Citrus Sinensis ID: 039974

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
MEGLGGRDMVYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR
Secondary Structure (PSIPRED)
cccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHccccccccccccEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHcccccccEEEEHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
meglggrdmvYTASNSLRRsasrwrsnspgafsvsssreeddEEALIWAALEKlptynrlrkgilttsrgeaseidvnnlglqERQRLVDKLVKIAEVDNEQFLLKLKNRIDR
Flexible Loop (DISEMBL)
meglggrdmvYTASNSlrrsasrwrsnspgafsvsssreedDEEALIWAAleklptynrlRKGILttsrgeaseidvnnlglqerQRLVDKLVKiaevdneqfllklknridr
Low Complexity Region (SEG)
MEGLGGRDMVYTASNSLRRSASRWRSNSPGAFsvsssreeddeeALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR
Disordered region (IsUnstruct)
********************************************ALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKL******
Disordered Region (DISOPRED)
*********************************************LIWAALEKLPTYNRLRKGI***********DVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRI**
Disordered Region (DISEMBL)
MEGLGGRDMVYTASNS***************************EALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR
Disordered Region (DISPRO)
****************************************DDEEALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRI**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGLGGRDMVYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
Q76CU2	1434	Pleiotropic drug resistan	N/A	no	0.867	0.068	0.65	9e-29
O24367	1441	Pleiotropic drug resistan	N/A	no	0.876	0.068	0.646	1e-28
Q949G3	1436	Pleiotropic drug resistan	N/A	no	0.823	0.064	0.648	3e-27
Q9M9E1	1423	ABC transporter G family	yes	no	0.911	0.072	0.542	4e-27
Q8GU88	1444	Putative pleiotropic drug	yes	no	0.893	0.069	0.575	3e-25
Q8GU89	1450	Pleiotropic drug resistan	no	no	0.858	0.066	0.542	2e-21
Q8GU92	1464	Probable pleiotropic drug	no	no	0.831	0.064	0.528	2e-20
Q7PC86	1442	ABC transporter G family	no	no	0.858	0.067	0.436	5e-17
Q94A18	1416	ABC transporter G family	no	no	0.876	0.069	0.466	5e-17
Q5Z9S8	1500	Pleiotropic drug resistan	no	no	0.654	0.049	0.453	8e-17

>sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1

 Score =  125 bits (314), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 82/100 (82%), Gaps = 2/100 (2%)

Query: 15  NSLR-RSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSRGEAS 73
            SLR  S S WR+N    FS  SSR+EDDEEAL WAALEKLPT++RLRKG+L  S+G A+
Sbjct: 20  GSLRANSNSIWRNNGVEIFS-RSSRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGAAA 78

Query: 74  EIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           E+D+N+LG QER+ L+++LVK+A+ DNE+FLLKLKNRIDR
Sbjct: 79  EVDINDLGFQERKNLLERLVKVADEDNEKFLLKLKNRIDR 118

May be a general defense protein.
Nicotiana tabacum (taxid: 4097)

>sp|O24367|TUR2_SPIPO Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 76/99 (76%)

Query: 15  NSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSRGEASE 74
            SLRRS S WRS S       SSREEDDEEAL WAALEKLPTY+RLRKGI+T   GE  E
Sbjct: 17  GSLRRSVSAWRSPSTSDVFGRSSREEDDEEALKWAALEKLPTYDRLRKGIMTGDGGEIQE 76

Query: 75  IDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           +D+  LG QER+ L++KLV+ AE DNE+FLLKL+NR++R
Sbjct: 77  VDIQGLGFQERKNLLEKLVRNAEEDNERFLLKLRNRMER 115

May be a general defense protein (By similarity). Seems involved in turion (dormant buds) formation. Confers resistance to the diterpenoid antifungal agent sclareol.

