Citrus Sinensis ID: 040357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQITGSQQGS
Secondary Structure (PSIPRED)
ccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
maehyqplqqtqlqsrqprshQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYvtgghppgadQLEQARMKLAGKAREMRDRAEQFgqqqitgsqqgs
Flexible Loop (DISEMBL)
maehyqplqqtqlqsrqprSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGghppgadqlEQARMKLAGKAREMRDRAEqfgqqqitgsqqgs
Low Complexity Region (SEG)
MAEHYqplqqtqlqsrqprsHQvvkaatavtaGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEqfgqqqitgsqqgS
Disordered region (IsUnstruct)
***********************VKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGG*****************************************
Disordered Region (DISOPRED)
*************************AATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRY*********************************************
Disordered Region (DISEMBL)
**************************ATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA*************************
Disordered Region (DISPRO)
*****************PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQITGS****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGxxxxxxxxxxxxxxxxxxxxxAEQFGQQQITGSQQGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q43804	148	Oleosin 1 OS=Prunus dulci	N/A	no	0.986	0.959	0.743	3e-41
P29111	175	Major oleosin NAP-II (Fra	N/A	no	0.861	0.708	0.685	2e-40
P29525	173	Oleosin 18.5 kDa OS=Arabi	yes	no	0.986	0.820	0.612	1e-39
Q43284	141	Oleosin 14.9 kDa OS=Arabi	no	no	0.875	0.893	0.589	3e-39
P29110	195	Oleosin Bn-III OS=Brassic	N/A	no	0.861	0.635	0.669	4e-39
P29109	183	Oleosin Bn-V (Fragment) O	N/A	no	0.847	0.666	0.666	6e-37
Q42980	148	Oleosin 16 kDa OS=Oryza s	yes	no	0.819	0.797	0.601	2e-33
Q96543	167	Oleosin 16 kDa OS=Bromus	N/A	no	0.826	0.712	0.630	8e-33
P13436	156	Oleosin Zm-I OS=Zea mays	N/A	no	0.687	0.634	0.646	2e-30
Q9SS98	183	Oleosin 5 OS=Arabidopsis	no	no	0.798	0.628	0.428	2e-19

>sp|Q43804|OLEO1_PRUDU Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/144 (74%), Positives = 123/144 (85%), Gaps = 2/144 (1%)

Query: 3   EHYQ-PLQ-QTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           +H+Q PL  Q     +QPRS+QV KAATAVTAGGSLLVLSGL +AGTVIALTIATPLLVI
Sbjct: 4   QHFQQPLHFQGSYGQQQPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVI 63

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLAG
Sbjct: 64  FSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAG 123

Query: 121 KAREMRDRAEQFGQQQITGSQQGS 144
           KAR+++DRAEQFGQQ +   QQ S
Sbjct: 124 KARDIKDRAEQFGQQHVPSGQQQS 147

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.
Prunus dulcis (taxid: 3755)

>sp|P29111|OLEO2_BRANA Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1

 Score =  164 bits (415), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 104/124 (83%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
           +S Q+ KA TAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI G
Sbjct: 41  KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITG 100

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQIT 138
           FL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL GK ++M+DRA+ +GQQQ  
Sbjct: 101 FLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYYGQQQTG 160

Query: 139 GSQQ 142
           G   
Sbjct: 161 GEDD 164

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|P29525|OLEO1_ARATH Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/142 (61%), Positives = 108/142 (76%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           M       Q +   S   +S Q+ KAATAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI
Sbjct: 21  MGRDRDQYQMSGRGSDYSKSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVI 80

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  
Sbjct: 81  FSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGS 140

Query: 121 KAREMRDRAEQFGQQQITGSQQ 142
           KA++++DRA+ +GQQ   G   
Sbjct: 141 KAQDLKDRAQYYGQQHTGGEHD 162

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q43284|OLEO3_ARATH Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/134 (58%), Positives = 105/134 (78%), Gaps = 8/134 (5%)

Query: 4   HYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSP 63
           H++ + +   Q   P++ Q+VKAATAVTAGGSLLVLSGLT+AGTVIALT+ATPLLVI SP
Sbjct: 8   HHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSP 67

Query: 64  VLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAR 123
           VLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+  + +
Sbjct: 68  VLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTG---SGSDKIENARMKVGSRVQ 124

Query: 124 EMRDRAEQFGQQQI 137
           + +     +GQ  I
Sbjct: 125 DTK-----YGQHNI 133

