Citrus Sinensis ID: 040429

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MQRLVHRPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHcHHHHHHHHcccccccHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHccccEEEEEcccEEEEEEcccEEEEEEcccccccccccccEEEEEEccHHHHHHHHHHcccEEEccEEEccccEEEEEEcccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccEEEEEEEcccccccHcHHEcccccccHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccEEEEEcccHEEEccccEEEEEEEcccccccccccccEEEEEEccHHHHHHHHHHcccccccccEcccccEEEEEEcccccEEEEEccc
Coil and Loop (DISEMBL)
mqrlvhrpwapreVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAElqsgplklalmqspsdhvvqngnsslLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCidghmlglyepa
Flexible Loop (DISEMBL)
mqrlvhrpwaprevrIRVLHslsgslvkssarlskvhkrdevrerereRRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Low Complexity Region (SEG)
MQRLVHRPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDevrerererrvMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Disordered region (IsUnstruct)
********W**REVRIRVLHS*****************************VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALM*****HVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY***
Disordered Region (DISOPRED)
****************RVLHSLSGSL*****************************SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSP******NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Disordered Region (DISEMBL)
MQRLVHRPWAPREVRIRVLHSLSGSLV***********************VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Disordered Region (DISPRO)
*QRLVHRPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQRLVHRPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
255537661	117	catalytic, putative [Ricinus communis] g	0.696	1.0	0.923	5e-58
449524902	117	PREDICTED: uncharacterized LOC101214305	0.690	0.991	0.923	1e-56
297742279	650	unnamed protein product [Vitis vinifera]	0.684	0.176	0.904	1e-56
224072071	118	predicted protein [Populus trichocarpa]	0.690	0.983	0.905	1e-55
359473885	116	PREDICTED: uncharacterized protein LOC10	0.684	0.991	0.904	2e-55
357481505	116	hypothetical protein MTR_5g009740 [Medic	0.678	0.982	0.894	9e-55
15238137	117	lactoylglutathione lyase family protein	0.696	1.0	0.829	1e-52
351723257	116	uncharacterized protein LOC100500516 [Gl	0.678	0.982	0.842	8e-52
297805484	119	lactoylglutathione lyase family protein	0.696	0.983	0.823	5e-51
356539523	117	PREDICTED: uncharacterized protein LOC10	0.678	0.974	0.826	2e-50

>gi|255537661|ref|XP_002509897.1| catalytic, putative [Ricinus communis] gi|223549796|gb|EEF51284.1| catalytic, putative [Ricinus communis]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 108/117 (92%), Positives = 111/117 (94%)

Query: 52  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
           MAAASFRWILQLHKDVPKAARFYS GLDFTVNVCTLRWAELQSG LKLALMQSP+DHVVQ
Sbjct: 1   MAAASFRWILQLHKDVPKAARFYSHGLDFTVNVCTLRWAELQSGSLKLALMQSPNDHVVQ 60

Query: 112 NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            G SS+LSFTVTDINS VTKLMALGAELDGSIKYEIHGKVAAMRC DGH+LGLYEPA
Sbjct: 61  KGYSSMLSFTVTDINSTVTKLMALGAELDGSIKYEIHGKVAAMRCTDGHVLGLYEPA 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524902|ref|XP_004169460.1| PREDICTED: uncharacterized LOC101214305 [Cucumis sativus]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 109/118 (92%), Positives = 113/118 (95%), Gaps = 2/118 (1%)

Query: 52  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
           MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQS +DH+VQ
Sbjct: 1   MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQS-NDHIVQ 59

Query: 112 N-GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
             G SSLLSFTVTDINS VTKLMA+GAELDGSIKYEIHGKVA+MRCIDGHMLGLYEPA
Sbjct: 60  QKGYSSLLSFTVTDINSTVTKLMAMGAELDGSIKYEIHGKVASMRCIDGHMLGLYEPA 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742279|emb|CBI34428.3| unnamed protein product [Vitis vinifera]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 104/115 (90%), Positives = 108/115 (93%)

Query: 54  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG 113
           AASFRWILQLHKDVP+AARFYSEGLDFT+NVCTLRWAELQSGPLKLALMQ+ SDH +Q G
Sbjct: 536 AASFRWILQLHKDVPRAARFYSEGLDFTINVCTLRWAELQSGPLKLALMQNQSDHDMQKG 595

Query: 114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            SSLLSFTVTDINS VTKLMALGAELDG IKYEIHGKVAAMRCIDGHMLGLYE A
Sbjct: 596 YSSLLSFTVTDINSTVTKLMALGAELDGPIKYEIHGKVAAMRCIDGHMLGLYEAA 650

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072071|ref|XP_002303619.1| predicted protein [Populus trichocarpa] gi|118482666|gb|ABK93252.1| unknown [Populus trichocarpa] gi|222841051|gb|EEE78598.1| predicted protein [Populus trichocarpa]

 Score =  220 bits (561), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/116 (90%), Positives = 108/116 (93%)

Query: 53  AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQN 112
            AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG LKLALMQS ++HVVQ 
Sbjct: 3   GAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGSLKLALMQSHNNHVVQK 62

Query: 113 GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
           G SSLLSFTVTDIN+ VTKLMALGAELDG IKYEIHGKVAAMRCIDGHMLGLYE A
Sbjct: 63  GYSSLLSFTVTDINTTVTKLMALGAELDGPIKYEIHGKVAAMRCIDGHMLGLYESA 118

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473885|ref|XP_003631373.1| PREDICTED: uncharacterized protein LOC100854951 [Vitis vinifera]

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/115 (90%), Positives = 108/115 (93%)

