Citrus Sinensis ID: 040032
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 144 | ||||||
| 238769999 | 339 | metal transporter [Nicotiana tabacum] | 0.930 | 0.395 | 0.733 | 8e-53 | |
| 351723099 | 354 | zinc transporter protein ZIP1 precursor | 0.902 | 0.367 | 0.723 | 3e-51 | |
| 255573599 | 355 | zinc/iron transporter, putative [Ricinus | 0.861 | 0.349 | 0.746 | 4e-50 | |
| 356547541 | 347 | PREDICTED: zinc transporter 5-like [Glyc | 0.902 | 0.374 | 0.684 | 3e-49 | |
| 388522705 | 358 | unknown [Medicago truncatula] | 1.0 | 0.402 | 0.625 | 1e-48 | |
| 217072132 | 358 | unknown [Medicago truncatula] | 1.0 | 0.402 | 0.625 | 2e-48 | |
| 38036047 | 359 | metal transport protein [Medicago trunca | 1.0 | 0.401 | 0.625 | 2e-48 | |
| 60592456 | 353 | zinc transporter protein ZIP2 [Fragaria | 0.916 | 0.373 | 0.706 | 9e-48 | |
| 60592454 | 353 | zinc transporter protein ZIP1 [Fragaria | 0.916 | 0.373 | 0.699 | 4e-47 | |
| 224109078 | 342 | ZIP transporter [Populus trichocarpa] gi | 0.902 | 0.380 | 0.684 | 9e-47 |
| >gi|238769999|dbj|BAH66920.1| metal transporter [Nicotiana tabacum] | Back alignment and taxonomy information |
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Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 120/135 (88%), Gaps = 1/135 (0%)
Query: 10 IIFFCILLVLLPNIVRGECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKT 69
+IF+ ILL LLP IV GECTCD ED++R+KT+ALKYK+ AIASIL+A AIGV +PVLGK
Sbjct: 7 VIFWYILL-LLPAIVLGECTCDSEDEERNKTEALKYKMVAIASILIASAIGVCIPVLGKA 65
Query: 70 IPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMV 129
IPALSPE+ FF+IKAFAAGVIL+TGF+HVLPDAFE+LTSPCL E+PW +FPF+GF AMV
Sbjct: 66 IPALSPEKNFFFIIKAFAAGVILATGFIHVLPDAFESLTSPCLKENPWGNFPFSGFIAMV 125
Query: 130 AAIGTLMIDAFATSY 144
+A+GTLM+D +ATSY
Sbjct: 126 SAMGTLMVDTYATSY 140
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Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351723099|ref|NP_001236499.1| zinc transporter protein ZIP1 precursor [Glycine max] gi|15418778|gb|AAK37761.1| zinc transporter protein ZIP1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255573599|ref|XP_002527722.1| zinc/iron transporter, putative [Ricinus communis] gi|223532863|gb|EEF34635.1| zinc/iron transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356547541|ref|XP_003542170.1| PREDICTED: zinc transporter 5-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|388522705|gb|AFK49414.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|217072132|gb|ACJ84426.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|38036047|gb|AAR08413.1| metal transport protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|60592456|gb|AAX28838.1| zinc transporter protein ZIP2 [Fragaria x ananassa] | Back alignment and taxonomy information |
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| >gi|60592454|gb|AAX28837.1| zinc transporter protein ZIP1 [Fragaria x ananassa] | Back alignment and taxonomy information |
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| >gi|224109078|ref|XP_002315075.1| ZIP transporter [Populus trichocarpa] gi|222864115|gb|EEF01246.1| ZIP transporter [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 144 | ||||||
| TAIR|locus:2207140 | 360 | ZIP5 "zinc transporter 5 precu | 0.812 | 0.325 | 0.627 | 1.2e-35 | |
| TAIR|locus:2062576 | 339 | ZIP3 "zinc transporter 3 precu | 0.805 | 0.342 | 0.606 | 3.6e-34 | |
| TAIR|locus:2087705 | 355 | ZIP1 "zinc transporter 1 precu | 0.812 | 0.329 | 0.608 | 3.6e-34 | |
| UNIPROTKB|A3BI11 | 390 | ZIP8 "Zinc transporter 8" [Ory | 0.826 | 0.305 | 0.573 | 1.8e-32 | |
| TAIR|locus:504954991 | 299 | ZIP8 "zinc transporter 8 precu | 0.812 | 0.391 | 0.538 | 3.8e-30 | |
| UNIPROTKB|Q6L8G0 | 353 | ZIP5 "Zinc transporter 5" [Ory | 0.819 | 0.334 | 0.542 | 6.2e-30 | |
| UNIPROTKB|Q75HB1 | 374 | IRT1 "Fe(2+) transport protein | 0.743 | 0.286 | 0.551 | 1.6e-29 | |
| TAIR|locus:2197520 | 364 | ZIP10 "zinc transporter 10 pre | 0.736 | 0.291 | 0.556 | 1.6e-29 | |
| UNIPROTKB|Q7XLD4 | 364 | ZIP3 "Zinc transporter 3" [Ory | 0.791 | 0.313 | 0.524 | 8.2e-28 | |
| UNIPROTKB|Q6L8G1 | 370 | IRT2 "Fe(2+) transport protein | 0.722 | 0.281 | 0.519 | 5.7e-27 |
| TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 74/118 (62%), Positives = 89/118 (75%)
Query: 27 ECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAF 86
