPKK-RFLTPTLKFSPLPIIQNS----IFNNKFSSEKPLH 94
           N MISS+   HT F  S+DFLP+K   L P  +FSPLPII NS    IFN+  SS+KPLH
Sbjct: 2   NAMISSLNYTHTTF-ISSDFLPRKTSLLKP--QFSPLPIIHNSHRNQIFNSSLSSDKPLH 58

Query: 95  ISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFAT 154
           ISS +N TFS K Q ++  T CNAYEADRSRPLDINIE+ DEQA    AQ++KIG+YFAT
Sbjct: 59  ISSLENFTFSKKNQSRDSLTVCNAYEADRSRPLDINIELPDEQA----AQKIKIGVYFAT 114

Query: 155 WWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLF 214
           WWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMML+SWAT++A+APKTD EFWK+LF
Sbjct: 115 WWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLISWATKVADAPKTDFEFWKTLF 174

Query: 215 PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPII 274
           PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFL G+T P+PV++SLLPII
Sbjct: 175 PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGQTFPLPVFLSLLPII 234

Query: 275 GGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLI 334
           GGCAL+A+TELNFN  GFMGAMISNLAFVFRNIFSKKGM GKSV GMNYYACLSM+SLLI
Sbjct: 235 GGCALSALTELNFNKTGFMGAMISNLAFVFRNIFSKKGMNGKSVSGMNYYACLSMLSLLI 294

Query: 335 LTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFS 394
           LTPFAIA+EGPQMWAAGWQ A+AQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFS
Sbjct: 295 LTPFAIAMEGPQMWAAGWQNAVAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFS 354

Query: 395 IGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436
           IGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTF+YSQ
Sbjct: 355 IGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQ 396

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224078664|ref|XP_002305598.1| predicted protein [Populus trichocarpa] gi|222848562|gb|EEE86109.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356548981|ref|XP_003542877.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356555638|ref|XP_003546137.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297840369|ref|XP_002888066.1| glucose-6-phosphate/phosphate translocator 2 [Arabidopsis lyrata subsp. lyrata] gi|297333907|gb|EFH64325.1| glucose-6-phosphate/phosphate translocator 2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|3367515|gb|AAC28500.1| Similar to glucose-6-phosphate/phosphate-translocator (GPT) gb|AF020814 from Pisum sativum [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18407336|ref|NP_564785.1| glucose-6-phosphate/phosphate translocator 2 [Arabidopsis thaliana] gi|325511333|sp|Q94B38.2|GPT2_ARATH RecName: Full=Glucose-6-phosphate/phosphate translocator 2, chloroplastic; Flags: Precursor gi|332195767|gb|AEE33888.1| glucose-6-phosphate/phosphate translocator 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225444357|ref|XP_002266056.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Vitis vinifera] gi|302144079|emb|CBI23184.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|14596173|gb|AAK68814.1| Similar to glucose-6-phosphate/phosphate-translocator [Arabidopsis thaliana] gi|20148301|gb|AAM10041.1| similar to glucose-6-phosphate/phosphate-translocator [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147833196|emb|CAN68645.1| hypothetical protein VITISV_030812 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query454
TAIR|locus:2036778388 GPT2 "glucose-6-phosphate/phos 0.837 0.979 0.753 7.4e-153
TAIR|locus:2160175388 GPT1 "glucose 6-phosphate/phos 0.744 0.871 0.742 2.9e-135
TAIR|locus:2151381417 AT5G17630 "AT5G17630" [Arabido 0.867 0.944 0.452 5.2e-81
TAIR|locus:2136713277 AT4G03950 "AT4G03950" [Arabido 0.337 0.552 0.579 3.7e-71
TAIR|locus:2161423415 APE2 "ACCLIMATION OF PHOTOSYNT 0.627 0.686 0.401 2.5e-58
UNIPROTKB|Q84QU8407 PPT2 "Phosphoenolpyruvate/phos 0.660 0.737 0.399 4.8e-55
UNIPROTKB|Q69VR7408 PPT1 "Phosphoenolpyruvate/phos 0.643 0.715 0.393 5.5e-54
UNIPROTKB|Q5VQL3393 PPT3 "Phosphoenolpyruvate/phos 0.691 0.798 0.358 5.6e-52
TAIR|locus:2084203383 PPT2 "phosphoenolpyruvate (pep 0.788 0.934 0.336 5.6e-52
TAIR|locus:2145944408 CUE1 "CAB UNDEREXPRESSED 1" [A 0.636 0.708 0.374 1.7e-50
TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
 Identities = 300/398 (75%), Positives = 326/398 (81%)