Query: 54  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG 113
           AASFRWILQLHKDVP+AARFYSEGLDFT+NVCTLRWAELQSGPLKLALMQ+ SDH +Q G
Sbjct: 2   AASFRWILQLHKDVPRAARFYSEGLDFTINVCTLRWAELQSGPLKLALMQNQSDHDMQKG 61

Query: 114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            SSLLSFTVTDINS VTKLMALGAELDG IKYEIHGKVAAMRCIDGHMLGLYE A
Sbjct: 62  YSSLLSFTVTDINSTVTKLMALGAELDGPIKYEIHGKVAAMRCIDGHMLGLYEAA 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481505|ref|XP_003611038.1| hypothetical protein MTR_5g009740 [Medicago truncatula] gi|355512373|gb|AES93996.1| hypothetical protein MTR_5g009740 [Medicago truncatula]

 Score =  218 bits (554), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 102/114 (89%), Positives = 105/114 (92%)

Query: 54  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG 113
           AASFRW+LQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALM SP D   Q G
Sbjct: 2   AASFRWLLQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMHSPIDQSTQKG 61

Query: 114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP 167
            SSLLSFTVTDINS VTKLMALGAELDG IKYE+HGKVAAMRCIDGH+LGLYEP
Sbjct: 62  YSSLLSFTVTDINSTVTKLMALGAELDGPIKYEVHGKVAAMRCIDGHLLGLYEP 115

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238137|ref|NP_198980.1| lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] gi|10178019|dbj|BAB11471.1| unnamed protein product [Arabidopsis thaliana] gi|26452670|dbj|BAC43418.1| unknown protein [Arabidopsis thaliana] gi|28827256|gb|AAO50472.1| unknown protein [Arabidopsis thaliana] gi|332007320|gb|AED94703.1| lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 108/117 (92%)

Query: 52  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
           MA ASFRWILQLH+DVPKAARFY++GLDF+VNV TLRWAEL SGP+KLALMQSPS+HV +
Sbjct: 1   MATASFRWILQLHRDVPKAARFYAQGLDFSVNVVTLRWAELHSGPIKLALMQSPSNHVAE 60

Query: 112 NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            G SSLLSFTVTDIN+ VTKLMALGAELDG+IKYEIHGKVAAM+C DG+MLGLYE A
Sbjct: 61  KGYSSLLSFTVTDINTTVTKLMALGAELDGTIKYEIHGKVAAMKCPDGYMLGLYEAA 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723257|ref|NP_001235481.1| uncharacterized protein LOC100500516 [Glycine max] gi|255630518|gb|ACU15617.1| unknown [Glycine max]

 Score =  207 bits (528), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 96/114 (84%), Positives = 104/114 (91%)

Query: 54  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG 113
           AASFRWILQLHKDVPKAARFYSEGLDF++NVC+LRWAELQSG LKLALM SP++   Q G
Sbjct: 2   AASFRWILQLHKDVPKAARFYSEGLDFSINVCSLRWAELQSGSLKLALMHSPNEQATQKG 61

Query: 114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP 167
            SSLLSFTV D+NS VTKLMALGAELDG IKYE+HGKVAAMRCIDGH+LGLYEP
Sbjct: 62  YSSLLSFTVPDMNSTVTKLMALGAELDGPIKYEVHGKVAAMRCIDGHILGLYEP 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805484|ref|XP_002870626.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316462|gb|EFH46885.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  205 bits (522), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 98/119 (82%), Positives = 106/119 (89%), Gaps = 2/119 (1%)

Query: 52  MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
           MA ASFRWILQLH+DVPKAARFY++GLDF+VNV TLRWAEL SGPLKLALMQSPSDHV +
Sbjct: 1   MATASFRWILQLHRDVPKAARFYAQGLDFSVNVVTLRWAELHSGPLKLALMQSPSDHVAE 60

Query: 112 NGNSSLLSFT--VTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            G SSLLSFT    DIN+ VTKLMALGAELDG+IKYEIHGKVAAMRC DG+MLGLYE A
Sbjct: 61  KGYSSLLSFTQEAADINTTVTKLMALGAELDGTIKYEIHGKVAAMRCPDGYMLGLYEAA 119

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539523|ref|XP_003538247.1| PREDICTED: uncharacterized protein LOC100812515 [Glycine max]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/115 (82%), Positives = 105/115 (91%), Gaps = 1/115 (0%)

Query: 54  AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDH-VVQN 112
           AASFRWILQLHKDVPKAARFYS+GLDF++NVC+LRWAELQSG LKLALM SP++    Q 
Sbjct: 2   AASFRWILQLHKDVPKAARFYSQGLDFSINVCSLRWAELQSGSLKLALMHSPNEQQATQK 61

Query: 113 GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP 167
           G SSLLSFTVTD+NS +TKLMALGAELDG IKYE+HGKVAAMRCIDGH+LGLYEP
Sbjct: 62  GYSSLLSFTVTDMNSTLTKLMALGAELDGPIKYEVHGKVAAMRCIDGHVLGLYEP 116

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2160517	117	AT5G41650 "AT5G41650" [Arabido	0.696	1.0	0.829	1.1e-48
TAIR|locus:505006200	118	AT1G64185 "AT1G64185" [Arabido	0.696	0.991	0.788	1.2e-47
TIGR_CMR|GSU_0119	116	GSU_0119 "glyoxalase family pr	0.607	0.879	0.291	5.5e-06

TAIR|locus:2160517 AT5G41650 "AT5G41650" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 97/117 (82%), Positives = 108/117 (92%)

