Citrus Sinensis ID: 040233

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MGGNMSKKTSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTNN
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mggnmskktsetsSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFeeendmgagHRYVRTLEELKnfkaagdpftEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAAssiplgsmgkWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVedlgvqadtcsrDIRRARTVVLQRIIKHTNN
Flexible Loop (DISEMBL)
mggnmskktsetssqFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQqfeeendmGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMknvedlgvqadtcsrdirrARTVVLQRIIKHTNN
Low Complexity Region (SEG)
MGGNMSKKTSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICsvvaaamaappvaaalaaassipLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTNN
Disordered region (IsUnstruct)
**********************YEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRII*****
Disordered Region (DISOPRED)
*************************ACRLDTDLQTFDTSLQA*********************SLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQF*************RTLEELKNFKAAGDP***************************************WRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEH***********MQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEI**********VEDLGVQADTCSRDIRRARTVVL**I******
Disordered Region (DISEMBL)
*******************LSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTNN
Disordered Region (DISPRO)
**************QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKH***
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGNMSKKTSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVxxxxxxxxxxxxxxxxxxxxxLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDxxxxxxxxxxxxxxxxxxxxxxxxxxxxEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTNN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q9SYZ7	374	UPF0496 protein At4g34320	yes	no	1.0	0.978	0.761	1e-152
Q10QE9	388	UPF0496 protein 1 OS=Oryz	yes	no	0.937	0.884	0.714	1e-132
A2XDK8	388	UPF0496 protein 1 OS=Oryz	N/A	no	0.937	0.884	0.714	1e-132
Q9SYZ8	354	UPF0496 protein At4g34330	no	no	0.956	0.988	0.610	1e-115
Q56XQ0	393	UPF0496 protein At2g18630	no	no	0.959	0.893	0.551	1e-108
Q8GW16	412	UPF0496 protein At5g66675	no	no	0.961	0.854	0.511	1e-99
Q7XFE1	423	Putative UPF0496 protein	no	no	0.879	0.761	0.590	8e-96
A2Z6C5	428	Putative UPF0496 protein	N/A	no	0.879	0.752	0.581	1e-92
Q9LVR3	408	UPF0496 protein At5g66670	no	no	0.983	0.882	0.419	8e-76
Q9LVR4	398	UPF0496 protein At5g66660	no	no	0.961	0.884	0.411	9e-72

>sp|Q9SYZ7|U496A_ARATH UPF0496 protein At4g34320 OS=Arabidopsis thaliana GN=At4g34320 PE=1 SV=1

 Score =  539 bits (1388), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/369 (76%), Positives = 329/369 (89%), Gaps = 3/369 (0%)

Query: 1   MGGNMSKKTSETSSQ---FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEV 57
           MG   SKK+ ETS++   +TTEL SY AAC+ DT+LQ+FDT LQARTSHVI+TLA GVEV
Sbjct: 1   MGNQTSKKSQETSAKSVHYTTELRSYAAACKADTELQSFDTCLQARTSHVISTLATGVEV 60

Query: 58  RALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTAL 117
           RALSFDSLKEVT+CLLEMNQEVVKVIL+CKKDIWK+QE+FELVE+YFE+SL+TLDFC AL
Sbjct: 61  RALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAAL 120

Query: 118 EKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQS 177
           EK L+RARDS LLILVALQQFE+E+ +  G+ Y +TLEELKNFK A  PF E+FF++FQS
Sbjct: 121 EKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEELKNFKDAESPFNEDFFKMFQS 180

Query: 178 VYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVA 237
           VYKQQ+ MLEKLQ RKNKLDKKLK IH+WRK+SSIIF ATFATVLICSVVAAAMAAPPVA
Sbjct: 181 VYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVVAAAMAAPPVA 240

Query: 238 AALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRL 297
           AALAAA+++PLGSMGKWIDSLWKNYE+ALKGQKE+ISSMQ GT++A+KDLDNIRVLI+RL
Sbjct: 241 AALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIERL 300

Query: 298 EIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVL 357
           EIE+  ++++ +F +E  AVKIG+++IKKKL VF KNVE+LG QAD CSRDIRRARTV+L
Sbjct: 301 EIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCSRDIRRARTVIL 360

Query: 358 QRIIKHTNN 366
           QRIIKH NN
Sbjct: 361 QRIIKHPNN 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q10QE9|U496A_ORYSJ UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100 PE=2 SV=1

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/354 (71%), Positives = 303/354 (85%), Gaps = 11/354 (3%)

Query: 23  YEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKV 82
           YEAACR D +L+TFDT+LQ RTS  I+TLA GVEVR+LS +SL+EVT CLL+MNQEVV+V
Sbjct: 35  YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94

Query: 83  ILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEEN 142
           IL+CKKDIWKS ELF+LVE+YFESSL TLDFCTAL+KCLKRARDSQLL+ VALQ+F++E 
Sbjct: 95  ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154

Query: 143 D----------MGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLR 192
           D               RY RTL EL+ FKAAGDPFTEEFF  FQ+VY+QQ++MLEKLQ R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214

Query: 193 KNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMG 252
           K++LDKK++ I +WR+VSSIIFA TFA VLICSVVAAA+AAPPVAAALAAA+SIP+GSMG
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274

Query: 253 KWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV- 311
           KWIDSL K Y+ AL+GQKE++S+MQVGT+IAIKDLD+IRVLI+R+E+E+ +++  V+F  
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334

Query: 312 IEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTN 365
            +EEAVK GVEEIKKKL VFMK+VEDLG QAD CSRDIRRARTVVLQRII+H +
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XDK8|U496A_ORYSI UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2 SV=1

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/354 (71%), Positives = 303/354 (85%), Gaps = 11/354 (3%)

Query: 23  YEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKV 82
           YEAACR D +L+TFDT+LQ RTS  I+TLA GVEVR+LS +SL+EVT CLL+MNQEVV+V
Sbjct: 35  YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94

Query: 83  ILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEEN 142
           IL+CKKDIWKS ELF+LVE+YFESSL TLDFCTAL+KCLKRARDSQLL+ VALQ+F++E 
Sbjct: 95  ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154

Query: 143 D----------MGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLR 192
           D               RY RTL EL+ FKAAGDPFTEEFF  FQ+VY+QQ++MLEKLQ R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214

Query: 193 KNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMG 252
           K++LDKK++ I +WR+VSSIIFA TFA VLICSVVAAA+AAPPVAAALAAA+SIP+GSMG
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274

Query: 253 KWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV- 311
           KWIDSL K Y+ AL+GQKE++S+MQVGT+IAIKDLD+IRVLI+R+E+E+ +++  V+F  
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334

Query: 312 IEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKHTN 365
            +EEAVK GVEEIKKKL VFMK+VEDLG QAD CSRDIRRARTVVLQRII+H +
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9SYZ8|U496B_ARATH UPF0496 protein At4g34330 OS=Arabidopsis thaliana GN=At4g34330 PE=3 SV=1

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/365 (61%), Positives = 281/365 (76%), Gaps = 15/365 (4%)

Query: 1   MGGNMSKKTSETSSQ-FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRA 59
           MG   S+K+ E S + +TTEL SYEAAC+ D ++Q+FDT +QARTSHVI+TLA GVEVR+
Sbjct: 1   MGNKTSRKSKEKSGRNYTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRS 60

Query: 60  LSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEK 119
           LSFDSLK V   LL+MNQEV KVIL+CKKDIWK+QE+FE VE YFE+SL+TLDF  AL++
Sbjct: 61  LSFDSLKAVIGSLLDMNQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFFNALKR 120

Query: 120 CLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVY 179
            L+  + + L IL              G+ Y +TL+ELK FK A  PF ++FF++FQSVY
Sbjct: 121 GLQGVQINHLFIL-------------DGNGYKKTLQELKRFKDADRPFDQDFFKMFQSVY 167

Query: 180 KQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAA 239
            QQ  ML+KLQ R+NKLDKKLK I +WRK+SSIIF ATFAT++ICSV+AA MAAP VAAA
Sbjct: 168 NQQKWMLDKLQRRQNKLDKKLKRIRTWRKLSSIIFMATFATLVICSVLAATMAAPHVAAA 227

Query: 240 LAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEI 299
           LAAA+  P+GSMGKWIDSLWKNYE+ +KGQ E+ SSM VGTY+A++DL+NI+ LI RL+ 
Sbjct: 228 LAAATP-PVGSMGKWIDSLWKNYENEIKGQTEVFSSMYVGTYVAVQDLNNIKDLIKRLDT 286

Query: 300 EVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
           E+  +++N ++  E   VKIG+  IK +L VF KNVE+L +QAD CS DIRRARTV+LQR
Sbjct: 287 EIRGMVKNAEYAGELGPVKIGINAIKTQLEVFKKNVEELEIQADMCSTDIRRARTVILQR 346

Query: 360 IIKHT 364
           II  T
Sbjct: 347 IINAT 351

Arabidopsis thaliana (taxid: 3702)

>sp|Q56XQ0|U496I_ARATH UPF0496 protein At2g18630 OS=Arabidopsis thaliana GN=At2g18630 PE=2 SV=3

 Score =  393 bits (1009), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/352 (55%), Positives = 278/352 (78%), Gaps = 1/352 (0%)

Query: 13  SSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECL 72
           +S++T  LSSYE AC  D  L++FD++L  RT+ VIN LA+GVE+++LSFDSL+EVT+CL
Sbjct: 27  NSEYTEHLSSYERACSEDPKLESFDSALHERTNRVINKLASGVEIKSLSFDSLREVTQCL 86

Query: 73  LEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLIL 132
           L+MNQ+VVKVIL+ K+DIW +Q+LF LV  YFES+ +T+DFC+ LE CL RAR SQ++I 
Sbjct: 87  LDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFESTAKTMDFCSELENCLNRARRSQVIIQ 146

Query: 133 VALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLR 192
            A+ QFEEEN+     +Y +TLEELK FK AG+PFT+EFF +F  VYKQQ+ MLE+L   
Sbjct: 147 FAVNQFEEENEDKENRKYEKTLEELKRFKVAGEPFTKEFFALFDLVYKQQVMMLEELHKL 206

Query: 193 KNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMG 252
           K KLDK+L+ I +WR+VS+++F   F +VLI SVVAAA+AAPPV AA+A A ++P+GS+G
Sbjct: 207 KRKLDKRLRNIKTWRRVSNMVFVTAFVSVLIFSVVAAAVAAPPVVAAIAGALAVPVGSVG 266

Query: 253 KWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVI 312
           KW ++LW  YE  ++GQKE+I+S+++GTYI++K++DNI +L+ ++E+E+E+LL+  +F I
Sbjct: 267 KWCNTLWTKYEKVVRGQKEIITSIRIGTYISVKEMDNISILVRKVEVEIESLLKKAEFAI 326

Query: 313 -EEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKH 363
            EE+ V++ ++EIKKKL VF + +E+LG  A     D+ +ARTV+LQRII++
Sbjct: 327 TEEKEVRLAIDEIKKKLDVFTETIEELGEHAGKYCSDVTKARTVILQRIIRY 378

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GW16|U496H_ARATH UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2 SV=1

 Score =  363 bits (931), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/362 (51%), Positives = 271/362 (74%), Gaps = 10/362 (2%)

Query: 10  SETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVT 69
           ++  S ++ +L++Y +ACR D DLQ+FD+SL  RT+ VIN+LA+G + R+LSFD+L EV+
Sbjct: 32  TDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINSLASGAQTRSLSFDALIEVS 91

Query: 70  ECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQL 129
            CLLEMNQEVV+ I+E K+D+W +++L  LV  YF+SS++TLDFC A++ C+KRAR  Q+
Sbjct: 92  GCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKTLDFCNAVDNCVKRARIGQM 151

