Citrus Sinensis ID: 040305

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80
Protein Sequence
MFFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFLLFFIVETVLF
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHcHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHccccHHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mffnsedfdvqpwrsvhpseEALKRWRSACAIVKNRRRRFCMVTNLanhaeardhKLKIQVLFYSLLSFLLFFIVETVLF
Flexible Loop (DISEMBL)
mffnsedfdvqpwrsvhpseealkrWRSACAIVKNRRRRFCMVTNLanhaeardhkLKIQVLFYSLLSFLLFFIVETVLF
Low Complexity Region (SEG)
MFFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVlfysllsfllffIVETVLF
Disordered region (IsUnstruct)
*********************ALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFLLFFIVETVL*
Disordered Region (DISOPRED)
*****EDFDV**************RWRSACAIVKNRRRRFCMVTNL**************VLFYSLLSFLLFFIVETVLF
Disordered Region (DISEMBL)
MFFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFLLFFIVETVLF
Disordered Region (DISPRO)
*****EDFDVQPWR*VHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFLLFFIVETVLF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFLLFFIVETVLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	80	2.2.26 [Sep-21-2011]
Q9M2L4	1025	Putative calcium-transpor	yes	no	0.7	0.054	0.460	4e-07
O81108	1014	Calcium-transporting ATPa	no	no	0.687	0.054	0.421	9e-07
O64806	1015	Putative calcium-transpor	no	no	0.712	0.056	0.417	2e-06
Q2QY12	1039	Probable calcium-transpor	yes	no	0.8	0.061	0.444	2e-06
Q8RUN1	1043	Calcium-transporting ATPa	no	no	0.55	0.042	0.533	2e-06
Q2RAS0	1017	Probable calcium-transpor	yes	no	0.8	0.062	0.444	6e-06
Q37145	1020	Calcium-transporting ATPa	no	no	0.725	0.056	0.402	1e-05
Q2QMX9	1020	Calcium-transporting ATPa	no	no	0.612	0.048	0.418	2e-05
O22218	1030	Calcium-transporting ATPa	no	no	0.637	0.049	0.444	4e-05

>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ----V 61
          +DF+V    S +PS EA +RWRS+  +VKNR RRF M++NL   AE    + +IQ    V
Sbjct: 6  KDFEVA---SKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRV 62

Query: 62 LFY 64
          +FY
Sbjct: 63 VFY 65

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8

>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 9/64 (14%)

Query: 5  SEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA------RDHKLK 58
          +E+FDV   ++ H SEE L++WR+ C +VKN +RRF    NL+   EA         KL+
Sbjct: 6  NENFDV---KAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLR 62

Query: 59 IQVL 62
          I VL
Sbjct: 63 IAVL 66

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 10/67 (14%)

Query: 2  FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA------RDH 55
          + NS +FDV   ++ H SEE L++WR+ C++VKN +RRF    NL+   EA         
Sbjct: 4  YLNS-NFDV---KAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 56 KLKIQVL 62
          KL+I VL
Sbjct: 60 KLRIAVL 66

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 8/72 (11%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACA-IVKNRRRRFCMVTNLA----NHAEARDHKLKIQ 60
          E+FDV    + +PSEEA +RWR A   IVKNRRRRF  V +L     + A+ R  + KI+
Sbjct: 10 ENFDVP---AKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQEKIR 66

Query: 61 VLFYSLLSFLLF 72
          V  Y   + L+F
Sbjct: 67 VALYVQQAALIF 78

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 17 HPSEEALKRWRSACA-IVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          +PSEEA +RWR A   +VKNRRRRF MV +L   ++A   + KIQ
Sbjct: 21 NPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQ 65

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACA-IVKNRRRRFCMVTNL----ANHAEARDHKLKIQ 60
          E FDV    + +PSEEA +RWR A   IVKNRRRRF  V +L     + A+ R  + KI+
Sbjct: 10 EHFDVP---AKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQEKIR 66

Query: 61 VLFYSLLSFLLF 72
          V  Y   + L+F
Sbjct: 67 VALYVQQAALIF 78

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 2  FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEAR------DH 55
          + N    DV+P  S   S+EAL+RWR  C IVKN +RRF    NL+  +EA         
Sbjct: 4  YLNENFGDVKPKNS---SDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60

Query: 56 KLKIQVL 62
          K ++ VL
Sbjct: 61 KFRVAVL 67

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 6/55 (10%)