Query:    52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
             MA ASFRWILQLH+DVPKAARFY++GLDF+VNV TLRWAEL SGP+KLALMQSPS+HV +
Sbjct:     1 MATASFRWILQLHRDVPKAARFYAQGLDFSVNVVTLRWAELHSGPIKLALMQSPSNHVAE 60

Query:   112 NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
              G SSLLSFTVTDIN+ VTKLMALGAELDG+IKYEIHGKVAAM+C DG+MLGLYE A
Sbjct:    61 KGYSSLLSFTVTDINTTVTKLMALGAELDGTIKYEIHGKVAAMKCPDGYMLGLYEAA 117

GO:0003824 "catalytic activity" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:505006200 AT1G64185 "AT1G64185" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 93/118 (78%), Positives = 109/118 (92%)

Query:    52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVV- 110
             MA ASFRWILQLH+DVPKAARFY +GLDF+VNV TLRWAELQSGPLKLALMQ+PS+HV+ 
Sbjct:     1 MATASFRWILQLHRDVPKAARFYEKGLDFSVNVVTLRWAELQSGPLKLALMQAPSEHVMS 60

Query:   111 QNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
             + G SSLLSFTV DIN+ ++KLM LGAELDGSIKYE+HGKVA++RC+DGH+LGLYEP+
Sbjct:    61 EKGYSSLLSFTVADINTTISKLMELGAELDGSIKYEVHGKVASVRCLDGHVLGLYEPS 118

GO:0003824 "catalytic activity" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=ISS

TIGR_CMR|GSU_0119 GSU_0119 "glyoxalase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 30/103 (29%), Positives = 51/103 (49%)

Query:    65 KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPS-DHVVQNGNSSLLSFTVT 123
             +D+  A RFYSE L   +    +   E  SG   L + Q+ + D +V  G  + ++F V 
Sbjct:    13 RDLEAAKRFYSEQLKLPLAQAGMTMMEFFSGGTTLGVAQALTPDALVFVGRHTGITFRVK 72

Query:   124 DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE 166
             DI+S   +L+  G   D  ++    GK+A +   DG++  L +
Sbjct:    73 DIDSFCKELVQAGVRFDQPLEQSPWGKMAVVSDPDGNLFALVD 115


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       157   0.00079  106 3  11 22  0.45    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.08u 0.08s 14.16t   Elapsed:  00:00:00
  Total cpu time:  14.08u 0.08s 14.16t   Elapsed:  00:00:00
  Start:  Fri May 10 19:08:26 2013   End:  Fri May 10 19:08:26 2013

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002496001 SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (116 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	2e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	5e-11
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	8e-07
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	1e-04
cd07264	125	cd07264, Glo_EDI_BRP_like_15, This conserved domai	1e-04

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSG----PLKLALMQSPSDHVVQNGNSSLLSF 120
            D+  A  FY E L F V      +AE + G          +    +     G    L F
Sbjct: 4   SDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYF 63

Query: 121 TVTDINSAVTKLMALGAE-LDGSIKYEIHGKVAAMRCIDGHMLGLY 165
            V D+++ V +L A G   L+        G+   +R  DG+++ L 
Sbjct: 64  EVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 56.3 bits (136), Expect = 5e-11
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 65  KDVPKAARFYSEGLDFTV---NVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFT 121
            D+  A  FY + L F V   +     +A L+ G  +L L +         G    L+F 
Sbjct: 7   PDLEAAVAFYEDVLGFEVLERDGGGAEFAFLRLGGTRLELFEGDEPAPPSGGGGVHLAFE 66

Query: 122 VTDINSAVTKLMALGAE-LDGSIKYEIHGKVAAMRCIDGHMLGL 164
           V D+++AV +L A G E L G  +    G+VA  R  DG+++ L
Sbjct: 67  VDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 10/109 (9%)

Query: 65  KDVPKAARFYSEGLDFTV--NVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV 122
            D+ K+  FY + L F V        +A++     +L L +   D  V  G    +   V
Sbjct: 7   SDIEKSLAFYRDVLGFEVDFEHPEPLYAQVSRDGAQLHLSEHDGDEWVPLGRGGNVYIEV 66

Query: 123 TDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCI-----DGHMLGLYE 166
            D+++   +L A GA+L   I Y    +    R       DG++L   E
Sbjct: 67  DDVDALYAELKAKGAKL---IVYPPEDQPWGQREFAVQDPDGNLLRFGE 112

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 12/116 (10%)

Query: 63  LHKDVPKAARFYSEGLDFTV-----NVCTLRWAELQ---SGPLKLALMQSPSDHVVQNGN 114
              D  KA  FY+E L F V          RW  +    S    L L    +   + +G 
Sbjct: 5   YVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAAMASGL 64

Query: 115 SSL----LSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE 166
                  L     DI++   +L A G E     +   +G VA  R  DG++  L +
Sbjct: 65  QPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGTVAVFRDPDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176685 cd07264, Glo_EDI_BRP_like_15, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 65  KDVPKAARFYSEGLDFTVNVCT--LRWAELQSGPLKLA-----LMQS--PSDHV-VQNGN 114
           +DV K   FY     F          + EL++G   LA     L +S      V      
Sbjct: 9   EDVEKTLEFYERAFGFERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQ 68