Query: 130 LILVALQQFEEENDMG------AGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQI 183
           L+  AL+QFE E+           ++Y +TLEEL  FKA+GDPF  +FF + +SVY+QQ+
Sbjct: 152 LLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASGDPFDGDFFMLLESVYEQQV 211

Query: 184 SMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAA 243
            +LE L  +K KLDKKLK I  W+K+S+++F   F +VLI SVVAAA+AAPPV  ALAAA
Sbjct: 212 MLLEILHKQKRKLDKKLKNIKYWKKISNVVFVTAFVSVLIFSVVAAAVAAPPVVTALAAA 271

Query: 244 SSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEA 303
            ++P+GS+GKW + LWK YE A+KGQK+++ SM++G Y+ +KD+DNIRV +D+L+IE+E+
Sbjct: 272 LAVPIGSIGKWCNHLWKKYETAVKGQKDIVLSMRIGAYVTMKDMDNIRVHVDKLKIEMES 331

Query: 304 LLQNVDFVI----EEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
           ++Q VDF +    EE AV++ + EI KK  VF + +E++G  A  CS++I  ART+VL+ 
Sbjct: 332 MMQKVDFALKEKEEEVAVRLSMHEISKKFDVFTERIEEVGDNATKCSKNITLARTIVLRH 391

Query: 360 II 361
           I+
Sbjct: 392 IL 393

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XFE1|U496E_ORYSJ Putative UPF0496 protein 5 OS=Oryza sativa subsp. japonica GN=Os10g0359200 PE=3 SV=2

 Score =  350 bits (899), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 192/325 (59%), Positives = 260/325 (80%), Gaps = 3/325 (0%)

Query: 22  SYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVK 81
           SYEAAC  D +L TFDT+L+ R S  I  +A+GVEVR+LS  SL+EVT CLL+MNQEVV+
Sbjct: 32  SYEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVR 91

Query: 82  VILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEE 141
           V+L+CK+D+W+S +LF+LVE+YFE SL TLDF  AL+K L RARDSQL++ +ALQ+   E
Sbjct: 92  VVLDCKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLALQRHHHE 151

Query: 142 NDMGAGHR--YVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLDKK 199
               A     Y  TL EL+ FKAAG+PFT+EFF  FQ+VY+QQ+SM+ KL+ RK +LD++
Sbjct: 152 PPAAASASELYASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLDRR 211

Query: 200 LKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLW 259
           L+ +  WR+VS I+F  +FA +L+CSVVAAA+AAPPVAAALAAA+S+P+GS GKW+DSL 
Sbjct: 212 LRSVRVWRRVSGIVFLTSFAALLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLL 271

Query: 260 KNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV-IEEEAVK 318
           K Y+ AL G KE++S+MQVGT+IAIKDLD+IRVL++ LE+++ ++  +V+F   +EEAV+
Sbjct: 272 KKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEAVR 331

Query: 319 IGVEEIKKKLGVFMKNVEDLGVQAD 343
            G++E+KKKL +FMK+V+DLG QAD
Sbjct: 332 FGIDEVKKKLELFMKSVDDLGEQAD 356

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2Z6C5|U496E_ORYSI Putative UPF0496 protein 5 OS=Oryza sativa subsp. indica GN=OsI_032118 PE=3 SV=1

 Score =  340 bits (871), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 190/327 (58%), Positives = 257/327 (78%), Gaps = 5/327 (1%)

Query: 22  SYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVK 81
           SYEAAC  D +L TFDT+L+ R S  I  +A+GVEVR+LS  SL+EVT CLL+MNQEVV+
Sbjct: 35  SYEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVR 94

Query: 82  VILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEE 141
           V+L CK+D+W+S +LF+LVE+YFE SL TLDF  AL+K L RARDSQL++ +A+Q+   E
Sbjct: 95  VVLACKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLAVQRHHHE 154

Query: 142 NDMGAGHR----YVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLRKNKLD 197
               A       Y  TL EL+ FKAAG+PFT+EFF  FQ+VY+QQ+SM+ KL+ RK +LD
Sbjct: 155 PPAAAAASASELYASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLD 214

Query: 198 KKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDS 257
           ++L+ +  WR+VS I+F   FA +L+CSVVAAA+AAPPVAAALA A+S+P+GS GKW+DS
Sbjct: 215 RRLRSVRVWRRVSGIVFLTAFAALLVCSVVAAAIAAPPVAAALAPAASMPVGSAGKWMDS 274

Query: 258 LWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV-IEEEA 316
           L K Y+ AL G KE++S+MQVGT+IAIKDLD+IRVL++ LE+++ ++  +V+F   +EEA
Sbjct: 275 LLKKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEA 334

Query: 317 VKIGVEEIKKKLGVFMKNVEDLGVQAD 343
           V+ G++E+KKKL +FMK+V+DLG QAD
Sbjct: 335 VRFGIDEVKKKLELFMKSVDDLGEQAD 361

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9LVR3|U496G_ARATH UPF0496 protein At5g66670 OS=Arabidopsis thaliana GN=At5g66670 PE=2 SV=1

 Score =  284 bits (726), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 156/372 (41%), Positives = 251/372 (67%), Gaps = 12/372 (3%)

Query: 2   GGNMS-KKTSETS--SQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVR 58
           G N+S  KT +T+  SQ++++LSSY +AC+  + L++FD+ L  RT+ +I++LAA  + R
Sbjct: 21  GTNVSLAKTIQTNIRSQYSSDLSSYASACKKYSSLKSFDSLLHERTNSIISSLAAQAKTR 80

Query: 59  ALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALE 118
           +L+ +SL EV   LLE+NQ+ V+VI+E K+D+ K+ +L  LV+ YF+S+ +TLDFC  +E
Sbjct: 81  SLNIESLMEVYGYLLELNQDTVRVIIESKEDVLKNNDLKALVDVYFKSTSKTLDFCNTVE 140

Query: 119 KCLKRARDSQLLILVALQQFEEEN---DMGAGHR--YVRTLEELKNFKAAGDPFTEEFFQ 173
           KC+K+A  SQL+I  A++QFE E    D+G   +  YV+TLEE+  FKA GDPF  EF  
Sbjct: 141 KCVKKAEISQLIIRFAVKQFETETVDTDLGESKKKKYVKTLEEMNKFKAMGDPFDGEFVT 200

Query: 174 IFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAA 233
            ++SVY +Q+ +L++L+  K KL KKL+ I +WR +S+++FA  F TV + SVVAAAM A
Sbjct: 201 QYKSVYDEQVLLLDELRKLKVKLGKKLRNIKTWRILSNVVFATAFVTVFVLSVVAAAMMA 260

Query: 234 PPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVL 293
           PPV +A+A+  + P+  +G W + +WK YE A+K Q+ ++ +M++G       + NI+  
Sbjct: 261 PPVLSAVASGLTTPIEVVGMWCNKMWKEYEKAVKRQRGLVLTMELGVQANNVTMVNIKFE 320

Query: 294 IDRLEIEVEALLQNVDFVIEEE----AVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDI 349
           ++ L I + ++L+ V+F ++ E    A +  ++EIKKK+  F + +E++G +A  CS+ I
Sbjct: 321 VENLSIRISSILKTVNFAVDREENEMATRFAMQEIKKKVEGFTEKIEEVGERAANCSKLI 380

Query: 350 RRARTVVLQRII 361
              R VVL  I+
Sbjct: 381 ALGRLVVLGHIL 392

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVR4|U496F_ARATH UPF0496 protein At5g66660 OS=Arabidopsis thaliana GN=At5g66660 PE=2 SV=1

 Score =  270 bits (691), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/362 (41%), Positives = 237/362 (65%), Gaps = 10/362 (2%)

Query: 10  SETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVT 69
           ++  S+++++LSSY +AC+ D++L++FD+SL  RT+ +I +LAA  E ++L+ DSL EV 
Sbjct: 32  TDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNIIITSLAARAETQSLNLDSLMEVY 91

Query: 70  ECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQL 129
             LLE+NQ  V+VI+E ++D+WK+++L  LV+ YF+S+ +TLDFC  +E C+KR   SQL
Sbjct: 92  GFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKSTSKTLDFCNTVENCVKRTEISQL 151

Query: 130 LILVALQQFEEEN---DMGAGHRYVRT---LEELKNFKAAGDPFTEEFFQIFQSVYKQQI 183
           +I  A++QFE E+   D+G   +  +    LEEL  FKA GDPF  E    F SVY QQ+
Sbjct: 152 IIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFKAMGDPFDGELVTQFDSVYDQQV 211

Query: 184 SMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAA 243
             LE+L+ ++ KLDKK + + + R VS++ FA  + +VL+ SVVA  M+APPV  A+A+ 
Sbjct: 212 LFLEELRKQRRKLDKKQRNVKTLRTVSNVFFATAYVSVLVLSVVATTMSAPPVVCAVASG 271

Query: 244 SSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEA 303
           S+ P+   GKW   +WK YE A+K Q+ ++ +M+    +  + + NIR  +D L   V +
Sbjct: 272 STAPIEITGKWFSQMWKKYEKAVKRQRGLVLTMESRVQVNNEAMKNIRSDVDELRSWVSS 331

Query: 304 LLQNVDFVI----EEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
           +L+ VDF +    EEEA+ + ++ IKK +  F + +E++G  A  CS+ I   R +VL+ 
Sbjct: 332 ILETVDFAVEREEEEEAMGLAMQGIKKHVDGFTEKMEEVGENAAKCSKFIALGRLLVLEH 391

Query: 360 II 361
           I+
Sbjct: 392 IL 393

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
356538813	374	PREDICTED: UPF0496 protein At4g34320-lik	1.0	0.978	0.834	1e-170
225428558	373	PREDICTED: UPF0496 protein At4g34320-lik	0.994	0.975	0.847	1e-169
255556119	380	AT14A, putative [Ricinus communis] gi|22	0.997	0.960	0.821	1e-168
224080287	363	predicted protein [Populus trichocarpa]	0.964	0.972	0.813	1e-168
356545289	373	PREDICTED: UPF0496 protein At4g34320-lik	0.997	0.978	0.820	1e-168
224103459	374	predicted protein [Populus trichocarpa]	0.997	0.975	0.837	1e-165
356521100	371	PREDICTED: UPF0496 protein At4g34320-lik	0.991	0.978	0.771	1e-161
449461132	372	PREDICTED: UPF0496 protein At4g34320-lik	1.0	0.983	0.771	1e-158
297802542	374	hypothetical protein ARALYDRAFT_491233 [	1.0	0.978	0.764	1e-151
15235330	374	uncharacterized protein [Arabidopsis tha	1.0	0.978	0.761	1e-151

>gi|356538813|ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/374 (83%), Positives = 341/374 (91%), Gaps = 8/374 (2%)

Query: 1   MGGNMSKKTSETSS-------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAA 53
           MG +MSKK  ETSS        + TELSSYEAAC+LD+DLQ+FDT+LQART+ VINTLA 
Sbjct: 1   MGSHMSKKIPETSSIGLSTELHYKTELSSYEAACKLDSDLQSFDTTLQARTNQVINTLAV 60

Query: 54  GVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDF 113
           GVEVRALSFDSLK++TECLLEMNQEVVKVIL+CKKDIWKSQELFELVEEYFE+SL+TLDF
Sbjct: 61  GVEVRALSFDSLKQITECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLKTLDF 120

Query: 114 CTALEKCLKRARDSQLLILVALQQFEEENDMGAG-HRYVRTLEELKNFKAAGDPFTEEFF 172
           CTALEKCLKRARDSQLLI VALQQFEEE+    G +RY RTL+E KNFKAAGDPFTEEFF
Sbjct: 121 CTALEKCLKRARDSQLLIHVALQQFEEESSGSGGDNRYPRTLQEFKNFKAAGDPFTEEFF 180

