Citrus Sinensis ID: 040100

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGAMSTGQLSNLMCAPD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEEEccccHHHcccccccccccccHHHHHHHHHHHHHccccccccccHHHHccccEEEEEccccHHHHHcccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHcccHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEccccccccccccEEEEEcccHHHHcccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccHHHHccccHHcHHHHHHHHHHHHHHccEEEccccEEEEEccHHHHHHHHHHHHccHHHHHHHHcccc
Coil and Loop (DISEMBL)
mafapdgliegfydpeaynpregkfLVGLQFhsermrlssseefdypgcpiAVIAYQKRmnrasyvpnfiplkqkigkskvlvksfspakdinisgqtahpseeSELQAVAEFLesdiaapgfQEYEMSLRLMQMGAAVRNSSSYLRMklnpdkmlpsnvlgamstgqlsnlmcapd
Flexible Loop (DISEMBL)
mafapdgliegfydpeaynPREGKFLVGLQFHSERMRLSsseefdypgCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGamstgqlsnlmcapd
Low Complexity Region (SEG)
MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGAMSTGQLSNLMCAPD
Disordered region (IsUnstruct)
*******LIEGFYDPEAYNPREGKFLVGLQFHSERM*****EEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKS***************************FLESDIAAPGFQEYEMSLRLM********************************************
Disordered Region (DISOPRED)
*A*APDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR****EEFDYPGCPIAVIAYQKRMN********************LVKSFSPAK***********************LESDIA************LMQMGAAVRNSSSYL******************STGQLSNLMCAP*
Disordered Region (DISEMBL)
MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISG**********LQAVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGAMSTGQLSNLMCAPD
Disordered Region (DISPRO)
*AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISG************AVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPS*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGAMSTGQLSNLMCAPD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
255551442	426	Gamma-glutamyl-gamma-aminobutyrate hydro	0.954	0.396	0.551	4e-46
356569047	425	PREDICTED: putative glutamine amidotrans	0.954	0.397	0.519	5e-42
359488254	427	PREDICTED: uncharacterized protein LOC10	0.954	0.395	0.543	2e-41
224065246	426	predicted protein [Populus trichocarpa]	0.954	0.396	0.527	2e-41
356499608	425	PREDICTED: putative glutamine amidotrans	0.954	0.397	0.513	2e-41
356573837	435	PREDICTED: putative glutamine amidotrans	0.954	0.388	0.524	5e-41
449442070	429	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.954	0.393	0.518	2e-40
449490203	424	PREDICTED: LOW QUALITY PROTEIN: putative	0.954	0.398	0.518	2e-40
255572166	432	Gamma-glutamyl-gamma-aminobutyrate hydro	0.954	0.391	0.524	4e-40
218187477	426	hypothetical protein OsI_00310 [Oryza sa	0.954	0.396	0.529	4e-40

>gi|255551442|ref|XP_002516767.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] gi|223544140|gb|EEF45665.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]

 Score =  189 bits (480), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 131/183 (71%), Gaps = 14/183 (7%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCP-------IAV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR S ++EFDYPGCP        AV
Sbjct: 220 MAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRRSDTDEFDYPGCPKAYQEFVKAV 279

Query: 54  IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAE 112
           IAYQK++N  + V   I L Q++  K KV+++SFS A+++  +G+  HPS+ SEL+A AE
Sbjct: 280 IAYQKKLNSVTSVTKPIKLNQEMEKKRKVIIRSFSLARNLYSNGKEMHPSKHSELEAGAE 339

Query: 113 FLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQLS 170
           FLES+ A    QE     RL QMGA VRN  SY+ ++K N ++ +L  NV+G MS GQLS
Sbjct: 340 FLESNTALSLQQE----TRLKQMGATVRNGGSYIEKLKFNEEREILARNVMGKMSAGQLS 395

Query: 171 NLM 173
           +L+
Sbjct: 396 DLL 398

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569047|ref|XP_003552718.1| PREDICTED: putative glutamine amidotransferase-like protein RP404-like [Glycine max]

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/183 (51%), Positives = 130/183 (71%), Gaps = 14/183 (7%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 220 MAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRKPDSDEFDYPGCPFAYKEFVKAV 279

Query: 54  IAYQKRMNRASYVPNFIPLKQKIG-KSKVLVKSFSPAKDINISGQTAHPSEESELQAVAE 112
           +AYQK++N  + V   I L +++  K K++V+SFS AK++  +G+  + S+++EL+A AE
Sbjct: 280 VAYQKKLNNLASVQKPIKLNKEMEIKRKIIVRSFSLAKNLYNTGRGTNSSKQTELEAGAE 339

Query: 113 FLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQLS 170
           FLES+ A    QE     RL QMGA VRN+ SY+ R+KLN ++  +  N++G M+  QLS
Sbjct: 340 FLESNTALSVQQEN----RLKQMGATVRNAGSYIERLKLNEEREKMARNLMGKMTVEQLS 395

Query: 171 NLM 173
           +L+
Sbjct: 396 DLL 398

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488254|ref|XP_002280944.2| PREDICTED: uncharacterized protein LOC100253189 [Vitis vinifera] gi|296087253|emb|CBI33627.3| unnamed protein product [Vitis vinifera]

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/184 (54%), Positives = 127/184 (69%), Gaps = 15/184 (8%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCP-------IAV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 220 MAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRRPDSDEFDYPGCPSAYQEFAKAV 279

Query: 54  IAYQKRMNRASYV-PNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAVA 111
           IAYQK++N ++ + P  + L Q++  + K++V+SFS AKDI  +G+  +PS+ESEL+A A
Sbjct: 280 IAYQKKLNCSTALPPKPLKLDQEMENRRKIIVRSFSIAKDIYTTGRGMNPSKESELEAGA 339

Query: 112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDKMLPSNVL-GAMSTGQL 169
           EFLES+      QE     RL QMGA VRN SSY  R+K+N ++   +  L   MS  QL
Sbjct: 340 EFLESNTVLSLQQEN----RLKQMGATVRNGSSYFQRLKMNEERDRAAKTLMRKMSVEQL 395

Query: 170 SNLM 173
           S LM
Sbjct: 396 SELM 399

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065246|ref|XP_002301736.1| predicted protein [Populus trichocarpa] gi|222843462|gb|EEE81009.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/184 (52%), Positives = 129/184 (70%), Gaps = 15/184 (8%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCP-------IAV 53
           MAFAPDGLIEGFYDP+A NP EGKF++GLQFH ERMR   +++FDYPGCP        AV
Sbjct: 220 MAFAPDGLIEGFYDPDACNPEEGKFIMGLQFHPERMRQDDTDKFDYPGCPRAYQEFVKAV 279

Query: 54  IAYQKRMNRASY-VPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAVA 111
           IAYQK++N ++  VP  + L Q +  K K +++SF  A++I  +GQ  +PS+ESELQA A
Sbjct: 280 IAYQKKLNSSTTSVPRPLKLDQAMEKKRKNIIRSFFLARNIYTTGQRMNPSKESELQAGA 339

Query: 112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDKM-LPSNVLGAMSTGQL 169
           EFLES+ A    QE     RL QMGA VRN+ SY+ R+++N ++  L  NV+G MS  QL
Sbjct: 340 EFLESNTALSLQQEN----RLKQMGATVRNAGSYIERLRMNEEREDLAKNVMGNMSVEQL 395

Query: 170 SNLM 173
           S+++
Sbjct: 396 SDML 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499608|ref|XP_003518630.1| PREDICTED: putative glutamine amidotransferase-like protein RP404-like [Glycine max]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/183 (51%), Positives = 128/183 (69%), Gaps = 14/183 (7%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           M FAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 220 MVFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRKPDSDEFDYPGCPFAYKEFVKAV 279

Query: 54  IAYQKRMNRASYVPNFIPLKQKIG-KSKVLVKSFSPAKDINISGQTAHPSEESELQAVAE 112
           +A+QK++N  + V   I L +++  K K++V+SFS AK++ I+G+  +  +E+EL+A AE
Sbjct: 280 VAHQKKLNSLTSVQKPIKLNKEMEIKRKIIVRSFSLAKNLYIAGRGTNSPKETELEAGAE 339

Query: 113 FLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQLS 170
           FLES+ A    QE     RL QMGA VRN+ SY+ R+KLN ++  +  NV+  M+  QLS
Sbjct: 340 FLESNTALSVQQEN----RLKQMGATVRNAGSYIERLKLNEEREKMARNVMAKMTVEQLS 395

Query: 171 NLM 173
           +L+
Sbjct: 396 DLL 398

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573837|ref|XP_003555062.1| PREDICTED: putative glutamine amidotransferase-like protein RP404-like [Glycine max]