Query: 115 SSL---LSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
                 ++F   D+ +A  + +  GA L    K +  G  VA +R I+G ++ L  P
Sbjct: 69  PPAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.86
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.85
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.84
PRK11478	129	putative lyase; Provisional	99.84
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.83
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.83
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.83
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.82
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.82
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.82
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.82
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.81
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.81
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.81
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.81
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.81
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.81
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.8
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.8
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.8
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.8
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.8
PLN02367	233	lactoylglutathione lyase	99.8
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.8
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.8
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.8
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.8
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.79
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.79
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.79
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.79
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.79
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.79
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.79
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.79
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.79
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.79
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.79
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.79
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.78
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.78
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.78
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.78
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.78
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.78
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.78
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.77
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.77
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.77
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.77
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.77
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.76
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.76
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.76
PLN03042	185	Lactoylglutathione lyase; Provisional	99.76
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.75
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.75
PRK06724	128	hypothetical protein; Provisional	99.75
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.75
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.75
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.74
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.74
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.74
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.73
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.73
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.73
PRK10291	129	glyoxalase I; Provisional	99.72
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.72
PLN02300	286	lactoylglutathione lyase	99.71
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.68
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.66
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.65
PLN02300	286	lactoylglutathione lyase	99.65
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.65
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.64
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.5
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.45
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.45
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.29
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.27
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.26
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.24
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.24
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.09
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.03
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.99
PRK10148	147	hypothetical protein; Provisional	98.87
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.76
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.61
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.53
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.39
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.29
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.14
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.99
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.91
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.88
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.88
PF15067	236	FAM124: FAM124 family	97.83
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.58
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.48
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	97.0
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.83
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	95.34
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	95.03
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	88.64
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	86.65
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	83.25

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.86  E-value=2e-20  Score=127.91  Aligned_cols=109  Identities=21%  Similarity=0.301  Sum_probs=87.7

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEec---ccEEEEEeCC-eEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCT---LRWAELQSGP-LKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKL  132 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~~~~~~~~~~-~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l  132 (168)
                      ++|+.|.|+|+++|++||+++|||++....   ..++.+..++ ..+.+....... ...+...+++|.++|+++++++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~v~di~~~~~~l   79 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGDGGGDYAVFSTGGGAVGGLMKAPEPA-AGSPPGWLVYFAVDDVDAAAARV   79 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccCCCCceEEEEeCCccEEEEecCCCCC-CCCCCeEEEEEEeCCHHHHHHHH
Confidence            479999999999999999999999998765   4677777653 455665544332 22345567999999999999999


Q ss_pred             HHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEe
Q 040429          133 MALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       133 ~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e  166 (168)
                      +++|+++..++...+ +++.++|+|||||.|+|+|
T Consensus        80 ~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          80 EAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            999999886666444 5699999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.85  E-value=1.1e-19  Score=128.68  Aligned_cols=111  Identities=18%  Similarity=0.176  Sum_probs=87.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cEEEEEeCCeEEEEEeCCCCCc-------ccCCCeEEEEEEeCCH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RWAELQSGPLKLALMQSPSDHV-------VQNGNSSLLSFTVTDI  125 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~~~~~~~~~i~l~~~~~~~~-------~~~~~~~~~~~~v~dl  125 (168)
                      ++|+.|.|+|+++|++||+++|||++.....    .+..+..++..+.+........       .......|++|.|+|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dv   80 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDA   80 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCH
Confidence            5899999999999999999999999877533    2344555677777765322111       1233456899999999


Q ss_pred             HHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++.+++|+++|+++..++...++| +.++++|||||.|||+|.
T Consensus        81 da~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~  123 (136)
T cd08342          81 AAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDR  123 (136)
T ss_pred             HHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEec
Confidence            999999999999998888775556 899999999999999985

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=7.9e-20  Score=126.40  Aligned_cols=111  Identities=23%  Similarity=0.280  Sum_probs=81.6

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeC-----CCCCcccCCCeEEEEEEeCCHHHHHH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQS-----PSDHVVQNGNSSLLSFTVTDINSAVT  130 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~-----~~~~~~~~~~~~~~~~~v~dl~~~~~  130 (168)
                      ++.++.|.|+|+++|++||+++|||++....+.+..+. ++..+.+...     ........+...+++|.|+|++++++
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd~~~~   80 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFGENVTFE-GGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFDAFLD   80 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccCceEEEe-ccceeccchhhhccCCcccccccCCceEEEEEehhhHHHHH
Confidence            68899999999999999999999999876544444332 2223322111     01111223345689999999999999


Q ss_pred             HHHHCCC-eEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          131 KLMALGA-ELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~-~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++|+ ++..++...++| +.+||+|||||+|||.++
T Consensus        81 ~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          81 KLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999986 676666655555 899999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.84  E-value=2.1e-19  Score=125.37  Aligned_cols=114  Identities=23%  Similarity=0.304  Sum_probs=83.3

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----ccE-EEEEe-CCeEEEEEeCCCCC----cccCCCeEEEEEE
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----LRW-AELQS-GPLKLALMQSPSDH----VVQNGNSSLLSFT  121 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~~~-~~~~~-~~~~i~l~~~~~~~----~~~~~~~~~~~~~  121 (168)
                      ...+++|+.|.|+|+++|++||+++|||++....     ..| ..+.. ++..+.+...+.+.    .+......|++|.
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~   82 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFS   82 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEEE
Confidence            3467999999999999999999999999986431     123 22322 45566666533221    1122334689999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEe
Q 040429          122 VTDINSAVTKLMALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       122 v~dl~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++++++|+++|+++........ +.+++||+|||||.|||+|
T Consensus        83 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         83 VDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             eCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999764333333 3488999999999999997

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3.6e-19  Score=123.31  Aligned_cols=111  Identities=25%  Similarity=0.381  Sum_probs=85.4