Spirodela polyrrhiza (taxid: 29656)

>sp|Q949G3|PDR1_NICPL Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 78/94 (82%), Gaps = 1/94 (1%)

Query: 20  SASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSRGEASEIDVNN 79
           S S WR+N    FS  S+R+EDDEEAL WAALEKLPTY+RLRKGIL  S+G A+E+DV++
Sbjct: 30  SNSIWRNNGAEVFS-RSARDEDDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVDVDD 88

Query: 80  LGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
            G+ ER+ L+++LVK+A+ DNE+FLLKLKNRIDR
Sbjct: 89  SGVLERKNLLERLVKVADEDNEKFLLKLKNRIDR 122

Excretes secondary metabolites such as terpenes. Involved in both constitutive and jasmonic acid-dependent induced defense. Confers some resistance to sclareol and B.cinerea.

Nicotiana plumbaginifolia (taxid: 4092)

>sp|Q9M9E1|AB40G_ARATH ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1

 Score =  119 bits (299), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 2/105 (1%)

Query: 11  YTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR- 69
           + ASNS+RR++S W+ +S       SSREEDDEEAL WAALEKLPT++RLRKGILT S  
Sbjct: 7   HQASNSMRRNSSVWKKDSGREIFSRSSREEDDEEALRWAALEKLPTFDRLRKGILTASHA 66

Query: 70  -GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
            G  +EID+  LG Q+ ++L+++L+K+ + ++E+ L KLK RIDR
Sbjct: 67  GGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDR 111

May be a general defense protein (By similarity). Functions as a pump to exclude Pb(2+) ions and/or Pb(2+)-containing toxic compounds from the cytoplasm. Contributes to Pb(2+) ions resistance. Confers some resistance to the terpene sclareol.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GU88|PDR7_ORYSJ Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 5/106 (4%)

Query: 10  VYTASNSLRRSASRWRSNS--PGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTT 67
           V +   S+RR+AS WR  S    AF   S REEDDEEAL WAA+EKLPTY+R+RKGILT 
Sbjct: 9   VASGGGSVRRTASSWRGTSGRSDAFG-RSVREEDDEEALKWAAIEKLPTYDRMRKGILTA 67

Query: 68  SRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
             G   E+D+  LGLQER+ L+++LV+ AE DNE+FLLKL++R++R
Sbjct: 68  --GGVEEVDIGGLGLQERRNLIERLVRTAEEDNERFLLKLRDRMER 111

May be a general defense protein.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8GU89|PDR4_ORYSJ Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 10/107 (9%)

Query: 16  SLRRSASRWRSNSPGAFSVSSSR---EEDDEEALIWAALEKLPTYNRLRKGILTTSR--- 69
           SLRR  S WRS     FS SSSR   E+DDEEAL WAALE+LPTY+R+R+GIL  S    
Sbjct: 10  SLRREGSMWRSGG-DVFSRSSSRFQDEDDDEEALRWAALERLPTYDRVRRGILAVSSEDG 68

Query: 70  ---GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
              GE  E+DV  LG +E + L+++LV+ A+ D+E+FLLKL+ R+DR
Sbjct: 69  GAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDR 115

May be a general defense protein.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8GU92|PDR2_ORYSJ Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 12/106 (11%)

Query: 20  SASRWRSNSPGAFS---VSSSRE--EDDEEALIWAALEKLPTYNRLRKGILTTSRGEASE 74
           +AS W S   G FS    SSS E  EDDEEAL WAALEKLPTY+R+R+ +L         
Sbjct: 25  AASMWWSADNGVFSRSRASSSGEDGEDDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGG 84

Query: 75  -------IDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                  +DV +LG QER+ L+++LV++AE DNE+FLLKLK RIDR
Sbjct: 85  GEAGKKVVDVLSLGPQERRALLERLVRVAEDDNERFLLKLKERIDR 130

May be a general defense protein.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7PC86|AB35G_ARATH ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 13/110 (11%)

