Citrus Sinensis ID: 040037

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHccccHHHHccccccEEEEEEcccccccccccccEEcccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccEEEEEEEEEcccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccccccEEEccccccccccccHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccHHHHHHcccHHHHcHHccccEEEcEHHccccccccHHHHHcccccccccHHHHHHcccccccccccccHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccHcHEEEEEEEEcccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccHHHcccccccccccccccccccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
aylqrgpcqpkfhnfckSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTknrfsnwkkpKILESMLEVLIELTTCNQGNYLRILRFLANHNkdikkvtlknapryniliapsiqKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKhglsisrlrgqghdrasnmvscksrDIFQEKYLKIMTYQV
Flexible Loop (DISEMBL)
aylqrgpcqpkFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKkvtlknapryniliapsiqkdiVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIErflgskhvtsTITISLKEALDQLFSKHGLSisrlrgqghdrasnmvscksrdifqekylkimtyqv
Low Complexity Region (SEG)
AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Disordered region (IsUnstruct)
***********FHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISR*************SCKSRDIFQEKYLKIMT***
Disordered Region (DISOPRED)
AYLQRGPCQPKFHNF***K******RFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Disordered Region (DISEMBL)
AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Disordered Region (DISPRO)
*YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKIMTYQV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
Q5SVZ6	1142	Zinc finger MYM-type prot	yes	no	0.557	0.123	0.251	3e-08

>sp|Q5SVZ6|ZMYM1_HUMAN Zinc finger MYM-type protein 1 OS=Homo sapiens GN=ZMYM1 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 90  LTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIK 149
           +++ N+GN+L +L   A  +K  +   L N+ + +   +  IQ DI+     E    I+ 
Sbjct: 578 VSSVNKGNFLELLEMRAK-DKGEETFRLMNS-QVDFYNSTQIQSDIIEIIKTEMLQDIVN 635

Query: 150 DISDA-LFAILIDKSCDASMKEQVVVVLQYVDRNRFVI---ERFLGSKHVTSTITISLKE 205
           +I+D+  F+I+ D++ +++MKEQ+ + ++Y  ++   I   ERFLG           L  
Sbjct: 636 EINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHR 695

Query: 206 ALDQLFSKHGLSISRLRGQGHDRASNM 232
            +     + G+ + ++ GQ +D  +N+
Sbjct: 696 TIKTYLQQIGVDMDKIHGQAYDSTTNL 722

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
224126313	788	predicted protein [Populus trichocarpa]	0.913	0.293	0.427	3e-55
15233987	664	uncharacterized protein [Arabidopsis tha	0.913	0.347	0.4	5e-48
357440141	368	Zinc finger MYM-type 1 [Medicago truncat	0.913	0.627	0.398	2e-43
32488762	897	OSJNBb0016D16.6 [Oryza sativa Japonica G	0.913	0.257	0.338	2e-38
18854992	1283	putative transposase [Oryza sativa Japon	0.913	0.180	0.335	5e-38
224042031	897	putative transposase [Oryza sativa Japon	0.913	0.257	0.335	8e-38
116317825	793	OSIGBa0126J24.6 [Oryza sativa Indica Gro	0.913	0.291	0.320	3e-37
242080863	776	hypothetical protein SORBIDRAFT_07g00579	0.905	0.295	0.347	4e-37
19225003	811	putative transposase [Oryza sativa Japon	0.901	0.281	0.331	2e-36
242080751	635	hypothetical protein SORBIDRAFT_07g00480	0.913	0.363	0.327	3e-36

>gi|224126313|ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1| predicted protein [Populus trichocarpa]

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/295 (42%), Positives = 165/295 (55%), Gaps = 64/295 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQ--QQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQT 58
           AYLQ+GPCQP   +F + +F      +RFN AWF  Y   LEYSI K+ A+CL CYLF++
Sbjct: 65  AYLQKGPCQPSHCDFPQKQFGNISTLRRFNPAWFGAYPTWLEYSIAKDAAFCLYCYLFKS 124

Query: 59  IICKCETFTKNRFSNWKKPKILE-------------------------SMLEVLIELTTC 93
                ++F    FSNWKK +  +                         S++ +L E T  
Sbjct: 125 -KGGVDSFVGEGFSNWKKKERFDLHIGKSNSCHNVARIKCENLMNEKQSIMTLLSEQTVK 183

Query: 94  NQGN------------------------------------YLRILRFLANHNKDIKKVTL 117
           +Q +                                    YL +L FL+ +N+ IK+VT 
Sbjct: 184 SQSDYRTRLNASIECARFLLHQGLPFRGHDECECSSNQGNYLELLHFLSRNNEAIKRVTF 243

Query: 118 KNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQ 177
             APR+N L +P IQKDI +A + E TN IIKD+ D+LF+ILID+S D S+KEQ+ VVL+
Sbjct: 244 SEAPRHNKLTSPDIQKDITQAAAEEITNVIIKDLGDSLFSILIDESRDISIKEQMAVVLR 303

Query: 178 YVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           YVD N  +IERFLG +HV  T   SLK A++ LFSKHGLSISRLRGQG+D ASNM
Sbjct: 304 YVDNNGHIIERFLGIQHVRDTTASSLKAAIEALFSKHGLSISRLRGQGYDGASNM 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233987|ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana] gi|4538896|emb|CAB39633.1| putative protein [Arabidopsis thaliana] gi|7267661|emb|CAB78089.1| putative protein [Arabidopsis thaliana] gi|332657378|gb|AEE82778.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/260 (40%), Positives = 152/260 (58%), Gaps = 29/260 (11%)

Query: 2   YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIIC 61
           YL RGPCQP+ H F +    +  +RFN  WF  Y + LEYS+ K  A+CL CYLF+    
Sbjct: 45  YLIRGPCQPRGHKFKQIVIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAG 104