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEeCCeEEEEEeCCC-----------CCcccCCCeEEEEEEeC
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQSGPLKLALMQSPS-----------DHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~~~~~i~l~~~~~-----------~~~~~~~~~~~~~~~v~  123 (168)
                      +.|+.|+|+|+++|++||+++|||++....  +.|..+..++..+.+.....           ......+...+++|.|+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   80 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFVTD   80 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCCcEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEEcC
Confidence            468999999999999999999999986542  35666665666666553221           01111223357999999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++++++|+++..++...++| +.++++|||||.|||++|
T Consensus        81 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          81 DVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             CHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999988777766666 788999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.83  E-value=1.7e-19  Score=129.07  Aligned_cols=109  Identities=17%  Similarity=0.281  Sum_probs=81.2

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec---cc---EEEEE---eCCeEEEEEeCCCCCcccCCCeEEEEEEe
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT---LR---WAELQ---SGPLKLALMQSPSDHVVQNGNSSLLSFTV  122 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~~---~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~~~~~v  122 (168)
                      |...+++|+.|.|+|+++|++||+++|||++....   ..   ...+.   ...+.+.+...+      .+...|++|.|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~h~~~~~~~~------~~~~~Hiaf~v   75 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKPHDIAFVGGP------DGKLHHFSFFL   75 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCcceEEEecCC------CCCceEEEEEc
Confidence            34478999999999999999999999999976552   11   12221   234566554332      23456899999


Q ss_pred             CCHHHH---HHHHHHCCCeEe-ccceeeC-CeEEEEEECCCCCEEEEEe
Q 040429          123 TDINSA---VTKLMALGAELD-GSIKYEI-HGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       123 ~dl~~~---~~~l~~~G~~~~-~~~~~~~-~g~~~~~~DPdGn~iel~e  166 (168)
                      +|++++   .++|+++|+++. ++.+++. .++++||.|||||.|||++
T Consensus        76 ~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          76 ESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            998885   568999999875 6666664 3588999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.83  E-value=4.8e-19  Score=125.89  Aligned_cols=113  Identities=16%  Similarity=0.114  Sum_probs=89.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCc-ccCCCeEEEEEEeC--CHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHV-VQNGNSSLLSFTVT--DINSAVTK  131 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~v~--dl~~~~~~  131 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+..+.+..++..+.+...+.... ...+...|++|.++  |+++++++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dv~~~~~~   82 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGRKTAYFDLNGLWIALNEEKDIPRNEIHQSYTHIAFSIEEEDFDHWYQR   82 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecCeeEEEecCCeEEEeeccCCCCCccCCCCeeEEEEEecHHHHHHHHHH
Confidence            5799999999999999999999999999877666777777777787765432211 11233457888886  99999999


Q ss_pred             HHHCCCeEeccc-eeeCCeEEEEEECCCCCEEEEEee
Q 040429          132 LMALGAELDGSI-KYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       132 l~~~G~~~~~~~-~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++...+ ...++++.+||.|||||+|||.+.
T Consensus        83 l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         83 LKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             HHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            999999986433 455566999999999999999875

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.82  E-value=4.7e-19  Score=124.86  Aligned_cols=111  Identities=19%  Similarity=0.143  Sum_probs=87.0

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCC-cccCCCeEEEEEEeC--CHHHHHHHHH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDH-VVQNGNSSLLSFTVT--DINSAVTKLM  133 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~v~--dl~~~~~~l~  133 (168)
                      |+||.|.|+|++++++||+++|||++....+..+.+..++..+.+...+... ....+...|++|.++  |+++++++|+
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dld~~~~~l~   80 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGEKTAYFTIGGTWLALNEEPDIPRNEIRQSYTHIAFTIEDSEFDAFYTRLK   80 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCCccceEeeCceEEEEEccCCCCcCCcCccceEEEEEecHHHHHHHHHHHH
Confidence            6899999999999999999999999887666556666777788776544321 111234567999886  4999999999


Q ss_pred             HCCCeEeccce-eeCCeEEEEEECCCCCEEEEEee
Q 040429          134 ALGAELDGSIK-YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       134 ~~G~~~~~~~~-~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+.+..++. ..++++.+||+|||||+|||+++
T Consensus        81 ~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~  115 (131)
T cd08363          81 EAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTG  115 (131)
T ss_pred             HcCCcccCCCccccCcceEEEEECCCCCEEEEecC
Confidence            99999764433 44456899999999999999875

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.3e-18  Score=120.63  Aligned_cols=112  Identities=19%  Similarity=0.230  Sum_probs=87.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC--eEEEEEeCCCCC--cccCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP--LKLALMQSPSDH--VVQNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~--~~i~l~~~~~~~--~~~~~~~~~~~~~v~---dl~~  127 (168)
                      ++++|+.|.|+|++++++||+++|||++....+.+..+..++  +.|.+...+...  ........|++|.+.   ++++
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~~~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~~~~v~~   80 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTDSTAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFAILLPSRADLAA   80 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCCCEEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEEEECCCHHHHHH
Confidence            378999999999999999999999999998876777776654  677777655421  122334568999986   5899


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++.++|+.+.++... ..++.+||.|||||++||+..
T Consensus        81 ~~~~l~~~g~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          81 ALRRLIELGIPLVGASDH-LVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             HHHHHHHcCCceeccccc-cceeEEEEECCCCCEEEEEEe
Confidence            999999999987655433 334789999999999999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=8.9e-19  Score=120.53  Aligned_cols=108  Identities=22%  Similarity=0.358  Sum_probs=84.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC--eEEEEEeCCCCC-----cccCCCeEEEEEEeCCHHHHHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP--LKLALMQSPSDH-----VVQNGNSSLLSFTVTDINSAVTK  131 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~--~~i~l~~~~~~~-----~~~~~~~~~~~~~v~dl~~~~~~  131 (168)
                      +.+|.|+|+++|++||+++|||++....+.+..+..++  ..+.+.......     ....+...+++|.++|+++++++
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~did~~~~~   83 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSDWYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDVDAEYER   83 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccCcEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCHHHHHHH
Confidence            56899999999999999999999988766777776543  455555433221     11233445799999999999999


