Citrus Sinensis ID: 040068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccccccEEEEEEEEEEccccccccEEEEccccccccccccccEEEEccccEEEEcccccccccEEEEEEEccccccEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccEEEEEEEEccccccccEEEEcccccccccccHHHEEEcccccEEEccccccccccEEEEEEEccccccccEEEEEEEcc
Coil and Loop (DISEMBL)
MAAILKFLAAIMLFTIITkgncqctlddikvsqsqtgktvpnkqewRLTLnntcictqlelklsckgfqtvepidpsiiaisgdectvvnngnpfygfTTLSFnyawdtsfpfkpissqiscs
Flexible Loop (DISEMBL)
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVsqsqtgktvpnkqewrlTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPfkpissqiscs
Low Complexity Region (SEG)
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Disordered region (IsUnstruct)
**AILKFLAAIMLFTIITKGNCQCTLDDIKVSQ****KTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFK*********
Disordered Region (DISOPRED)
*AAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Disordered Region (DISEMBL)
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVS*********NKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Disordered Region (DISPRO)
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
A8MS78	127	Uncharacterized protein A	no	no	0.634	0.614	0.341	2e-05

>sp|A8MS78|Y1583_ARATH Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 44  QEWRLTLNNTC-ICTQLELKLSCKGF--QTVEPIDPSIIAISGDECTVVNNGNPFYGFTT 100
           +++R+ + N C +C  + L+L C+GF    V+P    +++ S   C VVN+G P     T
Sbjct: 46  KKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAGNC-VVNDGLPLSPMQT 104

Query: 101 LSFNYAWDTSFPFKPISSQISC 122
           LSFNY+    F  +P+S    C
Sbjct: 105 LSFNYSNTHQFALRPLSWSFQC 126

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
255573171	123	transferase, transferring glycosyl group	0.991	0.991	0.467	3e-28
356534649	121	PREDICTED: uncharacterized protein LOC10	0.983	1.0	0.442	4e-27
224089298	123	predicted protein [Populus trichocarpa]	0.991	0.991	0.459	5e-27
449532246	102	PREDICTED: uncharacterized protein LOC10	0.829	1.0	0.563	2e-26
351724227	124	uncharacterized protein LOC100527363 pre	0.951	0.943	0.436	4e-24
388521591	124	unknown [Lotus japonicus]	0.934	0.927	0.446	5e-22
224103245	122	predicted protein [Populus trichocarpa]	0.967	0.975	0.383	1e-21
356537423	121	PREDICTED: uncharacterized protein LOC10	0.983	1.0	0.373	9e-21
224080576	145	predicted protein [Populus trichocarpa]	0.967	0.820	0.349	5e-20
357451233	123	hypothetical protein MTR_2g063010 [Medic	0.943	0.943	0.406	8e-20

>gi|255573171|ref|XP_002527515.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223533155|gb|EEF34913.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQC-TLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQL 59
           MAA + F++A+ L T+I++G+CQC  + +  +SQSQTG+ + NK EW +T+ N C+CT+ 
Sbjct: 1   MAASIPFISALFLLTLISQGHCQCDNVSNFIISQSQTGQKIANKTEWNVTIKNDCLCTRG 60

Query: 60  ELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQ 119
           E+KL C GFQ  E  DPS++ + G+EC ++NNG   +GF + SF YAW T F FK   S 
Sbjct: 61  EIKLDCTGFQNAENTDPSVLKVIGNEC-LINNGGVLHGFESFSFTYAWYTQFQFKAKDSS 119

Query: 120 ISCS 123
           + CS
Sbjct: 120 VECS 123

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534649|ref|XP_003535865.1| PREDICTED: uncharacterized protein LOC100818721 [Glycine max]

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60
           MAA  K+L  I+  T+I KG+C+C++++I +  +++G+ +  + EW + + N C CTQ +
Sbjct: 1   MAATFKYLFPILFLTLIVKGSCECSINNINIGTTRSGRVIQGQPEWNVVVINNCTCTQSQ 60