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

>sp|P29110|OLEO3_BRANA Oleosin Bn-III OS=Brassica napus PE=2 SV=1

 Score =  159 bits (403), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 104/124 (83%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
           +S Q+ KA TAVTAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI G
Sbjct: 53  KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITG 112

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQIT 138
           FL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+ +GQQ   
Sbjct: 113 FLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYGQQHTG 172

Query: 139 GSQQ 142
           G  Q
Sbjct: 173 GYGQ 176

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|P29109|OLEO5_BRANA Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1

 Score =  152 bits (384), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 101/123 (82%), Gaps = 1/123 (0%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
           +S Q+ KA TAVTAG SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI G
Sbjct: 41  KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITG 100

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQIT 138
           FL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++M+DRA  +GQQ  T
Sbjct: 101 FLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRAYYYGQQH-T 159

Query: 139 GSQ 141
           G +
Sbjct: 160 GEE 162

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|Q42980|OLEO1_ORYSJ Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 93/118 (78%)

Query: 14  QSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVS 73
           Q +Q      +K  TA TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++
Sbjct: 23  QEKQRFMMTALKTVTAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALA 82

Query: 74  LLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQ 131
           L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LA KAR++++ A+ 
Sbjct: 83  LMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQH 140

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q96543|OLE16_BROSE Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1

 Score =  139 bits (349), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 97/119 (81%)

Query: 12  QLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVIT 71
           Q Q +QP     +KAATA TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+
Sbjct: 40  QHQQKQPVMMCALKAATAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIS 99

Query: 72  VSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 130
           ++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LA KAR+++D A+
Sbjct: 100 MALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Bromus secalinus (taxid: 4502)

>sp|P13436|OLEO1_MAIZE Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 83/99 (83%)

Query: 33  GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISV 92
           GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV
Sbjct: 50  GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSV 109

Query: 93  LSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQ 131
            SW+Y+Y+TG HPP ADQL+ A+ +LA KAR+++D A+ 
Sbjct: 110 FSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQH 148

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Zea mays (taxid: 4577)

>sp|Q9SS98|OLEO5_ARATH Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 4/119 (3%)

Query: 18  PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIM 77
           P S QV+     V  GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + 
Sbjct: 32  PSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMT 91

Query: 78  GFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQ 134
           GFLASG  G+  +S +SW+  Y+   G H P  ++LE+A+ +LA  A  +  R +  GQ
Sbjct: 92  GFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTKDAGQ 148

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
683553	144	oleosin-like protein [Citrus sinensis] g	1.0	1.0	1.0	2e-75
399105973	137	14.3 kDa oleosin [Jatropha curcas]	0.944	0.992	0.815	3e-55
5381321	145	15 kDa oleosin [Sesamum indicum] gi|1982	0.972	0.965	0.791	2e-53
198250343	145	main allergen 15 kDa oleosin [Sesamum in	0.979	0.972	0.783	2e-53
148283923	153	oleosin L-isoform [Ficus pumila var. awk	0.888	0.836	0.820	8e-53
166831525	137	oleosin 3 [Jatropha curcas]	0.944	0.992	0.780	1e-52
29170509	140	oleosin [Corylus avellana]	0.958	0.985	0.808	1e-51
95925793	140	OleIII [Camellia oleifera]	0.847	0.871	0.836	3e-51
224053683	134	predicted protein [Populus trichocarpa]	0.930	1.0	0.760	2e-50
357378944	139	oleosin [Juglans regia]	0.958	0.992	0.758	4e-49

>gi|683553|emb|CAA88360.1| oleosin-like protein [Citrus sinensis] gi|1582679|prf||2119230A oleosin homolog

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI
Sbjct: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
           CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG
Sbjct: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120

Query: 121 KAREMRDRAEQFGQQQITGSQQGS 144
           KAREMRDRAEQFGQQQITGSQQGS
Sbjct: 121 KAREMRDRAEQFGQQQITGSQQGS 144

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399105973|gb|AFP19885.1| 14.3 kDa oleosin [Jatropha curcas]

 Score =  219 bits (558), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/141 (81%), Positives = 125/141 (88%), Gaps = 5/141 (3%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH     Q+Q   +QPRSHQVVKAATAVTAGGSLLVLSGLT+AGTVIALT+ATPLLVI
Sbjct: 1   MAEH----PQSQHVGQQPRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVI 56