Query: 62  K---CETFTKNRFSNWKKPKILESMLEVLIEL--------------------------TT 92
                ++F    F +W K   L+  + + +                             +
Sbjct: 105 NQGGSDSFLSTGFCSWNKADRLDQHVGLDVNSFHNNAKRKCEDLMRQGLSFRGHDESEES 164

Query: 93  CNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDIS 152
            N+GN+L +L++ A  N+ +KKV LKNAP+ N + +P IQKDIV   S E T +II+++ 
Sbjct: 165 TNKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMD 224

Query: 153 DALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFS 212
           + +F +L+D+S DAS KEQ+ VV ++VD+   V ERF+G  HV  T ++SLK A+D LF+
Sbjct: 225 NDVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHVKETSSLSLKSAIDSLFA 284

Query: 213 KHGLSISRLRGQGHDRASNM 232
           K+GLS+ +LRGQG+D ASNM
Sbjct: 285 KYGLSLKKLRGQGYDGASNM 304

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440141|ref|XP_003590348.1| Zinc finger MYM-type 1 [Medicago truncatula] gi|355479396|gb|AES60599.1| Zinc finger MYM-type 1 [Medicago truncatula]

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 149/256 (58%), Gaps = 25/256 (9%)

Query: 2   YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII- 60
           Y Q+GPCQP+  NF  +KF    ++FNL W+ KY   LEYS  ++ +YCLCCYL ++ + 
Sbjct: 73  YFQKGPCQPREINFPLAKFGDSSRKFNLEWYSKYGGWLEYSQKEDASYCLCCYLMRSHLK 132

Query: 61  ---CKCETFTKNRFSNWKKPKILE------------------SMLEVLIELTTCNQGNYL 99
                 E F    F+NW+K    +                   +++  I LT+       
Sbjct: 133 EHRGSGEAFITEGFTNWRKSDRFQVHVRSVNNAHNQAWRNCQDLMKQKIRLTSILDYIQY 192

Query: 100 RILRFLA--NHNKDIKKVTLKNAPRYNI-LIAPSIQKDIVRACSIETTNTIIKDISDALF 156
            +++ LA   H+++       N    N+ L +P IQKDIVR  + ETT  I+ D+ D  F
Sbjct: 193 LLMQGLAFRGHDENSSSSNKGNFLDGNLKLTSPQIQKDIVRVAAYETTIVILHDLGDDFF 252

Query: 157 AILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGL 216
           AI+ID+S D S+KEQ+VV L+YV++   V+ERFLG   V++T  +SLK AL+ L +K+GL
Sbjct: 253 AIMIDESRDISVKEQMVVALRYVNKKGKVVERFLGIVEVSNTSALSLKSALEALLAKYGL 312

Query: 217 SISRLRGQGHDRASNM 232
           S+SR+RGQG+D ASNM
Sbjct: 313 SLSRIRGQGYDGASNM 328

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32488762|emb|CAE04315.1| OSJNBb0016D16.6 [Oryza sativa Japonica Group]

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 64/295 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
            Y+  GPCQP+ HNF   K   + +RF  +W+ +++  LEYS+ ++ A+C  CYLF+  I
Sbjct: 161 GYIALGPCQPRSHNFPIRKIGGKPRRFLPSWYDEFK-WLEYSVEQDAAFCFICYLFKHKI 219

Query: 61  --CKCETFTKNRFSNW-----------------------------KKPKILESM------ 83
                + F    F NW                              K  I+ES       
Sbjct: 220 NNSGGDAFVNRGFRNWHMRKRIAKHVGGMTSFHNVAQDKYNHFLAPKTNIVESFAATNEQ 279

Query: 84  ---------------LEVLIELTTCNQGNY-----------LRILRFLANHNKDIKKVTL 117
                          L+ L+      +G+Y           L +L  LA + +++ KV L
Sbjct: 280 DKARYMARLTYSMKCLKFLLRQGLAARGHYESEKSLNKGNFLEMLSMLAENFEEVGKVVL 339

Query: 118 KNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQ 177
            NAP+   L AP IQK I   C+ ETT  I++D+ D  FAIL D+S D   KEQ+ + L+
Sbjct: 340 NNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEYFAILADESSDVYQKEQLALCLR 399

Query: 178 YVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           YVD+   V+ERFLG  HV +T +++LK A++ L  +H LS+S++RGQG+D ASNM
Sbjct: 400 YVDKKGRVVERFLGVVHVENTTSLTLKAAIESLLMEHSLSLSKVRGQGYDGASNM 454

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18854992|gb|AAL79684.1|AC087599_3 putative transposase [Oryza sativa Japonica Group]

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 64/295 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
            Y+  GPCQP+ H+F   K   + +RF  +W+ +++  LEYS+ ++ A+C  CYLF+  I
Sbjct: 301 GYIALGPCQPRSHSFPIRKIGGKPRRFLPSWYDEFK-WLEYSVEQDAAFCFICYLFKHKI 359

Query: 61  CKC--ETFTKNRFSNWK-----------------------------KPKILESM------ 83
                + F    F NW                              K  I+ES       
Sbjct: 360 NNSGGDAFVNRGFRNWHMRKRIAKHVGGMTSFHNVAQDKYNHFLAPKTNIVESFAATNEQ 419

Query: 84  ---------------LEVLIELTTCNQGNY-----------LRILRFLANHNKDIKKVTL 117
                          L+ L+      +G+Y           L +L  LA + +++ KV L
Sbjct: 420 DKARYMARLNYSMKCLKFLLRQGLAARGHYESEKSLNKGNFLEMLSMLAENFEEVGKVVL 479

Query: 118 KNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQ 177
            NAP+   L AP IQK I   C+ ETT  I++D+ D  FAIL D+S D   KEQ+ + L+
Sbjct: 480 NNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEYFAILADESSDVYQKEQLALCLR 539