Query: 173 QIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMA 232
           QIFQSVYK QI MLEKLQLRKNKLDKKLKYIHSWRKVSS+IF ATFA VLICSVVAAA+A
Sbjct: 181 QIFQSVYKHQIFMLEKLQLRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIA 240

Query: 233 APPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRV 292
           APPVAAA+AAA+SIP+GSMGKWIDSLW+NYE+ALKGQKE+ISSMQ GTY+AIKDLDNIRV
Sbjct: 241 APPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRV 300

Query: 293 LIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRA 352
           LIDRLEIE+E+LL NVDF IEEEAVK+ +EEIKKKLGVFMKNVEDL VQAD CSRDIRRA
Sbjct: 301 LIDRLEIEIESLLHNVDFAIEEEAVKVAIEEIKKKLGVFMKNVEDLAVQADMCSRDIRRA 360

Query: 353 RTVVLQRIIKHTNN 366
           RTVVLQRIIKH +N
Sbjct: 361 RTVVLQRIIKHPHN 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428558|ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 316/373 (84%), Positives = 349/373 (93%), Gaps = 9/373 (2%)

Query: 1   MGGNMSKKTSETSS--------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLA 52
           MGG+MSKK++ETSS         ++TELSSYEAACR+DTDLQ+FDT+LQARTSHVINTLA
Sbjct: 1   MGGHMSKKSAETSSAITINPNLHYSTELSSYEAACRVDTDLQSFDTTLQARTSHVINTLA 60

Query: 53  AGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLD 112
            GVEVRALSF+SLKEVTECLLEMNQEVVKVILECKKDIWK+QELFELVEEYFE+SLQTLD
Sbjct: 61  VGVEVRALSFNSLKEVTECLLEMNQEVVKVILECKKDIWKNQELFELVEEYFENSLQTLD 120

Query: 113 FCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFF 172
           FCTALEKCLKRARDSQLLI+VALQQFEEE+++  G RY+RTLEELK FKAAGDPFTEEFF
Sbjct: 121 FCTALEKCLKRARDSQLLIVVALQQFEEEDEV-EGSRYLRTLEELKKFKAAGDPFTEEFF 179

Query: 173 QIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMA 232
           QIFQSVY+QQ+ MLEKLQLRK+KLDKKLKYIH+WRKVSS+IFAATFA VLICSVVAAAMA
Sbjct: 180 QIFQSVYRQQMLMLEKLQLRKSKLDKKLKYIHAWRKVSSMIFAATFAAVLICSVVAAAMA 239

Query: 233 APPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRV 292
           APPVAAALAAA+S+PLG+MGKWIDSL KNYE+ALKGQKE+ISSMQVGTY+AIKDLD IRV
Sbjct: 240 APPVAAALAAAASLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTYVAIKDLDTIRV 299

Query: 293 LIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRA 352
           LIDRLEIE+E+LLQ  D+VI+EEAVK G+EEIKKKLGVFMKNV+DLGVQAD CSRDIRRA
Sbjct: 300 LIDRLEIEIESLLQTTDYVIKEEAVKFGIEEIKKKLGVFMKNVDDLGVQADMCSRDIRRA 359

Query: 353 RTVVLQRIIKHTN 365
           RTVVLQRIIK  N
Sbjct: 360 RTVVLQRIIKQPN 372

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556119|ref|XP_002519094.1| AT14A, putative [Ricinus communis] gi|223541757|gb|EEF43305.1| AT14A, putative [Ricinus communis]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 308/375 (82%), Positives = 344/375 (91%), Gaps = 10/375 (2%)

Query: 1   MGGNMSKKTSETSS---------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTL 51
           MGG++SKKT+E SS         Q+ TELSSYEAAC+LD DLQ+FDTSLQ RT+HVINTL
Sbjct: 1   MGGHVSKKTTEASSSAINIHNNLQYITELSSYEAACKLDEDLQSFDTSLQVRTNHVINTL 60

Query: 52  AAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTL 111
           A GVEVR+LSFDSLKEVTECLLEMNQEVVKVILECKKDIWK+QELFELVEEYFE+SLQTL
Sbjct: 61  AVGVEVRSLSFDSLKEVTECLLEMNQEVVKVILECKKDIWKNQELFELVEEYFENSLQTL 120

Query: 112 DFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEF 171
           DFCTALEKCLKRARDSQL ILVALQQFEEEN+ G G+RYV+TLE LKNFK+AGDPFTEEF
Sbjct: 121 DFCTALEKCLKRARDSQLFILVALQQFEEENEAG-GNRYVKTLEGLKNFKSAGDPFTEEF 179

Query: 172 FQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAM 231
           FQIFQSVY+QQ+ MLEKLQ RKNKLDKKLK +H+WRKVSSIIF ATFA VLICSVVAAAM
Sbjct: 180 FQIFQSVYRQQMLMLEKLQHRKNKLDKKLKCLHAWRKVSSIIFVATFAAVLICSVVAAAM 239

Query: 232 AAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIR 291
           AAPPVAAALAAA+SIPLGSMGKWIDSLWKNYE+ALKG+KE+IS+MQVGTY+AIKDLDNIR
Sbjct: 240 AAPPVAAALAAATSIPLGSMGKWIDSLWKNYENALKGEKELISTMQVGTYVAIKDLDNIR 299

Query: 292 VLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRR 351
           VLI+RLEI++EAL+ N +F IE++AVK+ + EI+KKL VFMK++EDLG QADTCSRDIRR
Sbjct: 300 VLINRLEIDIEALMHNAEFAIEQDAVKVAIVEIRKKLDVFMKHIEDLGAQADTCSRDIRR 359

Query: 352 ARTVVLQRIIKHTNN 366
           ARTVVLQRIIKH NN
Sbjct: 360 ARTVVLQRIIKHPNN 374

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080287|ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|222849047|gb|EEE86594.1| predicted protein [Populus trichocarpa]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/376 (81%), Positives = 332/376 (88%), Gaps = 23/376 (6%)

Query: 1   MGGNMSKKTSETSS---------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTL 51
           MGG++SK+ +E SS         Q+TTELSSYEAACRLD DLQ+FDT+LQART+HVINTL
Sbjct: 1   MGGHVSKRPAEASSSAINLNNNLQYTTELSSYEAACRLDKDLQSFDTTLQARTNHVINTL 60

Query: 52  AAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTL 111
           A G+EVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWK QELFELVEEYFE+SLQTL
Sbjct: 61  AVGIEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKDQELFELVEEYFENSLQTL 120

Query: 112 DFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHR-YVRTLEELKNFKAAGDPFTEE 170
           DFC ALEKCLKRARDSQLLIL             AG R YVRTLEELKNFKAAGDPFT+E
Sbjct: 121 DFCAALEKCLKRARDSQLLIL-------------AGEREYVRTLEELKNFKAAGDPFTDE 167

Query: 171 FFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAA 230
           FFQIFQSVY+QQI MLEKLQLRKNKLDKKLK IH+WRKVSS+IF ATFATVLICSVVAAA
Sbjct: 168 FFQIFQSVYRQQIMMLEKLQLRKNKLDKKLKCIHTWRKVSSMIFVATFATVLICSVVAAA 227

Query: 231 MAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNI 290
           M APPV AA+AAAS+IPLGSMGKWIDSLWKNYE+ALKGQKE+IS+MQVGTY+AIKDLDNI
Sbjct: 228 MTAPPVVAAVAAASTIPLGSMGKWIDSLWKNYENALKGQKEVISTMQVGTYVAIKDLDNI 287

Query: 291 RVLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIR 350
           RVLIDRLEIE+EAL++  DF IE  AVK+ +EEIKKKLGVFMKNVEDLGV ADTCSRDI 
Sbjct: 288 RVLIDRLEIEIEALMRTTDFAIEHGAVKVAIEEIKKKLGVFMKNVEDLGVLADTCSRDIM 347

Query: 351 RARTVVLQRIIKHTNN 366
           RARTVVLQRIIK+ NN
Sbjct: 348 RARTVVLQRIIKNPNN 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545289|ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 307/374 (82%), Positives = 338/374 (90%), Gaps = 9/374 (2%)

Query: 1   MGGNMSKKTSETSS--------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLA 52
           MG +MSK+  ETSS         + TELSSYEAAC+LD+DLQ FDT+LQAR + VINTLA
Sbjct: 1   MGSHMSKRIPETSSSIGLSTELHYKTELSSYEAACKLDSDLQFFDTTLQARANQVINTLA 60

Query: 53  AGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLD 112
            GVEVRALSFDSLK++TECLLEMNQEVVKVIL+CKKDIWKSQELFELVEEYFE+SL+TLD
Sbjct: 61  VGVEVRALSFDSLKQITECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLKTLD 120

Query: 113 FCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFF 172
           FCT LEKCLKRARDSQLLI VA+QQFEEE+  G  +RY RTL+E KNFKAAGDPFTEEFF
Sbjct: 121 FCTVLEKCLKRARDSQLLIHVAVQQFEEESGSG-DNRYARTLQEFKNFKAAGDPFTEEFF 179

Query: 173 QIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMA 232
           QIFQSVYK QI MLEKLQLRKNKLDKKLKYIHSWRKVSS+IF ATFA VLICSVVAAA+A
Sbjct: 180 QIFQSVYKHQILMLEKLQLRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIA 239

Query: 233 APPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRV 292
           APPVAAA+AAA+SIP+GSMGKWIDSLW+NYE+ALKGQKE+ISSMQ GTY+AIKDLDNIR+
Sbjct: 240 APPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRI 299

Query: 293 LIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRA 352
           LIDRLEIE+E+LL NVDF IEEEAVK+ +EEIKKKLGVFMKNVEDL VQAD CSRDIRRA
Sbjct: 300 LIDRLEIEIESLLHNVDFAIEEEAVKVAIEEIKKKLGVFMKNVEDLAVQADMCSRDIRRA 359

Query: 353 RTVVLQRIIKHTNN 366
           RTVVLQRIIKH +N
Sbjct: 360 RTVVLQRIIKHPHN 373

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103459|ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|222849472|gb|EEE87019.1| predicted protein [Populus trichocarpa]

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/375 (83%), Positives = 346/375 (92%), Gaps = 10/375 (2%)

Query: 1   MGGNMSKKTSETSS---------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTL 51
           MGG++SK+ +E SS         Q+TT LSSYEAAC LD DLQ+FDT+LQART+HVINTL
Sbjct: 1   MGGHVSKRPAEASSSSINLNNNLQYTTGLSSYEAACLLDKDLQSFDTTLQARTNHVINTL 60

Query: 52  AAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTL 111
           A GVEVRALSFDSLKEVTECLLEMNQEVVKVILECK+DIWK+QELFELVEEYFE+SLQTL
Sbjct: 61  AVGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKRDIWKNQELFELVEEYFENSLQTL 120

Query: 112 DFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEF 171
           DFC ALEKCLKRARDSQLLILVALQQFEEE++ G G +YV+TLEELK+FKAAGDPFTEEF
Sbjct: 121 DFCAALEKCLKRARDSQLLILVALQQFEEESEAG-GSKYVKTLEELKSFKAAGDPFTEEF 179

Query: 172 FQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAM 231
           FQIFQSVY+QQI+MLEKLQLRKNKLDKKLK IH+WRKVSSIIF ATFATVLICSVVAAAM
Sbjct: 180 FQIFQSVYRQQITMLEKLQLRKNKLDKKLKCIHAWRKVSSIIFVATFATVLICSVVAAAM 239