Query: 16  SLRRSASRWRSNSPGAFSVSSSREE---DDEEALIWAALEKLPTYNRLRKGILTTSRGE- 71
           ++ RS S+   N    F+ SS R +   +DEEAL WA++EKLPTYNRLR  ++    GE 
Sbjct: 18  TISRSVSKASRNMEDIFNTSSRRTKSVNEDEEALKWASIEKLPTYNRLRTSLMP-ELGED 76

Query: 72  --------ASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                      +DV  L  +ERQ+ +D + K+AE DNE+ L KL+NRIDR
Sbjct: 77  DVYGNQILNKAVDVTKLDGEERQKFIDMVFKVAEQDNERILTKLRNRIDR 126

May be a general defense protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A18|AB29G_ARATH ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 6/105 (5%)

Query: 12  TASNSLRRSASRW-RSNSPGAFS--VSSSREEDDEEALIWAALEKLPTYNRLRKGILTTS 68
           T S SL +S      SNS   FS    S+ ++ DEEAL WAALEKLPT+ RLR  I+   
Sbjct: 3   TLSRSLSKSLGELLASNSNNHFSRRSGSTIDDHDEEALKWAALEKLPTFARLRTTII--- 59

Query: 69  RGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                 +DV  LG+ +RQ+ +D + K+ E DNE+FL K +NRIDR
Sbjct: 60  HPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKFRNRIDR 104

May be a general defense protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z9S8|PDR12_ORYSJ Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 60/86 (69%), Gaps = 12/86 (13%)

Query: 40  EDDEEALIWAALEKLPTYNRLRKGILTTS------------RGEASEIDVNNLGLQERQR 87
           +DDEEAL WAA+E+LPTY+R+R  IL+++            + +  E+DV  LG+ ERQ 
Sbjct: 54  DDDEEALRWAAIERLPTYSRMRTAILSSAEEEAAAAAAGAGKQQYKEVDVRRLGVGERQE 113

Query: 88  LVDKLVKIAEVDNEQFLLKLKNRIDR 113
            ++++ ++AE DN++FL KL+NRIDR
Sbjct: 114 FIERVFRVAEEDNQRFLQKLRNRIDR 139

May be a general defense protein.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
356555825	1427	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.714	8e-35
147799605	1400	hypothetical protein VITISV_005227 [Viti	0.902	0.072	0.701	7e-34
356555801	1426	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.711	1e-33
356555803	1417	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.711	1e-33
359482642	1429	PREDICTED: pleiotropic drug resistance p	0.902	0.071	0.701	1e-33
297743342	1582	unnamed protein product [Vitis vinifera]	0.911	0.065	0.695	2e-33
359482993	1430	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.673	2e-33
359482989	1426	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.673	2e-33
356550580	1426	PREDICTED: pleiotropic drug resistance p	0.911	0.072	0.701	8e-33
147795710	1477	hypothetical protein VITISV_026320 [Viti	0.911	0.069	0.673	3e-32

>gi|356555825|ref|XP_003546230.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 75/105 (71%), Positives = 91/105 (86%), Gaps = 2/105 (1%)

Query: 10  VYTASNSLR-RSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTS 68
           +Y ASNSLR RS++ WR++   AFS  SSREEDDEEAL WAALEKLPTYNRLRKG+LT S
Sbjct: 6   IYRASNSLRSRSSTVWRNSGVEAFS-RSSREEDDEEALKWAALEKLPTYNRLRKGLLTAS 64

Query: 69  RGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
            G A+EIDV++LG+QERQ+L+++LVK+AE DNE+FLLKLK RIDR
Sbjct: 65  HGVANEIDVSDLGIQERQKLLERLVKVAEEDNERFLLKLKERIDR 109

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799605|emb|CAN61934.1| hypothetical protein VITISV_005227 [Vitis vinifera]

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 73/104 (70%), Positives = 86/104 (82%), Gaps = 2/104 (1%)