Query: 14 RSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEAR------DHKLKIQVL 62
          ++ + SEEAL+RWR  C +VKN +RRF    NL    EA+        KL++ VL
Sbjct: 13 KAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVL 67

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 7  DFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          DF+V+   + +PS EA +RWRS+ +IVKNR RRF  + +L   A+  + K +IQ
Sbjct: 7  DFEVE---AKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQ 57


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.333    0.139    0.442 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,036,797
Number of Sequences: 539616
Number of extensions: 740569
Number of successful extensions: 2969
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2955
Number of HSP's gapped (non-prelim): 10
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
255565544	1037	cation-transporting atpase plant, putati	0.65	0.050	0.6	1e-09
225441902	1032	PREDICTED: calcium-transporting ATPase 4	0.65	0.050	0.636	1e-09
225441900	1033	PREDICTED: calcium-transporting ATPase 4	0.65	0.050	0.636	1e-09
356542922	1038	PREDICTED: putative calcium-transporting	0.65	0.050	0.563	1e-08
356531623	1041	PREDICTED: putative calcium-transporting	0.65	0.049	0.563	1e-08
296085120	969	unnamed protein product [Vitis vinifera]	0.65	0.053	0.545	3e-08
225449943	1047	PREDICTED: putative calcium-transporting	0.65	0.049	0.545	3e-08
225449945	1036	PREDICTED: putative calcium-transporting	0.65	0.050	0.545	3e-08
449507923	1039	PREDICTED: LOW QUALITY PROTEIN: calcium-	0.65	0.050	0.527	7e-07
317106700	886	JHL06B08.1 [Jatropha curcas]	0.65	0.058	0.553	8e-07

>gi|255565544|ref|XP_002523762.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223536974|gb|EEF38611.1| cation-transporting atpase plant, putative [Ricinus communis]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+FDV+  R   PSEEAL+RWRSA +IVKN RRRF MV +LA  AEA   ++K+Q
Sbjct: 7  ENFDVEGKR---PSEEALRRWRSAVSIVKNPRRRFRMVADLAKRAEAERKRVKLQ 58

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441902|ref|XP_002284422.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type isoform 2 [Vitis vinifera]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          +DFDVQ   S H SE AL+RWRSA  IVKNRRRRF  V NL   +EA   KLKIQ
Sbjct: 6  KDFDVQ---SKHSSEAALRRWRSAVTIVKNRRRRFRDVANLHMRSEAEKKKLKIQ 57

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441900|ref|XP_002284417.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type isoform 1 [Vitis vinifera] gi|297739623|emb|CBI29805.3| unnamed protein product [Vitis vinifera]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          +DFDVQ   S H SE AL+RWRSA  IVKNRRRRF  V NL   +EA   KLKIQ
Sbjct: 7  KDFDVQ---SKHSSEAALRRWRSAVTIVKNRRRRFRDVANLHMRSEAEKKKLKIQ 58

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542922|ref|XP_003539913.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+F VQP    +PSE+AL RWRSA ++VKN RRRF MV NLA  A+A   + K+Q
Sbjct: 7  ENFSVQP---KNPSEDALLRWRSAVSVVKNPRRRFRMVANLAQRADAEQKRKKLQ 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531623|ref|XP_003534376.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+F VQP    +PSE AL RWRSA ++VKN RRRF MV NLA  A+A   + K+Q
Sbjct: 7  ENFSVQP---KNPSEAALLRWRSAVSVVKNPRRRFRMVANLAQRADAEQKRTKLQ 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085120|emb|CBI28615.3| unnamed protein product [Vitis vinifera]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+FDV+P R+   SEEA +RWRSA ++VKN RRRF MV +LA  +E    + KIQ
Sbjct: 7  ENFDVEPKRA---SEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQ 58

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449943|ref|XP_002270771.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 2 [Vitis vinifera]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+FDV+P R+   SEEA +RWRSA ++VKN RRRF MV +LA  +E    + KIQ
Sbjct: 7  ENFDVEPKRA---SEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQ 58

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449945|ref|XP_002270669.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 1 [Vitis vinifera]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          E+FDV+P R+   SEEA +RWRSA ++VKN RRRF MV +LA  +E    + KIQ
Sbjct: 7  ENFDVEPKRA---SEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQ 58

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507923|ref|XP_004163168.1| PREDICTED: LOW QUALITY PROTEIN: calcium-transporting ATPase 4, plasma membrane-type-like [Cucumis sativus]