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPVLVPAVITV L+I GFLASGGFGVAAISVLSWIYRYVTG HPPGA+ L+QAR+KLAG
Sbjct: 57  FSPVLVPAVITVCLIITGFLASGGFGVAAISVLSWIYRYVTGKHPPGAESLDQARLKLAG 116

Query: 121 KAREMRDRAEQFGQQQITGSQ 141
           KAREM+DRAEQFG Q +TG Q
Sbjct: 117 KAREMKDRAEQFG-QHVTGQQ 136

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5381321|gb|AAD42942.1|AF091840_1 15 kDa oleosin [Sesamum indicum] gi|198250341|gb|ACH85187.1| main allergen 15 kDa oleosin [Sesamum indicum]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 124/144 (86%), Gaps = 4/144 (2%)

Query: 1   MAEHYQPLQQTQ---LQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPL 57
           MAEHY   QQT+   LQ  QPR+ +VVKAATAVTAGGSLLVLSGLT+AGTVIALTIATPL
Sbjct: 1   MAEHYGQQQQTRAPHLQ-LQPRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPL 59

Query: 58  LVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMK 117
           LVI SPVLVPAVIT+ LL  GFLASGGFGVAA+SVLSWIYRY+TG HPPGADQLE A+ K
Sbjct: 60  LVIFSPVLVPAVITIFLLGAGFLASGGFGVAALSVLSWIYRYLTGKHPPGADQLESAKTK 119

Query: 118 LAGKAREMRDRAEQFGQQQITGSQ 141
           LA KAREM+DRAEQF QQ + GSQ
Sbjct: 120 LASKAREMKDRAEQFSQQPVAGSQ 143

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|198250343|gb|ACH85188.1| main allergen 15 kDa oleosin [Sesamum indicum]

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/143 (78%), Positives = 122/143 (85%), Gaps = 2/143 (1%)

Query: 1   MAEHYQPLQQTQLQSRQ--PRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLL 58
           MAEHY   QQT+    Q  PR+ +VVKAATAVTAGGSLLVLSGLT+AGTVIALTIATPLL
Sbjct: 1   MAEHYGQQQQTRAPHPQLQPRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPLL 60

Query: 59  VICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKL 118
           VI SPVLVPAVIT+ LL  GFLASGGFGVAA+SVLSWIYRY+TG HPPGADQLE A+ KL
Sbjct: 61  VIFSPVLVPAVITIFLLGAGFLASGGFGVAALSVLSWIYRYLTGKHPPGADQLESAKTKL 120

Query: 119 AGKAREMRDRAEQFGQQQITGSQ 141
           A KAREM+DRAEQF QQ + GSQ
Sbjct: 121 ASKAREMKDRAEQFSQQPVAGSQ 143

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148283923|gb|ABQ57397.1| oleosin L-isoform [Ficus pumila var. awkeotsang]

 Score =  211 bits (537), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 105/128 (82%), Positives = 115/128 (89%)

Query: 17  QPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLI 76
            PRSHQVVKAATAVTAGGSLLVLS L +AGTVIALTIATPL VI SPVLVPAVIT+ L+I
Sbjct: 25  HPRSHQVVKAATAVTAGGSLLVLSALILAGTVIALTIATPLFVIFSPVLVPAVITLGLII 84

Query: 77  MGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQ 136
           +GFLASGGFGVAA++VLSWIYRYVTG HPPGADQL+QAR KLA KAREM+D+AEQFGQQ 
Sbjct: 85  IGFLASGGFGVAALTVLSWIYRYVTGKHPPGADQLDQARHKLASKAREMKDKAEQFGQQH 144

Query: 137 ITGSQQGS 144
           +T  QQ S
Sbjct: 145 LTSGQQQS 152

Source: Ficus pumila var. awkeotsang

Species: Ficus pumila

Genus: Ficus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166831525|gb|ABW90150.2| oleosin 3 [Jatropha curcas]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 121/141 (85%), Gaps = 5/141 (3%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH     Q+Q   +QPRSHQVVKAATAVTAGGSLLVLSGLT+AGTVIALT+ TPLLVI
Sbjct: 1   MAEH----PQSQHVGQQPRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTVPTPLLVI 56

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPV+VP VITV L+I GFLASGGFGVAAI VL WIYRYVTG HPPGA+ L+QAR+KLAG
Sbjct: 57  FSPVMVPTVITVCLIITGFLASGGFGVAAIFVLFWIYRYVTGKHPPGAENLDQARLKLAG 116