Query: 178 YVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           YVD+   V+ERFLG  HV +T +++LK A++ L  +H LS+S++RGQG+D ASNM
Sbjct: 540 YVDKKGRVVERFLGVVHVENTTSLTLKAAIESLLMEHSLSLSKVRGQGYDGASNM 594

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224042031|gb|ACN38703.1| putative transposase [Oryza sativa Japonica Group]

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 64/295 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
            Y+  GPCQP+ H+F   K   + +RF  +W+ +++  LEYS+ ++ A+C  CYLF+  I
Sbjct: 161 GYIALGPCQPRSHSFPIRKIGGKPRRFLPSWYDEFK-WLEYSVEQDAAFCFICYLFKHKI 219

Query: 61  --CKCETFTKNRFSNW-----------------------------KKPKILESM------ 83
                + F    F NW                              K  I+ES       
Sbjct: 220 NNSGGDAFVNRGFRNWHMRKRIAKHVGGMTSFHNVAQDKYNHFLAPKTNIVESFAATNEQ 279

Query: 84  ---------------LEVLIELTTCNQGNY-----------LRILRFLANHNKDIKKVTL 117
                          L+ L+      +G+Y           L +L  LA + +++ KV L
Sbjct: 280 DKARYMARLTYSMKCLKFLLRQGLAARGHYESEKSLNKGNFLEMLSMLAENFEEVGKVVL 339

Query: 118 KNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQ 177
            NAP+   L AP IQK I   C+ ETT  I++D+ D  FAIL D+S D   KEQ+ + L+
Sbjct: 340 NNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEYFAILADESSDVYQKEQLALCLR 399

Query: 178 YVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           YVD+   V+ERFLG  HV +T +++LK A++ L  +H LS+S++RGQG+D ASNM
Sbjct: 400 YVDKKGRVVERFLGVVHVENTTSLTLKAAIESLLMEHSLSLSKVRGQGYDGASNM 454

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116317825|emb|CAH65861.1| OSIGBa0126J24.6 [Oryza sativa Indica Group]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 62/293 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
           +Y+ +GP QP  H F       + ++F+  WF KY   +EYS+ K  A+C  CYLF    
Sbjct: 118 SYIMKGPYQPYAHAFESRNIGNKPRQFSPLWFYKYP-WIEYSVKKETAFCFVCYLFGKGR 176

Query: 61  CKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNY---------------------- 98
            K   F K  ++NW +   L+  +  +       Q  Y                      
Sbjct: 177 SKTSAFVKGGWNNWNRTDALDLHVGGVASAHNAAQERYNLFITPHGAIDDKIVKVDNEER 236

Query: 99  ----------LRILRF-----------------------------LANHNKDIKKVTLKN 119
                     LR LRF                             LA +N+++ K  LKN
Sbjct: 237 RLYKIRLTYSLRCLRFLLQQGLAFRGTTKVKSLTNRGNFIELLKWLAENNEEVDKFVLKN 296

Query: 120 APRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYV 179
           AP    L +P IQK+I++ C++ET + I+++I D  + IL D+S D S KEQ+ + L+YV
Sbjct: 297 APGNCTLTSPDIQKEIIQCCAMETRDQILEEIGDNYYTILADESSDVSHKEQLALCLRYV 356

Query: 180 DRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           D++    ERFLG   V  T + SLKEA++ L ++HGL+++++RGQG+D ASNM
Sbjct: 357 DKSGRPCERFLGIVQVDDTTSSSLKEAIESLLTRHGLTMTQIRGQGYDGASNM 409

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242080863|ref|XP_002445200.1| hypothetical protein SORBIDRAFT_07g005790 [Sorghum bicolor] gi|241941550|gb|EES14695.1| hypothetical protein SORBIDRAFT_07g005790 [Sorghum bicolor]

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 62/291 (21%)

Query: 2   YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIIC 61
           Y+  GPCQP+ H+F +      ++RF  +WF  Y   LEYS+  + A+C  CYLF++   
Sbjct: 59  YIALGPCQPRGHDFPRKDI-GGKRRFVPSWFDTY-GWLEYSVKLDAAFCFICYLFKSKTA 116

Query: 62  K-CETFTKNRFSNWKKPKILE-----------------------SMLEVLIELTTCNQGN 97
           K   +F    F  W   K  +                       S+   L++ TT  +  
Sbjct: 117 KGGNSFVDGGFRLWNHTKKFDKHAACKSHCLAQEKFDKFSVNGTSISNTLVKRTTQEKVI 176

Query: 98  Y-------LRILRF-----------------------------LANHNKDIKKVTLKNAP 121
           Y       L+ LRF                             LA + +D+ +V LKNAP
Sbjct: 177 YKARLSYSLKCLRFLLRQGLACRGHDESEESLNKGNFLELLNWLAENFEDVNRVGLKNAP 236

Query: 122 RYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDR 181
           + N L +P IQK+++  C+ ETT  II D+ D  FAIL D+S D   KEQ+ + L+YVD+
Sbjct: 237 KNNKLTSPRIQKELINCCAKETTKLIIDDLGDDYFAILADESSDVYQKEQLALCLRYVDK 296

Query: 182 NRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
              V+ERFLG  HV  T + +LK A++ L  +H LS+SR+RGQG+D ASNM
Sbjct: 297 KGQVVERFLGVVHVGDTTSATLKLAIETLLMEHSLSLSRIRGQGYDGASNM 347

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|19225003|gb|AAL86479.1|AC077693_18 putative transposase [Oryza sativa Japonica Group]

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 150/293 (51%), Gaps = 65/293 (22%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
           AY+ +GP Q   H+F   +   +++ FN  WF KYQ  LEYS+ K+  +C+ CYLF +  
Sbjct: 91  AYILKGPNQCYAHDFPVREIYGKKRHFNFVWFHKYQ-WLEYSVAKDAGFCMVCYLFGS-- 147