Query: 11  YTASNSLRRSASR-WRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           Y AS SLRR+ S  WRS+    FS  SSR+EDDEEAL WAALEKLPTYNRLR+G+L  S 
Sbjct: 7   YRASGSLRRNGSSIWRSSGADVFS-RSSRDEDDEEALKWAALEKLPTYNRLRRGLLMGSE 65

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           GEASEID++NLG QE++ LV++LVK+AE DNE+FLLKLKNRIDR
Sbjct: 66  GEASEIDIHNLGFQEKKNLVERLVKVAEEDNEKFLLKLKNRIDR 109

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555801|ref|XP_003546218.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 1 [Glycine max]

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y ASNSLRRS++ WR++    FS  SSREEDDEEAL WAALEKLPTYNRLRKG+LT S 
Sbjct: 6   IYRASNSLRRSSTVWRNSGVEVFS-RSSREEDDEEALKWAALEKLPTYNRLRKGLLTASH 64

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G A+EIDV++LG+QERQ+L+++LVK+AE DNE+FLLKLK RIDR
Sbjct: 65  GVANEIDVSDLGIQERQKLLERLVKVAEEDNERFLLKLKERIDR 108

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555803|ref|XP_003546219.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 2 [Glycine max]

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y ASNSLRRS++ WR++    FS  SSREEDDEEAL WAALEKLPTYNRLRKG+LT S 
Sbjct: 6   IYRASNSLRRSSTVWRNSGVEVFS-RSSREEDDEEALKWAALEKLPTYNRLRKGLLTASH 64

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G A+EIDV++LG+QERQ+L+++LVK+AE DNE+FLLKLK RIDR
Sbjct: 65  GVANEIDVSDLGIQERQKLLERLVKVAEEDNERFLLKLKERIDR 108

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482642|ref|XP_002285020.2| PREDICTED: pleiotropic drug resistance protein 1-like [Vitis vinifera]

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 73/104 (70%), Positives = 86/104 (82%), Gaps = 2/104 (1%)

Query: 11  YTASNSLRRSASR-WRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           Y AS SLRR+ S  WRS+    FS  SSR+EDDEEAL WAALEKLPTYNRLR+G+L  S 
Sbjct: 7   YRASGSLRRNGSSIWRSSGADVFS-RSSRDEDDEEALKWAALEKLPTYNRLRRGLLMGSE 65

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           GEASEID++NLG QE++ LV++LVK+AE DNE+FLLKLKNRIDR
Sbjct: 66  GEASEIDIHNLGFQEKKNLVERLVKVAEEDNEKFLLKLKNRIDR 109

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743342|emb|CBI36209.3| unnamed protein product [Vitis vinifera]

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/105 (69%), Positives = 86/105 (81%), Gaps = 2/105 (1%)

Query: 10  VYTASNSLRRSASR-WRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTS 68
           +Y AS S RR+ S  WR++    FS  SSR+EDDEEAL WAALEKLPTYNRLRKG+L  S
Sbjct: 175 IYRASGSFRRNGSSIWRNSGADVFS-QSSRDEDDEEALKWAALEKLPTYNRLRKGLLMGS 233

Query: 69  RGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
            GEASEID++NLG QE++ LV++LVKIAE DNE+FLLKLKNRIDR
Sbjct: 234 EGEASEIDIHNLGFQEKKNLVERLVKIAEEDNEKFLLKLKNRIDR 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482993|ref|XP_002285178.2| PREDICTED: pleiotropic drug resistance protein 1 isoform 1 [Vitis vinifera]

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/104 (67%), Positives = 87/104 (83%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y A+ SLRR+ S WRS+    FS  SSR+EDDEEAL WAALEKLPTYNRLRKG+L  S+
Sbjct: 6   IYRAAGSLRRNGSMWRSSGADVFS-RSSRDEDDEEALKWAALEKLPTYNRLRKGLLMGSQ 64