Query: 121 KAREMRDRAEQFGQQQITGSQ 141
           KAREM+DRAEQFG Q +TG Q
Sbjct: 117 KAREMKDRAEQFG-QHVTGQQ 136

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29170509|gb|AAO65960.1| oleosin [Corylus avellana]

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/141 (80%), Positives = 124/141 (87%), Gaps = 3/141 (2%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH + LQ     + QPRSHQVVKAATA TAGGSLLV SGL +AGTVIALT+ATPL VI
Sbjct: 1   MAEHPRQLQDP---AHQPRSHQVVKAATAATAGGSLLVPSGLILAGTVIALTLATPLFVI 57

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPVLVPAVITVSL+IMGFLASGGFGVAA++VLSWIYRYVTG HPPGADQL+ ARMKLA 
Sbjct: 58  FSPVLVPAVITVSLIIMGFLASGGFGVAAVTVLSWIYRYVTGRHPPGADQLDHARMKLAS 117

Query: 121 KAREMRDRAEQFGQQQITGSQ 141
           KAREM+DRAEQFGQQ +TGSQ
Sbjct: 118 KAREMKDRAEQFGQQHVTGSQ 138

Source: Corylus avellana

Species: Corylus avellana

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|95925793|gb|ABF57563.1| OleIII [Camellia oleifera]

 Score =  206 bits (524), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 102/122 (83%), Positives = 111/122 (90%)

Query: 20  SHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGF 79
           +H +VKAATA+TAGGSLLVLSGLT+AGTVIAL +ATPLLVI SPVLVPA +TV LL MGF
Sbjct: 17  AHYMVKAATAITAGGSLLVLSGLTLAGTVIALALATPLLVIFSPVLVPAAVTVCLLNMGF 76

Query: 80  LASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQQITG 139
           LASGGFGVA ISVLSWIYRYVTG HPPGADQL+QAR KLA KAREM+DRAEQFGQQ I+G
Sbjct: 77  LASGGFGVAGISVLSWIYRYVTGKHPPGADQLDQARTKLASKAREMKDRAEQFGQQHISG 136

Query: 140 SQ 141
           SQ
Sbjct: 137 SQ 138

Source: Camellia oleifera

Species: Camellia oleifera

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053683|ref|XP_002297927.1| predicted protein [Populus trichocarpa] gi|222845185|gb|EEE82732.1| predicted protein [Populus trichocarpa]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/138 (76%), Positives = 118/138 (85%), Gaps = 4/138 (2%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAE    LQQ+Q   +QPRS Q+VKA TAVTAGGSLLVLSGLT+A TVI LTIATPLLVI
Sbjct: 1   MAE----LQQSQQPGKQPRSQQIVKATTAVTAGGSLLVLSGLTLAATVILLTIATPLLVI 56

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPV+VPAV+ VSLL+MGFLASGGFGVA I+ +SWIY YVTG HPPG+DQLEQAR+KLA 
Sbjct: 57  FSPVIVPAVMAVSLLLMGFLASGGFGVAGITAMSWIYGYVTGRHPPGSDQLEQARIKLAV 116

Query: 121 KAREMRDRAEQFGQQQIT 138
           KAREM+DRAEQFG Q I+
Sbjct: 117 KAREMKDRAEQFGHQVIS 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357378944|gb|AET74077.1| oleosin [Juglans regia]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 124/141 (87%), Gaps = 3/141 (2%)

Query: 1   MAEHYQPLQQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVI 60
           MAEH Q   Q+Q    QPRSHQVVKAATA TAGGSLLVLSGL + GTVI+LT+ATPL VI
Sbjct: 1   MAEHQQ---QSQRPDLQPRSHQVVKAATAATAGGSLLVLSGLILTGTVISLTVATPLFVI 57

Query: 61  CSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG 120
            SPVLVPAVITV+L+I+GFLASGGFGVAA++VLSWIYRYVTG  PPGA+Q++QARM+LA 
Sbjct: 58  FSPVLVPAVITVALIILGFLASGGFGVAAVTVLSWIYRYVTGRQPPGAEQIDQARMRLAS 117