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 125/183 (68%), Gaps = 14/183 (7%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFA DGLIEGFYDPE YNP++GKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 230 MAFASDGLIEGFYDPECYNPQDGKFIMGLQFHPERMRKPDSDEFDYPGCPFAYKEFVKAV 289

Query: 54  IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAE 112
           IAYQK++N  + VP  + L +++  K K++V+SFS AK++   G+    S++SEL+  AE
Sbjct: 290 IAYQKKLNSLTSVPKPLKLNKEMESKRKIIVRSFSLAKNLYTMGRGNCSSKDSELEIGAE 349

Query: 113 FLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQLS 170
           FLES+ A    QE     RL QMGA VRN  SY+ R+KLN  +  +  NV+G MS  QLS
Sbjct: 350 FLESNTALSVQQEN----RLKQMGATVRNGGSYVERLKLNEVREKMAKNVMGKMSVEQLS 405

Query: 171 NLM 173
           +L+
Sbjct: 406 DLL 408

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442070|ref|XP_004138805.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101215742 [Cucumis sativus]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 125/185 (67%), Gaps = 16/185 (8%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 226 MAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRHPDSDEFDYPGCPAAYQQFVKAV 285

Query: 54  IAYQKRMN--RASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAV 110
           +AYQK++N  + S     + L  ++  K K++V+SFS AK++  +G+ A P +E EL+  
Sbjct: 286 VAYQKKLNSSKLSAPKKTLKLDNEMEKKRKIIVRSFSLAKNLYTTGRDAQPEKEPELEIG 345

Query: 111 AEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQ 168
           AEFLES+ A    QE     RL QMGA VRN SSY+ ++KLN  +     NV+G M+  Q
Sbjct: 346 AEFLESNTALSVQQEN----RLKQMGATVRNGSSYIEKLKLNEARERTAKNVMGKMTIDQ 401

Query: 169 LSNLM 173
           LS+L+
Sbjct: 402 LSDLL 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490203|ref|XP_004158536.1| PREDICTED: LOW QUALITY PROTEIN: putative glutamine amidotransferase-like protein RP404-like [Cucumis sativus]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 125/185 (67%), Gaps = 16/185 (8%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S+EFDYPGCP        AV
Sbjct: 221 MAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRHPDSDEFDYPGCPAAYQQFVKAV 280

Query: 54  IAYQKRMN--RASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAV 110
           +AYQK++N  + S     + L  ++  K K++V+SFS AK++  +G+ A P +E EL+  
Sbjct: 281 VAYQKKLNSSKLSAPKKTLKLDNEMEXKRKIIVRSFSLAKNLYTTGRDAQPEKEPELEIG 340

Query: 111 AEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQ 168
           AEFLES+ A    QE     RL QMGA VRN SSY+ ++KLN  +     NV+G M+  Q
Sbjct: 341 AEFLESNTALSVQQEN----RLKQMGATVRNGSSYIEKLKLNEARERTAKNVMGKMTIDQ 396

Query: 169 LSNLM 173
           LS+L+
Sbjct: 397 LSDLL 401

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572166|ref|XP_002527023.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] gi|223533658|gb|EEF35395.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]

 Score =  169 bits (428), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 125/183 (68%), Gaps = 14/183 (7%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFAPDGLIEGFYDP+AYNP EGKF++GLQFH ERMR   S++FDYPGCP        AV
Sbjct: 226 MAFAPDGLIEGFYDPDAYNPDEGKFIMGLQFHPERMRHQDSDDFDYPGCPAAYKEFVKAV 285

Query: 54  IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAE 112
           IAY+KR+N ++ VP    L Q++  K K +V+SFS A+D+  SG+     +E EL+  AE
Sbjct: 286 IAYKKRLNCSACVPKAPKLNQELETKRKTIVRSFSIARDMYNSGRGMPLGQEPELEVGAE 345

Query: 113 FLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDK-MLPSNVLGAMSTGQLS 170
           FLE++ A    QE     RL QMGA VRN+S Y  R+K+N ++  +   V+G MS GQLS
Sbjct: 346 FLEANTALSLQQEN----RLKQMGATVRNASVYRERLKMNEERERIARIVMGKMSIGQLS 401

Query: 171 NLM 173
           +L+
Sbjct: 402 DLI 404

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218187477|gb|EEC69904.1| hypothetical protein OsI_00310 [Oryza sativa Indica Group]

 Score =  169 bits (428), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 130/185 (70%), Gaps = 16/185 (8%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
           MAFAPDGL+EGFYDP+AYNP EGKF++GLQFH ERMR + S+EFDYPGCP+       AV
Sbjct: 219 MAFAPDGLVEGFYDPDAYNPGEGKFIMGLQFHPERMRKAGSDEFDYPGCPMAYQAFVRAV 278

Query: 54  IAYQKRMNRASYVPNFIPLKQKIGKS-KVLVKSFSPAKDINISGQ---TAHPSEESELQA 109
           +AYQ+++  A+ +P    L Q++ K  KVLV+SFS AK++ +SG    T  P+E+ +L A
Sbjct: 279 VAYQEKLAAAAAMPASPKLNQEMEKQRKVLVRSFSLAKNLYVSGAEAGTPRPAEQRDLDA 338

Query: 110 VAEFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDKMLPSNVLGA-MSTG 167
            AEFLES+ AA   Q+ +   RL QMGA VRN+S Y+ R+KLN ++   +  L A MS  
Sbjct: 339 GAEFLESNTAALSVQQEK---RLKQMGATVRNASGYINRLKLNEEREAAARALMAKMSID 395

Query: 168 QLSNL 172
           QLS+L
Sbjct: 396 QLSDL 400

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
TAIR|locus:2176742	436	AT5G38200 [Arabidopsis thalian	0.954	0.387	0.510	3.7e-39
TAIR|locus:2033324	433	AT1G66860 [Arabidopsis thalian	0.954	0.390	0.483	4e-35
TAIR|locus:2196174	395	GAT1_2.1 "AT1G15040" [Arabidop	0.762	0.341	0.436	1.3e-21

TAIR|locus:2176742 AT5G38200 [Arabidopsis thaliana (taxid:3702)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 94/184 (51%), Positives = 124/184 (67%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIA-------V 53
             MAFA DGL+EGFYDP+AYNP EGKF++GLQFH ERMR    +EFDYPGCP A       V
Sbjct:   228 MAFAADGLMEGFYDPDAYNPEEGKFIMGLQFHPERMRQHDLDEFDYPGCPAAYQEFAKAV 287

Query:    54 IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTA-HPSEESELQAVA 111
             IAYQK++N +  VP  + L  ++  K K+LV+SFS AK + + G    +PS+ESEL+  A
Sbjct:   288 IAYQKKLNSSLSVPKTLKLDSEMENKRKMLVRSFSLAKYMYVRGAPGKNPSKESELEVGA 347

Query:   112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLR-MKLNPDKM-LPSNVLGAMSTGQL 169
             EFLES+ A    QE    +RL +MGA VRN  SY++ +K++ DK  +  N++  M+  QL
Sbjct:   348 EFLESNTALSAEQE----MRLKEMGATVRNGGSYMKKLKVDEDKQRMARNMMKKMNIEQL 403

Query:   170 SNLM 173
             S LM
Sbjct:   404 SELM 407

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2033324 AT1G66860 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 89/184 (48%), Positives = 120/184 (65%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIA-------V 53
             MAFAPDGLIEGFYDP+ YNP EGKFL+GLQFH ERMR + S+EFD+PGCP+A       V
Sbjct:   224 MAFAPDGLIEGFYDPDMYNPEEGKFLMGLQFHPERMRKNGSDEFDFPGCPVAYQEFAKAV 283

Query:    54 IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINI-SGQTAHPSEESELQAVA 111
             IA QK++N    VP  + L  ++  K K+LV+SFS A+ +   S    + S ESEL+  A
Sbjct:   284 IACQKKVNSFLSVPKKLELNPEMENKRKILVRSFSLARSMYTRSHSLKNQSTESELEVGA 343

Query:   112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDKMLPS-NVLGAMSTGQL 169
             EFLES+ A    QE    +RL +MGA +RN  S+  +++L+  K   + N++  M+  +L
Sbjct:   344 EFLESNTALSVQQE----MRLKEMGATMRNGGSFTEKLRLDEKKQRKAMNIMKNMNIERL 399