Query: 232 AAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIR 291
           AAPPVAAALAAASSIPLGSMGKWIDS+WKNYE+ALKGQKE+IS+MQVGTY+AIKDLD IR
Sbjct: 240 AAPPVAAALAAASSIPLGSMGKWIDSMWKNYENALKGQKEVISTMQVGTYVAIKDLDTIR 299

Query: 292 VLIDRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRR 351
           VLI+RLEIE+EAL+Q  DF IE +AVK+ +EEIKKKLGVFMKNVEDLG+QADTCSRDIRR
Sbjct: 300 VLINRLEIEIEALMQTTDFAIEHDAVKLAIEEIKKKLGVFMKNVEDLGLQADTCSRDIRR 359

Query: 352 ARTVVLQRIIKHTNN 366
           ARTVVLQRIIK+  N
Sbjct: 360 ARTVVLQRIIKNPQN 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521100|ref|XP_003529196.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/372 (77%), Positives = 332/372 (89%), Gaps = 9/372 (2%)

Query: 1   MGGNMSKKTSETSS------QFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAG 54
           MGG+MSKKT ETSS         TEL SYEAAC+LD+DLQ+F+T++QAR + VINTLA G
Sbjct: 1   MGGHMSKKTPETSSGININADMATELRSYEAACKLDSDLQSFNTTIQARANQVINTLAVG 60

Query: 55  VEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFC 114
           VEVR+LSF+SLK+VTECLLEMNQEVVKVIL+CKKDIWK+ ELFELVEEYF++SLQTLDFC
Sbjct: 61  VEVRSLSFESLKQVTECLLEMNQEVVKVILDCKKDIWKNPELFELVEEYFDNSLQTLDFC 120

Query: 115 TALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQI 174
           TALEKCLKRARD+QLLIL+ALQQFEEE  +G   RY RTL+ELKNFKAAGDPFTEEFFQ+
Sbjct: 121 TALEKCLKRARDNQLLILMALQQFEEETSLGET-RYTRTLQELKNFKAAGDPFTEEFFQM 179

Query: 175 FQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAP 234
           +QSVY QQI MLEKL++R++KLDKK+K IH+WRKVSS+IFAAT A VLICSVVAAA+A P
Sbjct: 180 YQSVYNQQILMLEKLRVRQSKLDKKVKQIHTWRKVSSVIFAATVAAVLICSVVAAAIATP 239

Query: 235 PVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLI 294
            VAAALAA ++IP+GSMGKWIDSL KNYE+A+KG KE+  SMQVG Y+AIKDLDNIRVLI
Sbjct: 240 HVAAALAAVTAIPIGSMGKWIDSLLKNYENAMKGHKEVAISMQVGAYVAIKDLDNIRVLI 299

Query: 295 DRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRART 354
           DRLE+E+E+L QNV+F +EEEAVK+ +EEIKKKLGVFMKNVEDLG+QADTCSRDI RART
Sbjct: 300 DRLEVEIESLFQNVEFALEEEAVKVAIEEIKKKLGVFMKNVEDLGLQADTCSRDIIRART 359

Query: 355 VVLQRIIK--HT 364
           VVLQ+IIK  HT
Sbjct: 360 VVLQKIIKLPHT 371

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461132|ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [Cucumis sativus] gi|449510317|ref|XP_004163630.1| PREDICTED: UPF0496 protein At4g34320-like [Cucumis sativus]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/372 (77%), Positives = 332/372 (89%), Gaps = 6/372 (1%)

Query: 1   MGGNMSKKTSETSSQ------FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAG 54
           MG + SKK+S +S        +TTELSSYEAAC+ D DLQ+FD++LQART   INT+A G
Sbjct: 1   MGAHFSKKSSVSSINLSPNLAYTTELSSYEAACKADADLQSFDSTLQARTHQAINTIAVG 60

Query: 55  VEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFC 114
           VEVRALSFDSLKE+TECLLEMNQEVVKVIL CKKDIWK+QELFELVEEYFE+SLQ+LDFC
Sbjct: 61  VEVRALSFDSLKEITECLLEMNQEVVKVILSCKKDIWKNQELFELVEEYFENSLQSLDFC 120

Query: 115 TALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQI 174
           T L+KCLK+ARDS LLI++A+++FEEE  M  G+ YVRTL+ELKNFKAAGDPFT EFFQI
Sbjct: 121 TELDKCLKKARDSHLLIVMAIERFEEEVKMVDGNGYVRTLQELKNFKAAGDPFTNEFFQI 180

Query: 175 FQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAP 234
           F +VY+ QI MLEKL +RKNKLDKKLK + +WRKVSS+IF ATFATVLICS+VAAAMAAP
Sbjct: 181 FNAVYRHQIGMLEKLVIRKNKLDKKLKSMSTWRKVSSMIFIATFATVLICSIVAAAMAAP 240

Query: 235 PVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLI 294
           PVAAA+AAA+SIP+GS+GKWIDSLWKNYE ALKGQKE++SSMQVGTY+AIKD+DNIRVLI
Sbjct: 241 PVAAAMAAAASIPVGSVGKWIDSLWKNYEAALKGQKEVVSSMQVGTYLAIKDMDNIRVLI 300

Query: 295 DRLEIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRART 354
           D+L +E+E+LL+  DF IEEEAVK+GVEE+KKKLG FMKNVEDLGVQAD+CSRDIRRART
Sbjct: 301 DKLTMEIESLLKKADFAIEEEAVKLGVEEMKKKLGQFMKNVEDLGVQADSCSRDIRRART 360

Query: 355 VVLQRIIKHTNN 366
           VVLQRIIKH NN
Sbjct: 361 VVLQRIIKHPNN 372

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802542|ref|XP_002869155.1| hypothetical protein ARALYDRAFT_491233 [Arabidopsis lyrata subsp. lyrata] gi|297314991|gb|EFH45414.1| hypothetical protein ARALYDRAFT_491233 [Arabidopsis lyrata subsp. lyrata]

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 282/369 (76%), Positives = 331/369 (89%), Gaps = 3/369 (0%)

Query: 1   MGGNMSKKTSETSSQ---FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEV 57
           MG   SKK+ ETS++   +TTEL SYEAAC+ DT+LQ+FDT L+ARTSHVI+TLA GVEV
Sbjct: 1   MGNQTSKKSQETSAKSVHYTTELRSYEAACKADTELQSFDTCLKARTSHVISTLATGVEV 60

Query: 58  RALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTAL 117
           RALSFDSLKEVT+CLLEMNQEVVKVIL+CKKDIWK+QE+FELVE+YFE+SL+TLDFC AL
Sbjct: 61  RALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAAL 120

Query: 118 EKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQS 177
           EK L+RARDS LLILVALQQFE+E+ +  G+ Y +TLEELKNFK A  PF E+FF++FQS
Sbjct: 121 EKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEELKNFKDAESPFNEDFFKMFQS 180

Query: 178 VYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVA 237
           VYKQQ+ MLEKLQLRKNKLDKKLK IH+WRK+SSIIF ATFATVLICSVVAAAMAAPPVA
Sbjct: 181 VYKQQMLMLEKLQLRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVVAAAMAAPPVA 240

Query: 238 AALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRL 297
           AALAAA+++PLGSMGKWIDSLWKNYE+ALKGQKE+ISSMQ GT++A+KDLDNIRVLI+RL
Sbjct: 241 AALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIERL 300

Query: 298 EIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVL 357
           EIE+  ++++ +F +E  AVKIG+++IKKKL VF KNVE+LG QAD CSRDIRRARTV+L
Sbjct: 301 EIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCSRDIRRARTVIL 360

Query: 358 QRIIKHTNN 366
           QRIIKH NN
Sbjct: 361 QRIIKHPNN 369

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235330|ref|NP_195158.1| uncharacterized protein [Arabidopsis thaliana] gi|75213510|sp|Q9SYZ7.1|U496A_ARATH RecName: Full=UPF0496 protein At4g34320 gi|4455177|emb|CAB36709.1| putative protein [Arabidopsis thaliana] gi|7270382|emb|CAB80149.1| putative protein [Arabidopsis thaliana] gi|332660959|gb|AEE86359.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/369 (76%), Positives = 329/369 (89%), Gaps = 3/369 (0%)

Query: 1   MGGNMSKKTSETSSQ---FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEV 57
           MG   SKK+ ETS++   +TTEL SY AAC+ DT+LQ+FDT LQARTSHVI+TLA GVEV
Sbjct: 1   MGNQTSKKSQETSAKSVHYTTELRSYAAACKADTELQSFDTCLQARTSHVISTLATGVEV 60

Query: 58  RALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTAL 117
           RALSFDSLKEVT+CLLEMNQEVVKVIL+CKKDIWK+QE+FELVE+YFE+SL+TLDFC AL
Sbjct: 61  RALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAAL 120

Query: 118 EKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQS 177
           EK L+RARDS LLILVALQQFE+E+ +  G+ Y +TLEELKNFK A  PF E+FF++FQS
Sbjct: 121 EKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEELKNFKDAESPFNEDFFKMFQS 180

Query: 178 VYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVA 237
           VYKQQ+ MLEKLQ RKNKLDKKLK IH+WRK+SSIIF ATFATVLICSVVAAAMAAPPVA
Sbjct: 181 VYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVVAAAMAAPPVA 240

Query: 238 AALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRL 297
           AALAAA+++PLGSMGKWIDSLWKNYE+ALKGQKE+ISSMQ GT++A+KDLDNIRVLI+RL
Sbjct: 241 AALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIERL 300

Query: 298 EIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVL 357
           EIE+  ++++ +F +E  AVKIG+++IKKKL VF KNVE+LG QAD CSRDIRRARTV+L
Sbjct: 301 EIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCSRDIRRARTVIL 360

Query: 358 QRIIKHTNN 366
           QRIIKH NN
Sbjct: 361 QRIIKHPNN 369

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:2116214	374	AT4G34320 "AT4G34320" [Arabido	1.0	0.978	0.707	2.5e-136
TAIR|locus:2116139	354	AT4G34330 "AT4G34330" [Arabido	0.956	0.988	0.567	1.7e-100
TAIR|locus:2053962	393	AT2G18630 [Arabidopsis thalian	0.959	0.893	0.505	1.1e-96
TAIR|locus:1005716837	412	AT5G66675 "AT5G66675" [Arabido	0.961	0.854	0.469	7.5e-89
TAIR|locus:2173649	408	AT5G66670 "AT5G66670" [Arabido	0.983	0.882	0.381	8.2e-67
TAIR|locus:2173639	398	AT5G66660 "AT5G66660" [Arabido	0.961	0.884	0.381	7.4e-66
TAIR|locus:2095395	374	AT3G28270 "AT3G28270" [Arabido	0.928	0.909	0.301	6.3e-37
TAIR|locus:2830181	385	AT14A "AT3G28300" [Arabidopsis	0.866	0.823	0.272	1.3e-29
TAIR|locus:2095410	385	AT14A [Arabidopsis thaliana (t	0.866	0.823	0.272	1.3e-29
TAIR|locus:2095425	384	AT3G28310 "AT3G28310" [Arabido	0.874	0.833	0.255	3.9e-28

TAIR|locus:2116214 AT4G34320 "AT4G34320" [Arabidopsis thaliana (taxid:3702)]

 Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
 Identities = 261/369 (70%), Positives = 306/369 (82%)

Query:     1 MGGNMSKKTSETSSQ---FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEV 57
             MG   SKK+ ETS++   +TTEL SY AAC+ DT+LQ+FDT LQARTSHVI+TLA GVEV
Sbjct:     1 MGNQTSKKSQETSAKSVHYTTELRSYAAACKADTELQSFDTCLQARTSHVISTLATGVEV 60