Q ss_pred             HHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          132 LMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       132 l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ++++|+++..++...++| +.++++|||||.|||+|
T Consensus        84 l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          84 LKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            999999887666654555 89999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.82  E-value=1.1e-18  Score=118.35  Aligned_cols=106  Identities=25%  Similarity=0.323  Sum_probs=85.9

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCe
Q 040429           61 LQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus        61 ~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      +|.|+|+++|++||+++|||++....  ..|+.+..++..+.+...+...........+++|.++|++++++++.++|+.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~   82 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPEPGYAFLSRGGAQLMLSEHDGDEPVPLGRGGSVYIEVEDVDALYAELKAKGAD   82 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCCCcEEEEEeCCEEEEEeccCCCCCCCCCCcEEEEEEeCCHHHHHHHHHHcCCc
Confidence            68999999999999999999988775  5687777788888887665433222334457999999999999999999998


Q ss_pred             -EeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          139 -LDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       139 -~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                       +..++....+| +.++++||+||.|||+|
T Consensus        83 ~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          83 LIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             ceecCccCCCcccEEEEEECCCCCEEEecC
Confidence             55555544555 89999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.81  E-value=1.1e-18  Score=120.79  Aligned_cols=106  Identities=18%  Similarity=0.220  Sum_probs=83.2

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEecc-cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCe
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVCTL-RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~~~-~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      ..|.|+|+++|++||++ |||++....+ .|+.+..++..+.|...+....  .....+++|.++|+++++++|+++|+.
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~~~v~dvd~~~~~l~~~G~~   82 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAAGYMILRRGDLELHFFAHPDLDP--ATSPFGCCLRLPDVAALHAEFRAAGLP   82 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCCCEEEEEcCCEEEEEEecCcCCC--CCCcceEEEEeCCHHHHHHHHHHhCcc
Confidence            57999999999999999 9999988766 6888877888888876542211  112346889999999999999999997


Q ss_pred             Ee-------ccceee-CCeEEEEEECCCCCEEEEEeeC
Q 040429          139 LD-------GSIKYE-IHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       139 ~~-------~~~~~~-~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +.       .++... ++++.++|+|||||.|||.|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~~  120 (120)
T cd08350          83 ETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQPV  120 (120)
T ss_pred             ccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecCC
Confidence            42       233333 4448999999999999999873

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.81  E-value=1.3e-18  Score=121.00  Aligned_cols=108  Identities=16%  Similarity=0.190  Sum_probs=82.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-CCeEEEEEeCCCCCcccCCCeEEEEEEeC--CHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-GPLKLALMQSPSDHVVQNGNSSLLSFTVT--DINSAVTK  131 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~~~~~~~~~v~--dl~~~~~~  131 (168)
                      .+++|+.|.|+|+++|++||+++|||++......++.+.. ++..+.+...+.     .....|++|.++  |+++++++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~h~a~~v~~~dl~~~~~~   77 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFGPFAVVKLDNGVSLDFAQPDG-----EIPPQHYAFLVSEEEFDRIFAR   77 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccCCEEEEEcCCCcEEEEecCCC-----CCCcceEEEEeCHHHHHHHHHH
Confidence            7899999999999999999999999998875544544443 445666654321     122346777775  79999999


Q ss_pred             HHHCCCeEecccee--------eCCeEEEEEECCCCCEEEEEee
Q 040429          132 LMALGAELDGSIKY--------EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       132 l~~~G~~~~~~~~~--------~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |+++|+++...+..        .++++.+||+|||||.|||++.
T Consensus        78 l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          78 IRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            99999997654432        2455999999999999999874

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.7e-18  Score=119.31  Aligned_cols=112  Identities=18%  Similarity=0.161  Sum_probs=86.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--cEEEEEeCCeEEEEEeCCCCC----cccCCCeEEEEEEeCC-HHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--RWAELQSGPLKLALMQSPSDH----VVQNGNSSLLSFTVTD-INS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~~~~~~~~~~~i~l~~~~~~~----~~~~~~~~~~~~~v~d-l~~  127 (168)
                      .+++|+.|.|+|++++++||+++|||++....+  .+..+..++..+.+.......    ........|++|.+++ +++
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~~~~~~   81 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKALRFGSQKINLHPVGGEFEPAAGSPGPGSDDLCLITEPPIDE   81 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccCCceEEEeCCEEEEEecCCCccCcCccCCCCCCceEEEEecccHHH
Confidence            478999999999999999999999999988755  666677677777776543221    1112234579999964 999


Q ss_pred             HHHHHHHCCCeEecccee--e--CCeEEEEEECCCCCEEEEEe
Q 040429          128 AVTKLMALGAELDGSIKY--E--IHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~--~--~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++++|.++|+++...+..  +  +.++.+||+|||||+||+.+
T Consensus        82 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          82 LVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             HHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            999999999987654432  1  23478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.4e-18  Score=118.51  Aligned_cols=108  Identities=27%  Similarity=0.356  Sum_probs=84.2