Query:    44 MISSVKHTPFSASTDFLPKKRFLTPT-LKFSPLPIIQN---SIFN-NKFSSEKPLHISST 98
             M+SS+K +  S ST      R   PT LKFSPL II+N     FN N  S +KPLHISS 
Sbjct:     1 MLSSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSA 60

Query:    99 QNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWAL 158
              N        ++E+K +  AYEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWAL
Sbjct:    61 SNF-------KREVKVE--AYEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWAL 107

Query:   159 NVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAV 218
             NVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAV
Sbjct:   108 NVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAV 167

Query:   219 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCA 278
             AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF  GET P+PVY+SLLPIIGGCA
Sbjct:   168 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCA 227

Query:   279 LAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPF 338
             LAA+TELNFN+ GFMGAMISNLAFVFRNIF             NYYACLSMMSL+ILTPF
Sbjct:   228 LAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPF 287

Query:   339 AIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNT 398
             +IAVEGPQMWAAGWQ A++Q+GPNFVWWV AQS+FYHLYNQVSYMSLDQISPLTFSIGNT
Sbjct:   288 SIAVEGPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNT 347

Query:   399 MKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQ 436
             MKR          FHTP+QPVNALGAAIAI GTF+YSQ
Sbjct:   348 MKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQ 385
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA
GO:0015297 "antiporter activity" evidence=ISS
GO:0015712 "hexose phosphate transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=ISS
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA
GO:0007276 "gamete generation" evidence=IMP
GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA
GO:0015713 "phosphoglycerate transport" evidence=IDA
GO:0015714 "phosphoenolpyruvate transport" evidence=IDA
GO:0015760 "glucose-6-phosphate transport" evidence=IDA
GO:0035436 "triose phosphate transmembrane transport" evidence=IDA
GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA
GO:0009744 "response to sucrose stimulus" evidence=IEP
GO:0009749 "response to glucose stimulus" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009624 "response to nematode" evidence=IEP
GO:0009643 "photosynthetic acclimation" evidence=IMP
GO:0010109 "regulation of photosynthesis" evidence=IMP
GO:0015979 "photosynthesis" evidence=IMP
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136713 AT4G03950 "AT4G03950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94B38GPT2_ARATHNo assigned EC number0.82270.79510.9304yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query454
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 1e-131
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 6e-76
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 1e-37
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 7e-08
pfam08449303 pfam08449, UAA, UAA transporter family 2e-04
pfam00892126 pfam00892, EamA, EamA-like transporter family 2e-04
TIGR00950260 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran 4e-04
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 0.001
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
 Score =  381 bits (980), Expect = e-131
 Identities = 147/293 (50%), Positives = 197/293 (67%), Gaps = 2/293 (0%)

Query: 146 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKT 205
           L+ G+ F  W+ LNV FNIYNKK+LN FPYP+  + +SLA GSL  L+SW++ + +  K 
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 206 DLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMP 265
                K L PVA+ HTIGHV + VS+SKVAVSFTH IK+ EP FSV++S F  G+  P  
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 266 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYA 325
           +++SLLPI+GG ALA+ TEL+FN  GF+ AMISN+ FV RNIFSKK M  KS+   N YA
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYA 180

Query: 326 CLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVW--WVAAQSIFYHLYNQVSYM 383
            +S+MSL +L+P A   EGP     G+ +AI+ +    ++   + A   F+H Y QV++M
Sbjct: 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240