Query: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120
           ++LSCKGF+T E + PSI++I GD C ++ NGNP   F T+ F+YAWD  F   P SS I
Sbjct: 61  IRLSCKGFKTSESVSPSILSIEGDSCLLI-NGNPLNSFATVRFSYAWDPPFLLLPTSSSI 119

Query: 121 SC 122
           SC
Sbjct: 120 SC 121

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089298|ref|XP_002308679.1| predicted protein [Populus trichocarpa] gi|222854655|gb|EEE92202.1| predicted protein [Populus trichocarpa]

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 83/124 (66%), Gaps = 2/124 (1%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQCT-LDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQL 59
           MA  L F  A+   ++I++G+CQC    D+K+ QSQT   V NK +W +T+ N C+C+Q+
Sbjct: 1   MAGFLNFPCAVFFLSLISQGHCQCHPTTDLKIFQSQTEVLVQNKPQWEVTIVNDCVCSQV 60

Query: 60  ELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQ 119
            +KL+C GFQTVE ID +I+AI  D C  +N+  P YG+ T +F Y+W   +PF PI S+
Sbjct: 61  NIKLACDGFQTVEEIDSTILAIGDDGCQ-INHEQPVYGYQTFNFTYSWGAQYPFMPIYSE 119

Query: 120 ISCS 123
           I+CS
Sbjct: 120 IACS 123

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532246|ref|XP_004173093.1| PREDICTED: uncharacterized protein LOC101230172, partial [Cucumis sativus]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 1/103 (0%)

Query: 21  NCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIA 80
           NC+C L+DI +SQ+ TG  V  KQ W+ T+ N CIC Q  LKL C GF TV+ +DPSI+A
Sbjct: 1   NCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSSLKLDCNGFNTVQAVDPSILA 60

Query: 81  ISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123
           +SG  C +VN G P +  T +SF YA D +FPFKP+SSQISCS
Sbjct: 61  VSGSVC-LVNGGQPIFQSTPISFTYASDNAFPFKPLSSQISCS 102

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724227|ref|NP_001235003.1| uncharacterized protein LOC100527363 precursor [Glycine max] gi|255632175|gb|ACU16447.1| unknown [Glycine max]

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 80/119 (67%), Gaps = 2/119 (1%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQ-CTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQL 59
           MA   K+  +I+  T++ KG+C  C+L++I +  S+TG+ +  + EW +T+ N C C Q 
Sbjct: 1   MATTFKYFTSILFLTLVIKGSCDDCSLNNINIGTSRTGREIQGQPEWNVTVINNCNCEQS 60

Query: 60  ELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISS 118
           ++KLSCKGFQ+ E +DPSI+++ GD C ++ NGNP  G  T++F+YAWD  F   P SS
Sbjct: 61  QIKLSCKGFQSAESVDPSILSMEGDSCLLI-NGNPMKGSDTVNFSYAWDPPFLLLPTSS 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521591|gb|AFK48857.1| unknown [Lotus japonicus]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 6/121 (4%)

Query: 6   KFLAAIMLFTIITKGNC---QCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELK 62
           K L  +    +I+ G      C++ ++ V Q+QTG  V  K +W +T++NTC C Q ++K
Sbjct: 7   KLLLIVCFLVLISHGYGDIPHCSIKNLSVKQAQTGVKVQGKPQWEVTISNTC-CVQGDVK 65

Query: 63  LSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
           + C+GFQTVE IDP ++ + GD C +VNNGN  Y    +   YAWD SFP  PISSQ+SC
Sbjct: 66  VDCRGFQTVEKIDPDVLKVEGDAC-LVNNGNVIYEDPVI-LTYAWDRSFPLTPISSQVSC 123

Query: 123 S 123
           S
Sbjct: 124 S 124

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103245|ref|XP_002312981.1| predicted protein [Populus trichocarpa] gi|222849389|gb|EEE86936.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60
           MA ++K  AA ++  ++T+G+C C+L++I +   ++G+ +  + +W +T+ N C C Q +
Sbjct: 1   MAGLIKAFAATLVLCLLTRGSCDCSLNNITIGTVRSGREISGQADWNVTVVNNCQCAQSQ 60