Query: 121 KAREMRDRAEQFGQQQITGSQ 141
           KAREM+DRAEQFGQQ ++G+Q
Sbjct: 118 KAREMKDRAEQFGQQHVSGAQ 138

Source: Juglans regia

Species: Juglans regia

Genus: Juglans

Family: Juglandaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2117328	173	OLEO1 "AT4G25140" [Arabidopsis	0.756	0.630	0.651	2.8e-34
TAIR|locus:2176212	141	OLEO3 "AT5G51210" [Arabidopsis	0.708	0.723	0.609	3.4e-29
TAIR|locus:2043470	149	AT2G25890 "AT2G25890" [Arabido	0.645	0.624	0.677	7.1e-29
TAIR|locus:2084223	183	AT3G01570 "AT3G01570" [Arabido	0.666	0.524	0.44	7.5e-18
TAIR|locus:2170558	199	OLEO2 "AT5G40420" [Arabidopsis	0.597	0.432	0.476	1.6e-17
TAIR|locus:2089189	191	OLEO4 "AT3G27660" [Arabidopsis	0.604	0.455	0.448	3.2e-17
TAIR|locus:2151606	294	AT5G61610 [Arabidopsis thalian	0.597	0.292	0.442	2.3e-16
TAIR|locus:2183414	106	GRP19 "glycine-rich protein 19	0.5	0.679	0.527	1.6e-15
TAIR|locus:2028471	169	AT1G48990 "AT1G48990" [Arabido	0.645	0.550	0.371	1.3e-13
TAIR|locus:2086879	166	AT3G18570 "AT3G18570" [Arabido	0.638	0.554	0.354	1.6e-13

TAIR|locus:2117328 OLEO1 "AT4G25140" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 71/109 (65%), Positives = 88/109 (80%)

Query:    22 QXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLA 81
             Q          GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+
Sbjct:    42 QIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLS 101

Query:    82 SGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 130
             SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   102 SGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 150

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2176212 OLEO3 "AT5G51210" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 64/105 (60%), Positives = 82/105 (78%)

Query:    22 QXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLA 81
             Q          GGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLA
Sbjct:    26 QMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLA 85

Query:    82 SGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMR 126
             SGGFG+AAI+  SW+YR++TG    G+D++E ARMK+  + ++ +
Sbjct:    86 SGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2043470 AT2G25890 "AT2G25890" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 63/93 (67%), Positives = 78/93 (83%)

Query:    33 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISV 92
             G SLLVLSGLT+ GTVI L +ATPL+V+ SPVLVPAVIT+ LL MGFL SGG GVAA + 
Sbjct:    38 GLSLLVLSGLTLTGTVIGLIVATPLMVLFSPVLVPAVITIGLLTMGFLFSGGCGVAAATA 97

Query:    93 LSWIYRYVTGGHPPGADQLEQARMKLAGKAREM 125
             L+WIY+YVTG HP GAD+++ ARM++A KA+E+
Sbjct:    98 LTWIYKYVTGKHPMGADKVDYARMRIAEKAKEL 130

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2084223 AT3G01570 "AT3G01570" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 44/100 (44%), Positives = 66/100 (66%)

Query:    33 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISV 92
             GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + GFLASG  G+  +S 
Sbjct:    47 GGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSS 106

Query:    93 LSWIYRYV--TGGHPPGADQLEQARMKLAGKAREMRDRAE 130
             +SW+  Y+   G H P  ++LE+A+ +LA  A  +  R +
Sbjct:   107 MSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTK 144

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2170558 OLEO2 "AT5G40420" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 41/86 (47%), Positives = 60/86 (69%)

Query:    34 GSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVL 93
             GSLL L+GL +AG+VI L +A PL ++ SPV+VPA +T+ L + GFLASG FG+  +S +
Sbjct:    65 GSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSI 124

Query:    94 SWIYRYVTGGHPPGADQLEQARMKLA 119
             SW+  Y+ G      +QLE A+ ++A
Sbjct:   125 SWVMNYLRGTRRTVPEQLEYAKRRMA 150

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA;IDA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2089189 OLEO4 "AT3G27660" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 39/87 (44%), Positives = 61/87 (70%)

Query:    33 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISV 92
             GG+LL L+GLT+AG+VI L ++ PL ++ SPV+VPA +T+ L + G LASG FG+  +S 
Sbjct:    62 GGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSS 121

Query:    93 LSWIYRYVTGGHPPGADQLEQARMKLA 119
             +SW+  Y+ G      +QL+ A+ ++A
Sbjct:   122 VSWVLNYLRGTSDTVPEQLDYAKRRMA 148

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0010344 "seed oilbody biogenesis" evidence=IGI

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2151606 AT5G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 42/95 (44%), Positives = 60/95 (63%)