Query:   170 SNLM 173
             S LM
Sbjct:   400 SELM 403

GO:0005634 "nucleus" evidence=ISM

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2196174 GAT1_2.1 "AT1G15040" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 1.3e-21, P = 1.3e-21
 Identities = 65/149 (43%), Positives = 85/149 (57%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
             MA+APDGLIEGFYDP  Y+P+EG+FL+GLQFH ERMRL  S+EFDYPGC +       AV
Sbjct:   215 MAYAPDGLIEGFYDPNRYDPKEGQFLMGLQFHPERMRLPGSDEFDYPGCALVYQEFVKAV 274

Query:    54 IAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEF 113
             IA+QK+   A+ V     +K+K   +  LVKSFS A+ +  +   +   E    Q  A  
Sbjct:   275 IAFQKKQVNATQVE----MKRK---TTTLVKSFSQAEFLEANTVLSKQQENRLKQMGATV 327

Query:   114 LESDIAAPGFQEYEMSLRLMQMGAAVRNS 142
               S +     +  E   R M   +A R S
Sbjct:   328 RNSCVYMKRMKMKEEQERAMDKLSAERLS 356


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      177       177   0.00084  109 3  11 22  0.43    32
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  133 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.72u 0.18s 17.90t   Elapsed:  00:00:01
  Total cpu time:  17.72u 0.18s 17.90t   Elapsed:  00:00:01
  Start:  Mon May 20 18:18:41 2013   End:  Mon May 20 18:18:42 2013

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:2000032 "regulation of secondary shoot formation" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	177
cd01745	189	cd01745, GATase1_2, Subgroup of proteins having th	2e-06
pfam07722	219	pfam07722, Peptidase_C26, Peptidase C26	0.004

>gnl|CDD|153216 cd01745, GATase1_2, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSE 42
            A APDG+IE    P+        F++G+Q+H E +  +  +
Sbjct: 145 EARAPDGVIEAIESPDR------PFVLGVQWHPEWLADTDPD 180

This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Length = 189

>gnl|CDD|219535 pfam07722, Peptidase_C26, Peptidase C26

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSE 34
            A APDG IE    P A       F++G+Q+H E
Sbjct: 191 EATAPDGTIEAIESPNAP-----YFVLGVQWHPE 219

These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus. Length = 219

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
PLN02327	557	CTP synthase	98.11
PRK05380	533	pyrG CTP synthetase; Validated	98.03
PRK07765	214	para-aminobenzoate synthase component II; Provisio	97.95
PRK11366	254	puuD gamma-glutamyl-gamma-aminobutyrate hydrolase;	97.94
COG2071	243	Predicted glutamine amidotransferases [General fun	97.56
PRK14607	534	bifunctional glutamine amidotransferase/anthranila	97.47
TIGR01823	742	PabB-fungal aminodeoxychorismate synthase, fungal	97.4
PRK09065	237	glutamine amidotransferase; Provisional	97.3
COG0504	533	PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide	97.07
PRK09522	531	bifunctional glutamine amidotransferase/anthranila	97.03
PRK07567	242	glutamine amidotransferase; Provisional	97.0
PLN02347	536	GMP synthetase	96.96
PRK00074	511	guaA GMP synthase; Reviewed	96.95
PLN02889	918	oxo-acid-lyase/anthranilate synthase	96.54
PRK06490	239	glutamine amidotransferase; Provisional	96.53
KOG2387	585	consensus CTP synthase (UTP-ammonia lyase) [Nucleo	96.43
PLN02335	222	anthranilate synthase	96.34
PRK05665	240	amidotransferase; Provisional	95.83
cd01747	273	GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot	95.83
PLN02617	538	imidazole glycerol phosphate synthase hisHF	95.48
PRK08250	235	glutamine amidotransferase; Provisional	95.35
CHL00197	382	carA carbamoyl-phosphate synthase arginine-specifi	94.83
PRK07053	234	glutamine amidotransferase; Provisional	93.02
PRK07649	195	para-aminobenzoate/anthranilate synthase glutamine	91.73
KOG0370	1435	consensus Multifunctional pyrimidine synthesis pro	86.07
PLN02832	248	glutamine amidotransferase subunit of pyridoxal 5'	84.98
KOG1559	340	consensus Gamma-glutamyl hydrolase [Coenzyme trans	81.58
TIGR01815	717	TrpE-clade3 anthranilate synthase, alpha proteobac	81.52

>PLN02327 CTP synthase

Probab=98.11  E-value=1.3e-06  Score=82.76  Aligned_cols=37  Identities=24%  Similarity=0.241  Sum_probs=30.1

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHH
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKR   59 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk   59 (177)
                      ++|++|||||||++........-|.+|.+||..+.+.
T Consensus       516 ~pffvGVQfHPE~~s~p~~~~pLF~~Fv~Aa~~~~~~  552 (557)
T PLN02327        516 HPFFVGVQFHPEFKSRPGKPSPLFLGLIAAASGQLDA  552 (557)
T ss_pred             CCEEEEEEcCCCCCCCCCCchHHHHHHHHHHHHhHHh
Confidence            7899999999999987655555699999999875554

>PRK05380 pyrG CTP synthetase; Validated

Probab=98.03  E-value=1.5e-06  Score=81.91  Aligned_cols=37  Identities=27%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHH
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKR   59 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk   59 (177)
                      ++|++|||||||++........-|.+|..||..++++
T Consensus       496 hpfflGVQwHPE~~s~p~~~~pLF~~FV~Aa~~~~~~  532 (533)
T PRK05380        496 HPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALENKKR  532 (533)
T ss_pred             CCEEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHhhc
Confidence            6799999999999876554445689999999887654

>PRK07765 para-aminobenzoate synthase component II; Provisional

Probab=97.95  E-value=5.4e-06  Score=68.02  Aligned_cols=30  Identities=30%  Similarity=0.383  Sum_probs=25.0

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++||.||||+.++      .+ ++|||||||.+.
T Consensus       148 la~s~~~~vqa~~~~~------~~-i~gvQfHPE~~~  177 (214)
T PRK07765        148 TARTDSGVIMAVRHRE------LP-IHGVQFHPESVL  177 (214)
T ss_pred             EEEcCCCcEEEEEeCC------CC-EEEEeeCCCccc
Confidence            3678999999999876      44 899999999753

>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional

Probab=97.94  E-value=3.1e-06  Score=71.17  Aligned_cols=38  Identities=18%  Similarity=0.174  Sum_probs=28.4

Q ss_pred             CCcEEEeccCCcccccCCCC-CCCCCChHHHHHHHHHHh
Q 040100           23 GKFLVGLQFHSERMRLSSSE-EFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~-~fDy~g~~~Av~ayqkk~   60 (177)
                      .+|++|||||||++...+.. ..-|..|.+||+.+.+.+
T Consensus       213 ~~~~~GVQwHPE~~~~~~~~~~~lf~~fv~~~~~~~~~~  251 (254)
T PRK11366        213 HPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEK  251 (254)
T ss_pred             CCCEEEEEeCCCcCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            56899999999988753322 345888999998877543

>COG2071 Predicted glutamine amidotransferases [General function prediction only]

Probab=97.56  E-value=2.6e-05  Score=67.87  Aligned_cols=35  Identities=26%  Similarity=0.393  Sum_probs=22.0

Q ss_pred             cCCCceeEEEcCC---CCCCCCCCcEEEeccCCccccc
Q 040100            4 APDGLIEGFYDPE---AYNPREGKFLVGLQFHSERMRL   38 (177)
Q Consensus         4 A~DGvIEAIE~~d---~ynP~e~~FilGVQWHPE~M~~   38 (177)
                      ++|=+|+|.-.++   +..-..+.|++|||||||++..
T Consensus       185 a~~L~V~A~a~DG~VEAie~~~~~fvlGVQWHPE~~~~  222 (243)
T COG2071         185 APGLVVEARAPDGTVEAVEVKNDAFVLGVQWHPEYLVD  222 (243)
T ss_pred             CCCcEEEEECCCCcEEEEEecCCceEEEEecChhhhcc
Confidence            3455666764322   1111224799999999998876

>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional

Probab=97.47  E-value=7.5e-05  Score=69.08  Aligned_cols=29  Identities=38%  Similarity=0.574  Sum_probs=24.4

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      +|+++||.|+||+..+      .+ ++|||||||..
T Consensus       145 lA~s~d~~i~a~~~~~------~p-i~GvQFHPE~~  173 (534)
T PRK14607        145 TAKSDDGEIMGIRHKE------HP-IFGVQFHPESI  173 (534)
T ss_pred             EEEcCCCCEEEEEECC------CC-EEEEEeCCCCC
Confidence            3678999999999886      44 78999999964

>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade

Probab=97.40  E-value=7.1e-05  Score=72.30  Aligned_cols=48  Identities=8%  Similarity=-0.007  Sum_probs=34.9

Q ss_pred             CCceeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHh
Q 040100            6 DGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus         6 DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~   60 (177)
                      +|+||||++.+      .+ ++|||||||.........--|.-|.++|..|+++.
T Consensus       164 ~~~i~ai~h~~------~p-i~GVQFHPE~~~s~~g~~~Lf~nFl~~~~~~~~~~  211 (742)
T TIGR01823       164 GIILMSAQTKK------KP-WFGVQYHPESCCSELGSGKLVSNFLKLAFINNVKT  211 (742)
T ss_pred             CCeEEEEEEcC------Cc-eEEEEeCcccCCCCccHHHHHHHHHHHHHHhhhhc
Confidence            46999999987      44 56999999975543211233778888999988644

This model represents the fungal clade of a para-aminobenzoate synthesis enzyme, aminodeoxychorismate synthase, which acts on chorismate in a pathway that yields PABA, a precursor of folate.

