Citrus Sinensis ID: 039930

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKKRAPFP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHcccccEEcccccccEEEEEEEEEEEcccEEEEEEEEcccccccEEEEEEEccHHHHHcccHHHHHccccccEEEEccEEcccccccccccHHHHHHHHHccEEEEEEcccccccccccccEEcccccccccccccHHHHHHHHHHccccHHHHHHHccccccccccccccHHHHHcccEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccEEEEcEEEEEccHHHHEEEEEcccccccEEEEEEEEEcHHHHHcccHHHHcccccccEEEcccEEEcccccHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHcccccccccccccHHHccccEEEEEccccccccccccc
Coil and Loop (DISEMBL)
massdkspeptppyggeqppgkpmtmkqHVLDKGAAMMQSLKPIKQMSQHVCTFAlyshdmprqieTHHYVSRLNQDFLqcavydsddstaRLIGVEYIVSDKIFEALPLEEQKLWHSHAyevksglwvnprvpemigrpeldnMAKTYGKFWCtwqvdrgdrlplgapalmmspqavnlgmvrpdlvqkrddkynistdALKQsrveidepewispqadYWKQHAKGFAVDiqssemkkrapfp
Flexible Loop (DISEMBL)
massdkspeptppyggeqppgkpMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYevksglwvnprvPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNistdalkqsrveidepewISPQADYWKQHAKGFAVDiqssemkkrapfp
Low Complexity Region (SEG)
MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKKRAPFP
Disordered region (IsUnstruct)
**********************************************MSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLV********************IDEPEWISPQADYWKQHAKGFAV**************
Disordered Region (DISOPRED)
**************************************QSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNI***************EWISPQADYWKQHAKGFAVDI************
Disordered Region (DISEMBL)
***********************MTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQ***********
Disordered Region (DISPRO)
************************TMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSS*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKKRAPFP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
255562556	247	conserved hypothetical protein [Ricinus	1.0	0.991	0.785	1e-114
225443672	245	PREDICTED: uncharacterized protein LOC10	0.995	0.995	0.780	1e-110
357446999	246	hypothetical protein MTR_2g017440 [Medic	1.0	0.995	0.747	1e-108
449433718	247	PREDICTED: uncharacterized protein LOC10	1.0	0.991	0.716	1e-101
351724719	245	uncharacterized protein LOC100305847 [Gl	1.0	1.0	0.718	1e-100
326529469	248	predicted protein [Hordeum vulgare subsp	1.0	0.987	0.681	8e-95
115439703	250	Os01g0728700 [Oryza sativa Japonica Grou	1.0	0.98	0.644	6e-93
218188994	250	hypothetical protein OsI_03604 [Oryza sa	1.0	0.98	0.64	2e-92
357136258	256	PREDICTED: uncharacterized protein LOC10	1.0	0.957	0.625	8e-92
242058579	250	hypothetical protein SORBIDRAFT_03g03349	1.0	0.98	0.636	1e-91

>gi|255562556|ref|XP_002522284.1| conserved hypothetical protein [Ricinus communis] gi|223538537|gb|EEF40142.1| conserved hypothetical protein [Ricinus communis]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/247 (78%), Positives = 223/247 (90%), Gaps = 2/247 (0%)

Query: 1   MASSDKSPEPTPPYGGEQP--PGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYS 58
           MASSD+SP+PTP  GGE+P  PGKPM+ +QH+LDKGA M+QSLKP+KQ+SQHVCTFA+YS
Sbjct: 1   MASSDRSPDPTPVRGGEEPIPPGKPMSTEQHMLDKGAQMLQSLKPVKQISQHVCTFAIYS 60

Query: 59  HDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHS 118
           HDM RQIETHH+VSR+NQDFLQCAVYD DDS  RLIGVEYIVSDKIFE LP EEQKLWHS
Sbjct: 61  HDMSRQIETHHFVSRINQDFLQCAVYDIDDSNGRLIGVEYIVSDKIFETLPPEEQKLWHS 120

Query: 119 HAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAV 178
           HAYEVKSGL V+PRVPEM+ +PEL+N+AKTYGKFWCTWQVDRGD+LPLG PALMMSPQAV
Sbjct: 121 HAYEVKSGLLVHPRVPEMVVKPELENLAKTYGKFWCTWQVDRGDKLPLGVPALMMSPQAV 180

Query: 179 NLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEM 238
           NLGMV+P+LV++RD KYNI TDA+KQSR+EI EPEWI+PQADYWKQH K FA+D + ++M
Sbjct: 181 NLGMVKPELVERRDYKYNILTDAIKQSRLEIAEPEWINPQADYWKQHGKCFAIDAEITDM 240