+C C EDD+ +K A KYK+AAI S+L AG IGV P+LGK P+L PE FF+ KAF
Sbjct: 30 KCECSHEDDEANKAGAKKYKIAAIPSVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAF 89
Query: 87 AAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATSY 144
AAGVIL+TGF+HVLP+ +E LTSPCL W +FPFTGF AMVAAI TL +D+FATSY
Sbjct: 90 AAGVILATGFMHVLPEGYEKLTSPCLKGEAW-EFPFTGFIAMVAAILTLSVDSFATSY 146
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| TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:504954991 ZIP8 "zinc transporter 8 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2197520 ZIP10 "zinc transporter 10 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 144 | |||
| TIGR00820 | 324 | TIGR00820, zip, ZIP zinc/iron transport family | 5e-52 | |
| PLN02159 | 337 | PLN02159, PLN02159, Fe(2+) transport protein | 1e-33 | |
| pfam02535 | 314 | pfam02535, Zip, ZIP Zinc transporter | 1e-20 |
| >gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family | Back alignment and domain information |
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Score = 167 bits (424), Expect = 5e-52
Identities = 70/117 (59%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Query: 30 CDPEDDD--RDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFA 87
C EDD+ +K ALK K+ AI SIL+A IGV P++GK +P+L PE FF+ KAFA
Sbjct: 1 CSHEDDNSCNNKEGALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFA 60
Query: 88 AGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATSY 144
AGVIL+TGF+HVLP+AFE L+SPCL+ PW FPF GF AM++AI TL++D FATSY
Sbjct: 61 AGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSY 117
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The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324 |
| >gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein | Back alignment and domain information |
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| >gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 144 | |||
| PLN02159 | 337 | Fe(2+) transport protein | 99.95 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 99.95 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 99.94 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 99.74 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 98.8 | |
| KOG2694 | 361 | consensus Putative zinc transporter [Inorganic ion | 97.1 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 96.39 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 94.82 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 93.8 | |
| KOG3907 | 303 | consensus ZIP-like zinc transporter proteins [Intr | 92.26 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 91.12 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 89.01 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 88.47 | |
| PLN02159 | 337 | Fe(2+) transport protein | 86.78 | |
| KOG2693 | 453 | consensus Putative zinc transporter [Inorganic ion | 85.5 |
| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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Probab=99.95 E-value=1.5e-27 Score=202.08 Aligned_cols=116 Identities=46% Similarity=0.873 Sum_probs=107.5
Q ss_pred CCCCCCCCccccccchhHHHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhc
Q 040032 28 CTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENL 107 (144)
Q Consensus 28 ~~~~~~~~~~d~~~~l~lKi~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~ 107 (144)
|.++.+.+|+|+++++++|++++++++++|++|+++|++.++.++.|.+++.+.++|||||||||||+|+|||||+.|++
T Consensus 29 c~~~~~~~c~~~~~~~~lki~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~~~~FagGV~Lat~flHLLp~a~e~l 108 (337)
T PLN02159 29 CDSESANPCINKAKALPLKIIAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTIVKCFASGIILGTGFMHVLPDSFEML 108 (337)
T ss_pred ccCCCCcCccCchhccchHHHHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHHHHHHhhhHhHHHHHHHhhhHHHHhh
Confidence 55544678999999999999999999999999999999998887778888999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhhc
Q 040032 108 TSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATS 143 (144)
Q Consensus 108 ~~~cl~~~~~~~yP~a~li~~~Gf~l~~llE~~~~~ 143 (144)
+++|++.+.|++||++++++++|+++++++|+++++
T Consensus 109 ~~~cl~~~~~~~yP~~~~i~~~g~~l~~liE~~~~~ 144 (337)
T PLN02159 109 SSKCLEDNPWHKFPFAGFVAMLSGLVTLAIDSMATS 144 (337)
T ss_pred hchhhcCCCcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999998763
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00