>PRK09065 glutamine amidotransferase; Provisional

Probab=97.30  E-value=0.00016  Score=60.16  Aligned_cols=27  Identities=26%  Similarity=0.249  Sum_probs=22.4

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      |.++++.|+||+..+        +++|||||||+.
T Consensus       163 a~s~~~~iqa~~~~~--------~i~gvQfHPE~~  189 (237)
T PRK09065        163 ARSAQDPHQAFRYGP--------HAWGVQFHPEFT  189 (237)
T ss_pred             EcCCCCCeeEEEeCC--------CEEEEEeCCcCC
Confidence            667889999998754        589999999953

>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]

Probab=97.07  E-value=0.00032  Score=66.74  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=33.0

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHH
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKR   59 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk   59 (177)
                      ++|++|+|||||+........--|-||.+|+..|++.
T Consensus       496 hpfFv~~QfHPEf~SrP~~phPlf~~fv~Aa~~~~~~  532 (533)
T COG0504         496 HPFFVATQFHPEFKSRPLRPHPLFVGFVKAALEYKKD  532 (533)
T ss_pred             CceEEEEcccccccCCCCCCCccHHHHHHHHHHhhcc
Confidence            7899999999999887777778899999999999864

>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional

Probab=97.03  E-value=0.00043  Score=64.70  Aligned_cols=27  Identities=22%  Similarity=0.416  Sum_probs=22.7

Q ss_pred             CCCceeEEEcCCCCCCCCCCcEEEeccCCccccc
Q 040100            5 PDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRL   38 (177)
Q Consensus         5 ~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~   38 (177)
                      .||.|+||++.+       ..++|||||||.+..
T Consensus       150 sd~~v~ai~~~~-------~~i~GVQFHPEs~~T  176 (531)
T PRK09522        150 FNGMVMAVRHDA-------DRVCGFQFHPESILT  176 (531)
T ss_pred             cCCCEEEEEECC-------CCEEEEEecCccccC
Confidence            699999999875       458899999997654

>PRK07567 glutamine amidotransferase; Provisional

Probab=97.00  E-value=0.00047  Score=57.76  Aligned_cols=28  Identities=29%  Similarity=0.250  Sum_probs=22.8

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |.++++.|+||+..+        .++|||||||+..
T Consensus       167 A~s~~~~vqa~~~~~--------~~~gvQfHPE~~~  194 (242)
T PRK07567        167 ATSPTCPVQMFRVGE--------NVYATQFHPELDA  194 (242)
T ss_pred             EeCCCCCEEEEEeCC--------CEEEEEeCCcCCH
Confidence            667889999999654        4899999999643

>PLN02347 GMP synthetase

Probab=96.96  E-value=0.00049  Score=64.53  Aligned_cols=30  Identities=27%  Similarity=0.432  Sum_probs=24.7

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++||.|+||+..+       ..++|||||||...
T Consensus       158 lA~s~~~~iaai~~~~-------~~i~GvQFHPE~~~  187 (536)
T PLN02347        158 VAKSVQGAVVAIENRE-------RRIYGLQYHPEVTH  187 (536)
T ss_pred             EEEeCCCcEEEEEECC-------CCEEEEEccCCCCc
Confidence            3678899999999876       34799999999754

>PRK00074 guaA GMP synthase; Reviewed

Probab=96.95  E-value=0.00055  Score=63.24  Aligned_cols=30  Identities=27%  Similarity=0.350  Sum_probs=24.7

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|.++|+.|+||+..+      + -++|||||||...
T Consensus       145 lA~s~~~~v~ai~~~~------~-~i~GvQFHPE~~~  174 (511)
T PRK00074        145 IASTENCPIAAIANEE------R-KFYGVQFHPEVTH  174 (511)
T ss_pred             EEEeCCCCEEEEEeCC------C-CEEEEeCCCCcCC
Confidence            3678899999999765      3 4899999999764

>PLN02889 oxo-acid-lyase/anthranilate synthase

Probab=96.54  E-value=0.0011  Score=66.40  Aligned_cols=47  Identities=19%  Similarity=0.263  Sum_probs=35.9

Q ss_pred             CceeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHhh
Q 040100            7 GLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMN   61 (177)
Q Consensus         7 GvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~~   61 (177)
                      |+|=||.+..       ..++|||||||-+... ...--+..|..+|..|.++..
T Consensus       297 ~viMairH~~-------~P~~GVQfHPESi~t~-~G~~l~~nF~~~~~~~~~~~~  343 (918)
T PLN02889        297 KILMGIMHST-------RPHYGLQFHPESIATC-YGRQIFKNFREITQDYWLRLR  343 (918)
T ss_pred             CeeEEEEECC-------CceEEEEeCCccccCc-hhHHHHHHHHHHHHHHhhccC
Confidence            7999999987       3578999999987652 233447788889999976543

>PRK06490 glutamine amidotransferase; Provisional

Probab=96.53  E-value=0.0017  Score=54.37  Aligned_cols=27  Identities=33%  Similarity=0.260  Sum_probs=22.6

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      |.++++.|+||...+        .++|+|||||+.
T Consensus       156 A~s~~~~~qa~~~~~--------~v~g~QfHPE~~  182 (239)
T PRK06490        156 ATGDDFPNQAFRYGD--------NAWGLQFHPEVT  182 (239)
T ss_pred             EeCCCCCeEEEEeCC--------CEEEEeeCccCC
Confidence            667899999998754        389999999975

>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]

Probab=96.43  E-value=0.0022  Score=61.24  Aligned_cols=48  Identities=23%  Similarity=0.180  Sum_probs=38.4

Q ss_pred             cccCCC-ceeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHH
Q 040100            2 AFAPDG-LIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIA   55 (177)
Q Consensus         2 A~A~DG-vIEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~a   55 (177)
                      +.+.|| -+|-||-++      +||.+|+|||||++.........|-|+..|...
T Consensus       501 Gkd~~g~rmeI~El~~------HP~fVg~QfHPE~~srp~kpsp~flGlv~as~~  549 (585)
T KOG2387|consen  501 GKDVTGKRMEIIELES------HPFFVGVQFHPEFKSRPDKPSPLFLGLVAASCG  549 (585)
T ss_pred             eecCCCcEEEEEEcCC------CCceeeeccCHHHhcCCCCCCcchhHhHHHHHh
Confidence            344454 478899888      899999999999998888888889888775443

>PLN02335 anthranilate synthase

Probab=96.34  E-value=0.00092  Score=55.35  Aligned_cols=36  Identities=17%  Similarity=0.169  Sum_probs=23.3

Q ss_pred             CcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHh
Q 040100           24 KFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus        24 ~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~   60 (177)
                      ++++|||||||.... ....--|.-|...|.++..|+
T Consensus       185 ~~i~GvQfHPE~~~~-~~g~~i~~nF~~~~~~~~~~~  220 (222)
T PLN02335        185 KHIQGVQFHPESIIT-TEGKTIVRNFIKIIEKKESEK  220 (222)
T ss_pred             CCEEEEEeCCCCCCC-hhHHHHHHHHHHHHHhhcccc
Confidence            479999999997643 222233666666776665554

>PRK05665 amidotransferase; Provisional

Probab=95.83  E-value=0.0068  Score=51.08  Aligned_cols=29  Identities=14%  Similarity=-0.039  Sum_probs=22.5

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCccccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRL   38 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~   38 (177)
                      |.+++.-++|++..+        .++|+|||||+...
T Consensus       163 a~s~~~~~q~~~~~~--------~~~g~QfHPE~~~~  191 (240)
T PRK05665        163 ASSDFCPFAAYHIGD--------QVLCFQGHPEFVHD  191 (240)
T ss_pred             EeCCCCcEEEEEeCC--------CEEEEecCCcCcHH
Confidence            567788889997543        59999999997543

>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase

Probab=95.83  E-value=0.014  Score=49.99  Aligned_cols=24  Identities=25%  Similarity=0.351  Sum_probs=18.2

Q ss_pred             Cc--eeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            7 GL--IEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         7 Gv--IEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |+  |.+|+..+      . .+.|||||||.-.
T Consensus       191 g~~fis~ie~~~------~-pi~gvQFHPEks~  216 (273)
T cd01747         191 GVEFISTVEAYK------Y-PIYGVQWHPEKNA  216 (273)
T ss_pred             CceEEEEEEecC------C-ceEEEecCCCccc
Confidence            64  78888765      2 4899999999543

Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.