Query: 239 KKRAPFP 245
           K  APFP
Sbjct: 241 KLTAPFP 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443672|ref|XP_002263413.1| PREDICTED: uncharacterized protein LOC100246418 [Vitis vinifera] gi|297740574|emb|CBI30756.3| unnamed protein product [Vitis vinifera]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/246 (78%), Positives = 215/246 (87%), Gaps = 2/246 (0%)

Query: 1   MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHD 60
           MASSDK+P+  P       PG PM   Q+VLDKGA M+QSLKP+KQM QHVCTFALYSHD
Sbjct: 1   MASSDKTPQGVP-TSESHTPGTPMKAGQYVLDKGAQMLQSLKPVKQMKQHVCTFALYSHD 59

Query: 61  MPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHA 120
           M RQIETHHY++RLNQDFLQCAVYDSD+S A LIG+EYIVSD+IFEALP EEQKLWHSHA
Sbjct: 60  MTRQIETHHYITRLNQDFLQCAVYDSDNSDAHLIGIEYIVSDRIFEALPPEEQKLWHSHA 119

Query: 121 YEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNL 180
           YE+KSG+WVNP VPEMI +PEL+N+AK+YGKFWCTWQVDRGDRLPLGAPALMMSPQAVNL
Sbjct: 120 YEIKSGMWVNPGVPEMIQKPELENIAKSYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNL 179

Query: 181 GMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQ-HAKGFAVDIQSSEMK 239
           G+VRPDLVQKRDDKY ISTD+LK  R+EI EPEWI+P ADYWKQ   KGFA+DI+ +EMK
Sbjct: 180 GIVRPDLVQKRDDKYKISTDSLKPLRLEIPEPEWINPNADYWKQSFGKGFALDIEPTEMK 239

Query: 240 KRAPFP 245
            RAPFP
Sbjct: 240 LRAPFP 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446999|ref|XP_003593775.1| hypothetical protein MTR_2g017440 [Medicago truncatula] gi|355482823|gb|AES64026.1| hypothetical protein MTR_2g017440 [Medicago truncatula]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/246 (74%), Positives = 211/246 (85%), Gaps = 1/246 (0%)

Query: 1   MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHD 60
           MAS+DKSP PTP  G +  PG+ MTM+QHV+DK A M+QS KPI QMSQHVCTFA+YSHD
Sbjct: 1   MASTDKSPNPTPAKGSDPTPGEAMTMEQHVVDKSAMMVQSFKPINQMSQHVCTFAMYSHD 60

Query: 61  MPRQIETHHYVSRLNQDFLQCAVYDSDD-STARLIGVEYIVSDKIFEALPLEEQKLWHSH 119
           M RQI+THHY SRL + FLQCAVYDSDD +  RLIGVEYI+SD IFE LP EEQKLWHSH
Sbjct: 61  MSRQIQTHHYCSRLTEQFLQCAVYDSDDPNKGRLIGVEYIISDDIFETLPPEEQKLWHSH 120

Query: 120 AYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVN 179
           AYE+KSGLWVNPRVPEMIG PEL+++AKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAV+
Sbjct: 121 AYEIKSGLWVNPRVPEMIGMPELESLAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVS 180

Query: 180 LGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMK 239
            G+VRPD++ +RD KY IS+++LK SR+EI EPE I P ADYWKQH KGF +D + +EMK
Sbjct: 181 PGLVRPDILHERDTKYKISSESLKSSRIEIPEPEMIHPMADYWKQHGKGFVIDFEETEMK 240

Query: 240 KRAPFP 245
           KRAPFP
Sbjct: 241 KRAPFP 246

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433718|ref|XP_004134644.1| PREDICTED: uncharacterized protein LOC101210573 [Cucumis sativus] gi|449508551|ref|XP_004163344.1| PREDICTED: uncharacterized protein LOC101230140 [Cucumis sativus]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/247 (71%), Positives = 209/247 (84%), Gaps = 2/247 (0%)

Query: 1   MASSDKSPEPTPPYGGE-QPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSH 59
           MASSDK   P    G E QPPG  +++ Q +L KGA+++QS  P+KQ+S H C+FALY+H
Sbjct: 1   MASSDKPAGPLKQGGLESQPPGGRVSVAQEMLGKGASILQSHNPLKQISHHACSFALYAH 60