Query: 384 SLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436
            L ++SPLT S+GN MKR+ VIV SI+ F T + P    G  IAI G F+YS+
Sbjct: 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|219846 pfam08449, UAA, UAA transporter family Back     alignment and domain information
>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family Back     alignment and domain information
>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 454
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PLN00411358 nodulin MtN21 family protein; Provisional 99.96
PRK11272292 putative DMT superfamily transporter inner membran 99.94
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.94
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.94
KOG1443349 consensus Predicted integral membrane protein [Fun 99.94
PRK11689295 aromatic amino acid exporter; Provisional 99.94
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.93
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.93
PRK15430296 putative chloramphenical resistance permease RarD; 99.91
PRK10532293 threonine and homoserine efflux system; Provisiona 99.91
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.9
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.87
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.84
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.82
KOG1581327 consensus UDP-galactose transporter related protei 99.81
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.8
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.78
KOG1580337 consensus UDP-galactose transporter related protei 99.77
KOG3912372 consensus Predicted integral membrane protein [Gen 99.72
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.72
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.71
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.71
KOG2765416 consensus Predicted membrane protein [Function unk 99.64
KOG1582367 consensus UDP-galactose transporter related protei 99.64
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.6
COG2962293 RarD Predicted permeases [General function predict 99.54
KOG4510346 consensus Permease of the drug/metabolite transpor 99.52
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.5
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.47
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.16
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.11
KOG2766336 consensus Predicted membrane protein [Function unk 99.04
COG2510140 Predicted membrane protein [Function unknown] 98.85
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 98.85
PF06800269 Sugar_transport: Sugar transport protein; InterPro 98.85
PF13536113 EmrE: Multidrug resistance efflux transporter 98.83
COG2510140 Predicted membrane protein [Function unknown] 98.8
KOG4314290 consensus Predicted carbohydrate/phosphate translo 98.79
PRK15430 296 putative chloramphenical resistance permease RarD; 98.63
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.56
TIGR00688256 rarD rarD protein. This uncharacterized protein is 98.52
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.5
PLN00411 358 nodulin MtN21 family protein; Provisional 98.32
PRK10532293 threonine and homoserine efflux system; Provisiona 98.32
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.23
PRK11689295 aromatic amino acid exporter; Provisional 98.2
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.19
PRK11272292 putative DMT superfamily transporter inner membran 98.15
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.01
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 97.96
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 97.88
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 97.81
PF13536113 EmrE: Multidrug resistance efflux transporter 97.67
PRK13499345 rhamnose-proton symporter; Provisional 97.65
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 97.63
COG0697292 RhaT Permeases of the drug/metabolite transporter 97.61
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 97.56
COG2962 293 RarD Predicted permeases [General function predict 97.54
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.46
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.34
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 97.26
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.24
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.01
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 96.96
KOG2922335 consensus Uncharacterized conserved protein [Funct 96.86
PRK09541110 emrE multidrug efflux protein; Reviewed 96.76
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 96.76
PRK11431105 multidrug efflux system protein; Provisional 96.71
PRK10650109 multidrug efflux system protein MdtI; Provisional 96.68
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 96.59
PRK10452120 multidrug efflux system protein MdtJ; Provisional 96.51
COG2076106 EmrE Membrane transporters of cations and cationic 96.41
PRK09541110 emrE multidrug efflux protein; Reviewed 96.36
PRK13499 345 rhamnose-proton symporter; Provisional 96.33
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 96.25
COG2076106 EmrE Membrane transporters of cations and cationic 96.17
PRK11431105 multidrug efflux system protein; Provisional 95.89
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 95.86
PRK10650109 multidrug efflux system protein MdtI; Provisional 95.8
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 95.74
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 95.49
PF06800269 Sugar_transport: Sugar transport protein; InterPro 95.36
PF07857 254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 94.99
KOG4510 346 consensus Permease of the drug/metabolite transpor 94.97
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 94.7
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 94.57
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 93.67
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 93.24
COG3238150 Uncharacterized protein conserved in bacteria [Fun 92.26
COG3238150 Uncharacterized protein conserved in bacteria [Fun 91.97
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 89.59
KOG2765 416 consensus Predicted membrane protein [Function unk 88.9
KOG1581327 consensus UDP-galactose transporter related protei 87.83
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 84.17
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 83.24
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 81.28
KOG1580337 consensus UDP-galactose transporter related protei 80.2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-40  Score=338.17  Aligned_cols=294  Identities=39%  Similarity=0.683  Sum_probs=253.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHHHH
Q 039814          144 QRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKT--DLEFWKSLFPVAVAHT  221 (454)
Q Consensus       144 ~~~~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~--~~~~~~~ll~~gll~~  221 (454)
                      .++++..+|++||++|+..+++||++++++|+|++++.+|++++.+++.+.|..+.++.|+.  .+.+++.++++|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999887766665544443433  3457899999999998