>PLN02617 imidazole glycerol phosphate synthase hisHF

Probab=95.48  E-value=0.01  Score=56.01  Aligned_cols=23  Identities=22%  Similarity=0.330  Sum_probs=18.2

Q ss_pred             CCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            6 DGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         6 DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |++|+||+. +        .++|||||||...
T Consensus       174 ~~~IaAI~~-g--------nI~GVQFHPE~s~  196 (538)
T PLN02617        174 GEFIASVRK-G--------NVHAVQFHPEKSG  196 (538)
T ss_pred             CCcEEEEEe-C--------CEEEEEcCCccCc
Confidence            578999973 2        5999999999753

>PRK08250 glutamine amidotransferase; Provisional

Probab=95.35  E-value=0.012  Score=48.98  Aligned_cols=28  Identities=18%  Similarity=0.049  Sum_probs=20.7

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |.+++.-++|+...+        .++|||||||+..
T Consensus       157 A~s~~~~~qa~~~~~--------~~~g~QfHPE~~~  184 (235)
T PRK08250        157 ATSEGCPRQIVQYSN--------LVYGFQCHMEFTV  184 (235)
T ss_pred             ECCCCCCceEEEeCC--------CEEEEeecCcCCH
Confidence            456667788887543        4999999999644

>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional

Probab=94.83  E-value=0.0078  Score=54.76  Aligned_cols=30  Identities=10%  Similarity=0.093  Sum_probs=18.3

Q ss_pred             cEEEeccCCcccccCCCCCCCCCChHHHHH
Q 040100           25 FLVGLQFHSERMRLSSSEEFDYPGCPIAVI   54 (177)
Q Consensus        25 FilGVQWHPE~M~~~~~~~fDy~g~~~Av~   54 (177)
                      .++|||||||......+...-|.-|...|+
T Consensus       346 pi~gVQFHPE~~~gp~d~~~lf~~Fv~~~~  375 (382)
T CHL00197        346 PYFSVQYHPEASPGPHDADYLFEYFIEIIK  375 (382)
T ss_pred             CcEEEeeCCCCCCCCCCHHHHHHHHHHHHH
Confidence            589999999986543322223444555554

>PRK07053 glutamine amidotransferase; Provisional

Probab=93.02  E-value=0.076  Score=44.50  Aligned_cols=28  Identities=29%  Similarity=0.334  Sum_probs=19.6

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |.+++.-++||...        +-++|+|||||+..
T Consensus       155 a~s~~~~~qaf~~g--------~~~~g~QfHpE~~~  182 (234)
T PRK07053        155 ASTPACRHQAFAWG--------NHVLALQFHPEARE  182 (234)
T ss_pred             EcCCCCCeeEEEeC--------CCEEEEeeCccCCH
Confidence            44556667777643        24899999999654

>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated

Probab=91.73  E-value=0.08  Score=43.05  Aligned_cols=12  Identities=42%  Similarity=0.822  Sum_probs=10.3

Q ss_pred             EEEeccCCcccc
Q 040100           26 LVGLQFHSERMR   37 (177)
Q Consensus        26 ilGVQWHPE~M~   37 (177)
                      ++|||||||...
T Consensus       162 i~gvQFHPE~~~  173 (195)
T PRK07649        162 IEGVQFHPESIM  173 (195)
T ss_pred             EEEEEECCCCCC
Confidence            899999999654

>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only]

Probab=86.07  E-value=0.46  Score=49.58  Aligned_cols=75  Identities=19%  Similarity=0.230  Sum_probs=52.1

Q ss_pred             cCCCceeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHhhhcCCCCCCCcchhhhh-hccee
Q 040100            4 APDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMNRASYVPNFIPLKQKIG-KSKVL   82 (177)
Q Consensus         4 A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~~~~~~~~~~~~l~~~me-krk~i   82 (177)
                      ..||-=|+|.+..       ..++.||||||--.-..+.++-|.=|...++-++.....+..+..+.++..-.+ +++.+
T Consensus       310 ~NDgSNEGI~Hss-------~P~fSvQFHPEat~GP~DTeyLFDiFi~lvkk~kst~tAs~~~t~~~~~~~~~~~~kVlv  382 (1435)
T KOG0370|consen  310 ANDGSNEGIMHSS-------KPFFSVQFHPEATPGPHDTEYLFDVFIELVKKSKSTPTASAFITEPAKAAPRVEVKKVLV  382 (1435)
T ss_pred             cccCCCceEecCC-------CCceeeecCCcCCCCCcchHHHHHHHHHHHHHHhcCCcccccccccccccccccccEEEE
Confidence            4688999999876       346799999996555555566687777777777766665566655566666666 55555


Q ss_pred             eec
Q 040100           83 VKS   85 (177)
Q Consensus        83 vrs   85 (177)
                      +.|
T Consensus       383 lGS  385 (1435)
T KOG0370|consen  383 LGS  385 (1435)
T ss_pred             Ecc
Confidence            555

>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex

Probab=84.98  E-value=0.86  Score=39.56  Aligned_cols=22  Identities=23%  Similarity=0.243  Sum_probs=16.0

Q ss_pred             CceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            7 GLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         7 GvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      ++|-||...         -++|+|||||...
T Consensus       181 ~~~~aV~qg---------nvlatqFHPEls~  202 (248)
T PLN02832        181 KVIVAVKQG---------NLLATAFHPELTA  202 (248)
T ss_pred             ceEEEEEeC---------CEEEEEccCccCC
Confidence            567777633         3899999999643

>KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism]

Probab=81.58  E-value=0.79  Score=41.75  Aligned_cols=30  Identities=23%  Similarity=0.313  Sum_probs=17.2

Q ss_pred             cEEEeccCCcccccCCCCCCCCCChHHHHHH
Q 040100           25 FLVGLQFHSERMRLSSSEEFDYPGCPIAVIA   55 (177)
Q Consensus        25 FilGVQWHPE~M~~~~~~~fDy~g~~~Av~a   55 (177)
                      .+-|+|||||--.-. -..-|-|--.+|++-
T Consensus       260 PvtgfQWHPEKnafE-Wgss~IpHsedAiqv  289 (340)
T KOG1559|consen  260 PVTGFQWHPEKNAFE-WGSSDIPHSEDAIQV  289 (340)
T ss_pred             cceeeeecCccCccc-cccCCCCCChhHHHH
Confidence            489999999943211 112335555666543

>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade

Probab=81.52  E-value=0.66  Score=45.54  Aligned_cols=13  Identities=38%  Similarity=0.588  Sum_probs=10.6

Q ss_pred             cEEEeccCCcccc
Q 040100           25 FLVGLQFHSERMR   37 (177)
Q Consensus        25 FilGVQWHPE~M~   37 (177)
                      .++|||||||...
T Consensus       678 ~i~GVQFHPEsi~  690 (717)
T TIGR01815       678 PLAAVQFHPESIM  690 (717)
T ss_pred             CEEEEEeCCeeCC
Confidence            3789999999753

This model represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium). This enzyme is the first step in the pathway for the biosynthesis of tryprophan from chorismate.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
3fij_A	254	LIN1909 protein; 11172J, uncharacterized protein,	2e-06

>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 1   MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSE 42
            A   DG+IE              + +G+Q+H E M  +  E
Sbjct: 192 TARTADGMIEAVEGDNL-----PSWYLGVQWHPELMFQTDPE 228