Query: 60  DMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSH 119
           D+ RQIETHHYVSRLNQDFLQCAVYDSD S A LIG+EYIVSD+IFE L  +EQKLWHSH
Sbjct: 61  DLSRQIETHHYVSRLNQDFLQCAVYDSDTSHAHLIGIEYIVSDRIFETLSPDEQKLWHSH 120

Query: 120 AYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVN 179
           AYEVKSGL V+PRVPEM+ +PEL+N+AKTYGKFWCTWQVDRGD+LP+GAPALMMSPQA  
Sbjct: 121 AYEVKSGLMVHPRVPEMVVKPELENLAKTYGKFWCTWQVDRGDKLPMGAPALMMSPQATG 180

Query: 180 LGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQH-AKGFAVDIQSSEM 238
           +GMVR +L+QKRD+ YNIST A+K SRVEI+EPEWI+PQADYWKQH  KGFA+DI  ++M
Sbjct: 181 VGMVREELLQKRDEYYNISTHAIKGSRVEIEEPEWINPQADYWKQHDGKGFAIDIVPTDM 240

Query: 239 KKRAPFP 245
           K RAPFP
Sbjct: 241 KLRAPFP 247

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724719|ref|NP_001237579.1| uncharacterized protein LOC100305847 [Glycine max] gi|255626763|gb|ACU13726.1| unknown [Glycine max]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/245 (71%), Positives = 209/245 (85%)

Query: 1   MASSDKSPEPTPPYGGEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHD 60
           MAS+DKSP+PTP  G +  PGKPM++ QHV+DK A M+QSL PIKQMSQHVC+FA+YSHD
Sbjct: 1   MASTDKSPDPTPAKGPDPTPGKPMSVGQHVIDKSAMMVQSLDPIKQMSQHVCSFAIYSHD 60

Query: 61  MPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHA 120
           M RQIETHHY SRL+Q+F+QCAVYDSD+S ARL+GVEYIV   +FEA P EEQKLWHSHA
Sbjct: 61  MSRQIETHHYCSRLHQNFIQCAVYDSDESKARLLGVEYIVPADVFEAFPPEEQKLWHSHA 120

Query: 121 YEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNL 180
           YE+KSGL VNPRVPE++  PEL+N+A+TYGKFWCTWQVDRGDRLP+GAPALMMSPQA + 
Sbjct: 121 YEIKSGLLVNPRVPEVVAMPELENLAQTYGKFWCTWQVDRGDRLPMGAPALMMSPQAASP 180

Query: 181 GMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKK 240
           G+VR +LV +RD KYN S+ +LK SR+EI EPE I+P ADYWKQH KGF +DI+ +EMK 
Sbjct: 181 GLVRAELVLERDAKYNFSSKSLKSSRLEIPEPEMINPLADYWKQHGKGFVIDIEETEMKL 240

Query: 241 RAPFP 245
           R PFP
Sbjct: 241 RPPFP 245

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326529469|dbj|BAK04681.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  352 bits (903), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 169/248 (68%), Positives = 198/248 (79%), Gaps = 3/248 (1%)

Query: 1   MASSDKSPEPTPPYGGEQ--PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYS 58
           MASSD+ P PTP   G    P GKP T    +LDKGAA +QSL+P+KQ+ QHVCTFALY+
Sbjct: 1   MASSDEKPVPTPASTGGDGGPAGKPTTTSTMLLDKGAAALQSLRPVKQIKQHVCTFALYA 60

Query: 59  HDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHS 118
           HD  RQ+ETHH+VSRLNQD LQC VYDSDD  ARLIGVEYIVS KIFE+LP EEQKLWHS
Sbjct: 61  HDPHRQVETHHFVSRLNQDVLQCPVYDSDDKHARLIGVEYIVSRKIFESLPAEEQKLWHS 120

Query: 119 HAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAV 178
           HA+E+K+GLW NP VP M+G+ ELD+MA T+GKFWCTWQVDRGDRLPLGAPALM+SPQA 
Sbjct: 121 HAHEIKTGLWANPWVPSMLGKAELDHMAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQAE 180

Query: 179 NLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISP-QADYWKQHAKGFAVDIQSSE 237
            +G VRPDLV+KRD KY+ ST+ LK +R +++ P    P QADYW +H KGFAVD+   E
Sbjct: 181 RVGAVRPDLVRKRDQKYSFSTEELKAARADVEVPAEPRPGQADYWVRHHKGFAVDVVPHE 240