Query:    58 RALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTAL 117
             RALSFDSLKEVT+CLLEMNQEVVKVIL+CKKDIWK+QE+FELVE+YFE+SL+TLDFC AL
Sbjct:    61 RALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAAL 120

Query:   118 EKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQS 177
             EK L+RARDS LLILVALQQFE+E+ +  G+ Y +TLEELKNFK A  PF E+FF++FQS
Sbjct:   121 EKGLRRARDSHLLILVALQQFEDESLVQGGNGYKKTLEELKNFKDAESPFNEDFFKMFQS 180

Query:   178 VYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXX 237
             VYKQQ+ MLEKLQ RKNKLDKKLK IH+WRK+SSIIF ATFATVLIC             
Sbjct:   181 VYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVVAAAMAAPPVA 240

Query:   238 XXXXXXXXXXLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRL 297
                       LGSMGKWIDSLWKNYE+ALKGQKE+ISSMQ GT++A+KDLDNIRVLI+RL
Sbjct:   241 AALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIERL 300

Query:   298 EIEVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVL 357
             EIE+  ++++ +F +E  AVKIG+++IKKKL VF KNVE+LG QAD CSRDIRRARTV+L
Sbjct:   301 EIEITGMVKSAEFAVEHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCSRDIRRARTVIL 360

Query:   358 QRIIKHTNN 366
             QRIIKH NN
Sbjct:   361 QRIIKHPNN 369

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2116139 AT4G34330 "AT4G34330" [Arabidopsis thaliana (taxid:3702)]

 Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
 Identities = 207/365 (56%), Positives = 263/365 (72%)

Query:     1 MGGNMSKKTSETSSQ-FTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRA 59
             MG   S+K+ E S + +TTEL SYEAAC+ D ++Q+FDT +QARTSHVI+TLA GVEVR+
Sbjct:     1 MGNKTSRKSKEKSGRNYTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRS 60

Query:    60 LSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEK 119
             LSFDSLK V   LL+MNQEV KVIL+CKKDIWK+QE+FE VE YFE+SL+TLDF  AL++
Sbjct:    61 LSFDSLKAVIGSLLDMNQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFFNALKR 120

Query:   120 CLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVY 179
              L+  + + L IL          D   G+ Y +TL+ELK FK A  PF ++FF++FQSVY
Sbjct:   121 GLQGVQINHLFIL----------D---GNGYKKTLQELKRFKDADRPFDQDFFKMFQSVY 167

Query:   180 KQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXX 239
              QQ  ML+KLQ R+NKLDKKLK I +WRK+SSIIF ATFAT++IC               
Sbjct:   168 NQQKWMLDKLQRRQNKLDKKLKRIRTWRKLSSIIFMATFATLVICSVLAATMAAPHVAAA 227

Query:   240 XXXXXXXXLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEI 299
                     +GSMGKWIDSLWKNYE+ +KGQ E+ SSM VGTY+A++DL+NI+ LI RL+ 
Sbjct:   228 LAAATPP-VGSMGKWIDSLWKNYENEIKGQTEVFSSMYVGTYVAVQDLNNIKDLIKRLDT 286

Query:   300 EVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
             E+  +++N ++  E   VKIG+  IK +L VF KNVE+L +QAD CS DIRRARTV+LQR
Sbjct:   287 EIRGMVKNAEYAGELGPVKIGINAIKTQLEVFKKNVEELEIQADMCSTDIRRARTVILQR 346

Query:   360 IIKHT 364
             II  T
Sbjct:   347 IINAT 351

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2053962 AT2G18630 [Arabidopsis thaliana (taxid:3702)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 178/352 (50%), Positives = 258/352 (73%)

Query:    13 SSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECL 72
             +S++T  LSSYE AC  D  L++FD++L  RT+ VIN LA+GVE+++LSFDSL+EVT+CL
Sbjct:    27 NSEYTEHLSSYERACSEDPKLESFDSALHERTNRVINKLASGVEIKSLSFDSLREVTQCL 86

Query:    73 LEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLIL 132
             L+MNQ+VVKVIL+ K+DIW +Q+LF LV  YFES+ +T+DFC+ LE CL RAR SQ++I 
Sbjct:    87 LDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFESTAKTMDFCSELENCLNRARRSQVIIQ 146

Query:   133 VALQQFEEENDMGAGHRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQISMLEKLQLR 192
              A+ QFEEEN+     +Y +TLEELK FK AG+PFT+EFF +F  VYKQQ+ MLE+L   
Sbjct:   147 FAVNQFEEENEDKENRKYEKTLEELKRFKVAGEPFTKEFFALFDLVYKQQVMMLEELHKL 206

Query:   193 KNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXXXXXXXXXXLGSMG 252
             K KLDK+L+ I +WR+VS+++F   F +VLI                        +GS+G
Sbjct:   207 KRKLDKRLRNIKTWRRVSNMVFVTAFVSVLIFSVVAAAVAAPPVVAAIAGALAVPVGSVG 266

Query:   253 KWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVI 312
             KW ++LW  YE  ++GQKE+I+S+++GTYI++K++DNI +L+ ++E+E+E+LL+  +F I
Sbjct:   267 KWCNTLWTKYEKVVRGQKEIITSIRIGTYISVKEMDNISILVRKVEVEIESLLKKAEFAI 326

Query:   313 -EEEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRIIKH 363
              EE+ V++ ++EIKKKL VF + +E+LG  A     D+ +ARTV+LQRII++
Sbjct:   327 TEEKEVRLAIDEIKKKLDVFTETIEELGEHAGKYCSDVTKARTVILQRIIRY 378

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:1005716837 AT5G66675 "AT5G66675" [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 170/362 (46%), Positives = 254/362 (70%)

Query:    10 SETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVT 69
             ++  S ++ +L++Y +ACR D DLQ+FD+SL  RT+ VIN+LA+G + R+LSFD+L EV+
Sbjct:    32 TDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINSLASGAQTRSLSFDALIEVS 91

Query:    70 ECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQL 129
              CLLEMNQEVV+ I+E K+D+W +++L  LV  YF+SS++TLDFC A++ C+KRAR  Q+
Sbjct:    92 GCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKTLDFCNAVDNCVKRARIGQM 151

Query:   130 LILVALQQFEEEND-----MGAG-HRYVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQI 183
             L+  AL+QFE E+      +  G ++Y +TLEEL  FKA+GDPF  +FF + +SVY+QQ+
Sbjct:   152 LLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASGDPFDGDFFMLLESVYEQQV 211

Query:   184 SMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXXXXXX 243
              +LE L  +K KLDKKLK I  W+K+S+++F   F +VLI                    
Sbjct:   212 MLLEILHKQKRKLDKKLKNIKYWKKISNVVFVTAFVSVLIFSVVAAAVAAPPVVTALAAA 271

Query:   244 XXXXLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEA 303
                 +GS+GKW + LWK YE A+KGQK+++ SM++G Y+ +KD+DNIRV +D+L+IE+E+
Sbjct:   272 LAVPIGSIGKWCNHLWKKYETAVKGQKDIVLSMRIGAYVTMKDMDNIRVHVDKLKIEMES 331

Query:   304 LLQNVDFVI---EEE-AVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
             ++Q VDF +   EEE AV++ + EI KK  VF + +E++G  A  CS++I  ART+VL+ 
Sbjct:   332 MMQKVDFALKEKEEEVAVRLSMHEISKKFDVFTERIEEVGDNATKCSKNITLARTIVLRH 391

Query:   360 II 361
             I+
Sbjct:   392 IL 393

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2173649 AT5G66670 "AT5G66670" [Arabidopsis thaliana (taxid:3702)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 142/372 (38%), Positives = 233/372 (62%)

Query:     2 GGNMS-KKTSETS--SQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVR 58
             G N+S  KT +T+  SQ++++LSSY +AC+  + L++FD+ L  RT+ +I++LAA  + R
Sbjct:    21 GTNVSLAKTIQTNIRSQYSSDLSSYASACKKYSSLKSFDSLLHERTNSIISSLAAQAKTR 80

Query:    59 ALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALE 118
             +L+ +SL EV   LLE+NQ+ V+VI+E K+D+ K+ +L  LV+ YF+S+ +TLDFC  +E
Sbjct:    81 SLNIESLMEVYGYLLELNQDTVRVIIESKEDVLKNNDLKALVDVYFKSTSKTLDFCNTVE 140

Query:   119 KCLKRARDSQLLILVALQQFEEEN---DMGAGHR--YVRTLEELKNFKAAGDPFTEEFFQ 173
             KC+K+A  SQL+I  A++QFE E    D+G   +  YV+TLEE+  FKA GDPF  EF  
Sbjct:   141 KCVKKAEISQLIIRFAVKQFETETVDTDLGESKKKKYVKTLEEMNKFKAMGDPFDGEFVT 200

Query:   174 IFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXX 233
              ++SVY +Q+ +L++L+  K KL KKL+ I +WR +S+++FA  F TV +          
Sbjct:   201 QYKSVYDEQVLLLDELRKLKVKLGKKLRNIKTWRILSNVVFATAFVTVFVLSVVAAAMMA 260

Query:   234 XXXXXXXXXXXXXXLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVL 293
                           +  +G W + +WK YE A+K Q+ ++ +M++G       + NI+  
Sbjct:   261 PPVLSAVASGLTTPIEVVGMWCNKMWKEYEKAVKRQRGLVLTMELGVQANNVTMVNIKFE 320

Query:   294 IDRLEIEVEALLQNVDFVIEEE----AVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDI 349
             ++ L I + ++L+ V+F ++ E    A +  ++EIKKK+  F + +E++G +A  CS+ I
Sbjct:   321 VENLSIRISSILKTVNFAVDREENEMATRFAMQEIKKKVEGFTEKIEEVGERAANCSKLI 380

Query:   350 RRARTVVLQRII 361
                R VVL  I+
Sbjct:   381 ALGRLVVLGHIL 392

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2173639 AT5G66660 "AT5G66660" [Arabidopsis thaliana (taxid:3702)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 138/362 (38%), Positives = 222/362 (61%)

Query:    10 SETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVT 69
             ++  S+++++LSSY +AC+ D++L++FD+SL  RT+ +I +LAA  E ++L+ DSL EV 
Sbjct:    32 TDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNIIITSLAARAETQSLNLDSLMEVY 91

Query:    70 ECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQL 129
               LLE+NQ  V+VI+E ++D+WK+++L  LV+ YF+S+ +TLDFC  +E C+KR   SQL
Sbjct:    92 GFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKSTSKTLDFCNTVENCVKRTEISQL 151

Query:   130 LILVALQQFEEEN---DMGAGHR---YVRTLEELKNFKAAGDPFTEEFFQIFQSVYKQQI 183
             +I  A++QFE E+   D+G   +   Y +TLEEL  FKA GDPF  E    F SVY QQ+
Sbjct:   152 IIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFKAMGDPFDGELVTQFDSVYDQQV 211

Query:   184 SMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXXXXXX 243
               LE+L+ ++ KLDKK + + + R VS++ FA  + +VL+                    
Sbjct:   212 LFLEELRKQRRKLDKKQRNVKTLRTVSNVFFATAYVSVLVLSVVATTMSAPPVVCAVASG 271

Query:   244 XXXXLGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEA 303
                 +   GKW   +WK YE A+K Q+ ++ +M+    +  + + NIR  +D L   V +
Sbjct:   272 STAPIEITGKWFSQMWKKYEKAVKRQRGLVLTMESRVQVNNEAMKNIRSDVDELRSWVSS 331

Query:   304 LLQNVDFVIE----EEAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQR 359
             +L+ VDF +E    EEA+ + ++ IKK +  F + +E++G  A  CS+ I   R +VL+ 
Sbjct:   332 ILETVDFAVEREEEEEAMGLAMQGIKKHVDGFTEKMEEVGENAAKCSKFIALGRLLVLEH 391