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
3fij_A	254	LIN1909 protein; 11172J, uncharacterized protein,	98.83
2v4u_A	289	CTP synthase 2; pyrimidine biosynthesis, glutamine	98.75
2w7t_A	273	CTP synthetase, putative cytidine triphosphate syn	98.67
1l9x_A	315	Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO	98.03
1o1y_A	239	Conserved hypothetical protein TM1158; flavodoxin-	97.7
2ywb_A	503	GMP synthase [glutamine-hydrolyzing]; GMP syntheta	97.59
1gpm_A	525	GMP synthetase, XMP aminase; class I glutamine ami	97.55
3l7n_A	236	Putative uncharacterized protein; glutamine amidot	97.5
1s1m_A	545	CTP synthase; CTP synthetase, UTP:ammonia ligase (	97.48
3m3p_A	250	Glutamine amido transferase; structural genomics,	97.43
1vco_A	550	CTP synthetase; tetramer, riken structural genomic	97.23
3tqi_A	527	GMP synthase [glutamine-hydrolyzing]; ligase; 2.84	97.19
3uow_A	556	GMP synthetase; structural genomics consortium, SG	97.07
1jvn_A	555	Glutamine, bifunctional histidine biosynthesis pro	97.01
2vxo_A	697	GMP synthase [glutamine-hydrolyzing]; proto-oncoge	96.81
3d54_D	213	Phosphoribosylformylglycinamidine synthase 1; alph	96.51
1q7r_A	219	Predicted amidotransferase; structural genomics, Y	96.33
1a9x_B	379	Carbamoyl phosphate synthetase (small chain); amid	96.29
2a9v_A	212	GMP synthase; structural genomics, joint center fo	96.25
2abw_A	227	PDX2 protein, glutaminase; PLP-synthase, vitamin B	95.49
2vpi_A	218	GMP synthase; guanine monophosphate synthetase, ph	94.76
3r75_A	645	Anthranilate/para-aminobenzoate synthases compone;	87.75
2h2w_A	312	Homoserine O-succinyltransferase; TM0881, (EC 2.3.	82.34
2vdj_A	301	Homoserine O-succinyltransferase; methionine biosy	82.01

>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}

Probab=98.83  E-value=1.7e-10  Score=93.47  Aligned_cols=53  Identities=23%  Similarity=0.238  Sum_probs=38.8

Q ss_pred             CcccCCCceeEEEcC-CCCCCCCCCcEEEeccCCcccccCCCC-CCCCCChHHHHHHHHHH
Q 040100            1 MAFAPDGLIEGFYDP-EAYNPREGKFLVGLQFHSERMRLSSSE-EFDYPGCPIAVIAYQKR   59 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~-d~ynP~e~~FilGVQWHPE~M~~~~~~-~fDy~g~~~Av~ayqkk   59 (177)
                      +|+++||+||||+.+ +      ++|++|||||||++...+.. ..-|..|.++|..|..|
T Consensus       192 ~a~s~dg~ieai~~~~~------~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~~~~  246 (254)
T 3fij_A          192 TARTADGMIEAVEGDNL------PSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK  246 (254)
T ss_dssp             EEEETTCCEEEEEESSC------SSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSCC--
T ss_pred             EEEeCCCcEEEEEecCC------CCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHHHhh
Confidence            378899999999998 7      67999999999987643211 23367778887766544

>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A

Probab=98.75  E-value=1.5e-09  Score=90.43  Aligned_cols=54  Identities=22%  Similarity=0.225  Sum_probs=40.1

Q ss_pred             CcccCCCc-eeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHh
Q 040100            1 MAFAPDGL-IEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus         1 ~A~A~DGv-IEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~   60 (177)
                      +|+++||. ||||+.++      .+|++|||||||++........-|..|..+|+.+....
T Consensus       227 ~A~s~dg~~ieaie~~~------~p~~lGvQfHPE~~~~~~~~~~lf~~Fv~~~~~~~~~~  281 (289)
T 2v4u_A          227 VGQDVDGDRMEIIELAN------HPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAY  281 (289)
T ss_dssp             EEEETTSCSEEEEEESS------SSCEEEESSBGGGGCBTTBCCHHHHHHHHHHHTCHHHH
T ss_pred             EEEcCCCCeEEEEEcCC------CCeEEEEECCCCCCCCCCchHHHHHHHHHHHHhhhhhh
Confidence            47789997 99999987      68999999999998753322333677777776655543

>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}

Probab=98.67  E-value=3.5e-09  Score=87.36  Aligned_cols=50  Identities=20%  Similarity=0.248  Sum_probs=37.5

Q ss_pred             CcccCC----C-ceeEEEcCCCCCCCCCCcEEEeccCCcccccCCCCCCCCCChHHHHHHH
Q 040100            1 MAFAPD----G-LIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAY   56 (177)
Q Consensus         1 ~A~A~D----G-vIEAIE~~d~ynP~e~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ay   56 (177)
                      +|+++|    | +||||+..+      .+|++|||||||.+........-|..|..+|..+
T Consensus       203 ~A~s~d~~~~g~~ieaie~~~------~p~~~GvQfHPE~~~~~~~~~~l~~~Fv~~~~~~  257 (273)
T 2w7t_A          203 SAVTDPTFSSRCRVEAVENPS------LRFFLAVQFHPEFISTPMDPAPTYLSFMAAAAKK  257 (273)
T ss_dssp             EEESCTTCCTTCCEEEEECTT------SSSEEEESSCGGGSCBTTBCCHHHHHHHHHHHTC
T ss_pred             EEEcCCcCCCCCeEEEEEcCC------CCeEEEEeCCCCcCCCCCchHHHHHHHHHHHHHH
Confidence            378888    7 999999887      6899999999998765332233466777777554

>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1

Probab=98.03  E-value=1.3e-06  Score=73.52  Aligned_cols=33  Identities=27%  Similarity=0.301  Sum_probs=23.9

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++||+||||+...  .+  +.+++|||||||...
T Consensus       214 ~A~s~dg~ve~i~~i~--~~--~~~i~GVQfHPE~~~  246 (315)
T 1l9x_A          214 LTTNTDGKIEFISTME--GY--KYPVYGVQWHPEKAP  246 (315)
T ss_dssp             EEEEESSSCEEEEEEE--ES--SSCEEEESSCTTHHH
T ss_pred             EEEcCCCCEEEEEEec--cC--CCCEEEEEeCCCCCc
Confidence            3788999999886432  01  136899999999854

>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1

Probab=97.70  E-value=1.2e-05  Score=64.69  Aligned_cols=27  Identities=37%  Similarity=0.327  Sum_probs=22.7

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      +|+++||.||||+..        . ++|||||||..
T Consensus       163 lA~s~~~~iea~~~~--------~-i~gvQfHPE~~  189 (239)
T 1o1y_A          163 VFTSEKYENQGFVYG--------K-AVGLQFHIEVG  189 (239)
T ss_dssp             EEECSSCSCSEEEET--------T-EEEESSBSSCC
T ss_pred             EEEcCCCCEEEEEEC--------C-EEEEEeCccCC
Confidence            367899999999963        3 89999999974

>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*

Probab=97.59  E-value=2.4e-05  Score=69.58  Aligned_cols=30  Identities=23%  Similarity=0.375  Sum_probs=25.4

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++||.|+||+.++       .+++|||||||...
T Consensus       140 ~A~s~~~~i~ai~~~~-------~~~~gvQFHPE~~~  169 (503)
T 2ywb_A          140 VAETEENPVAAIASPD-------GRAYGVQFHPEVAH  169 (503)
T ss_dssp             EEECSSCSCSEEECTT-------SSEEEESBCTTSTT
T ss_pred             EEEECCCCEEEEEeCC-------CCEEEEecCCCccc
Confidence            3778999999999875       36899999999764

>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1

Probab=97.55  E-value=2.8e-05  Score=69.62  Aligned_cols=30  Identities=27%  Similarity=0.287  Sum_probs=25.5

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++||.|+||+.++       .+++|||||||...
T Consensus       157 ~A~s~~~~i~ai~~~~-------~~i~gvQFHPE~~~  186 (525)
T 1gpm_A          157 VASTESCPFAIMANEE-------KRFYGVQFHPEVTH  186 (525)
T ss_dssp             EEECSSCSCSEEEETT-------TTEEEESBCTTSTT
T ss_pred             EEECCCCCEEEEEECC-------CCEEEEecCCCCCc
Confidence            3778999999999876       36899999999765

>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}

Probab=97.50  E-value=2.9e-05  Score=61.85  Aligned_cols=28  Identities=14%  Similarity=-0.091  Sum_probs=23.3

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      +|+++||.++||+..+        +++|||||||+.
T Consensus       156 la~s~~~~~~a~~~~~--------~v~gvQfHPE~~  183 (236)
T 3l7n_A          156 LAISQGCPRQIIKFGP--------KQYAFQCHLEFT  183 (236)
T ss_dssp             EEECSSCSCSEEEEET--------TEEEESSBSSCC
T ss_pred             EEECCCCCEEEEEECC--------CEEEEEeCCCCC
Confidence            3678899999998653        699999999974