Query: 238 MKKRAPFP 245
           MK+ APFP
Sbjct: 241 MKRHAPFP 248

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115439703|ref|NP_001044131.1| Os01g0728700 [Oryza sativa Japonica Group] gi|12328500|dbj|BAB21159.1| unknown protein [Oryza sativa Japonica Group] gi|15289812|dbj|BAB63510.1| unknown protein [Oryza sativa Japonica Group] gi|113533662|dbj|BAF06045.1| Os01g0728700 [Oryza sativa Japonica Group] gi|215766014|dbj|BAG98242.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 161/250 (64%), Positives = 196/250 (78%), Gaps = 5/250 (2%)

Query: 1   MASSDKSPEPTPPYGGEQ---PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALY 57
           M+SSD++P PTP  G      PPG+  T+   +LD GA  +Q+LKP++QM QH C+FALY
Sbjct: 1   MSSSDQNPSPTPASGTGTSVPPPGRATTVSSQLLDMGAQAVQALKPVRQMKQHACSFALY 60

Query: 58  SHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWH 117
           +HD+ RQ+E HH+VSRLNQD LQCAVYDSD  +ARLIGVEYIVSD IFE+LP EEQKLWH
Sbjct: 61  AHDLSRQVEVHHFVSRLNQDVLQCAVYDSDKPSARLIGVEYIVSDAIFESLPPEEQKLWH 120

Query: 118 SHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQA 177
           SHAYEVK+GLW +  VPE +   E+  MAKTYGK WCTWQVDRGD LPLGAPALM+SPQA
Sbjct: 121 SHAYEVKAGLWTDVGVPEPLQSSEMARMAKTYGKLWCTWQVDRGDALPLGAPALMVSPQA 180

Query: 178 VNLGMVRPDLVQKRDDKYNISTDA--LKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQS 235
           V  G VR +LV  RD++Y I + A  LK +RVE+DEPEWI+P ADYW+ H KGFA+D+ +
Sbjct: 181 VEPGRVRAELVHGRDERYKIDSSAQGLKGARVEMDEPEWINPNADYWRLHGKGFAIDVTA 240

Query: 236 SEMKKRAPFP 245
           +EMK+ APFP
Sbjct: 241 TEMKRHAPFP 250

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218188994|gb|EEC71421.1| hypothetical protein OsI_03604 [Oryza sativa Indica Group]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/250 (64%), Positives = 196/250 (78%), Gaps = 5/250 (2%)

Query: 1   MASSDKSPEPTPPYGGEQ---PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALY 57
           M+SSD++P PTP  G      PPG+  T+   +LD GA  +Q+LKP++QM QH C+FALY
Sbjct: 1   MSSSDQNPSPTPASGTGTSVPPPGRATTVSSQLLDMGAQAVQALKPVRQMKQHACSFALY 60

Query: 58  SHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWH 117
           +HD+ RQ+E HH+VSRLNQD LQCAVYDSD  +ARLIG+EYIVSD IFE+LP EEQKLWH
Sbjct: 61  AHDLSRQVEVHHFVSRLNQDVLQCAVYDSDKPSARLIGMEYIVSDAIFESLPPEEQKLWH 120

Query: 118 SHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQA 177
           SHAYEVK+GLW +  VPE +   E+  MAKTYGK WCTWQVDRGD LPLGAPALM+SPQA
Sbjct: 121 SHAYEVKAGLWTDVGVPEPLQSSEMARMAKTYGKLWCTWQVDRGDALPLGAPALMVSPQA 180

Query: 178 VNLGMVRPDLVQKRDDKYNISTDA--LKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQS 235
           V  G VR +LV  RD++Y I + A  LK +RVE+DEPEWI+P ADYW+ H KGFA+D+ +
Sbjct: 181 VEPGRVRAELVHGRDERYKIDSSAQGLKGARVEMDEPEWINPNADYWRLHGKGFAIDVTA 240

Query: 236 SEMKKRAPFP 245
           +EMK+ APFP
Sbjct: 241 TEMKRHAPFP 250

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136258|ref|XP_003569722.1| PREDICTED: uncharacterized protein LOC100835719 [Brachypodium distachyon]

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 160/256 (62%), Positives = 196/256 (76%), Gaps = 11/256 (4%)

Query: 1   MASSDKSPEPTPPYGGEQ---------PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHV 51
           M+SSD++P PTP  G            P G+P T+    +D GA ++Q LKP++QM QH 
Sbjct: 1   MSSSDQNPAPTPASGSGTTGGTSAAPGPLGRPTTVSSQAMDMGAQVLQPLKPVRQMKQHA 60