Query:    35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLS 94
             S ++L+GLT AGT +ALT+  P+LV+ SP+LVPAVIT S L  GFLASG  G   I++L 
Sbjct:    20 SFMILTGLTFAGTAVALTVMIPVLVVLSPILVPAVITSSFLATGFLASGSLGALGIALLI 79

Query:    95 WIYR---------YVTGGHPPGADQLEQARMKLAG 120
             W+Y+         +  GG P G ++L ++  +  G
Sbjct:    80 WLYKKEEYSRATLHARGGRPDGPNKLAESGKQSGG 114

GO:0005576 "extracellular region" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2183414 GRP19 "glycine-rich protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query:    35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLS 94
             +LL  +G+T+ G+V+A  I+TPL VI SPVLVPA I  +LL  GF ASG FG  A ++LS
Sbjct:    16 ALLTFAGITLGGSVVACIISTPLFVIFSPVLVPATIATTLLASGFTASGSFGATAFTILS 75

Query:    95 WIYRYVTGGHPP 106
             W+Y+  TG   P
Sbjct:    76 WLYKKRTGRDLP 87

GO:0009507 "chloroplast" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0005576 "extracellular region" evidence=IDA

GO:0008289 "lipid binding" evidence=ISS

GO:0019953 "sexual reproduction" evidence=RCA;IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2028471 AT1G48990 "AT1G48990" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query:    33 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISV 92
             GG LL+L+G+T+   V+      PL++I SP+ +P    + L++ GFL+  G  +A  +V
Sbjct:    62 GGILLLLTGITVTAFVLGFIAFLPLIIISSPIWIP----LFLIVTGFLSLAGLILATGAV 117

Query:    93 LSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRA 129
             +SW+YRY  G HP  +DQ++ AR ++   A  ++D A
Sbjct:   118 VSWLYRYFKGMHPLRSDQVDYARSRIHDTAAHVKDYA 154

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2086879 AT3G18570 "AT3G18570" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 34/96 (35%), Positives = 56/96 (58%)

Query:    34 GSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVL 93
             G LL L G+++   V+   +  PL++I SP+ +P  + V     GFL   GF V  ++++
Sbjct:    57 GILLFLLGVSVTAAVLGFIVFLPLIIISSPIWIPVFVVVG----GFLTVSGFLVGTVALV 112

Query:    94 SWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRA 129
             SW YRY  G HP G++Q++ AR ++   A  ++D A
Sbjct:   113 SWTYRYFRGMHPVGSNQMDYARSRIYDTASHVKDYA 148

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42980	OLEO1_ORYSJ	No assigned EC number	0.6016	0.8194	0.7972	yes	no
Q43804	OLEO1_PRUDU	No assigned EC number	0.7430	0.9861	0.9594	N/A	no
P29525	OLEO1_ARATH	No assigned EC number	0.6126	0.9861	0.8208	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
pfam01277	118	pfam01277, Oleosin, Oleosin	3e-42

>gnl|CDD|110290 pfam01277, Oleosin, Oleosin

 Score =  135 bits (343), Expect = 3e-42
 Identities = 62/116 (53%), Positives = 80/116 (68%)

Query: 19  RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMG 78
            + QV+   TA+ AGGSLLVL+GLT+AGTVI L +ATPL VI SPVLVPA I + L + G
Sbjct: 1   STSQVLAVVTALPAGGSLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVTG 60

Query: 79  FLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQ 134
           FLASG FG+  +S LSW+ +YV G HPP  DQL+ A+ +L   A     + ++ GQ
Sbjct: 61  FLASGAFGLTGLSSLSWLLKYVRGKHPPVPDQLDYAKRRLQEAAEYAGQKTKEMGQ 116

Length = 118

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	100.0
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	94.61
PF11990	121	DUF3487: Protein of unknown function (DUF3487); In	93.61
PF08006	181	DUF1700: Protein of unknown function (DUF1700); In	92.16
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	90.04
PRK09459	76	pspG phage shock protein G; Reviewed	87.38
PF07332	121	DUF1469: Protein of unknown function (DUF1469); In	84.82
PF07178	95	TraL: TraL protein; InterPro: IPR009838 This entry	83.9
PRK10801	227	colicin uptake protein TolQ; Provisional	82.17