Query: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120
           ++LSC GFQTVE IDPSI++  GD C ++ NG+      +++F+YAWD  F   P+ S I
Sbjct: 61  IQLSCMGFQTVENIDPSILSKQGDTCLLI-NGSSLEASASVNFSYAWDPPFLLLPLGSVI 119

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537423|ref|XP_003537227.1| PREDICTED: uncharacterized protein LOC100803432 [Glycine max]

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 2/123 (1%)

Query: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60
           M+   K+L +I+  T+I KG   C L++I    +++G+ +    EW + + N C C Q +
Sbjct: 1   MSTTFKYLYSILFLTLIIKGT-YCNLNNIISGTTRSGRVIRGIPEWNVVVINNCSCAQSK 59

Query: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120
           ++  CK F+T+E + PSI+++ GD C ++ NGNP  GF ++ F+YAWD +F F   SS  
Sbjct: 60  IRFDCKEFRTIEDVSPSILSVQGDSCLLI-NGNPLMGFASVRFSYAWDPAFVFLARSSHT 118

Query: 121 SCS 123
           +CS
Sbjct: 119 TCS 121

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080576|ref|XP_002306168.1| predicted protein [Populus trichocarpa] gi|222849132|gb|EEE86679.1| predicted protein [Populus trichocarpa]

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 24/143 (16%)

Query: 1   MAAILKFLAAIMLFTIITKGN-----------------------CQCTLDDIKVSQSQTG 37
           MA ++K L AI++  + T+G                        C C+L++I +   ++G
Sbjct: 1   MAGLMKALVAILVLCLATRGRYRTFETMKVNHEQGPSSTKDEGLCDCSLNNINIGTVRSG 60

Query: 38  KTVPNKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYG 97
           + +  K EW +T+ N C C Q ++KLSC GFQTVE +DPSI   +GD C ++ NGN    
Sbjct: 61  REISGKPEWNVTVTNNCRCAQSQIKLSCMGFQTVESVDPSIFVKNGDTCLLI-NGNSLEA 119

Query: 98  FTTLSFNYAWDTSFPFKPISSQI 120
             ++ F+YAWD  F   P+ S I
Sbjct: 120 SASVHFSYAWDPPFLLLPVGSVI 142

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451233|ref|XP_003595893.1| hypothetical protein MTR_2g063010 [Medicago truncatula] gi|355484941|gb|AES66144.1| hypothetical protein MTR_2g063010 [Medicago truncatula]

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 6   KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSC 65
           K L  +    ++++G  +C+L D+ V+Q  TG  +    E+ + ++N C C Q  +KL C
Sbjct: 7   KILTLVFFLVLVSQGYSECSLSDLHVTQHPTGIEINQNPEFLVIISNNCPCAQKNVKLEC 66

Query: 66  KGFQTVEPIDPSIIAISGDECTVVNNGNPFY-GFTTLSFNYAWDTSFPFKPISSQISC 122
             FQTVEPIDPSI+++SGD C +V  G P   G  +++F YAW  +FP  PISS   C
Sbjct: 67  LNFQTVEPIDPSILSVSGDVC-IVKGGQPIASGDVSVTFKYAWPHTFPLNPISSDSVC 123

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
TAIR|locus:505006542	124	AT4G32105 [Arabidopsis thalian	0.943	0.935	0.406	1.5e-19
TAIR|locus:2116707	122	AT4G32100 [Arabidopsis thalian	0.926	0.934	0.383	1.4e-18
TAIR|locus:2116612	124	AT4G32110 [Arabidopsis thalian	0.943	0.935	0.381	2.2e-18
TAIR|locus:2116702	124	AT4G32090 [Arabidopsis thalian	0.983	0.975	0.312	3.7e-16
TAIR|locus:1009023131	179	AT1G32583 "AT1G32583" [Arabido	0.780	0.536	0.303	3.3e-08
TAIR|locus:1006230300	176	TPD1 "AT4G24972" [Arabidopsis	0.788	0.551	0.304	2.3e-07

TAIR|locus:505006542 AT4G32105 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 48/118 (40%), Positives = 65/118 (55%)