Query: 52  CTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLE 111
           C+FALY+HDM RQ+E HH+VSRLNQD LQCAVYDSD  +ARLIGVEYIVSD IFE LP E
Sbjct: 61  CSFALYAHDMRRQLEAHHFVSRLNQDVLQCAVYDSDKPSARLIGVEYIVSDGIFETLPAE 120

Query: 112 EQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPAL 171
           EQ+LWHSHAYEVK+GLW +  VPEM+   E+  MAKTYGKFWC WQ DRGDRLPLGAPAL
Sbjct: 121 EQRLWHSHAYEVKAGLWTDVGVPEMLQTSEMGRMAKTYGKFWCAWQADRGDRLPLGAPAL 180

Query: 172 MMSPQAVNLGMVRPDLVQKRDDKYNISTDA--LKQSRVEIDEPEWISPQADYWKQHAKGF 229
           M+SPQAV  G VR +LV+ RD+++ + + A  LK +RVE++EPEWI+P ADYW+ H KGF
Sbjct: 181 MVSPQAVEPGRVRAELVRSRDERFKVDSSARGLKGARVEMEEPEWINPNADYWRMHGKGF 240

Query: 230 AVDIQSSEMKKRAPFP 245
           AVD+ +SEMK+ APFP
Sbjct: 241 AVDVTASEMKRNAPFP 256

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242058579|ref|XP_002458435.1| hypothetical protein SORBIDRAFT_03g033490 [Sorghum bicolor] gi|241930410|gb|EES03555.1| hypothetical protein SORBIDRAFT_03g033490 [Sorghum bicolor]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/250 (63%), Positives = 196/250 (78%), Gaps = 5/250 (2%)

Query: 1   MASSDKSPEPTPPYGGE---QPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALY 57
           M+SSD++P  TP  GG     PPG+P  +   VLD GA ++QSLKP++QM QH C+FALY
Sbjct: 1   MSSSDQNPAATPASGGPAEPSPPGRPTAVSSQVLDAGARLVQSLKPVRQMKQHACSFALY 60

Query: 58  SHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWH 117
           +HD+ RQ+E HH+VSRLNQD LQCAVYDSD  +ARLIGVEYIVSD IFE LP +EQ+LWH
Sbjct: 61  AHDLHRQMEVHHFVSRLNQDVLQCAVYDSDKPSARLIGVEYIVSDSIFEGLPPDEQRLWH 120

Query: 118 SHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQA 177
           SHAYEVK+GLW +  VPE +   E+ ++AKTYGK WCTWQVDRGD LPLGAPALM+SPQA
Sbjct: 121 SHAYEVKAGLWTDVGVPESLQSSEMASLAKTYGKLWCTWQVDRGDALPLGAPALMVSPQA 180

Query: 178 VNLGMVRPDLVQKRDDKYNISTDA--LKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQS 235
           V  G  R +LV+ RD++Y + + A  LK +RVE+DEPEWI+P ADYW+ H KGFAVD+  
Sbjct: 181 VEPGRARGELVRGRDERYRVDSSAGGLKAARVEMDEPEWINPNADYWRLHRKGFAVDVVP 240

Query: 236 SEMKKRAPFP 245
           +EMK+ APFP
Sbjct: 241 AEMKRHAPFP 250

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2171968	247	AT5G45690 "AT5G45690" [Arabido	1.0	0.991	0.651	3.3e-86
TAIR|locus:2013668	237	AT1G29680 [Arabidopsis thalian	0.942	0.974	0.629	8.2e-83
TAIR|locus:2117089	247	AT4G18920 "AT4G18920" [Arabido	1.0	0.991	0.607	1.4e-80
TAIR|locus:2201041	241	AT1G05510 "AT1G05510" [Arabido	0.893	0.908	0.4	3.8e-46
TAIR|locus:504956051	241	AT2G31985 [Arabidopsis thalian	0.893	0.908	0.404	1.2e-44
UNIPROTKB|Q87WC8	125	PSPTO_4623 "Conserved domain p	0.408	0.8	0.346	6.6e-11

TAIR|locus:2171968 AT5G45690 "AT5G45690" [Arabidopsis thaliana (taxid:3702)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 161/247 (65%), Positives = 193/247 (78%)

Query:     1 MASSDKSPEPTPPYGGEQ--PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYS 58
             MASSD+ P   P   G +  PPG P TMK  V+DKGAAMMQSLKPIKQMS H+C+FA Y 
Sbjct:     1 MASSDERPGAYPARDGSENLPPGDPKTMKTVVMDKGAAMMQSLKPIKQMSLHLCSFACYG 60