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=100.00  E-value=1.1e-52  Score=317.92  Aligned_cols=117  Identities=53%  Similarity=0.922  Sum_probs=115.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040357           19 RSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYR   98 (144)
Q Consensus        19 ss~qvl~~~tl~~~g~~LL~LaGlTL~gtvigL~vaTPLfvifSPVLVPAai~~~l~~~Gfl~sg~~gltals~lsW~y~   98 (144)
                      |++|+++++++++++++||+|+|+||+||++||+++||||+||||||||++|+++++++||+++|+||++++++++|+||
T Consensus         1 s~~qvl~~~~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~~l~~~Gfl~sg~~g~~~ls~lsW~~~   80 (118)
T PF01277_consen    1 STSQVLAVVTLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVAGFLTSGAFGLTALSSLSWMYN   80 (118)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCcHHHHHHHHhhHHHHHHHHHHHhchh
Q 040357           99 YVTGGHPPGADQLEQARMKLAGKAREMRDRAEQFGQQ  135 (144)
Q Consensus        99 y~rg~~p~g~~~ld~Ar~ri~d~A~~v~~ka~e~G~q  135 (144)
                      |+||+||+++||+||||+|++|+|+|++||+|||||+
T Consensus        81 y~rg~~~~~~~q~d~Ak~ri~d~a~~v~~kake~gq~  117 (118)
T PF01277_consen   81 YFRGRHPPGPDQLDYAKRRIADTASYVGQKAKEVGQK  117 (118)
T ss_pred             HhccCCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999975

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=94.61  E-value=1.6  Score=33.63  Aligned_cols=98  Identities=20%  Similarity=0.264  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHhhchhhh---HHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCCCC
Q 040357           35 SLLVLSGLTMAGTVIALTIATPLLVICSPVLV---PAVITVSLLIMGFLASG--GFGVAAISVLSWIYRYVTGGHPPGAD  109 (144)
Q Consensus        35 ~LL~LaGlTL~gtvigL~vaTPLfvifSPVLV---PAai~~~l~~~Gfl~sg--~~gltals~lsW~y~y~rg~~p~g~~  109 (144)
                      +++...|..|.=+-+-|+-+.=-+++.+|++|   |.-+-+++++ ++...|  ..|.-+++.++|+-.-+|=.+...+.
T Consensus        10 ~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~-~l~~~Gfl~sg~~g~~~ls~lsW~~~y~rg~~~~   88 (118)
T PF01277_consen   10 TLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAI-GLAVAGFLTSGAFGLTALSSLSWMYNYFRGRHPP   88 (118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            34444444444444444444444788899876   6555544433 444443  34555788899999988877766665


Q ss_pred             cHHHHHHHHhhHHHHHHHHHHHhchhhh
Q 040357          110 QLEQARMKLAGKAREMRDRAEQFGQQQI  137 (144)
Q Consensus       110 ~ld~Ar~ri~d~A~~v~~ka~e~G~q~~  137 (144)
                      ..|    |+...-+.+.|++++.+|+..
T Consensus        89 ~~~----q~d~Ak~ri~d~a~~v~~kak  112 (118)
T PF01277_consen   89 GPD----QLDYAKRRIADTASYVGQKAK  112 (118)
T ss_pred             CCc----cHHHHHHHHHHHHHHHHHHHH
Confidence            553    455556678888888887755

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised

Probab=93.61  E-value=0.33  Score=37.00  Aligned_cols=49  Identities=18%  Similarity=0.262  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHhhhHHhhchh-hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC
Q 040357           44 MAGTVIALTIATPLLVICSPV-LVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGG  103 (144)
Q Consensus        44 L~gtvigL~vaTPLfvifSPV-LVPAai~~~l~~~Gfl~sg~~gltals~lsW~y~y~rg~  103 (144)
                      ..++++|+.++.|+.+++.++ .+|..+.++.+..-|+.           -.|+-|+-|||
T Consensus        31 ~~~~~~g~~~gl~la~~~g~~a~~pt~~ll~~~~~v~~g-----------g~~l~rlKRGK   80 (121)
T PF11990_consen   31 GVGFVAGLVVGLPLALLTGWWAMIPTGALLGPILGVFVG-----------GKLLARLKRGK   80 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHcCC
Confidence            346788888999998889888 67877666665544433           35777777764

This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.