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G ASE+DV+NLG QE+Q L+++LVKIAE DNE+FLL+L+NRI+R
Sbjct: 65  GAASEVDVDNLGYQEKQSLMERLVKIAEEDNEKFLLRLRNRIER 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482989|ref|XP_003632875.1| PREDICTED: pleiotropic drug resistance protein 1 isoform 2 [Vitis vinifera]

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/104 (67%), Positives = 87/104 (83%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y A+ SLRR+ S WRS+    FS  SSR+EDDEEAL WAALEKLPTYNRLRKG+L  S+
Sbjct: 6   IYRAAGSLRRNGSMWRSSGADVFS-RSSRDEDDEEALKWAALEKLPTYNRLRKGLLMGSQ 64

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G ASE+DV+NLG QE+Q L+++LVKIAE DNE+FLL+L+NRI+R
Sbjct: 65  GAASEVDVDNLGYQEKQSLMERLVKIAEEDNEKFLLRLRNRIER 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550580|ref|XP_003543663.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/104 (70%), Positives = 88/104 (84%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y ASNSLRRS++ WR++    FS  SSREEDDEEAL WAALEKLPTYNRLRKG+LT S 
Sbjct: 6   IYRASNSLRRSSTAWRNSGVEVFS-RSSREEDDEEALKWAALEKLPTYNRLRKGLLTASH 64

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G A+EIDV++LG QER +L+++LVK+AE DNE+FLLKLK RIDR
Sbjct: 65  GVANEIDVSDLGTQERHKLLERLVKVAEEDNERFLLKLKERIDR 108

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795710|emb|CAN61052.1| hypothetical protein VITISV_026320 [Vitis vinifera]

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/104 (67%), Positives = 87/104 (83%), Gaps = 1/104 (0%)

Query: 10  VYTASNSLRRSASRWRSNSPGAFSVSSSREEDDEEALIWAALEKLPTYNRLRKGILTTSR 69
           +Y A+ SLRR+ S WRS+    FS  SSR+EDDEEAL WAALEKLPTYNRLRKG+L  S+
Sbjct: 40  IYXAAGSLRRNGSMWRSSGADVFS-RSSRDEDDEEALKWAALEKLPTYNRLRKGLLMGSQ 98

Query: 70  GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
           G ASE+DV+NLG QE+Q L+++LVKIAE DNE+FLL+L+NRI+R
Sbjct: 99  GAASEVDVDNLGFQEKQSLMERLVKIAEEDNEKFLLRLRNRIER 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
TAIR|locus:2196593	1423	ABCG40 "ATP-binding cassette G	0.911	0.072	0.457	1.9e-18
TAIR|locus:2094952	1416	ABCG29 "ATP-binding cassette G	0.876	0.069	0.419	5.8e-12
TAIR|locus:2025931	1469	PEN3 "PENETRATION 3" [Arabidop	0.955	0.073	0.371	2.6e-11
TAIR|locus:2044893	1453	ABCG34 "ATP-binding cassette G	0.601	0.046	0.486	4.3e-11
TAIR|locus:2037703	1442	ABCG35 "ATP-binding cassette G	0.938	0.073	0.384	1.1e-10
TAIR|locus:2039523	1420	ABCG32 "ATP-binding cassette G	0.592	0.047	0.462	3e-10
TAIR|locus:2019693	1454	ABCG39 "ATP-binding cassette G	0.601	0.046	0.430	3.5e-09
TAIR|locus:2049867	1413	ABCG33 "ATP-binding cassette G	0.601	0.048	0.405	1.1e-07
TAIR|locus:2084081	1450	ABCG37 "ATP-binding cassette G	0.876	0.068	0.349	1.1e-07

TAIR|locus:2196593 ABCG40 "ATP-binding cassette G40" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 48/105 (45%), Positives = 70/105 (66%)