Query: 61  CKCETFTKNRFSNWKKPKILE-------------------------SMLEVLIELTT--- 92
                F  + + NW K   L+                         S+  V+++++    
Sbjct: 148 -GTSNFVTDGWRNWNKADALDKHVGGITSAHNKAQEKYNLFVSGGPSIDNVIVKVSNESE 206

Query: 93  -----------------CNQG----------------NYLRILRFLANHNKDIKKVTLKN 119
                             NQG                N++ +L++LA +NK++ ++ LKN
Sbjct: 207 IHYKARLTYSLRCLRYLLNQGLAFRGHDESEESSNRGNFIELLKWLAENNKEVDRLVLKN 266

Query: 120 APRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYV 179
           AP   IL   SIQ++I+  C+ ETT  II+++ D  +AIL D+  D S KEQ+ + ++Y+
Sbjct: 267 APGNCILTCSSIQREIIHCCADETTKRIIEELGDDHYAILADECSDLSHKEQLALCVRYI 326

Query: 180 DRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           D+   V ERFLG  HV ST + +LK+A+  L S H LS S++RGQG+D ASNM
Sbjct: 327 DKLGRVCERFLGVVHVASTTSAALKKAILTLLSDHHLSPSQIRGQGYDGASNM 379

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242080751|ref|XP_002445144.1| hypothetical protein SORBIDRAFT_07g004800 [Sorghum bicolor] gi|241941494|gb|EES14639.1| hypothetical protein SORBIDRAFT_07g004800 [Sorghum bicolor]

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 141/293 (48%), Gaps = 62/293 (21%)

Query: 1   AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII 60
           +Y+ +GP QP  H+F       + ++FN  WF KY   +EYS+ K  A+C  CYLF    
Sbjct: 44  SYIIKGPYQPFAHDFESRNIGNKPRQFNPLWFYKYP-WIEYSVKKKTAFCFVCYLFGKGR 102

Query: 61  CKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNY---------------------- 98
            K   F K  ++NW +   L+  +  +       Q  Y                      
Sbjct: 103 SKTSAFVKGGWNNWNRIDALDLHVGGVASAHNAAQERYNFFMTPHGAIDDKIVKVDNEER 162

Query: 99  ----------LRILRF-----------------------------LANHNKDIKKVTLKN 119
                     LR LRF                             LA +N+++ K  LKN
Sbjct: 163 RLYKIRLTYSLRCLRFLLKQGLAFRGHDESEEYSNRGNFIELLKWLAENNEEVDKFVLKN 222

Query: 120 APRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYV 179
           AP    L +P IQK+I++ C++ET + II++I D  + IL D+S D S KEQ+ + L+YV
Sbjct: 223 APGNCTLTSPDIQKEIIQCCAMETRDQIIEEIGDNHYTILADESSDVSHKEQLALCLRYV 282

Query: 180 DRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
           D +    ERFLG   V  T + SLKEA++ L  +HGL+++++RGQG+D ASNM
Sbjct: 283 DNSGRPCERFLGIVLVDDTTSSSLKEAIESLLIRHGLTMTQIRGQGYDGASNM 335

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2118430	664	AT4G09660 [Arabidopsis thalian	0.549	0.209	0.510	3.2e-47
TAIR|locus:2202165	769	AT1G19260 [Arabidopsis thalian	0.549	0.180	0.503	1.9e-46
TAIR|locus:4515102803	592	AT2G06541 [Arabidopsis thalian	0.557	0.238	0.439	3.7e-40
TAIR|locus:2829839	505	AT3G29763 "AT3G29763" [Arabido	0.549	0.275	0.503	7.4e-34
TAIR|locus:2829849	536	AT3G29765 [Arabidopsis thalian	0.422	0.199	0.504	2.6e-23
TAIR|locus:2033523	496	AT1G41920 "AT1G41920" [Arabido	0.549	0.280	0.344	2.5e-21
TAIR|locus:5019474775	393	AT3G31402 "AT3G31402" [Arabido	0.399	0.256	0.431	6.3e-21
TAIR|locus:2036700	206	AT1G42710 "AT1G42710" [Arabido	0.264	0.325	0.477	2.6e-14
UNIPROTKB|E2R5I7	1073	ZMYM1 "Uncharacterized protein	0.553	0.130	0.243	1.5e-13
UNIPROTKB|Q5SW02	1067	ZMYM1 "Zinc finger MYM-type pr	0.541	0.128	0.271	3.1e-12

TAIR|locus:2118430 AT4G09660 [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
 Identities = 71/139 (51%), Positives = 103/139 (74%)

Query:    94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
             N+GN+L +L++ A  N+ +KKV LKNAP+ N + +P IQKDIV   S E T +II+++ +
Sbjct:   166 NKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDN 225

Query:   154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
              +F +L+D+S DAS KEQ+ VV ++VD+   V ERF+G  HV  T ++SLK A+D LF+K
Sbjct:   226 DVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHVKETSSLSLKSAIDSLFAK 285

Query:   214 HGLSISRLRGQGHDRASNM 232
             +GLS+ +LRGQG+D ASNM
Sbjct:   286 YGLSLKKLRGQGYDGASNM 304

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2202165 AT1G19260 [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
 Identities = 70/139 (50%), Positives = 103/139 (74%)

Query:    94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
             N+GN++ +L++ A  N+ +KKV LKNAP+ N + +P IQKDIV   S E T +II+++ +
Sbjct:   202 NKGNFVELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSKEVTRSIIEEMDN 261

Query:   154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
              +F +L+D+S DAS KEQ+ VV ++VD+   V ERF+G  HV  T ++SLK A+D LF+K
Sbjct:   262 DVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAK 321