Q ss_pred             HHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHH
Q 039814          222 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLA  301 (454)
Q Consensus       222 l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~  301 (454)
                      ..+...+.|++++++++++++++++|+|+++++++++|||++++++++++++++|+.+++.+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            77888889999999999999999999999999999999999999999999999999999988889999999999999999


Q ss_pred             HHHHHHHHHhccCCC-----CCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHH---HHHh-hchHHHHHHHHHHH
Q 039814          302 FVFRNIFSKKGMKGK-----SVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQK---AIAQ-IGPNFVWWVAAQSI  372 (454)
Q Consensus       302 ~A~~~Vl~kk~~~~~-----~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~---~~~~-~~~~~l~~ll~~~l  372 (454)
                      |++|+++.||.++++     +.++.+.+.++..++.++++|+....|++.. ...|..   .... ....+++.++.+++
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~s~l  284 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW-VPVWTNYTANMTNYTKGIIIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            999999999987654     3567778888888899999998877776432 112211   0011 11234456778899


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814          373 FYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL  438 (454)
Q Consensus       373 ~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k  438 (454)
                      .++++|...|+++++++|+++++.+++||++++++|++++||++++.+++|+++++.|+++|++.|
T Consensus       285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999999999999999999999999999764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query454
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.8 bits (105), Expect = 5e-05
 Identities = 51/339 (15%), Positives = 94/339 (27%), Gaps = 124/339 (36%)

Query: 16  FSSLRLRVQNLSNSLNYPPTIRILH------KNTMISSVKHTPFSASTDFLPKKRFLTPT 69
           +  LR  +  L  + N      ++       K  +   V          +  + +     
Sbjct: 137 YLKLRQALLELRPAKNV-----LIDGVLGSGKTWVALDV-------CLSYKVQCKM---- 180

Query: 70  LKFSPLPIIQNSIF----NNKFSSEKPLHISSTQNL--TFSPKEQQKELKTQCNAYEADR 123
                       IF     N  S E  L +   Q L     P               +D 
Sbjct: 181 ---------DFKIFWLNLKNCNSPETVLEM--LQKLLYQIDPNWTS----------RSDH 219

Query: 124 SRPLDINIEVL-DEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTL 182
           S  + + I  +  E  R   ++  +          L V+ N+ N K  NAF         
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYEN--------CLLVLLNVQNAKAWNAF--------- 262

Query: 183 SLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII 242
           +L+C    +L++  TR            K +     A T  H    +S+   +++ T   
Sbjct: 263 NLSC---KILLT--TR-------F----KQVTDFLSAATTTH----ISLDHHSMTLTP-- 300

Query: 243 KSGEPAFSVLVSRFLFGETLPMPVYMSLLP--IIGGCALAAVTELNFNMIGFMGAMISNL 300
              E        + L  + L        LP  ++               +  +   I + 
Sbjct: 301 --DE-------VKSLLLKYLDCRP--QDLPREVLTTNPRR---------LSIIAESIRD- 339

Query: 301 AFVFRNIFSKKGMKGKSVGGMNYYACLSMM--SLLILTP 337
             +      K          +N     +++  SL +L P
Sbjct: 340 -GLATWDNWKH---------VNCDKLTTIIESSLNVLEP 368

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query454
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.17
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.11
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 97.99
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 97.89
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
Probab=98.17  E-value=3.3e-06  Score=73.35  Aligned_cols=59  Identities=12%  Similarity=0.025  Sum_probs=41.1

Q ss_pred             HHHHhhhhchHHHHHH-HHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814          381 SYMSLDQISPLTFSIG-NTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV  439 (454)
Q Consensus       381 ~f~~l~~isp~t~sv~-~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~  439 (454)
                      ...+++++++..+... ..+.|++++++|+++|||++++.+++|++++++|+++.+..++
T Consensus        47 ~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             HHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            3456899999977666 8999999999999999999999999999999999999987543
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00