Query:    11 YTASNSLRRSASRWRSNSPGAFXXXXXXXXXXXXALIWAALEKLPTYNRLRKGILTTSR- 69
             + ASNS+RR++S W+ +S                AL WAALEKLPT++RLRKGILT S  
Sbjct:     7 HQASNSMRRNSSVWKKDSGREIFSRSSREEDDEEALRWAALEKLPTFDRLRKGILTASHA 66

Query:    70 -GEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
              G  +EID+  LG Q+ ++L+++L+K+ + ++E+ L KLK RIDR
Sbjct:    67 GGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDR 111

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0015692 "lead ion transport" evidence=IMP

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0009723 "response to ethylene stimulus" evidence=RCA;TAS

GO:0009751 "response to salicylic acid stimulus" evidence=TAS

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA;TAS

GO:0010193 "response to ozone" evidence=IEP

GO:0046865 "terpenoid transport" evidence=IDA

GO:0080168 "abscisic acid transport" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2094952 ABCG29 "ATP-binding cassette G29" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 5.8e-12, P = 5.8e-12
 Identities = 44/105 (41%), Positives = 56/105 (53%)

Query:    12 TASNSLRRSASRW-RSNSPGAFXXXXXXXXXXXX--ALIWAALEKLPTYNRLRKGILTTS 68
             T S SL +S      SNS   F              AL WAALEKLPT+ RLR  I+   
Sbjct:     3 TLSRSLSKSLGELLASNSNNHFSRRSGSTIDDHDEEALKWAALEKLPTFARLRTTII--- 59

Query:    69 RGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                   +DV  LG+ +RQ+ +D + K+ E DNE+FL K +NRIDR
Sbjct:    60 HPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKFRNRIDR 104

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015850 "organic hydroxy compound transport" evidence=IDA

GO:1901140 "p-coumaryl alcohol transport" evidence=IDA

GO:1901141 "regulation of lignin biosynthetic process" evidence=IMP

TAIR|locus:2025931 PEN3 "PENETRATION 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 45/121 (37%), Positives = 64/121 (52%)

Query:     4 LGGRDMVYTASNSLRRSASRWRSNSPGAFXXXXXXXXXXXX---ALIWAALEKLPTYNRL 60
             LGG  +  +   S+ RS SR   N    F               AL WAA+EKLPTY+RL
Sbjct:    10 LGGGGV--SMRRSISRSVSRASRNIEDIFSSGSRRTQSVNDDEEALKWAAIEKLPTYSRL 67

Query:    61 RKGILTT--------SRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRID 112
             R  ++          ++  + E+DV  L  ++RQ+ +D + K+AE DNE+ L KL+NRID
Sbjct:    68 RTTLMNAVVEDDVYGNQLMSKEVDVTKLDGEDRQKFIDMVFKVAEQDNERILTKLRNRID 127

Query:   113 R 113
             R
Sbjct:   128 R 128

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA;IMP

GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0031348 "negative regulation of defense response" evidence=RCA;IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0015086 "cadmium ion transmembrane transporter activity" evidence=IDA

GO:0015691 "cadmium ion transport" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0042344 "indole glucosinolate catabolic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP

GO:0071366 "cellular response to indolebutyric acid stimulus" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2044893 ABCG34 "ATP-binding cassette G34" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 35/72 (48%), Positives = 51/72 (70%)

Query:    46 LIWAALEKLPTYNRLRKGIL--TTSRGEAS--EIDVNNLGLQERQRLVDKLVKIAEVDNE 101
             L WAALE+LPTY+RLRKG+L  T   G+    ++DV NL  +E++ L++ ++K  E DNE
Sbjct:    59 LRWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILKFVEEDNE 118

Query:   102 QFLLKLKNRIDR 113
             +FL +L+ R DR
Sbjct:   119 KFLRRLRERTDR 130

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2037703 ABCG35 "ATP-binding cassette G35" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 45/117 (38%), Positives = 60/117 (51%)