Query:   214 HGLSISRLRGQGHDRASNM 232
             +GLS+ +LRGQG+D ASNM
Sbjct:   322 YGLSLKKLRGQGYDGASNM 340

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:4515102803 AT2G06541 [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
 Identities = 62/141 (43%), Positives = 97/141 (68%)

Query:    92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDI 151
             + N+GN+L ++++ A  N+ + KV L+NAP+ N ++ P IQ+DIV     E   +II+++
Sbjct:   133 SANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCFVEEVIRSIIQEV 192

Query:   152 SDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLF 211
                +F +++D+S D   KEQ+VVV ++VD++  V ERF+G  HV  T +  LK A+D LF
Sbjct:   193 DHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETFSAFLKCAIDSLF 252

Query:   212 SKHGLSISRLRGQGHDRASNM 232
             +KHGLSI ++RGQ +D ASNM
Sbjct:   253 AKHGLSIKQIRGQDYDGASNM 273

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046983 "protein dimerization activity" evidence=IEA

TAIR|locus:2829839 AT3G29763 "AT3G29763" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 70/139 (50%), Positives = 104/139 (74%)

Query:    94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
             N+GN+L +L+++A  N+ +KKV LKNAP+ N + +P IQKDIV   S E T +II+++ +
Sbjct:    70 NKGNFLELLKYIAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDN 129

Query:   154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
              +F +L+D+S DAS KEQ+ VV ++VD+   V ERF+G  HV  T ++SLK A+D LF+K
Sbjct:   130 DVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAK 189

Query:   214 HGLSISRLRGQGHDRASNM 232
             +GLS+ +LRG+G+D ASNM
Sbjct:   190 YGLSLKKLRGKGYDGASNM 208

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2829849 AT3G29765 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 2.6e-23, P = 2.6e-23
 Identities = 54/107 (50%), Positives = 79/107 (73%)

Query:   126 LIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFV 185
             + +P IQKDIV   S E T +II+++ + +F +L+D+S DAS KEQ+ VV ++VD+   V
Sbjct:     1 MTSPPIQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVV 60

Query:   186 IERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
              ERF+G  HV  T ++SLK A+D LF+K+GLS+ +LRG+G+D ASNM
Sbjct:    61 KERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGKGYDGASNM 107

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2033523 AT1G41920 "AT1G41920" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 50/145 (34%), Positives = 92/145 (63%)

Query:    92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACS--IETTNTIIK 149
             + N+GN+L ++++    N+ I KV L+NAP+ N ++   + + ++      + ++  ++ 
Sbjct:    23 SANRGNFLELVKYTVGQNEVISKVVLENAPKNNQMVFDEMSEPLIPETRDPVPSSFLLLD 82

Query:   150 DISDALFAILIDKSCDASM--KEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEAL 207
              I D  + ++  ++  +++  KEQ+ VV ++VD++  V ERF+G  HV  T + SLK A+
Sbjct:    83 LILD--YPVVWQQTVQSNVSDKEQMAVVFRFVDKHGTVKERFIGLIHVKETSSASLKCAI 140

Query:   208 DQLFSKHGLSISRLRGQGHDRASNM 232
             D LF+K GLS+ +LRGQG+D A+NM
Sbjct:   141 DSLFAKRGLSMKQLRGQGYDGANNM 165

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:5019474775 AT3G31402 "AT3G31402" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
 Identities = 44/102 (43%), Positives = 68/102 (66%)

Query:   146 TIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKE 205
             ++I++I   +F +L+D+S D S KEQ+ +V ++ D++  V ERFL   HV  T  ISLK 
Sbjct:    89 SVIEEIDHNVFGLLVDESADVSDKEQMTLVFRFFDKSGIVKERFLSIIHVKETSAISLKS 148

Query:   206 ALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLK 247
             A+D LF+K+ L+I + RGQG+D      SCK +D+ +EK+ K
Sbjct:   149 AIDDLFAKYRLNIKKGRGQGYDGEIG-ASCKRKDLIREKHRK 189

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2036700 AT1G42710 "AT1G42710" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 32/67 (47%), Positives = 46/67 (68%)

Query:   170 EQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRA 229
             EQ+ VV ++VD++  V ERF+   HV  T + S+K A+D LF+K+GLS+  +RGQG+D A
Sbjct:   120 EQMAVVFRFVDKSGTVKERFIEVVHVKETSSASVKSAIDDLFAKYGLSLKTVRGQGYDGA 179

Query:   230 SNMVSCK 236
             S M   K
Sbjct:   180 SIMKVAK 186

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2R5I7 ZMYM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 146 (56.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 36/148 (24%), Positives = 78/148 (52%)

Query:    90 LTTCNQGNYLRILRFLA-NHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTII 148
             +++ N+GN+L +L   A +  ++I ++       YN   +  IQ DI+     E    I+
Sbjct:   510 ISSMNKGNFLELLEIRAKDKGEEIFRLMNSQVDFYN---STQIQNDIIEIIKTEMLQDIV 566

Query:   149 KDIS-DALFAILIDKSCDASMKEQVVVVLQYVDR-NRFVI--ERFLGSKHVTSTITISLK 204
              +I+  + F+I+ D++ D++ KEQ+ + ++Y  + ++ ++  ERFLG   V       L 
Sbjct:   567 DEINVSSAFSIICDETTDSATKEQLAIYVRYPQKMSKAILIKERFLGFIDVKEMSGTKLH 626

Query:   205 EALDQLFSKHGLSISRLRGQGHDRASNM 232
               +     + G+ ++++ GQ +D  +N+
Sbjct:   627 RTIKTYLQQIGVDLNKICGQAYDSTANL 654

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q5SW02 ZMYM1 "Zinc finger MYM-type protein 1" [Homo sapiens (taxid:9606)]