Query:     6 KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI-CTQLELKLS 64
             K L  ++    + +G   C L+ + V QS+TGK V NK EW + + N C  C     KLS
Sbjct:     7 KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query:    65 CKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             C GFQ+V P+  S+++ SGD C ++N GN  +      FNY WDTSF  K I   I C
Sbjct:    67 CVGFQSVTPVATSLLSKSGDIC-LLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2116707 AT4G32100 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 46/120 (38%), Positives = 70/120 (58%)

Query:     6 KFLAAIMLFTIITKG--NCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKL 63
             KFL  ++LF  +T+G  +   +L+ + V QS+TG  V NK EW + + N+  C      L
Sbjct:     7 KFLCLVLLFAFVTQGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHTTL 66

Query:    64 SCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123
             SC  F++V PID  +++ SGD C ++ NG+  +    +SF Y WDTSF  K +   I+CS
Sbjct:    67 SCVRFKSVTPIDSKVLSKSGDTC-LLGNGDSIHD---ISFKYVWDTSFDLKVVDGYIACS 122

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2116612 AT4G32110 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 45/118 (38%), Positives = 62/118 (52%)

Query:     6 KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI-CTQLELKLS 64
             K L  ++    + +G   C+L+ + V QS+TGK V NK EW + + N C  C     +L 
Sbjct:     7 KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query:    65 CKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             C GF +V PID S++  SGD C +VN G        + F Y WDTSF  K I   + C
Sbjct:    67 CVGFNSVTPIDTSLLLKSGDAC-LVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2116702 AT4G32090 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 39/125 (31%), Positives = 68/125 (54%)

Query:     1 MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60
             MA  LK    ++L ++++ G C CT   I++   +TG+ +  + EW++T+ NTC C Q  
Sbjct:     1 MAFALKCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query:    61 LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120
             + LSC GF   +P+ P ++   G+ C ++  G       T  F YA    + F+P+ S++
Sbjct:    61 VTLSCGGFAPAKPVKPLLLQPQGNTCLMIK-GAALPAGATAQFTYAGQP-YIFRPVGSKV 118

Query:   121 --SCS 123
               SC+
Sbjct:   119 DPSCT 123

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:1009023131 AT1G32583 "AT1G32583" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 31/102 (30%), Positives = 51/102 (50%)

Query:    24 CTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI--CTQLELKLSCKGFQTVEPIDPSIIA- 80
             C+ DDI + Q  T         + + + N+C+  C   E+ +SC  F +V  ++P +   
Sbjct:    80 CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query:    81 ISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             +  D+C +VN+G P     +LSF YA   S+P    S  +SC
Sbjct:   140 LDYDDC-LVNDGQPLGPGQSLSFQYANSFSYPLSVAS--VSC 178

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009408 "response to heat" evidence=IEP

TAIR|locus:1006230300 TPD1 "AT4G24972" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 32/105 (30%), Positives = 58/105 (55%)

Query:    23 QCTLDDIKVSQSQTGKTVPNK-QEWRLTLNNTCI--CTQLELKLSCKGFQTVEPIDPSII 79
             +C   DI V+Q+ T + +PN    + + + N C+  C    + ++C  F + + I+P + 
Sbjct:    76 KCKSTDIVVNQAVT-EPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVF 134

Query:    80 A-ISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123
               I  D+C +VNNG P    +TLSF+YA   +FP+    + ++C+
Sbjct:   135 KRIHYDDC-LVNNGKPLPFGSTLSFHYA--NTFPYHLSVAFVTCA 176


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       123   0.00091  102 3  11 22  0.48    30
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.69u 0.15s 12.84t   Elapsed:  00:00:01
  Total cpu time:  12.69u 0.15s 12.84t   Elapsed:  00:00:01
  Start:  Fri May 10 01:30:58 2013   End:  Fri May 10 01:30:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0001709 "cell fate determination" evidence=IMP

GO:0048653 "anther development" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
PF09478	80	CBM49: Carbohydrate binding domain CBM49; InterPro	97.03
PLN02171	629	endoglucanase	92.13