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEEEeC---CeEEEEEeCCCCC---cccCCCeEEEEEEeCCHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAELQSG---PLKLALMQSPSDH---VVQNGNSSLLSFTVTDINS  127 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~~~---~~~i~l~~~~~~~---~~~~~~~~~~~~~v~dl~~  127 (168)
                      |+.|.|+|++++++||+++|||++..+..     .|..+...   +..+.+...+...   ....+...+++|.++|+++
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di~~   80 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDIDA   80 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHHHH
Confidence            78999999999999999999999987642     34444332   4566666544332   1223455689999999999


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++++|+++|+++..++....+++.+|++|||||+|||+|
T Consensus        81 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          81 TYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            999999999998877755556799999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.81  E-value=1.9e-18  Score=121.75  Aligned_cols=110  Identities=19%  Similarity=0.258  Sum_probs=82.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEeccc--E-----EEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC--CH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR--W-----AELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT--DI  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~--~-----~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~--dl  125 (168)
                      .+++|+.|.|+|+++|++||+++|||++......  +     ..+..++..+.+.....+   ..+...|++|.++  |+
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~---~~~~~~Hiaf~v~~~~l   79 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL---QERTYNHIAFKISDSDV   79 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC---CCCCceEEEEEcCHHHH
Confidence            5799999999999999999999999987665321  1     122335667777643322   1223568999997  79


Q ss_pred             HHHHHHHHHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++.++|+++|+.+..+....+ .++.+||+|||||.|||..+
T Consensus        80 d~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          80 DEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             HHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            9999999999998764433233 46999999999999999875

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=7.8e-19  Score=118.53  Aligned_cols=108  Identities=19%  Similarity=0.197  Sum_probs=83.1

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc---cEEEEEeCC-eEEEEEeCCCCCc--ccCCCeEEEEEEeCCHHHHHH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL---RWAELQSGP-LKLALMQSPSDHV--VQNGNSSLLSFTVTDINSAVT  130 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---~~~~~~~~~-~~i~l~~~~~~~~--~~~~~~~~~~~~v~dl~~~~~  130 (168)
                      |+|+.|.|+|++++++||+++|||++.....   ....+..++ ..+.+...+....  ...+...+++|.++|++++++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~   80 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRVDDLDAFRA   80 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEeCCHHHHHH
Confidence            6899999999999999999999999876532   223344433 3677776554321  123345689999999999999


Q ss_pred             HHHHCCCeEeccceeeCCeEEEEEECCCCCEEEE
Q 040429          131 KLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGL  164 (168)
Q Consensus       131 ~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel  164 (168)
                      +++++|+.+..++...++++.+||.|||||.|||
T Consensus        81 ~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          81 RLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999987665554556889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.6e-18  Score=123.05  Aligned_cols=112  Identities=23%  Similarity=0.286  Sum_probs=83.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc---c--------------EEEEEe--CCeEEEEEeCCCCC-------
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL---R--------------WAELQS--GPLKLALMQSPSDH-------  108 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---~--------------~~~~~~--~~~~i~l~~~~~~~-------  108 (168)
                      .+++|+.|.|+|+++|++||++ |||++.....   .              +..+..  ++..|.|.....+.       
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~   80 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRP   80 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCC
Confidence            4799999999999999999999 9998765421   1              122222  45677776532211       


Q ss_pred             -cccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          109 -VVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       109 -~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                       .....+..|++|.|+|+++.+++|+++|+++..++....++ +.+||+|||||.|||+|.
T Consensus        81 ~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          81 APVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             11123355899999999999999999999988766544445 889999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.80  E-value=2e-18  Score=119.53  Aligned_cols=107  Identities=17%  Similarity=0.194  Sum_probs=80.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec-ccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-LRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DIN  126 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~  126 (168)
                      .+++|+.|.|+|+++|++||+++|||++.... +..+.+..    +++.+.+....      .....|++|.+.   |++
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~hiaf~v~~~~dv~   76 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQGRVYLKAWDEFDHHSIVLREAD------TAGLDFMGFKVLDDADLE   76 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCCceEEEEccCCCcccEEEeccCC------CCCeeEEEEEeCCHHHHH
Confidence            68999999999999999999999999987764 33444432    23555553221      123457999996   899


Q ss_pred             HHHHHHHHCCCeEeccce-eeC-CeEEEEEECCCCCEEEEEee
Q 040429          127 SAVTKLMALGAELDGSIK-YEI-HGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       127 ~~~~~l~~~G~~~~~~~~-~~~-~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++|+++|+++...+. ..+ .++.+||+|||||+|||++.
T Consensus        77 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          77 KLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             HHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            999999999999764332 233 35889999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.5e-18  Score=119.81  Aligned_cols=110  Identities=18%  Similarity=0.159  Sum_probs=80.0

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe--c--cc--EEEEEe-CCeEEEEEeCCCCCc----ccCCCeEEEEEEeC-
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC--T--LR--WAELQS-GPLKLALMQSPSDHV----VQNGNSSLLSFTVT-  123 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~--~~--~~~~~~-~~~~i~l~~~~~~~~----~~~~~~~~~~~~v~-  123 (168)
                      +++|+.|.|+|+++|++||+++|||+....  .  ..  ...+.. ++..+.+.+.+....    ...+...|++|.|+ 
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~~   80 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVGS   80 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECCC
Confidence            578999999999999999999999997543  1  11  112222 456777775433211    12234568999995 


Q ss_pred             --CHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          124 --DINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       124 --dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                        |+++++++|+++|+++..++.....| +.++++|||||.|||.
T Consensus        81 ~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          81 KEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             HHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence              58999999999999988766544455 5678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.80  E-value=3.8e-18  Score=124.00  Aligned_cols=111  Identities=18%  Similarity=0.200  Sum_probs=85.5