 Score = 151 (58.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
 Identities = 41/151 (27%), Positives = 85/151 (56%)

Query:    90 LTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIK 149
             +++ N+GN+L +L   A  +K  +   L N+ + +   +  IQ DI+     E    I+ 
Sbjct:   503 VSSVNKGNFLELLEMRAK-DKGEETFRLMNS-QVDFYNSTQIQSDIIEIIKTEMLQDIVN 560

Query:   150 DISDA-LFAILIDKSCDASMKEQVVVVLQYVDRNRFVI---ERFLG---SKHVTST-ITI 201
             +I+D+  F+I+ D++ +++MKEQ+ + ++Y  ++   I   ERFLG   ++ +T T +  
Sbjct:   561 EINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHR 620

Query:   202 SLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
             ++K  L Q+    G+ + ++ GQ +D  +N+
Sbjct:   621 TIKTYLQQI----GVDMDKIHGQAYDSTTNL 647

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	253
pfam14291	179	pfam14291, DUF4371, Domain of unknown function (DU	2e-27
smart00597	91	smart00597, ZnF_TTF, zinc finger in transposases a	5e-09

>gnl|CDD|222655 pfam14291, DUF4371, Domain of unknown function (DUF4371)

 Score =  103 bits (259), Expect = 2e-27
 Identities = 40/68 (58%), Positives = 52/68 (76%)

Query: 165 DASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQ 224
           D S KEQ+ VVL+YVD+   V ERFLG  HV  T +++LK A+D L +KHGLS+S++RGQ
Sbjct: 106 DVSQKEQMAVVLRYVDKKGQVKERFLGVVHVEETTSLTLKSAIDSLLAKHGLSLSKVRGQ 165

Query: 225 GHDRASNM 232
           G+D ASNM
Sbjct: 166 GYDGASNM 173

Length = 179

>gnl|CDD|214739 smart00597, ZnF_TTF, zinc finger in transposases and transcription factors

 Score = 51.7 bits (124), Expect = 5e-09
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 26 RFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIICK-CETFTKNRFSNWKKPKI 79
          RF  +WF ++ + LEYS+ K+ A+C  CYLF+       + F    F +WKK +I
Sbjct: 4  RFQKSWFHQFPDWLEYSVEKDAAFCKYCYLFRPGRDGGSDLFVTEGFCSWKKERI 58

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
PF14291	235	DUF4371: Domain of unknown function (DUF4371)	100.0
smart00597	90	ZnF_TTF zinc finger in transposases and transcript	99.66
PF04937	153	DUF659: Protein of unknown function (DUF 659); Int	97.5
KOG1121	641	consensus Tam3-transposase (Ac family) [Replicatio	87.38

>PF14291 DUF4371: Domain of unknown function (DUF4371)

Probab=100.00  E-value=3.1e-46  Score=321.03  Aligned_cols=146  Identities=34%  Similarity=0.525  Sum_probs=139.5

Q ss_pred             cCCcccHHHHHHHHhhcChhhHHHHhhCCCCcceecChhhHHHHHHHhhhhcccchhhhhcccceeeeccccCCCchHHH
Q 040037           92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQ  171 (253)
Q Consensus        92 ~~n~gnf~~ll~l~~~~~~~l~~~~l~~~~~~~~y~S~~i~~~~i~~i~~~i~~~i~~~i~~~~fSi~~DestDis~~~q  171 (253)
                      +.|+|||++|++++++++|.+.+++....+.+..|+|+++|+++ ++|++.+++.|+++++..+|||++|||||+|+.+|
T Consensus        90 s~n~GNFl~ll~l~~~~d~~l~~~~~~~~~~~~~~~s~~iq~~i-~~~a~~v~~~I~~~v~~~~FSii~DettDis~~eQ  168 (235)
T PF14291_consen   90 SLNNGNFLELLELLAKYDPELKKHLSKNAPKNAKYSSKTIQNEI-EILADHVRQSIVEEVKSKYFSIIVDETTDISNKEQ  168 (235)
T ss_pred             ccccccHHHHHHHHHhhcccchhhhhcccccceeccHHHHHHHH-HHHHHHHHHHHHhhccccceeeeeeccccccccch
Confidence            67899999999999999999999554677788999999999998 99999999999999987799999999999999999


Q ss_pred             HHHHHhhcccchhhhhhhhccccCccccHHHHHHHHHHHHhhcCCCCCCEEEEeccCccccccchhH
Q 040037          172 VVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSR  238 (253)
Q Consensus       172 l~i~vryv~~~~~i~e~fl~~~~~~~~ta~~i~~~i~~~l~~~~l~~~~~~g~~~Dgas~M~G~~~g  238 (253)
                      |+|+||||+.++.|+|+||+|++++++||++|+++|.++|.++|||+++|+||+|||||+|+|+++|
T Consensus       169 l~i~vRyv~~~~~i~E~Fl~f~~~~~~ta~~l~~~i~~~L~~~~l~~~~~~gq~yDgas~M~G~~~G  235 (235)
T PF14291_consen  169 LSICVRYVDKDGKIKERFLGFVELEDTTAESLFNAIKDVLEKLGLDLSNCRGQCYDGASNMSGKHNG  235 (235)
T ss_pred             hhheeeeeccCcceeeeeeeeeccCCccHHHHHHHHHHHHHHcCCCHHHcCcccccChHhheeccCC
Confidence            9999999998888999999999999999999999999999999999999999999999999999987

>smart00597 ZnF_TTF zinc finger in transposases and transcription factors

Probab=99.66  E-value=3.5e-17  Score=119.48  Aligned_cols=61  Identities=33%  Similarity=0.738  Sum_probs=53.8