Query:    59 HDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHS 118
             HD  RQIE + YV RLNQDFLQCAVYD D S   LIG+EYIVS+++FE+L  EEQKLWHS
Sbjct:    61 HDPSRQIEVNFYVHRLNQDFLQCAVYDCDSSKPHLIGIEYIVSERLFESLDPEEQKLWHS 120

Query:   119 HAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAV 178
             H YE+++GL V PRVPE++ + EL+N+AKTYGKFWCTWQ DRGD+LPLGAP+LMMSPQ V
Sbjct:   121 HDYEIQTGLLVTPRVPELVAKTELENIAKTYGKFWCTWQTDRGDKLPLGAPSLMMSPQDV 180

Query:   179 NLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEM 238
             N+G ++P L++KRDD+Y IST++LK SRV I  PE  +  ADYW  H KG AVDI  +EM
Sbjct:   181 NMGKIKPGLLKKRDDEYGISTESLKTSRVGIMGPEKKNSMADYWVHHGKGLAVDIIETEM 240

Query:   239 KKRAPFP 245
             +K APFP
Sbjct:   241 QKLAPFP 247

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2013668 AT1G29680 [Arabidopsis thaliana (taxid:3702)]

 Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
 Identities = 146/232 (62%), Positives = 182/232 (78%)

Query:    15 GGEQ-PPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSR 73
             G +Q PPG PMT+   ++D G+ +MQ   P+KQM+ HV TFA+Y  DM R I THHYV R
Sbjct:     6 GDDQVPPGGPMTVSTRLIDAGSTIMQRRLPVKQMNTHVSTFAIYGGDMSRLIGTHHYVHR 65

Query:    74 LNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRV 133
             +N +FLQCAVY SD S A LIG+EY++SD+++E L  +EQKLWHSHAYEVKSG W  PR+
Sbjct:    66 VNDEFLQCAVYASDRSDAPLIGIEYVISDRLYETLSEDEQKLWHSHAYEVKSGSWAYPRL 125

Query:   134 PEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDD 193
             PE++  PEL N+AKTYGKFWCTWQ+DRGD+LP+GAP LMMSPQ V  G++RP+LV++RD+
Sbjct:   126 PEVVAAPELKNIAKTYGKFWCTWQIDRGDKLPMGAPELMMSPQGVGQGVLRPELVKRRDE 185

Query:   194 KYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKKRAPFP 245
             KYNISTD LK +R EI EPEWI+P ADYWKQH K F +DI + EM + A FP
Sbjct:   186 KYNISTDDLKHTRAEIAEPEWINPMADYWKQHGKCFVLDIATVEMNRHAQFP 237

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2117089 AT4G18920 "AT4G18920" [Arabidopsis thaliana (taxid:3702)]

 Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
 Identities = 150/247 (60%), Positives = 190/247 (76%)

Query:     1 MASSDKSPEPTPPYGGE--QPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYS 58
             MASSDK P   P   G+  +P G P      +L+KG AMMQS+KPI+QMS HVC+FA YS
Sbjct:     1 MASSDKVPVACPASSGDGKEPMGNPTKTTTAMLEKGTAMMQSMKPIRQMSLHVCSFACYS 60

Query:    59 HDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHS 118
             HD  RQIE H Y  R+NQDFLQCAVYDS+ S A LIG+EYIVS+K+FE+L  EEQKLWHS
Sbjct:    61 HDPGRQIEVHIYGHRVNQDFLQCAVYDSNSSKAHLIGIEYIVSEKLFESLSPEEQKLWHS 120

Query:   119 HAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAV 178
             H YE++  L V PRVPE++ +PEL N+AK+YGKFWCTWQ+DRGD+LPLG P+LM+SPQ V
Sbjct:   121 HDYEIQMALLVTPRVPELVAKPELKNLAKSYGKFWCTWQIDRGDKLPLGVPSLMVSPQDV 180

Query:   179 NLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEM 238
             NLG ++P+LV+KRD+++ IST++LK SR  I  PE  +  ADYW +  KGFA+D+  ++M
Sbjct:   181 NLGRIKPELVKKRDEEHGISTESLKPSRDGICGPEKKNLVADYWVRFRKGFALDVVETDM 240

Query:   239 KKRAPFP 245
             K+ APFP
Sbjct:   241 KRTAPFP 247

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2201041 AT1G05510 "AT1G05510" [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 90/225 (40%), Positives = 143/225 (63%)