Query:   360 II 361
             I+
Sbjct:   392 IL 393

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095395 AT3G28270 "AT3G28270" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 108/358 (30%), Positives = 188/358 (52%)

Query:    20 LSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALS-FDSLKEVTECLLEMNQE 78
             +S+Y++AC     L++FD SLQ RT+ +I++L    +  + S  D+  E+++ L+E+ Q 
Sbjct:    16 MSAYKSACEEHPKLKSFDASLQQRTNKMIDSLTVEDKNGSSSPHDAHMELSKHLVEVTQG 75

Query:    79 VVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQF 138
             V   I E + D+W +Q L  LV  YFE++ +TL+    +E C++ A   QLLI  AL +F
Sbjct:    76 VADFITEIEDDVWDNQALKYLVLAYFENTKKTLEIFKTIENCVENAEMGQLLIREALAEF 135

Query:   139 EEEN---DMGAGHR-YVRTLEELKNFKAAGDPFTEEFFQI-FQSVYKQQISMLEKLQLRK 193
             E+E+   D+G   + Y +TLE+LK+FK  GDPF  +     F+ + KQQ S+LE++   +
Sbjct:   136 EKESAEKDVGGKKKKYEKTLEDLKSFKEMGDPFDGKVLTTQFERIKKQQESLLEEVSETR 195

Query:   194 NKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXXXXXXX-XXXLGSMG 252
              K+  ++  +     +++++F A FA V +                          G  G
Sbjct:   196 KKIQDEISNLEKKTLITNVVFGAAFAIVAVASIALIATGVGAAAGFGALAAPLLAAGWAG 255

Query:   253 KWI------DSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQ 306
              +       D+L K  E  LK  +E+  S++ G     +  + + +L+D LE  ++ +L+
Sbjct:   256 VYTTLDKKKDALNKQLE-GLKKVEEIEESVEKGIKTNEEATETVSILVDGLEDRIKNMLK 314

Query:   307 NVDFVIEEE----AVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRI 360
              VD  I+ E    A +I + +I KK+    K + ++G   +  S+ I +AR  VLQ+I
Sbjct:   315 LVDNAIDHEDNEAATRIVLTQISKKVEKLTKKITEVGESVEDHSKLIAKARLQVLQKI 372

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2830181 AT14A "AT3G28300" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 92/337 (27%), Positives = 172/337 (51%)

Query:     9 TSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFD---SL 65
             + E   +++  L +Y +AC    +L++FD+ LQ +TS++IN+  +  +   +      + 
Sbjct:     4 SKENMLKYSAHLRAYNSACGDHPELKSFDSELQQKTSNLINSFTSDAKTGLVPLPQHAAY 63

Query:    66 KEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRAR 125
             KE T+ L E+NQ+V   I+   + +W++  L  LVE YFES+ +TLD    + + +  A+
Sbjct:    64 KEFTKHLAEVNQQVSDYIIGYGEVVWENSTLRSLVETYFESAKKTLDIAENVTEYVDEAK 123

Query:   126 DSQLLILVALQQFEE--ENDMGAG-HRYVRTLEELKNFKAAGDPFT-EEFFQIFQSVYKQ 181
               +  I+ A+ QFE+  END+G    RY  TL ELK F+A G+PF  ++F  +F+ ++K+
Sbjct:   124 RGERYIVAAVAQFEKDKENDVGKKTKRYENTLRELKKFEAMGNPFDGDKFTTLFKLMHKE 183

Query:   182 QISMLEKLQLRKNKLDKKLKYIH-------SWRKVSSIIFAATFATVLICXXXXXXXXXX 234
             Q S+LE+++  K KLD++LK I         W  +S+++F   F  V +           
Sbjct:   184 QESLLERVRETKEKLDEELKNIEMEISSRKKWSIISNVLFIGAFVAVAV-GSMVLVCTGV 242

Query:   235 XXXXXXXXXXXXXLGSMGKWID--SLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRV 292
                          L ++G W+   ++ +N   A + Q+E +           K ++  +V
Sbjct:   243 GAGVGVAGLLSLPLIAIG-WVGVHTILENKIQAREKQEEALKKAHRIANEMDKGMETDKV 301

Query:   293 LIDRLEIEVEALLQNVDFVIE--EEAVKIGVEEIKKK 327
              ++ +  +V AL   +  ++   ++A + G  E+  K
Sbjct:   302 DMNSISGKVHALKSKITSMLNAVKDATEDGANEVDTK 338

GO:0005737 "cytoplasm" evidence=ISS;IDA;TAS

GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0008305 "integrin complex" evidence=ISS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0016337 "cell-cell adhesion" evidence=IMP

TAIR|locus:2095410 AT14A [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 92/337 (27%), Positives = 172/337 (51%)

Query:     9 TSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFD---SL 65
             + E   +++  L +Y +AC    +L++FD+ LQ +TS++IN+  +  +   +      + 
Sbjct:     4 SKENMLKYSAHLRAYNSACGDHPELKSFDSELQQKTSNLINSFTSDAKTGLVPLPQHAAY 63

Query:    66 KEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRAR 125
             KE T+ L E+NQ+V   I+   + +W++  L  LVE YFES+ +TLD    + + +  A+
Sbjct:    64 KEFTKHLAEVNQQVSDYIIGYGEVVWENSTLRSLVETYFESAKKTLDIAENVTEYVDEAK 123

Query:   126 DSQLLILVALQQFEE--ENDMGAG-HRYVRTLEELKNFKAAGDPFT-EEFFQIFQSVYKQ 181
               +  I+ A+ QFE+  END+G    RY  TL ELK F+A G+PF  ++F  +F+ ++K+
Sbjct:   124 RGERYIVAAVAQFEKDKENDVGKKTKRYENTLRELKKFEAMGNPFDGDKFTTLFKLMHKE 183

Query:   182 QISMLEKLQLRKNKLDKKLKYIH-------SWRKVSSIIFAATFATVLICXXXXXXXXXX 234
             Q S+LE+++  K KLD++LK I         W  +S+++F   F  V +           
Sbjct:   184 QESLLERVRETKEKLDEELKNIEMEISSRKKWSIISNVLFIGAFVAVAV-GSMVLVCTGV 242

Query:   235 XXXXXXXXXXXXXLGSMGKWID--SLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRV 292
                          L ++G W+   ++ +N   A + Q+E +           K ++  +V
Sbjct:   243 GAGVGVAGLLSLPLIAIG-WVGVHTILENKIQAREKQEEALKKAHRIANEMDKGMETDKV 301

Query:   293 LIDRLEIEVEALLQNVDFVIE--EEAVKIGVEEIKKK 327
              ++ +  +V AL   +  ++   ++A + G  E+  K
Sbjct:   302 DMNSISGKVHALKSKITSMLNAVKDATEDGANEVDTK 338

GO:0009507 "chloroplast" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2095425 AT3G28310 "AT3G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 88/345 (25%), Positives = 178/345 (51%)

Query:     9 TSETSSQFTTELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSL-KE 67
             + + +S+++  + +Y AAC    DL++FD+ +Q RTS++I++L    +  ++S  ++ KE
Sbjct:     4 SKDKTSRYSEHVDAYRAACGHHPDLKSFDSKIQQRTSNLIDSLTVEAKTGSVSPHAVHKE 63

Query:    68 VTEC-LLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARD 126
             V +  L+E+++ V  VI EC +++W++  L  LV++YF S+++TL     + +C+  A+ 
Sbjct:    64 VIDIHLVEVSKAVADVITECGEEVWENGTLQSLVKDYFNSTMETLKIFETVTQCVHEAKR 123

Query:   127 SQLLILVALQQFE---EENDMGAGH-RYVRTLEELKNFKAAGDPFTEEFFQI-FQSVYKQ 181
              Q  I  A+ QF+   EE D+G    RY +TLEEL  FKA G+PF +   +  F+ + KQ
Sbjct:   124 GQRYIKAAVAQFKKDSEEKDVGVKKKRYGKTLEELMKFKAMGNPFDDGLLKTQFELMNKQ 183

Query:   182 QISMLEKLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICXXXXXXXXXXXXXXXXX 241
             Q S+ +++   K ++ K+++ +   +++S++  A   + V+                   
Sbjct:   184 QESLFDRVTETKERIAKEIEEVQ--KRISNVNTATIVSHVVFGAAAFGYAAGCIALMCTG 241

Query:   242 XXXXXXLG--SMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEI 299
                    G  ++   I   W    + L    E +          +K L+ ++ + +R+  
Sbjct:   242 VGAPLGAGMVTLLPVIVVQWVGVNYVLNNSLEALQKQ-------LKALNKVKPIPERITE 294

Query:   300 EVEALLQNVDFVIEEEAVKIGVEEIKKKLGVFMKNVED-LGVQAD 343
              +EA  + +  V E+      V+E+K ++   ++ V+D +G + D
Sbjct:   295 GMEADKEGMKSVPEQ------VDELKDQISSLLQTVDDAIGSEGD 333

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10QE9	U496A_ORYSJ	No assigned EC number	0.7146	0.9371	0.8840	yes	no
Q9SYZ7	U496A_ARATH	No assigned EC number	0.7615	1.0	0.9786	yes	no
A2XDK8	U496A_ORYSI	No assigned EC number	0.7146	0.9371	0.8840	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_IX000270 hypothetical protein (374 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
pfam05055	336	pfam05055, DUF677, Protein of unknown function (DU	1e-146
pfam05633	389	pfam05633, DUF793, Protein of unknown function (DU	0.001

>gnl|CDD|218403 pfam05055, DUF677, Protein of unknown function (DUF677)

 Score =  416 bits (1070), Expect = e-146
 Identities = 183/337 (54%), Positives = 251/337 (74%), Gaps = 10/337 (2%)

Query: 33  LQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWK 92
           L++FD+SLQ RT+ +I++L  G + R+LS DSL EVT+CLLEMNQ+VVKVI+E K+D+W+
Sbjct: 1   LKSFDSSLQQRTNFLISSLTTGAKTRSLSHDSLMEVTKCLLEMNQDVVKVIIESKEDVWE 60

Query: 93  SQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEE---NDMGA-GH 148
           +Q+LF LV  YFES+ +TLDFC  LE C++RA  SQLLI  A+ QFE+E    D+G    
Sbjct: 61  NQDLFSLVNVYFESTKKTLDFCETLENCVERAERSQLLIREAVAQFEKESLDKDVGKKKK 120

Query: 149 RYVRTLEELKNFKAAGDPFT-EEFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSWR 207
           +Y +TLEELK FKA GDPF  EEF   FQSVYKQQ+ MLE+L+  K KLDKKL+ I +WR
Sbjct: 121 KYEKTLEELKKFKAMGDPFDGEEFTTQFQSVYKQQVLMLEELRKTKKKLDKKLRNIKTWR 180

Query: 208 KVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALK 267
            +S+++F A F  VL+ SVVAAAM APPV   +A A ++PL ++GKW+ S WK YE ALK
Sbjct: 181 IISNVVFVAAFVAVLVLSVVAAAMGAPPV-VGVAGALAVPLEAVGKWVGSAWKKYEEALK 239

Query: 268 GQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEE----AVKIGVEE 323
            QKE+ISSM+ G  + +KD++NI +L+DRLE E+ ++L+ V+F +E E    AV+I ++E
Sbjct: 240 RQKEIISSMEKGIQVNVKDMENISILVDRLESEITSMLKTVEFAVEHEENEVAVRIAMDE 299

Query: 324 IKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRI 360
           IKKK+ V  + +E++G +A  CS+ I + RTVVLQ+I
Sbjct: 300 IKKKVEVLTEKIEEVGEEAAKCSKFIAKGRTVVLQKI 336