Q ss_pred             cccCChhHHhccCC-ceeccccCCeEEEeeeccccc-ccccccccccccccCccChhhhhhhhh
Q 040037           24 QQRFNLAWFIKYQN-CLEYSILKNVAYCLCCYLFQT-IICKCETFTKNRFSNWKKPKILESMLE   85 (253)
Q Consensus        24 ~r~F~~~W~~~~r~-WL~ys~~~~~~fC~~C~~f~~-~~~~~~~~~~~g~~~wkk~~~l~~Hi~   85 (253)
                      .|+|+++|+++| + ||+||+.+|++||++|++|.. ..++..+|+++||+||++.+.|++|..
T Consensus         2 ~RrF~~~W~~~~-~~WL~YS~~~D~~fC~~C~lF~~~~~~~~~~f~~~Gf~nwk~~~~l~~H~~   64 (90)
T smart00597        2 PRRFQRSWFKQF-PDWLEYSVEKDKAFCKACYLFRPGRDGDSDLFVTEGFCSWNVERILKQHEV   64 (90)
T ss_pred             CccccccccccC-cchheeecccCcEEEEEEEeeccCCCCCcCcccccCcCcchhhhhHHhhcC
Confidence            599999999999 7 999999999999999999963 224568999999999999977999963

>PF04937 DUF659: Protein of unknown function (DUF 659); InterPro: IPR007021 These are transposase-like proteins with no known function

Probab=97.50  E-value=1.8e-05  Score=63.71  Aligned_cols=87  Identities=23%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             ceeeeccccCCCchHHHHHHHHhhcccchhhhhhhhccccCc--cccHHHHHHHHHHHHhhcCCCCCCEEEEeccCcccc
Q 040037          155 LFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVT--STITISLKEALDQLFSKHGLSISRLRGQGHDRASNM  232 (253)
Q Consensus       155 ~fSi~~DestDis~~~ql~i~vryv~~~~~i~e~fl~~~~~~--~~ta~~i~~~i~~~l~~~~l~~~~~~g~~~Dgas~M  232 (253)
                      -.||++|+++|..+..-+.+.|..  +.+   .-||.-+...  ..||+.|++.+.+++++.|-  +|++.+.+|+|++|
T Consensus        33 Gcsi~~DgWtd~~~~~lInf~v~~--~~g---~~Flksvd~s~~~~~a~~l~~ll~~vIeeVG~--~nVvqVVTDn~~~~  105 (153)
T PF04937_consen   33 GCSIMSDGWTDRKGRSLINFMVYC--PEG---TVFLKSVDASSIIKTAEYLFELLDEVIEEVGE--ENVVQVVTDNASNM  105 (153)
T ss_pred             CEEEEEecCcCCCCCeEEEEEEEc--ccc---cEEEEEEecccccccHHHHHHHHHHHHHHhhh--hhhhHHhccCchhH
Confidence            589999999998877555443322  122   3566666664  47999999999999999874  58999999999999


Q ss_pred             ccchhHHHHHHHhcccce
Q 040037          233 VSCKSRDIFQEKYLKIMT  250 (253)
Q Consensus       233 ~G~~~g~~l~~~~p~~~~  250 (253)
                      .+.  |.+|.+++|.++.
T Consensus       106 ~~a--~~~L~~k~p~ifw  121 (153)
T PF04937_consen  106 KKA--GKLLMEKYPHIFW  121 (153)
T ss_pred             HHH--HHHHHhcCCCEEE
Confidence            765  4688899998753

>KOG1121 consensus Tam3-transposase (Ac family) [Replication, recombination and repair]

Probab=87.38  E-value=0.67  Score=45.40  Aligned_cols=73  Identities=15%  Similarity=0.221  Sum_probs=65.6

Q ss_pred             ceeeeccccCCC-chHHHHHHHHhhcccchhhhhhhhccccCccccHHHHHHHHHHHHhhcCCCCCCEEEEeccC
Q 040037          155 LFAILIDKSCDA-SMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDR  228 (253)
Q Consensus       155 ~fSi~~DestDi-s~~~ql~i~vryv~~~~~i~e~fl~~~~~~~~ta~~i~~~i~~~l~~~~l~~~~~~g~~~Dg  228 (253)
                      ..++.+|.++|. .+...+++..+|++.+...+..++++.-....+++.|+..+..++.+++|. .++...+.|+
T Consensus       166 ~v~lT~d~w~~~~~~~~y~~~t~h~id~~~~l~~~il~~~~~~~~~~~~i~~~~~~~~~~~~i~-~kv~~~~~~n  239 (641)
T KOG1121|consen  166 RVSLTTDLWSDSGTDEGYMVLTAHYIDRDWELHNKILSFCIPPPHLGKALASVLNECLLEWGIE-KKVFSITVDN  239 (641)
T ss_pred             ceEEEEeeecCCCCCcceEEEEEEEeccchHhhhheeeeecCCcchHHHHHHHHHHHHHhhChh-heEEEEeecc
Confidence            889999999987 567888899999999889999999999556799999999999999999998 6788899999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	253
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 55/245 (22%)

Query: 17  KSKFEQQQQRFNLAWFIK-YQNCLEYSILKNV-------AYCLCCYLFQTIICKCETFTK 68
           K +    Q         K Y+NCL   +L NV       A+ L C   + ++    T T+
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL--LVLLNVQNAKAWNAFNLSC---KILL----T-TR 273

Query: 69  NR------FSNWKKPKILESMLEVLIELTTCNQGNYLRIL-RFLANHNKDIKKVTLKNAP 121
            +       +       L+     L             +L ++L    +D+ +  L   P
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEV------KSLLLKYLDCRPQDLPREVLTTNP 327

Query: 122 RYNILIAPSIQKDIVRA-----CSIETTNTIIKDISDAL-----------FAILIDKSCD 165
           R   +IA SI+  +         + +   TII+   + L            ++       
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP---S 384