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          ++FD+    S  PSEEA  RWRSA +IVKNRRRRF MV +L   A+A + + K+Q
Sbjct: 11 KNFDLD---SKSPSEEAQMRWRSAVSIVKNRRRRFRMVADLEKRAKAGEKRRKLQ 62

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106700|dbj|BAJ53200.1| JHL06B08.1 [Jatropha curcas]

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSAC-AIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
          +DF+V+   + +PSEEAL+RWR A  AIVKN RRRF MV +LA  +EA   K  IQ
Sbjct: 6  KDFEVE---NKNPSEEALRRWRKAVGAIVKNPRRRFRMVADLAKRSEAEKKKRSIQ 58

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
TAIR|locus:2120096	1014	ACA2 "calcium ATPase 2" [Arabi	0.562	0.044	0.458	2e-05
TAIR|locus:2082528	1025	ACA11 "autoinhibited Ca2+-ATPa	0.65	0.050	0.472	2e-05
TAIR|locus:2059201	1015	ACA7 "auto-regulated Ca2+-ATPa	0.587	0.046	0.450	2.6e-05
TAIR|locus:2029794	1020	ACA1 "autoinhibited Ca2+-ATPas	0.562	0.044	0.510	5.4e-05
TAIR|locus:2062673	1030	ACA4 ""autoinhibited Ca(2+)-AT	0.637	0.049	0.444	0.00039

TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query:     5 SEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA 52
             +E+FDV   ++ H SEE L++WR+ C +VKN +RRF    NL+   EA
Sbjct:     6 NENFDV---KAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEA 50

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0006810 "transport" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006820 "anion transport" evidence=RCA

GO:0006862 "nucleotide transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015696 "ammonium transport" evidence=RCA

GO:0015802 "basic amino acid transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0043269 "regulation of ion transport" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0015085 "calcium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query:     6 EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
             +DF+V    S +PS EA +RWRS+  +VKNR RRF M++NL   AE    + +IQ
Sbjct:     6 KDFEVA---SKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQ 57

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0043069 "negative regulation of programmed cell death" evidence=IGI

GO:0055081 "anion homeostasis" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query:     2 FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA 52
             + NS +FDV   ++ H SEE L++WR+ C++VKN +RRF    NL+   EA
Sbjct:     4 YLNS-NFDV---KAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEA 50

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query:     5 SEDF-DVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA 52
             +E+F DV+P  S   S+EAL+RWR  C IVKN +RRF    NL+  +EA
Sbjct:     6 NENFGDVKPKNS---SDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEA 51

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0009706 "chloroplast inner membrane" evidence=IDA;TAS

GO:0005262 "calcium channel activity" evidence=TAS

TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
 Identities = 24/54 (44%), Positives = 36/54 (66%)

Query:     7 DFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
             DF+V+   + +PS EA +RWRS+ +IVKNR RRF  + +L   A+  + K +IQ
Sbjct:     7 DFEVE---AKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQ 57


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.134   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        68   0.00091  102 3  11 22  0.36    28
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  539 (57 KB)
  Total size of DFA:  103 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.14u 0.09s 7.23t   Elapsed:  00:00:01
  Total cpu time:  7.14u 0.09s 7.23t   Elapsed:  00:00:01
  Start:  Fri May 10 13:15:23 2013   End:  Fri May 10 13:15:24 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0009651 "response to salt stress" evidence=IGI

GO:0005773 "vacuole" evidence=IDA;TAS

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0043069 "negative regulation of programmed cell death" evidence=IGI

GO:0055081 "anion homeostasis" evidence=IMP

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	80
pfam12515	47	pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi	3e-10

>gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain

 Score = 50.1 bits (120), Expect = 3e-10
 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 6  EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA 52
          + FD+      + SEEAL+RWR A  +VKN RRRF    +LA   EA
Sbjct: 4  DPFDIPA---KNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47

This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	80
PF12515	47	CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d	99.85
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	97.85
PF04081	124	DNA_pol_delta_4: DNA polymerase delta, subunit 4 ;	82.45

>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []

Probab=99.85  E-value=4.3e-22  Score=117.84  Aligned_cols=46  Identities=43%  Similarity=0.779  Sum_probs=43.8