Query:    16 GEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLN 75
             G + PG+P      ++D  A+ +QS  PI Q+ QH+C F  Y++DM RQ+E HH+   +N
Sbjct:    12 GPKVPGEPTKTGTSMVDTAASAVQSFAPINQIHQHLCAFHFYAYDMTRQVEAHHFCGHIN 71

Query:    76 QDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPE 135
             +D  QC +YD  D+ ARLIG+EYIV++K+F  LP +E+KLWH+H +EVK G    P VPE
Sbjct:    72 EDMRQCLIYDGPDANARLIGLEYIVTEKLFMTLPDDEKKLWHTHEWEVKGGFLFMPGVPE 131

Query:   136 MIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKY 195
              I R +L+ +AKTYGK +  WQVD G +LP+G P +MM+      G + P+++++ + ++
Sbjct:   132 AIQRQDLEKVAKTYGKVYHFWQVDLGHQLPIGLPNIMMA--VTRDGQLYPEMIKETEKQF 189

Query:   196 NISTDALKQSRVEIDEPEW-ISPQADYWKQHAKGFAVDIQSSEMK 239
              +S D  ++SR  +  P+  I P A+      KG  ++++  ++K
Sbjct:   190 GVSIDKERESRAYMKGPDHGIHPLAN---GGGKGLKLELREVDIK 231

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

TAIR|locus:504956051 AT2G31985 [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 91/225 (40%), Positives = 137/225 (60%)

Query:    16 GEQPPGKPMTMKQHVLDKGAAMMQSLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLN 75
             G   PG+       ++D  A+ +QS  P+ Q+ QH+C F  Y+ DM RQ+E HH+ S +N
Sbjct:    12 GPAVPGETTKTGTSIIDTAASAVQSFAPVNQIHQHLCAFHFYADDMARQVEAHHFCSHVN 71

Query:    76 QDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPE 135
             ++  QC +YD  D+ ARLIG+EYIVS+K+F  LP EE+KLWHSH +EVK G    P VP 
Sbjct:    72 EEMRQCLIYDGPDANARLIGLEYIVSEKLFMTLPDEEKKLWHSHEWEVKGGFLFMPGVPG 131

Query:   136 MIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKY 195
              I R +LD +AKTYGK +  WQVD G  LP+G P +MM+      G +  +++Q+ + ++
Sbjct:   132 AIQRKDLDKVAKTYGKVFHFWQVDLGHELPIGLPNVMMA--VTRDGQLFHEMIQEAEKRF 189

Query:   196 NISTDALKQSRVEIDEPEW-ISPQADYWKQHAKGFAVDIQSSEMK 239
              +S +  + SR  +  PE  I P A+      KG  ++++  ++K
Sbjct:   190 GVSVEGERDSRAYMSGPELGIHPLAN---GGGKGMKLELREVDIK 231

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q87WC8 PSPTO_4623 "Conserved domain protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 152 (58.6 bits), Expect = 6.6e-11, P = 6.6e-11
 Identities = 36/104 (34%), Positives = 52/104 (50%)

Query:   142 LDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDA 201
             ++ +A T+GK W TW  D+   LPLG P LMM   A   G   P + Q+R+ +  I   A
Sbjct:    15 VERLAHTHGKTWHTWHTDQDKTLPLGVPQLMMGFTAD--GQADPAMQQQRNQRLGIVKSA 72

Query:   202 LKQSRVEIDEPEWISPQADYWKQHAKGFAVDIQSSEMKKRAPFP 245
             +K  R +I  P+   P AD W QH K   ++  +  +   A  P
Sbjct:    73 IKAQRADIQIPK-ADPGADGW-QHGKTIQINDPTGHLHGPATSP 114


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       245   0.00099  113 3  11 22  0.46    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  216 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.31u 0.10s 23.41t   Elapsed:  00:00:01
  Total cpu time:  23.31u 0.10s 23.41t   Elapsed:  00:00:01
  Start:  Mon May 20 16:29:41 2013   End:  Mon May 20 16:29:42 2013

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035791001 SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (245 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
pfam06884	171	pfam06884, DUF1264, Protein of unknown function (D	1e-92

>gnl|CDD|219217 pfam06884, DUF1264, Protein of unknown function (DUF1264)

 Score =  269 bits (690), Expect = 1e-92
 Identities = 91/173 (52%), Positives = 122/173 (70%), Gaps = 2/173 (1%)

Query: 40  SLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYI 99
           S  P+KQ+  H+  F +Y+ D  RQ+E HHY S +N+DF QC +YDS+   ARLIG+EYI
Sbjct: 1   SFAPVKQICAHLNAFHVYADDPTRQVEAHHYCSHVNEDFRQCLIYDSNTPDARLIGIEYI 60