>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*

Probab=97.48  E-value=2.5e-05  Score=71.90  Aligned_cols=38  Identities=26%  Similarity=0.314  Sum_probs=29.7

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHh
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~   60 (177)
                      ++|++|||||||+.........-|.+|..||..|+++.
T Consensus       506 ~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~~~~  543 (545)
T 1s1m_A          506 HPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQ  543 (545)
T ss_dssp             SSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHhhh
Confidence            57899999999987764433455889999999988653

>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*

Probab=97.43  E-value=4.9e-05  Score=62.54  Aligned_cols=28  Identities=14%  Similarity=0.194  Sum_probs=23.6

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      +|.++||.|+||+..+        .++|||||||..
T Consensus       153 lA~s~~~~~~a~~~~~--------~~~GvQfHPE~~  180 (250)
T 3m3p_A          153 ILRSEHCANQAYVLDD--------LHIGFQCHIEMQ  180 (250)
T ss_dssp             EEEETTEEEEEEEETT--------TEEEESSCTTCC
T ss_pred             EEEeCCCCEEEEEECC--------eeEEEEeCCcCC
Confidence            3778999999999765        289999999964

>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A

Probab=97.23  E-value=4.7e-05  Score=70.22  Aligned_cols=37  Identities=32%  Similarity=0.407  Sum_probs=27.7

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHH
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKR   59 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk   59 (177)
                      ++|++|||||||..........-|.+|..|+..|++|
T Consensus       513 ~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~~~  549 (550)
T 1vco_A          513 HPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAYQER  549 (550)
T ss_dssp             SSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHHTC-
T ss_pred             CCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhhccc
Confidence            4788899999998776443344588899999887654

>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}

Probab=97.19  E-value=0.00016  Score=64.90  Aligned_cols=30  Identities=27%  Similarity=0.424  Sum_probs=24.6

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      +|+++|+.|+||++.+      ++ ++|||||||...
T Consensus       160 ~A~s~~~~i~ai~~~~------~~-~~GvQFHPE~~~  189 (527)
T 3tqi_A          160 TACTDNSPLAAMADFK------RR-FFGLQFHPEVTH  189 (527)
T ss_dssp             EEEETTEEEEEEECSS------SC-EEEESBCSSSTT
T ss_pred             EEEeCCCcEEEEEcCC------CC-EEEEEecccccc
Confidence            3678899999999876      44 689999999764

>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}

Probab=97.07  E-value=0.00023  Score=64.57  Aligned_cols=31  Identities=26%  Similarity=0.441  Sum_probs=25.3

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRL   38 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~~   38 (177)
                      +|.++||.|+||+.++      ++ ++|||||||....
T Consensus       185 lA~s~~~~i~ai~~~~------~~-i~GvQFHPE~~~~  215 (556)
T 3uow_A          185 VSSSENCLICSIYNKE------YN-IYGVQYHPEVYES  215 (556)
T ss_dssp             EEEETTEEEEEEEETT------TT-EEEESSCTTSTTS
T ss_pred             EEEeCCCCEEEEEECC------CC-EEEEEcCCCCCcc
Confidence            3678999999999876      44 6899999997643

>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A

Probab=97.01  E-value=0.00012  Score=66.19  Aligned_cols=26  Identities=27%  Similarity=0.378  Sum_probs=20.4

Q ss_pred             cccC---CCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            2 AFAP---DGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         2 A~A~---DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      |+++   ||+|+||+. +        +++|||||||..
T Consensus       172 A~s~~~~D~~i~ai~~-~--------~i~GvQFHPE~s  200 (555)
T 1jvn_A          172 AKAKYGSEEFIAAVNK-N--------NIFATQFHPEKS  200 (555)
T ss_dssp             EEEEETTEEEEEEEEE-T--------TEEEESSBGGGS
T ss_pred             EEEcCCCCCeEEEEEe-C--------CEEEEEeCcEec
Confidence            4455   689999992 2        599999999964

>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}

Probab=96.81  E-value=0.00055  Score=64.17  Aligned_cols=28  Identities=32%  Similarity=0.408  Sum_probs=22.6

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |++ ||.|+||++++       ..++|||||||...
T Consensus       172 A~s-~~~i~ai~~~~-------~~i~GvQFHPE~~~  199 (697)
T 2vxo_A          172 ARS-GNIVAGIANES-------KKLYGAQFHPEVGL  199 (697)
T ss_dssp             EEE-TTEEEEEEETT-------TTEEEESSCTTSSS
T ss_pred             EEe-CCceEEEEeCC-------CCEEEEEecccCCC
Confidence            555 56999999876       45899999999764

>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}

Probab=96.51  E-value=0.00086  Score=51.08  Aligned_cols=16  Identities=31%  Similarity=0.275  Sum_probs=13.2

Q ss_pred             CCcEEEeccCCccccc
Q 040100           23 GKFLVGLQFHSERMRL   38 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~   38 (177)
                      +.+++|||||||.+..
T Consensus       177 ~~~~~gvQfHPE~~~~  192 (213)
T 3d54_D          177 SGNVFGLMPHPERAVE  192 (213)
T ss_dssp             SSCEEEECSCSTTTTS
T ss_pred             CCCEEEEeCCHHHhcC
Confidence            4579999999997654

>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1

Probab=96.33  E-value=0.00083  Score=52.70  Aligned_cols=30  Identities=17%  Similarity=-0.019  Sum_probs=20.2

Q ss_pred             CcEEEeccCCcccccCCCCCCCCCChHHHHHHHH
Q 040100           24 KFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQ   57 (177)
Q Consensus        24 ~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayq   57 (177)
                      ++++|||||||++..    ..-+..|..+|..|+
T Consensus       184 ~~i~GvQfHPE~~~~----~~l~~~fl~~~~~~~  213 (219)
T 1q7r_A          184 GQFLGCSFHPELTDD----HRLMQYFLNMVKEAK  213 (219)
T ss_dssp             TTEEEESSCGGGSSC----CHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECcccCCC----HHHHHHHHHHHHHhh
Confidence            468999999997531    222455667777664

>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*

Probab=96.29  E-value=0.0011  Score=58.20  Aligned_cols=35  Identities=14%  Similarity=-0.022  Sum_probs=24.4

Q ss_pred             CcEEEeccCCcccccCCCCCCCCCChHHHHHHHHH
Q 040100           24 KFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQK   58 (177)
Q Consensus        24 ~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqk   58 (177)
                      ..++|||||||..........-|..|..+|..|+.
T Consensus       344 ~pi~gVQFHPE~~~~p~d~~~Lf~~Fl~~~~~~~~  378 (379)
T 1a9x_B          344 KPAFSFQGNPEASPGPHDAAPLFDHFIELIEQYRK  378 (379)
T ss_dssp             SSEEEESSCTTCSSSCSTTTHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCcCCCCcccHHHHHHHHHHHHHHhhc
Confidence            36899999999875432223447788888877653

>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1

Probab=96.25  E-value=0.00076  Score=53.08  Aligned_cols=34  Identities=15%  Similarity=0.111  Sum_probs=21.6

Q ss_pred             CcEEEeccCCcccccCCCCCCCCCChHHHHHHHHH
Q 040100           24 KFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQK   58 (177)
Q Consensus        24 ~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqk   58 (177)
                      .+++|||||||...... ...-+..|.++|+.|+.
T Consensus       171 ~~i~gvQfHPE~~~~~~-g~~l~~~F~~~~~~~~~  204 (212)
T 2a9v_A          171 RPIYATQFHPEVEHTQY-GRDIFRNFIGICASYRE  204 (212)
T ss_dssp             SSEEEESSCTTSTTSTT-HHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCCcc-HHHHHHHHHHHHHHhhh
Confidence            46999999999864211 12235666777766643

>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G

Probab=95.49  E-value=0.0032  Score=49.25  Aligned_cols=31  Identities=19%  Similarity=0.056  Sum_probs=18.9

Q ss_pred             CcEEEeccCCcccccCCCCCCCCCChHHHHHHHHH
Q 040100           24 KFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQK   58 (177)
Q Consensus        24 ~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqk   58 (177)
                      .+++|+|||||++..    .--+..|..+|+.+.+
T Consensus       188 ~~v~gvQfHPE~~~~----~~l~~~Fl~~~~~~~~  218 (227)
T 2abw_A          188 NNCLGTVFHPELLPH----TAFQQYFYEKVKNYKY  218 (227)
T ss_dssp             TTEEEESSCGGGSSC----CHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCeeCCC----cHHHHHHHHHHHhhhc
Confidence            368999999997632    1223445566654443