>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity

Probab=97.03  E-value=0.0039  Score=41.76  Aligned_cols=73  Identities=16%  Similarity=0.242  Sum_probs=55.1

Q ss_pred             eeEEEeecCCCCCC---eeeEEEEEeeccccccccEEEEcCCcc-cccccCCCceEEeCCeeEEc-cCCcccCCCCeEEE
Q 040068           29 IKVSQSQTGKTVPN---KQEWRLTLNNTCICTQLELKLSCKGFQ-TVEPIDPSIIAISGDECTVV-NNGNPFYGFTTLSF  103 (123)
Q Consensus        29 i~V~Q~~tg~~~~G---~p~~~VtI~N~C~C~~~~V~l~C~gF~-S~~~VdP~i~r~~~d~C~Lv-n~G~pi~~~~~v~F  103 (123)
                      |+|.|..++.+..|   ..+|.|+|+|++.=+++++++.-+.+. +.=    .+-+..++.. -+ +--.+|.+|++.+|
T Consensus         1 i~i~q~~~~sW~~~g~~y~qy~v~I~N~~~~~I~~~~i~~~~l~~~iW----~l~~~~~~~y-~lPs~~~~i~pg~s~~F   75 (80)
T PF09478_consen    1 ITITQTLVNSWTENGQTYTQYDVTITNNGSKPIKSLKISIDNLYGSIW----GLDKVSGNTY-TLPSYQPTIKPGQSFTF   75 (80)
T ss_pred             CEEEEEEEeEEEeCCEEEEEEEEEEEECCCCeEEEEEEEECccchhhe----eEEeccCCEE-ECCccccccCCCCEEEE
Confidence            68899998888775   457999999999999999999998765 111    2222335665 55 43459999999999


Q ss_pred             Eee
Q 040068          104 NYA  106 (123)
Q Consensus       104 ~Ya  106 (123)
                      -|-
T Consensus        76 GYI   78 (80)
T PF09478_consen   76 GYI   78 (80)
T ss_pred             EEE
Confidence            995

A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This domain is found at the C-terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose []. ; GO: 0030246 carbohydrate binding, 0005576 extracellular region

>PLN02171 endoglucanase

Probab=92.13  E-value=0.51  Score=42.96  Aligned_cols=77  Identities=18%  Similarity=0.124  Sum_probs=54.3

Q ss_pred             CceeEEEeecCCCCC---CeeeEEEEEeeccccccccEEEEcCCcccccccCCCceEEeCCeeEEccCCc-ccCCCCeEE
Q 040068           27 DDIKVSQSQTGKTVP---NKQEWRLTLNNTCICTQLELKLSCKGFQTVEPIDPSIIAISGDECTVVNNGN-PFYGFTTLS  102 (123)
Q Consensus        27 sdi~V~Q~~tg~~~~---G~p~~~VtI~N~C~C~~~~V~l~C~gF~S~~~VdP~i~r~~~d~C~Lvn~G~-pi~~~~~v~  102 (123)
                      +.|+|.|..++.+..   +..+|+|+|+|++..+.+++++.=..+-.    |=.=+...++.. -+-+-. .|.+|++.+
T Consensus       535 ~ei~i~q~v~~sW~~~g~~y~qy~v~I~N~s~~~ik~i~i~~~~~~~----~iW~v~~~~ngy-tlPs~~~sL~aG~s~t  609 (629)
T PLN02171        535 SPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISKLYG----PLWGLTKAGYGY-VLPSWMPSLPAGKSLE  609 (629)
T ss_pred             ceeEEEEEEEEEEEcCCceEEEEEEEEEECCCCceeeeeeeeccccc----cchheeecCCcc-cCchhhcccCCCCeeE
Confidence            358999999988875   47889999999999999999996544421    111111233442 444443 788899999


Q ss_pred             EEeecC
Q 040068          103 FNYAWD  108 (123)
Q Consensus       103 F~Yaw~  108 (123)
                      |-|=..
T Consensus       610 FgyI~~  615 (629)
T PLN02171        610 FVYVHS  615 (629)
T ss_pred             EEeecC
Confidence            999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00