Query: 166 ASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQG 225
           A +   ++ ++ + D  +  +   +   H  S +    K+  +   S   + +  L+ + 
Sbjct: 385 AHIPTILLSLI-WFDVIKSDVMVVVNKLHKYSLV---EKQPKESTISIPSIYL-ELKVKL 439

Query: 226 HDRAS 230
            +  +
Sbjct: 440 ENEYA 444

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
2bw3_A	534	Transposase; DNA recombination, transposition; 2.0	99.31

>2bw3_A Transposase; DNA recombination, transposition; 2.0A {Musca domestica} SCOP: a.270.1.1 c.55.3.12 PDB: 2bw3_B

Probab=99.31  E-value=4.5e-14  Score=133.07  Aligned_cols=143  Identities=17%  Similarity=0.218  Sum_probs=111.5

Q ss_pred             ccCCcccHHHHHHHHhhcChhhHHHHhhCCCCcceecChhhHHHHHHHhhhhcccchhhhhccc----ceeeeccccCCC
Q 040037           91 TTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISDA----LFAILIDKSCDA  166 (253)
Q Consensus        91 ~~~n~gnf~~ll~l~~~~~~~l~~~~l~~~~~~~~y~S~~i~~~~i~~i~~~i~~~i~~~i~~~----~fSi~~DestDi  166 (253)
                      ...+..+|+++++.+...+|.+.++ +..   +....|.......|..+...+++.+.++++.+    +|||++|++||.
T Consensus        35 ~~ve~~~F~~~l~~l~~~~p~~~~~-~~~---~~~~ps~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~~~sl~~D~wt~~  110 (534)
T 2bw3_A           35 SAVSGSGFIDMIKFFIKVKAEYGEH-VNV---EELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDN  110 (534)
T ss_dssp             GGGGCHHHHHHHHHHHHHHHHHCSC-BCH---HHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEET
T ss_pred             hhhCCHHHHHHHHHHHhhhhhhccc-cch---hhcCCCcccHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEecccCC
Confidence            3556778999999887766755331 110   11123444444445556788888999999873    899999999998


Q ss_pred             -chHHHHHHHHhhcccchhhhhhhhccccCc--cccHHHHHHHHHHHHhhcCCCCCCEEEEeccCccccccchhH
Q 040037          167 -SMKEQVVVVLQYVDRNRFVIERFLGSKHVT--STITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSR  238 (253)
Q Consensus       167 -s~~~ql~i~vryv~~~~~i~e~fl~~~~~~--~~ta~~i~~~i~~~l~~~~l~~~~~~g~~~Dgas~M~G~~~g  238 (253)
                       .+.++|+|+++|+ ++..+++++|++.+++  .+||+.|++.|.++|+++||+..++++..+|||++|.|..+|
T Consensus       111 ~~~~~~l~i~v~~i-~~~~~~~~~L~~~~~~~~~~t~~~i~~~i~~~l~~~~l~~~~~v~~vtDnasn~~~~~~~  184 (534)
T 2bw3_A          111 YIKRNFLGVTLHYH-ENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN  184 (534)
T ss_dssp             TTTEEEEEEEEEEE-ETTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHHTTTCCCCTTCEEEECCCHHHHHHTTT
T ss_pred             CCCcceeEEEEEEe-eCCceEEEEEeEeecCCCCCCHHHHHHHHHHHHHHcCCCcccceeEECCCHHHHHHHHhc
Confidence             5789999999999 4678999999999997  599999999999999999999766777778999999886553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	253
d2bw3a2	447	Transposase Hermes, catalytic domain {House fly (M	99.24

>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Hermes transposase-like
domain: Transposase Hermes, catalytic domain
species: House fly (Musca domestica) [TaxId: 7370]

Probab=99.24  E-value=8.2e-14  Score=123.86  Aligned_cols=90  Identities=19%  Similarity=0.184  Sum_probs=77.9

Q ss_pred             hhhhcccceeeeccccCC-CchHHHHHHHHhhcccchhhhhhhhccccCc--cccHHHHHHHHHHHHhhcCCCCCCEEEE
Q 040037          148 IKDISDALFAILIDKSCD-ASMKEQVVVVLQYVDRNRFVIERFLGSKHVT--STITISLKEALDQLFSKHGLSISRLRGQ  224 (253)
Q Consensus       148 ~~~i~~~~fSi~~DestD-is~~~ql~i~vryv~~~~~i~e~fl~~~~~~--~~ta~~i~~~i~~~l~~~~l~~~~~~g~  224 (253)
                      .+.+....+||.+|++|+ .++..||+|++||++ ++.++|++|+|.++.  .+||++|++.|.++|.++||++.+++|+
T Consensus         5 k~~~~~~~~s~~~D~Wts~~~~~~~l~v~~~yi~-~~~~~~~~L~~~~~~~~~~tg~~i~~~l~~~l~~~~i~~~~~~~~   83 (447)
T d2bw3a2           5 KSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHE-NNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKF   83 (447)
T ss_dssp             HHHHHTTCCEEEEEEEEETTTTEEEEEEEEEEEE-TTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHHTTTCCCCTTCEE
T ss_pred             HHHHHcCCEEEEEEeecCCCCCeEEEEEEEEEEE-CCceeEEEEEEEEeCCCCCcHHHHHHHHHHHHHHcCCCcceEEEE
Confidence            333334489999999665 777899999999997 468999999998884  5799999999999999999999999999


Q ss_pred             eccCccccccchhH
Q 040037          225 GHDRASNMVSCKSR  238 (253)
Q Consensus       225 ~~Dgas~M~G~~~g  238 (253)
                      ++|||++|.|...+
T Consensus        84 ~~D~a~n~~~~~~~   97 (447)
T d2bw3a2          84 VTDRGANVVKSLAN   97 (447)
T ss_dssp             EECCCHHHHHHTTT
T ss_pred             EcCCcHhhHHHhhc
Confidence            99999999987654