Query: 100 VSDKIFEALPLEEQKLWHSHAYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVD 159
           +S+K+FE LP EE+KLWHSH YEVKSG+ V P VPE   + E++ +   YGK W TWQVD
Sbjct: 61  ISEKLFETLPAEEKKLWHSHEYEVKSGMLVMPGVPEAAEKAEMEKVVNLYGKTWHTWQVD 120

Query: 160 RGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNISTDALKQSRVEIDEP 212
           RGD LPLGAP LMMS      G V P LV++RD+++ + T+A ++ R +I+ P
Sbjct: 121 RGDPLPLGAPQLMMS--FTRDGQVDPGLVKERDERFGVDTEAKREQRADIEPP 171

This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 200 residues long. Some family members are annotated as putative lipoproteins. Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
PF06884	171	DUF1264: Protein of unknown function (DUF1264); In	100.0

>PF06884 DUF1264: Protein of unknown function (DUF1264); InterPro: IPR010686 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 200 residues long

Probab=100.00  E-value=1.1e-102  Score=667.04  Aligned_cols=171  Identities=56%  Similarity=1.060  Sum_probs=169.7

Q ss_pred             CCchhhhhhhhceeeeeecCCCCCceeeeeeeeeccCceeeeEeeeCCCCCcceeeeeeeecHHHHhhCChhhhhccccc
Q 039930           40 SLKPIKQMSQHVCTFALYSHDMPRQIETHHYVSRLNQDFLQCAVYDSDDSTARLIGVEYIVSDKIFEALPLEEQKLWHSH  119 (245)
Q Consensus        40 ~~~Pi~~i~~hL~aFH~ya~d~~rqvEAhHYC~~lneD~~QCliYDs~~~~ArLIGIEYiISe~lf~tLP~eEkklWHsH  119 (245)
                      +|+||++||+||||||+|++||+|||||||||+|||+||+||+|||||++|||||||||||||+||+|||+|||||||||
T Consensus         1 nf~Pv~~i~~hl~~fH~y~~d~~rqveahHyC~~vned~~QC~iyDs~~~~ArLIGvEYiISe~lf~tLP~eEkklWHsH   80 (171)
T PF06884_consen    1 NFKPVKQICQHLCAFHFYADDPTRQVEAHHYCSHVNEDFRQCLIYDSNEPNARLIGVEYIISEKLFETLPEEEKKLWHSH   80 (171)
T ss_pred             CCCchHHHHhHhhhhhcccCCCCceeeeeeeeeecCCcceEEEEecCCCCCcceeeeeEEEcHHHHhhCCHHHHhccCCc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeccceeecCCCCccccchHHHHHhhccCceEEeeccCCCCCCCCCCCccccccCcCCCCCCChhHHHhhhhhcCCCh
Q 039930          120 AYEVKSGLWVNPRVPEMIGRPELDNMAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVNLGMVRPDLVQKRDDKYNIST  199 (245)
Q Consensus       120 ~yEVkSG~Lv~P~vP~~aE~~~M~~l~~tYGKt~HtWq~Drgd~LPlG~P~LMmsft~d~~gq~~~~lv~~RD~r~gi~t  199 (245)
                      +|||+||+|++|+||+++|+++|++|++|||||||||||||||+||||+||||||||+|  ||++++||++||+||||||
T Consensus        81 ~~EVkSG~L~~p~vP~~ae~~~m~~l~~tYGKt~HtWq~Drgd~LPlG~P~LM~sft~d--gq~~~~lv~~RD~r~gv~t  158 (171)
T PF06884_consen   81 VYEVKSGMLVMPGVPEAAEKAEMEKLVKTYGKTWHTWQVDRGDKLPLGPPQLMMSFTRD--GQVDPELVKERDERFGVDT  158 (171)
T ss_pred             ceeeeeeeEecCCCCHHHHHHHHHHHHhhhCCeEEeccCCCCCCCCCCCCeeccccCCc--ccCCHHHHHHHHHhcCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999  9999999999999999999


Q ss_pred             HHHHhhccCCCCC
Q 039930          200 DALKQSRVEIDEP  212 (245)
Q Consensus       200 ~~kr~~R~~i~~p  212 (245)
                      ++||++|++|++|
T Consensus       159 ~~kr~~R~~i~~~  171 (171)
T PF06884_consen  159 EEKRESRADIPEP  171 (171)
T ss_pred             HHHHHHhcccccC
Confidence            9999999999986

Some family members are annotated as putative lipoproteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00