>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT)

Probab=92.16  E-value=4.5  Score=31.41  Aligned_cols=24  Identities=29%  Similarity=0.343  Sum_probs=10.8

Q ss_pred             HHHHHHHHHHHHHhhhHHhhchhhh
Q 040357           42 LTMAGTVIALTIATPLLVICSPVLV   66 (144)
Q Consensus        42 lTL~gtvigL~vaTPLfvifSPVLV   66 (144)
                      +.+...++++.++.. .++++|++.
T Consensus       101 ~~~~~~~~~~~i~~~-~~i~~~~~l  124 (181)
T PF08006_consen  101 IVLILLVLALIIAVI-AFILSGIIL  124 (181)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            333444555444433 334555444

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=90.04  E-value=3.8  Score=31.69  Aligned_cols=15  Identities=27%  Similarity=0.193  Sum_probs=7.1

Q ss_pred             hHHhhchhhhHHHHH
Q 040357           57 LLVICSPVLVPAVIT   71 (144)
Q Consensus        57 LfvifSPVLVPAai~   71 (144)
                      +-.++|+++..+.++
T Consensus        33 l~~~~s~~lg~~~lA   47 (191)
T PF04156_consen   33 LGALISFILGIALLA   47 (191)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            444555554444443

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PRK09459 pspG phage shock protein G; Reviewed

Probab=87.38  E-value=6.2  Score=28.51  Aligned_cols=26  Identities=27%  Similarity=0.644  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHh
Q 040357           35 SLLVLSGLTMAGTVIALTIATPLLVI   60 (144)
Q Consensus        35 ~LL~LaGlTL~gtvigL~vaTPLfvi   60 (144)
                      ..|+++|+|+.|...++.+++-+..+
T Consensus        12 ~~LlvTGiSllgv~aAl~va~~vM~l   37 (76)
T PRK09459         12 VMLLVTGISLLGIIAALGVATLVMFL   37 (76)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            45788999999999998887765544

>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like

Probab=84.82  E-value=12  Score=26.89  Aligned_cols=17  Identities=18%  Similarity=0.073  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHHHhcC
Q 040357           87 VAAISVLSWIYRYVTGG  103 (144)
Q Consensus        87 ltals~lsW~y~y~rg~  103 (144)
                      +.+.-.+.|.+|.++++
T Consensus        84 ~la~i~~~~~~~~l~~~  100 (121)
T PF07332_consen   84 LLALILLLIGRRRLRRA  100 (121)
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            44445566777777753

The function is not known.

>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins

Probab=83.90  E-value=4.2  Score=29.16  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcCCCCC
Q 040357           72 VSLLIMGFLASG-GFGVAAISVLSWIYRYVTGGHPPG  107 (144)
Q Consensus        72 ~~l~~~Gfl~sg-~~gltals~lsW~y~y~rg~~p~g  107 (144)
                      +...+.|++.+. ..|+..-..+.|.||+++..+|.|
T Consensus        27 ~~~~~~gi~~~~~~~g~i~g~~~~~~~~k~K~~~~~g   63 (95)
T PF07178_consen   27 LILFVIGILSGHFLIGLILGIVLWWGYRKFKKGRGRG   63 (95)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHccCCcc
Confidence            333444555555 356666667899999999888754

TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane

>PRK10801 colicin uptake protein TolQ; Provisional

Probab=82.17  E-value=16  Score=30.21  Aligned_cols=73  Identities=16%  Similarity=0.156  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHhhhHHhh---chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHhh
Q 040357           44 MAGTVIALTIATPLLVIC---SPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAG  120 (144)
Q Consensus        44 L~gtvigL~vaTPLfvif---SPVLVPAai~~~l~~~Gfl~sg~~gltals~lsW~y~y~rg~~p~g~~~ld~Ar~ri~d  120 (144)
                      |.|||+|++-+.--+=.-   +|-.+-.+|..+|.++.      +|+..-=.-...|||+..       ++|.-..+|-+
T Consensus       139 LlGTV~Gmi~aF~~i~~~g~~~~~~~a~GI~~ALitTa------~GL~vAIPAli~yN~f~~-------ri~~i~~~le~  205 (227)
T PRK10801        139 LFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATA------IGLFAAIPAVMAYNRLNQ-------RVNKLELNYDN  205 (227)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence            568888887753222111   34445555555555443      344444444578999974       45666666666


Q ss_pred             HHHHHHHHH
Q 040357          121 KAREMRDRA  129 (144)
Q Consensus       121 ~A~~v~~ka  129 (144)
                      .+.++-+.-
T Consensus       206 ~a~~ll~~l  214 (227)
T PRK10801        206 FMEEFTAIL  214 (227)
T ss_pred             HHHHHHHHH
Confidence            666665544

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00