Query:     6 GRDMVYTASNSLRRSASRWRSNSPGAFXXXXXXXXXXXXALIWAALEKLPTYNRLRKGIL 65
             G  M  T S S+ + ASR   +                 AL WA++EKLPTYNRLR  ++
Sbjct:    12 GGSMRQTISRSVSK-ASRNMEDIFNTSSRRTKSVNEDEEALKWASIEKLPTYNRLRTSLM 70

Query:    66 TTSRGEAS---------EIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                 GE            +DV  L  +ERQ+ +D + K+AE DNE+ L KL+NRIDR
Sbjct:    71 P-ELGEDDVYGNQILNKAVDVTKLDGEERQKFIDMVFKVAEQDNERILTKLRNRIDR 126

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

TAIR|locus:2039523 ABCG32 "ATP-binding cassette G32" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 31/67 (46%), Positives = 44/67 (65%)

Query:    46 LIWAALEKLPTYNRLRKGILTTSRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLL 105
             L WAAL++LPTY+R+R+GI     GE  EI + NL   E++ L+D+LV   E D EQF  
Sbjct:    25 LRWAALQRLPTYSRIRRGIFRDMVGEPKEIQIGNLEASEQRLLLDRLVNSVENDPEQFFA 84

Query:   106 KLKNRID 112
             +++ R D
Sbjct:    85 RVRKRFD 91

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0042335 "cuticle development" evidence=IMP

TAIR|locus:2019693 ABCG39 "ATP-binding cassette G39" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 31/72 (43%), Positives = 50/72 (69%)

Query:    46 LIWAALEKLPTYNRLRKGIL--TTSRG--EASEIDVNNLGLQERQRLVDKLVKIAEVDNE 101
             L WAA+E+LPT++RLRKG+L  T++ G  E  +ID+  L  ++++ L++ ++   E DNE
Sbjct:    61 LRWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMILSFVEEDNE 120

Query:   102 QFLLKLKNRIDR 113
             +FL  L+ R DR
Sbjct:   121 KFLRDLRERTDR 132

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006855 "drug transmembrane transport" evidence=ISS;IMP

GO:0000302 "response to reactive oxygen species" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2049867 ABCG33 "ATP-binding cassette G33" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 30/74 (40%), Positives = 45/74 (60%)

Query:    45 ALIWAALEKLPTYNRLRKGILTTSRGEASE-----IDVNNLGLQERQRLVDKLVKIAEVD 99
             AL WA +++LPT+ RLR   L    GE +E     +DV  LG  ER  +++KL+K  E D
Sbjct:    24 ALQWAEIQRLPTFKRLRSS-LVDKYGEGTEKGKKVVDVTKLGAMERHLMIEKLIKHIEND 82

Query:   100 NEQFLLKLKNRIDR 113
             N + L K++ R++R
Sbjct:    83 NLKLLKKIRRRMER 96

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2084081 ABCG37 "ATP-binding cassette G37" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/106 (34%), Positives = 53/106 (50%)

Query:    15 NSLRRSASRWRSNSP--GAFXXXXXXXXXXXXALIWAALEKLPTYNRLRKGILTTSRGEA 72
             +S RR  S +RS+S                  AL WA +E+LPT  R+R  +L       
Sbjct:    26 SSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIERLPTVKRMRSTLLDDGDESM 85

Query:    73 SE-----IDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
             +E     +DV  LG  ER  +++KL+K  E DN + L K++ RIDR
Sbjct:    86 TEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKKIRRRIDR 131


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       101   0.00091  102 3  11 22  0.41    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  543 (58 KB)
  Total size of DFA:  103 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.05u 0.10s 10.15t   Elapsed:  00:00:02
  Total cpu time:  10.05u 0.10s 10.15t   Elapsed:  00:00:03
  Start:  Mon May 20 17:03:15 2013   End:  Mon May 20 17:03:18 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005215 "transporter activity" evidence=IDA