Q ss_pred             CCCCCccCCCCCCCCCCHHHHHHHHHhhhhhhhccccccccccccchhh
Q 040305            3 FNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAE   51 (80)
Q Consensus         3 ~~~~~Fdv~~k~~~~~s~ealrRWR~A~~lViN~~RRFr~~adL~k~~~   51 (80)
                      |+.++|||++||   +|+|+|+|||+|++||+|++|||||++||+|+++
T Consensus         1 yl~~~Fdi~~Kn---~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e   46 (47)
T PF12515_consen    1 YLDDNFDIPAKN---SSEEALRRWRQAVGLVKNARRRFRYTADLKKREE   46 (47)
T ss_pred             CCccccCCCCCC---CCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence            688999999999   9999999999998899999999999999999875

This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.85  E-value=1e-05  Score=70.40  Aligned_cols=60  Identities=32%  Similarity=0.334  Sum_probs=51.0

Q ss_pred             CCCCCCccCCCCCCCCCCHHHHHHHHHhhhhhhhccccccccccccchhhHHHhHHHHHHhhhhhhhh
Q 040305            2 FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSF   69 (80)
Q Consensus         2 ~~~~~~Fdv~~k~~~~~s~ealrRWR~A~~lViN~~RRFr~~adL~k~~~~~~~rr~i~~kir~~~~~   69 (80)
                      +++.++|..+.+|   ++.+++++||.| ++++|++|||+|.++|++..+...+|+    |+|++.++
T Consensus         1 s~~~~~~~~~~~n---~~~~~~~~~~~a-~~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~   60 (1034)
T KOG0204|consen    1 SLLDKDFVVSMKN---SSIEALQRWRLA-YIVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLV   60 (1034)
T ss_pred             CCccccccccccc---chhhhhhhhhhh-hhhcccchhhccccCHHHHHHHHHHHh----hhhhhhcc
Confidence            4567888777888   999999999977 799999999999999999999888888    55555444

>PF04081 DNA_pol_delta_4: DNA polymerase delta, subunit 4 ; InterPro: IPR007218 DNA polymerase is responsible for effective DNA replication

Probab=82.45  E-value=1.1  Score=31.21  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=25.9

Q ss_pred             CCccCCCCCCCCCCHHHHHHHHHhhhhhhhcccccc
Q 040305            6 EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFC   41 (80)
Q Consensus         6 ~~Fdv~~k~~~~~s~ealrRWR~A~~lViN~~RRFr   41 (80)
                      ..||+.++.+.-.-..+++||.+|..+.+||.=-.+
T Consensus        69 r~FDl~~~yGPC~GitRl~RW~RA~~lgL~PP~ev~  104 (124)
T PF04081_consen   69 RQFDLSSQYGPCIGITRLERWERAKRLGLNPPIEVL  104 (124)
T ss_pred             HHhccccccCCccCchHHHHHHHHHHcCCCCCHHHH
Confidence            349998876422234589999999879998876554

The function of the delta subunit 4 of DNA polymerase is not yet known.; GO: 0006260 DNA replication, 0005634 nucleus

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	80
4aqr_D	57	Calcium-transporting ATPase 8, plasma membrane-TY;	99.75
2l1w_B	26	Vacuolar calcium ATPase BCA1 peptide; calmodulin,	98.92

>4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana}

Probab=99.75  E-value=3.5e-19  Score=108.16  Aligned_cols=48  Identities=35%  Similarity=0.483  Sum_probs=42.1

Q ss_pred             CCHHHHHHHHHhhhhhhhccccccccccccchhhHHHhHHHHHHhhhhhhhhH
Q 040305           18 PSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQVLFYSLLSFL   70 (80)
Q Consensus        18 ~s~ealrRWR~A~~lViN~~RRFr~~adL~k~~~~~~~rr~i~~kir~~~~~~   70 (80)
                      +|+|+|+|||+| +||+||+||||||+||+|+++++.+++    ||+++.+|+
T Consensus         1 ~s~e~L~rWR~a-~lVlNa~RRFR~t~dL~K~~e~~~~~r----kiR~~~~v~   48 (57)
T 4aqr_D            1 SSIERLQQWRKA-ALVLNASRRFRYTLDLKKEQETREMRQ----KIRSHAHAL   48 (57)
T ss_dssp             CHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
T ss_pred             CcHHHHHHHHHH-HHHhchHhhhhhhcchhhHHHHHHHHH----HHHHHHHHH
Confidence            478999999999 599999999999999999999999988    566666655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00