>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}

Probab=94.76  E-value=0.011  Score=47.08  Aligned_cols=14  Identities=50%  Similarity=0.482  Sum_probs=11.6

Q ss_pred             CcEEEeccCCcccc
Q 040100           24 KFLVGLQFHSERMR   37 (177)
Q Consensus        24 ~FilGVQWHPE~M~   37 (177)
                      .+++|||||||...
T Consensus       181 ~~i~gvQfHPE~~~  194 (218)
T 2vpi_A          181 KKLYGAQFHPEVGL  194 (218)
T ss_dssp             TTEEEESSCTTSTT
T ss_pred             CCEEEEEcCCCCCC
Confidence            46899999999754

>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*

Probab=87.75  E-value=0.18  Score=46.88  Aligned_cols=13  Identities=31%  Similarity=0.554  Sum_probs=10.5

Q ss_pred             cEEEeccCCcccc
Q 040100           25 FLVGLQFHSERMR   37 (177)
Q Consensus        25 FilGVQWHPE~M~   37 (177)
                      .++|||||||...
T Consensus       606 ~~~GVQFHPE~~~  618 (645)
T 3r75_A          606 TFSSMQFHAESVL  618 (645)
T ss_dssp             TEEEESSBTTSTT
T ss_pred             CEEEEEeCCeecC
Confidence            3589999999654

>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}

Probab=82.34  E-value=0.87  Score=39.18  Aligned_cols=29  Identities=14%  Similarity=-0.074  Sum_probs=20.9

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |.++.-=+.+|..++      + -++|||+|||+-.
T Consensus       223 A~S~~~~~q~~~~~~------~-~~~~vQgHPEyd~  251 (312)
T 2h2w_A          223 AESDEAGVYVVANKS------E-RQIFVTGHPEYDR  251 (312)
T ss_dssp             EEETTTEEEEEECSS------S-SEEEECSCTTCCT
T ss_pred             EcCCCCcceEEEecC------C-CEEEEECCCCCCH
Confidence            445555677887755      3 4899999999644

>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A

Probab=82.01  E-value=0.7  Score=39.38  Aligned_cols=29  Identities=24%  Similarity=-0.008  Sum_probs=20.7

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcccc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMR   37 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M~   37 (177)
                      |.+++-=+.+|...+      + -++|||+|||+-.
T Consensus       212 A~S~~~~~~~~~~~~------~-~~~~vQgHpEyd~  240 (301)
T 2vdj_A          212 ANSEEAGVHLVIGQE------G-RQVFALGHSEYSC  240 (301)
T ss_dssp             EEETTTEEEEEEEGG------G-TEEEECSCTTCCT
T ss_pred             EeCCCCcceEEEecC------C-CEEEEECCCCCCH
Confidence            445555677887755      3 4899999999644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1s1ma1	258	CTP synthase PyrG, C-terminal domain {Escherichia	98.24
d1l9xa_	288	gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta	98.03
d2a9va1	196	GMP synthase subunit A, GuaAA {Archaeon Thermoplas	96.06
d1a9xb2	228	Carbamoyl phosphate synthetase, small subunit C-te	95.83
d1o1ya_	230	Hypothetical protein TM1158 {Thermotoga maritima [	95.63
d1jvna2	232	GAT subunit, HisH, (or domain) of imidazoleglycero	95.47
d1q7ra_	202	Hypothetical protein YaaE {Bacillus stearothermoph	92.77

>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: CTP synthase PyrG, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=1e-07  Score=79.31  Aligned_cols=39  Identities=26%  Similarity=0.303  Sum_probs=33.4

Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHhh
Q 040100           23 GKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRMN   61 (177)
Q Consensus        23 ~~FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~~   61 (177)
                      ++|.+|||||||+........-.|-+|..|+..|++++.
T Consensus       220 HPffvg~QfHPEf~Srp~~p~PLF~~Fi~Aa~~~~k~~~  258 (258)
T d1s1ma1         220 HPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQA  258 (258)
T ss_dssp             SSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHHHHHCC
T ss_pred             CCeEEEecCCccccCCCCCCChHHHHHHHHHHHHHHhcC
Confidence            589999999999987666555679999999999999863

>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.4e-07  Score=70.87  Aligned_cols=32  Identities=28%  Similarity=0.325  Sum_probs=22.6

Q ss_pred             CcccCCCceeEEEcCCCCCCCCCCcEEEeccCCccc
Q 040100            1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERM   36 (177)
Q Consensus         1 ~A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~M   36 (177)
                      +|+++||.||+|+....    ...+++|||||||.-
T Consensus       187 ~a~s~d~~~e~I~~ie~----~~~pi~GvQfHPEk~  218 (288)
T d1l9xa_         187 LTTNTDGKIEFISTMEG----YKYPVYGVQWHPEKA  218 (288)
T ss_dssp             EEEEESSSCEEEEEEEE----SSSCEEEESSCTTHH
T ss_pred             EEEECCCCeEEEEEEEc----CCCcEEEEEcCCCCC
Confidence            36789999888865320    012578999999964

>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: GMP synthase subunit A, GuaAA
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.06  E-value=0.0005  Score=51.25  Aligned_cols=35  Identities=14%  Similarity=0.050  Sum_probs=22.9

Q ss_pred             cEEEeccCCcccccCCCCCCCCCChHHHHHHHHHHh
Q 040100           25 FLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM   60 (177)
Q Consensus        25 FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk~   60 (177)
                      -++|||||||.... ....--+..|...|..|+++.
T Consensus       160 ~i~gvQfHPE~~~s-~~G~~il~~F~~~~~~~~~~~  194 (196)
T d2a9va1         160 PIYATQFHPEVEHT-QYGRDIFRNFIGICASYREIQ  194 (196)
T ss_dssp             SEEEESSCTTSTTS-TTHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCcccCCC-ccHHHHHHHHHHHHHHHHHhc
Confidence            36899999995321 111122567888999997764

>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: Carbamoyl phosphate synthetase, small subunit C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.0012  Score=51.68  Aligned_cols=34  Identities=12%  Similarity=-0.054  Sum_probs=23.2

Q ss_pred             cEEEeccCCcccccCCCCCCCCCChHHHHHHHHH
Q 040100           25 FLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQK   58 (177)
Q Consensus        25 FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqk   58 (177)
                      .+.|||||||-.........-|.-|...|..|+|
T Consensus       194 ~i~gVQFHPE~~~t~~dg~~l~~nFl~~i~~~kk  227 (228)
T d1a9xb2         194 PAFSFQGNPEASPGPHDAAPLFDHFIELIEQYRK  227 (228)
T ss_dssp             SEEEESSCTTCSSSCSTTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCCCCCcccHHHHHHHHHHHHHHHhC
Confidence            4889999999655333233346667778877765

>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: Hypothetical protein TM1158
species: Thermotoga maritima [TaxId: 2336]

Probab=95.63  E-value=0.0021  Score=49.65  Aligned_cols=25  Identities=40%  Similarity=0.379  Sum_probs=18.8

Q ss_pred             cccCCCceeEEEcCCCCCCCCCCcEEEeccCCcc
Q 040100            2 AFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSER   35 (177)
Q Consensus         2 A~A~DGvIEAIE~~d~ynP~e~~FilGVQWHPE~   35 (177)
                      |.++++-|+||...        + ++|+|||||.
T Consensus       155 a~s~~~~~qa~~~~--------~-~~g~QfHPE~  179 (230)
T d1o1ya_         155 FTSEKYENQGFVYG--------K-AVGLQFHIEV  179 (230)
T ss_dssp             EECSSCSCSEEEET--------T-EEEESSBSSC
T ss_pred             hhhcCCceEEEEec--------C-EeEEEeCCCC
Confidence            45677778888642        2 6899999995

>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: Hypothetical protein YaaE
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.77  E-value=0.014  Score=43.36  Aligned_cols=31  Identities=16%  Similarity=0.053  Sum_probs=19.0

Q ss_pred             cEEEeccCCcccccCCCCCCCCCChHHHHHHHHHH
Q 040100           25 FLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKR   59 (177)
Q Consensus        25 FilGVQWHPE~M~~~~~~~fDy~g~~~Av~ayqkk   59 (177)
                      -++|+|||||..   + +.--+..|...|+..+..
T Consensus       168 ni~G~QFHPEkS---~-~~~il~~Fl~~~~~~k~~  198 (202)
T d1q7ra_         168 QFLGCSFHPELT---D-DHRLMQYFLNMVKEAKMA  198 (202)
T ss_dssp             TEEEESSCGGGS---S-CCHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCccC---C-ChHHHHHHHHHHHHhhhh
Confidence            488999999952   1 111245566677655443