This family consists of AT14A like proteins from Arabidopsis thaliana. At14a has a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and localises partly to the plasma membrane. Length = 336

>gnl|CDD|218666 pfam05633, DUF793, Protein of unknown function (DUF793)

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 77  QEVVKVILECKKDIWKSQELFE-LVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVAL 135
           +E  + IL   +D   S+   + LV E  + S++ LD C A+   +   R  Q L  +A+
Sbjct: 80  EEEFRAILFNHRDTQISKPPLDRLVPEMLDRSVKALDVCNAVRDGIDSIRQWQKLAEIAV 139

Query: 136 QQFEEENDMGAG--HRYVRTLEEL 157
              ++   +G G   R  + L +L
Sbjct: 140 TALKQRRPLGEGQVRRAKKALTDL 163

This family consists of several plant proteins of unknown function. Length = 389

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
PF05055	336	DUF677: Protein of unknown function (DUF677); Inte	100.0
PF05633	389	DUF793: Protein of unknown function (DUF793); Inte	100.0
PF03087	231	DUF241: Arabidopsis protein of unknown function; I	98.38
TIGR02894	161	DNA_bind_RsfA transcription factor, RsfA family. I	91.93
KOG4191	516	consensus Histone acetyltransferases PCAF/SAGA/ADA	81.27
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	80.91

>PF05055 DUF677: Protein of unknown function (DUF677); InterPro: IPR007749 This entry contains proteins belonging to the UPF0496 family, found in plants

Probab=100.00  E-value=1.3e-82  Score=618.85  Aligned_cols=327  Identities=60%  Similarity=0.894  Sum_probs=315.0

Q ss_pred             HhhHHHHHHHHHHHHhhhhccCcCCCccCHhhHHHHHHHHhccCHHHHHHHHhhccccccchhHhHHHHHHHHhhHHHHH
Q 040233           33 LQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELVEEYFESSLQTLD  112 (366)
Q Consensus        33 L~~F~~~l~~r~~~l~~sL~~~~~~~~lSl~w~~~~~~~lLe~~qe~~~~i~~~~~~~w~~~~l~~Lv~~Yfd~S~kalD  112 (366)
                      |++||++|++||+++|+||+.|++.+++|++++++++++||||+||++.+|+++++++|++|+|++||.+|||.|.+|||
T Consensus         1 l~~fd~~l~~~t~~~i~sl~~~~~~~s~s~~s~~~~t~~Lle~~Qevv~~ile~~~di~~~~~L~~Lv~~YFd~S~~a~~   80 (336)
T PF05055_consen    1 LQSFDSSLQERTNRVISSLATGVETRSLSFDSLKEVTECLLEMNQEVVKVILECKKDIWKNPELFRLVSDYFDSSLEASD   80 (336)
T ss_pred             CCCccHHHHHHHHHHHHHhhhccccCCCChHHHHHHHHHHhCCChHHHHHHHHHHHHhhcChhHHHHHHHHHHhhHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHhHHHHHHHhhccccccC----CcchhHHHHHHHHHhhHhcCCCCChH-HHHHHHHHHHhHHHHHH
Q 040233          113 FCTALEKCLKRARDSQLLILVALQQFEEENDM----GAGHRYVRTLEELKNFKAAGDPFTEE-FFQIFQSVYKQQISMLE  187 (366)
Q Consensus       113 iCnaL~~~I~~~r~~~~~l~~al~~l~~~~~~----~~~~~~~~al~~L~~f~~~~npf~~~-~~~~f~~i~~~~~~ll~  187 (366)
                      ||++|++||+|+|.+|++|+.+++.|+.++..    .++++|.+|+++|++|+.++|||+.+ ++.+|+.||++|++|++
T Consensus        81 ~C~~L~k~I~~aR~~~~~I~~al~~~~~e~~~~d~g~~~~~~~~tl~eL~~F~~~~NPFs~~~~~~~F~~i~~~~~~Ll~  160 (336)
T PF05055_consen   81 FCEALLKCIHRARDNYLPIRRALKQFEKESLDTDVGVSQKKYDKTLEELKKFKAAGNPFSDEEFFHQFQSIHDQQSSLLE  160 (336)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhhccccccccccchhHHHHHHHHHhhhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999876542    24789999999999999999999998 88999999999999999


Q ss_pred             HHHHHHHHHhhhhhchhhhhhhhhHHHHHHHHHHHHHHHHHHHhcCchHHHhhhhhhcCCcCCcccchhHHHHHHHHHHh
Q 040233          188 KLQLRKNKLDKKLKYIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALK  267 (366)
Q Consensus       188 ~L~s~k~kl~~kl~~~r~~k~~~~~~y~~~~~~v~V~~vvvaa~~~~~~~~~l~~~~~~p~~~~~~W~~~~~~l~e~~l~  267 (366)
                      +|+++++|+++|++++|+|+++++++|++++++|+|+++++|||++++.+ |+++++++|++..++|.+++|++|+++++
T Consensus       161 kL~~~k~Kl~kklk~~r~~~kvs~v~fvaa~~aV~i~svv~aa~a~~~vv-~~aa~~a~P~~~~gkw~~~~~~k~~~al~  239 (336)
T PF05055_consen  161 KLDSRKKKLRKKLKLVRTWRKVSNVCFVAAFVAVAIASVVAAAHAVPAVV-ALAAALAAPIGSVGKWCGSLWKKYEEALK  239 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHccchHHHhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988876 58888889999999999999999999999


Q ss_pred             hhHhhhhhhcccchHHHhhhhhHHHHHHHHHHHHHHhhhcccch-hhhh---HHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 040233          268 GQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV-IEEE---AVKIGVEEIKKKLGVFMKNVEDLGVQAD  343 (366)
Q Consensus       268 ~e~~~~~~~~kGt~~llkeldti~~lV~rL~~~ie~~~~~v~f~-~~~e---~v~~~v~eL~k~~~~~~~~Ld~Le~~V~  343 (366)
                      ++.++.++++|||||+++|||||+++|+||+++|||++++|+|| ++++   .++++|+||+|+++.|+++|||||+|||
T Consensus       240 ~~~~~l~~aakGtyI~~~DldTIsrLV~RL~deIE~~~~~v~fave~~~d~~~vk~vv~el~k~~~~f~~qleELeehv~  319 (336)
T PF05055_consen  240 KQKEQLDAAAKGTYILIKDLDTISRLVDRLEDEIEHMKALVDFAVERGEDEEAVKEVVKELKKNVESFTEQLEELEEHVY  319 (336)
T ss_pred             HHHHHHHHHHhccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999 8664   5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 040233          344 TCSRDIRRARTVVLQRI  360 (366)
Q Consensus       344 ~~f~~I~raR~~vL~~I  360 (366)
                      +||++|||||++||++|
T Consensus       320 lC~~tInrAR~lVlq~I  336 (336)
T PF05055_consen  320 LCFKTINRARTLVLQEI  336 (336)
T ss_pred             HHHHHHHHHHHHHHhhC
Confidence            99999999999999997

This family includes AT14A like proteins from Arabidopsis thaliana. At14a contains a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and the protein localises partly to the plasma membrane [].

>PF05633 DUF793: Protein of unknown function (DUF793); InterPro: IPR008511 This entry includes Protein BYPASS 1 which is required for normal root and shoot development

Probab=100.00  E-value=1.2e-64  Score=496.00  Aligned_cols=323  Identities=20%  Similarity=0.279  Sum_probs=274.9

Q ss_pred             CcchhhhhcccchhHhhHHHHHHHHHHHHhhhhccCcCCCccCHhhHHHHHHHHhccCHHHHHHHHhhcc-ccccchhHh
Q 040233           19 ELSSYEAACRLDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKK-DIWKSQELF   97 (366)
Q Consensus        19 ~~~~y~~a~~~~~~L~~F~~~l~~r~~~l~~sL~~~~~~~~lSl~w~~~~~~~lLe~~qe~~~~i~~~~~-~~w~~~~l~   97 (366)
                      +.++.+.+...+++|++||+++++||++|..+..+  .+++|||+||++++++||+||.||+++|++.+. |+ .+|+++
T Consensus        25 ~~~~~~~~~~~~~~L~~Fq~~va~rl~~L~~~~~~--~~~~LSL~W~~~~ld~~l~~~~efr~li~~~~~~~~-s~~~~d  101 (389)
T PF05633_consen   25 SHNHEQEAESLEAELEAFQRHVAERLSDLSPSSKD--SDDFLSLSWMRKALDSFLCCHEEFRALITNLRDLPL-SKPPDD  101 (389)
T ss_pred             CCCcccccccchhhHHHHHHHHHHHHHHhccCcCc--ccccccHHHHHHHHHHHHHHHHHHHHHHhccccccc-CCchHH
Confidence            33444556678899999999999999996643211  268999999999999999999999999999987 76 456799


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhccccccCCcchhHHHHHHHHHhhHhcC-------------
Q 040233           98 ELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNFKAAG-------------  164 (366)
Q Consensus        98 ~Lv~~Yfd~S~kalDiCnaL~~~I~~~r~~~~~l~~al~~l~~~~~~~~~~~~~~al~~L~~f~~~~-------------  164 (366)
                      +||++|||+|+|+||||||++++|+++||||+++++|+|+|+... +.+++|+++|.+.|.++....             
T Consensus       102 k~v~eylD~sVKlLDvCNA~~~gi~~lr~~~~ll~~al~~L~~~~-~~~~~~~rRAr~aL~dl~~~~~~~~~~~~~~~~~  180 (389)
T PF05633_consen  102 KWVDEYLDRSVKLLDVCNAIRDGISQLRQWQLLLQIALHALDSSR-PLGEGQLRRARKALSDLKIAMLDDKDSGSSGGSH  180 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcHHHHHHHHHHHHHHHHHHhcccccCcccccc
Confidence            999999999999999999999999999999999999999998862 268899998888888776210             


Q ss_pred             -C-CCC----------h----HHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhchhhh--------hhhhhHHHHHHHHH
Q 040233          165 -D-PFT----------E----EFFQIFQSVYKQQISMLEKLQLRKNKLDKKLKYIHSW--------RKVSSIIFAATFAT  220 (366)
Q Consensus       165 -n-pf~----------~----~~~~~f~~i~~~~~~ll~~L~s~k~kl~~kl~~~r~~--------k~~~~~~y~~~~~~  220 (366)
                       | .|.          .    ...++|++++    |-+.+.||+.+++|+.+.++..+        ++++.++|+|+++|
T Consensus       181 rnrs~~r~~~~~~~~~~s~~~~~~~~~rsls----~~vsr~wsa~~~Lq~m~~nL~~Pk~~esak~~gL~~A~Y~m~~vt  256 (389)
T PF05633_consen  181 RNRSFGRSNSSGRRSSSSSGSRSAGHFRSLS----WSVSRNWSAARQLQAMGENLVLPKGKESAKGRGLLRAMYGMKSVT  256 (389)
T ss_pred             cccccccccCCCCCCCCccccCCcccchhhh----hhhhhhhhhHHHHHHHHhcCCCCCCccccccchHHHHHHHHHHHH
Confidence             0 000          0    0124677754    67889999999999977665333        48899999999999