GO:0009926 "auxin polar transport" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0071366 "cellular response to indolebutyric acid stimulus" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	113
PLN03140	1470	PLN03140, PLN03140, ABC transporter G family membe	2e-28

>gnl|CDD|215599 PLN03140, PLN03140, ABC transporter G family member; Provisional

 Score =  107 bits (268), Expect = 2e-28
 Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 14/114 (12%)

Query: 14  SNSLRRSASRWRSNSPGAFSV------SSSREEDDEEALIWAALEKLPTYNRLRKGILTT 67
             S+ RS SR   N    FS        +S  ++DEEAL WAA+EKLPTY+RLR  I+ +
Sbjct: 9   RRSISRSVSRSSRNMEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKS 68

Query: 68  --------SRGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR 113
                   ++    E+DV  L   +RQ+ +D + K+AE DNE+FL K +NRIDR
Sbjct: 69  FVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDR 122

Length = 1470

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
PLN03140	1470	ABC transporter G family member; Provisional	99.44
KOG0065	1391	consensus Pleiotropic drug resistance proteins (PD	98.83

>PLN03140 ABC transporter G family member; Provisional

Probab=99.44  E-value=6.6e-14  Score=130.54  Aligned_cols=90  Identities=50%  Similarity=0.768  Sum_probs=73.9

Q ss_pred             cccccCCCCccccCC------CCCcChHHHhHHHHHhhCCchhHhhhcccccC-----CCC---cccccccCCChHHhHH
Q 039974           22 SRWRSNSPGAFSVSS------SREEDDEEALIWAALEKLPTYNRLRKGILTTS-----RGE---ASEIDVNNLGLQERQR   87 (113)
Q Consensus        22 ~~~~~~~~~~f~~~~------~~~~ddEe~L~WaAierLPT~~R~r~~il~~~-----~g~---~~~vDv~kL~~~er~~   87 (113)
                      ++|..  .++|++.+      +..+||||+|+|||+||||||+|+|++++...     .|.   ..++|+.+|+.++++.
T Consensus        19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (1470)
T PLN03140         19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK   96 (1470)
T ss_pred             hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence            55744  57885533      13568999999999999999999999999642     122   2259999999999999


Q ss_pred             HHHHHHHhhhhchHHHHHHHHhhhcC
Q 039974           88 LVDKLVKIAEVDNEQFLLKLKNRIDR  113 (113)
Q Consensus        88 llerl~k~~e~Dne~fL~klreRiDR  113 (113)
                      +++++++++++|+++|++++++|+|+
T Consensus        97 ~~~~~~~~~~~d~~~~~~~~~~~~~~  122 (1470)
T PLN03140         97 FIDMVFKVAEEDNEKFLKKFRNRIDR  122 (1470)
T ss_pred             HHHhhhcccchhHHHHHHHHHhhhcc
Confidence            99999999999999999999998873

>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.83  E-value=4.3e-09  Score=97.72  Aligned_cols=68  Identities=46%  Similarity=0.783  Sum_probs=60.1

Q ss_pred             cChHHHhHHHHHhhCCchhHhhhcccccC-CCCcccccccCCChHHhHHHHHHHHHhhhhchHHHHHHHHhhhcC
Q 039974           40 EDDEEALIWAALEKLPTYNRLRKGILTTS-RGEASEIDVNNLGLQERQRLVDKLVKIAEVDNEQFLLKLKNRIDR  113 (113)
Q Consensus        40 ~ddEe~L~WaAierLPT~~R~r~~il~~~-~g~~~~vDv~kL~~~er~~llerl~k~~e~Dne~fL~klreRiDR  113 (113)
                      ++||++|+|||++||||++|   +++... .+   ++|+.++++.+++.++++.++..++||++++.++++|+++
T Consensus        12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~   80 (1391)
T KOG0065|consen   12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDR   80 (1391)
T ss_pred             chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCc
Confidence            34999999999999999999   555431 22   6999999999999999999999999999999999999985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00