Q ss_pred             HHHHHHHHHHhcCchHHHhhhhhhcCC-cCCcccchhHHHHHHHHHHhhhHhhhhhhcccchHHHhhhhhHHHHHHHHHH
Q 040233          221 VLICSVVAAAMAAPPVAAALAAASSIP-LGSMGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEI  299 (366)
Q Consensus       221 v~V~~vvvaa~~~~~~~~~l~~~~~~p-~~~~~~W~~~~~~l~e~~l~~e~~~~~~~~kGt~~llkeldti~~lV~rL~~  299 (366)
                      |||||++|||+||+++  |+..  +++ +|.++.|++++..+|++ |++|  ++++..||++++++||+.|+++|++|++
T Consensus       257 vFV~~vlVAA~pc~~r--gL~~--~l~~vP~~~~WA~s~~~LQ~r-I~eE--ikkk~~kgs~gLLkEl~~ve~~vr~L~e  329 (389)
T PF05633_consen  257 VFVCWVLVAAFPCQDR--GLQV--HLSAVPRQFSWAPSFISLQER-INEE--IKKKERKGSCGLLKELQQVEASVRELHE  329 (389)
T ss_pred             HHHHHHHHHeeecCCc--cccC--CCCCCccccccchHHHHHHHH-HHHH--HhhccccCcchHHHHHHHHHHHHHHHHH
Confidence            9999999999999998  6543  467 78899999999999988 9998  5567889999999999999999999999


Q ss_pred             HHHHhhhcccch-hhh--hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 040233          300 EVEALLQNVDFV-IEE--EAVKIGVEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQRI  360 (366)
Q Consensus       300 ~ie~~~~~v~f~-~~~--e~v~~~v~eL~k~~~~~~~~Ld~Le~~V~~~f~~I~raR~~vL~~I  360 (366)
                      .|+    .++|+ +++  +++++.|+||++.|+.|++||||||+||+++||+|+++|+++|+.|
T Consensus       330 l~d----~~~~p~~~e~~~ev~~~V~EL~~~~~~L~~GLdpLerqVre~Fh~IV~sR~elLd~l  389 (389)
T PF05633_consen  330 LID----SFQFPLEEEKEEEVREAVEELARVCEALSQGLDPLERQVREVFHRIVRSRTELLDSL  389 (389)
T ss_pred             HHH----hccCCcchhHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhHHHHhcC
Confidence            997    67888 533  5799999999999999999999999999999999999999999864

Prevents constitutive production of a root mobile carotenoid-derived signaling compound that is capable of arresting shoot and leaf development [, ].

>PF03087 DUF241: Arabidopsis protein of unknown function; InterPro: IPR004320 This family represents plant proteins of unknown function

Probab=98.38  E-value=0.00035  Score=65.72  Aligned_cols=41  Identities=27%  Similarity=0.413  Sum_probs=38.4

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHHHHhHhHHHHHHHhh
Q 040233           97 FELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQ  137 (366)
Q Consensus        97 ~~Lv~~Yfd~S~kalDiCnaL~~~I~~~r~~~~~l~~al~~  137 (366)
                      ..|+++.+|.|+.++|+|++.++.+-+++....=+|.+|..
T Consensus        31 ~k~ve~lLd~sL~LLD~c~~~rd~ll~lKe~v~eLqsalRR   71 (231)
T PF03087_consen   31 EKWVEELLDGSLRLLDACGTFRDALLQLKEHVQELQSALRR   71 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            45999999999999999999999999999999999999963

>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family

Probab=91.93  E-value=2.6  Score=37.41  Aligned_cols=100  Identities=18%  Similarity=0.194  Sum_probs=61.6

Q ss_pred             cccchhHHHHHHHHHHhhhHhhhhhhcccchHHHhhhhhHHHHHHHH---HHHHHHhhhcccch-hhh------hHHHHH
Q 040233          251 MGKWIDSLWKNYEHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRL---EIEVEALLQNVDFV-IEE------EAVKIG  320 (366)
Q Consensus       251 ~~~W~~~~~~l~e~~l~~e~~~~~~~~kGt~~llkeldti~~lV~rL---~~~ie~~~~~v~f~-~~~------e~v~~~  320 (366)
                      -|.|-.-+.+.|+.+|..-+.+++.-.++.     +.-|++..+.=|   .....+..   .+. +++      ..++.-
T Consensus        48 GFRWNs~VRkqY~~~i~~AKkqRk~~~~~~-----~~ltl~~vI~fLq~l~~~~~~~~---~~~~e~~~l~~e~~~l~~~  119 (161)
T TIGR02894        48 GFRWNAYVRKQYEEAIELAKKQRKELKREA-----GSLTLQDVISFLQNLKTTNPSDQ---ALQKENERLKNQNESLQKR  119 (161)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccccCc-----ccCCHHHHHHHHHHHHhcchhHH---HHHHHHHHHHHHHHHHHHH
Confidence            379988888889887765444433222211     222333333333   32211111   111 111      247778


Q ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 040233          321 VEEIKKKLGVFMKNVEDLGVQADTCSRDIRRARTVVLQ  358 (366)
Q Consensus       321 v~eL~k~~~~~~~~Ld~Le~~V~~~f~~I~raR~~vL~  358 (366)
                      +++|.+..+.+.+.+..+++.-..++..++|+|.+++.
T Consensus       120 ~e~Le~e~~~L~~~~~~~~eDY~~L~~Im~RARkl~~~  157 (161)
T TIGR02894       120 NEELEKELEKLRQRLSTIEEDYQTLIDIMDRARKLAVV  157 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            88888888888888888899999999999999998763

In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.

>KOG4191 consensus Histone acetyltransferases PCAF/SAGA/ADA, subunit TADA3L/NGG1 [Chromatin structure and dynamics]

Probab=81.27  E-value=9.2  Score=39.20  Aligned_cols=88  Identities=18%  Similarity=0.144  Sum_probs=57.1

Q ss_pred             HHHHhhhHhhhhhhcccchHHHhhhhhHHHHHHHHHHHHHHhhhcccch-hhhhHHHHHH-HHHHHHHHHHhhhhhhHHH
Q 040233          263 EHALKGQKEMISSMQVGTYIAIKDLDNIRVLIDRLEIEVEALLQNVDFV-IEEEAVKIGV-EEIKKKLGVFMKNVEDLGV  340 (366)
Q Consensus       263 e~~l~~e~~~~~~~~kGt~~llkeldti~~lV~rL~~~ie~~~~~v~f~-~~~e~v~~~v-~eL~k~~~~~~~~Ld~Le~  340 (366)
                      |.+|++++...-...-+-+..-.|-|.|..-.++|..++.   ..-++- ++...+..++ +|++  -..|++-||.|.+
T Consensus       379 E~RLK~eL~~~Gll~ded~pasdddDEvlaeLR~lqaeLk---~vS~~N~k~k~~Ll~la~eE~a--~qe~~q~lddlDk  453 (516)
T KOG4191|consen  379 ESRLKEELIAQGLLEDEDRPASDDDDEVLAELRKLQAELK---AVSAHNRKKKHDLLRLAPEEMA--RQEFQQVLDDLDK  453 (516)
T ss_pred             HHHHHHHHHHhccccccCCCcccchHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHhhHHHHH--HHHHHHHHHHHHH
Confidence            3446655422112223445566778999999999999985   223343 2223444333 3333  3568999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 040233          341 QADTCSRDIRRARTV  355 (366)
Q Consensus       341 ~V~~~f~~I~raR~~  355 (366)
                      ||..||..++|+|.-
T Consensus       454 qI~qaYvKr~r~~kk  468 (516)
T KOG4191|consen  454 QIEQAYVKRNRSRKK  468 (516)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999853

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=80.91  E-value=41  Score=30.07  Aligned_cols=22  Identities=36%  Similarity=0.517  Sum_probs=14.0

Q ss_pred             HHhhhhhHHHHHHHHHHHHHHh
Q 040233          283 AIKDLDNIRVLIDRLEIEVEAL  304 (366)
Q Consensus       283 llkeldti~~lV~rL~~~ie~~  304 (366)
                      +-+|+++++.....+...++..
T Consensus        93 l~~el~~l~~~~~~~~~~l~~~  114 (191)
T PF04156_consen   93 LQEELDQLQERIQELESELEKL  114 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4466777777666666666544

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 7e-10
 Identities = 49/365 (13%), Positives = 115/365 (31%), Gaps = 92/365 (25%)

Query: 29  LDTDLQTFDTSLQARTSHVINTLAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKK 88
           +D +        +   S   +      + + +  D  K +      +++E +  I+  K 
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSI------LSKEEIDHIIMSKD 59

Query: 89  DIWKSQELFELVEEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGH 148
            +  +  LF  +    E  +Q   F   +E+ L+   + + L    +   + E    +  
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQ--KF---VEEVLR--INYKFL----MSPIKTEQRQPSMM 108

Query: 149 R--YVRTLEELKNFKAAGDPFT-------EEFFQIFQSVYKQQI--------------SM 185
              Y+   + L N       F        + + ++ Q++ + +               + 
Sbjct: 109 TRMYIEQRDRLYN---DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 186 LEKLQLRKNKLDKKLKY-IHSWRKVSSIIFAATFATVL--ICSVVAAAMAAPPVAAALAA 242
           +        K+  K+ + I  W  + +     T   +L  +   +      P   +    
Sbjct: 166 VALDVCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLLYQI-----DPNWTSRSDH 219

Query: 243 ASSIPLG--SMGKWIDSLW--KNYEHALKGQKEMISSMQVGTYIAIKDLDNIR--VLIDR 296
           +S+I L   S+   +  L   K YE+ L     ++             L N++     + 
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCL-----LV-------------LLNVQNAKAWNA 261

Query: 297 LEIEVEALL-----QNVDFVIEEEAVKIGVEEIKK------KLGVFMK----NVEDLGVQ 341
             +  + LL     Q  DF+       I ++             + +K      +DL  +
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 342 ADTCS 346
             T +
Sbjct: 322 VLTTN 326

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 1e-08
 Identities = 40/340 (11%), Positives = 81/340 (23%), Gaps = 131/340 (38%)

Query: 1   MGGNMSKKTS---ETSSQFTTELSSYE-------AACRLDTD----LQT----FDTSLQA 42
           + G  S KT    +    +  +              C         LQ      D +  +
Sbjct: 158 VLG--SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 43  RTSHVINT--LAAGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKSQELFELV 100
           R+ H  N       ++         K    CLL         +L    ++  ++      
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---------VLL---NVQNAKAW---- 259

Query: 101 EEYFESSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEENDMGAGHRYVRTLEELKNF 160
              F  S + L   T         R  Q+            + + A      +L+     
Sbjct: 260 -NAFNLSCKIL-LTT---------RFKQVT-----------DFLSAATTTHISLDHHS-- 295

Query: 161 KAAGDPFTEEFFQIFQSVYKQQISMLEK-LQLRKNKLDKKLKYIHSWRKVSSIIFAATFA 219
                  T +          +  S+L K L  R   L +++   +               
Sbjct: 296 ----MTLTPD----------EVKSLLLKYLDCRPQDLPREVLTTNP-------------- 327

Query: 220 TVLICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSLWKNYEHALKGQKEMISSMQVG 279
                S++A ++                         + W N++H    +   I      
Sbjct: 328 --RRLSIIAESIRDGL---------------------ATWDNWKHVNCDKLTTIIES--- 361

Query: 280 TYIAIKDLDNIRVLIDRLEIEVEALLQNVDFVIEEEAVKI 319
              ++  L+           E   +       +   +  I
Sbjct: 362 ---SLNVLE---------PAEYRKMFD--RLSVFPPSAHI 387

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 9e-04
 Identities = 13/61 (21%), Positives = 17/61 (27%), Gaps = 33/61 (54%)

Query: 187 EKLQLRKNKLDKKLK-YIHSWRKVSSIIFAATFATVLICSVVAAAMAAPPVAAALAAASS 245
           EK  L+  KL   LK Y                              A   A ALA  ++
Sbjct: 18  EKQALK--KLQASLKLY------------------------------ADDSAPALAIKAT 45

Query: 246 I 246
           +
Sbjct: 46  M 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00