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-C---CeEEEEEeCCCCC--cccCCCeEEEEEEeCC---HH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-G---PLKLALMQSPSDH--VVQNGNSSLLSFTVTD---IN  126 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~---~~~i~l~~~~~~~--~~~~~~~~~~~~~v~d---l~  126 (168)
                      .++|+.|.|+|+++|.+||+++|||++.........+.. +   ++.|++.+.+...  ....+...|++|.|+|   ++
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d~~dvd   80 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPDDEELE   80 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEEEECCCHHHHH
Confidence            378999999999999999999999999876554444433 3   7889988754321  1223455689999988   89


Q ss_pred             HHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          127 SAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       127 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++|+++|+.+..+ ....+++.+||+|||||.|||+..
T Consensus        81 ~~~~~L~~~Gv~~~~~-~~~~~~~s~yf~DPdG~~iEl~~~  120 (157)
T cd08347          81 AWKERLEALGLPVSGI-VDRFYFKSLYFREPGGILFEIATD  120 (157)
T ss_pred             HHHHHHHHCCCCcccc-cccccEEEEEEECCCCcEEEEEEC
Confidence            9999999999986443 333345889999999999999874

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.80  E-value=3.2e-18  Score=118.48  Aligned_cols=110  Identities=20%  Similarity=0.226  Sum_probs=82.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---C
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---D  124 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---d  124 (168)
                      |...+++|+.|.|+|+++|.+||+++|||++....+..+.+..    .++.+.+...+      .....|++|.++   +
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~------~~~~~h~af~v~~~~~   75 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREGQSVYLRAWGDYEHHSLKLTESP------EAGLGHIAWRASSPEA   75 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecCCeEEEEeccCCCccEEEEeeCC------CCceEEEEEEcCCHHH
Confidence            3446899999999999999999999999999887655555543    23556554432      123457999986   6


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++++++|+++.........+..+||+|||||.+|++..
T Consensus        76 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          76 LERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             HHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            8888999999999864322223456789999999999999854

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.8e-18  Score=118.88  Aligned_cols=103  Identities=18%  Similarity=0.210  Sum_probs=81.1

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCeE
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAEL  139 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~  139 (168)
                      ..|+|+|+++|++||++ |||++....+.++.+..++..+.+.......   .....+++|.|+|+++++++|+++|+++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~~~~~l~~~~~~l~l~~~~~~~---~~~~~~~~~~v~did~~~~~l~~~G~~~   80 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWENDNLAYFRLGNCAFYLQDYYVKD---WAENSMLHLEVDDLEAYYEHIKALGLPK   80 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCCCEEEEEcCCEEEEeecCCCcc---cccCCEEEEEECCHHHHHHHHHHcCCcc
Confidence            47899999999999998 9999998887888888888888775532221   1223468899999999999999999864


Q ss_pred             e------ccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          140 D------GSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       140 ~------~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      .      .+....++++.++|+|||||+|+|.|
T Consensus        81 ~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          81 KFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             cccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            2      22223444599999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=8.5e-18  Score=128.16  Aligned_cols=118  Identities=15%  Similarity=0.161  Sum_probs=88.8

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--cE--EEEEe------------------C-CeEEEEEeC
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--RW--AELQS------------------G-PLKLALMQS  104 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--~~--~~~~~------------------~-~~~i~l~~~  104 (168)
                      .......++|+.|.|+|+++|++||+++|||++....  +  .+  ..+..                  + +..|.|...
T Consensus        69 ~~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n  148 (233)
T PLN02367         69 EATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHN  148 (233)
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecC
Confidence            3333478999999999999999999999999987752  1  12  22211                  1 346777654


Q ss_pred             CCCCc------cc-----CCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          105 PSDHV------VQ-----NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       105 ~~~~~------~~-----~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .+...      -+     +.+..|++|.|+|+++.+++|+++|+.+..++..+.+.+.+|++|||||+|||+|+
T Consensus       149 ~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~  222 (233)
T PLN02367        149 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDL  222 (233)
T ss_pred             CCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEec
Confidence            33210      01     13567899999999999999999999998777766666788999999999999986

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=4.3e-18  Score=116.12  Aligned_cols=105  Identities=20%  Similarity=0.156  Sum_probs=80.5

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe---CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCC
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS---GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALG  136 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~---~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G  136 (168)
                      .+|.|+|+++|++||+++|||++.........+..   +++.+.+...+..    .....+++|.++|+++++++|+++|
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~v~d~~~~~~~l~~~G   79 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDHGWIATFASPQNMTVQVSLATEGGT----ATVVPDLSIEVDDVDAALARAVAAG   79 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcCCceEEEeecCCCCcEEEEecCCCC----CCCCCEEEEEeCCHHHHHHHHHhcC
Confidence            47899999999999999999998764333333433   2566776643321    1223479999999999999999999


Q ss_pred             CeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          137 AELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       137 ~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      +.+..++....+| +.+|+.|||||.|+|++++
T Consensus        80 ~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~~  112 (112)
T cd07238          80 FAIVYGPTDEPWGVRRFFVRDPFGKLVNILTHR  112 (112)
T ss_pred             CeEecCCccCCCceEEEEEECCCCCEEEEEEcC
Confidence            9987666544455 8999999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.80  E-value=3.7e-18  Score=119.05  Aligned_cols=106  Identities=20%  Similarity=0.227  Sum_probs=80.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~  129 (168)
                      .+|.|+.|.|+|+++|.+||+++|||++....+..+.+..  .++.+++....       ....+++|.++|   +++++
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~i~l~~~~-------~~~~~iaf~v~~~~dv~~~~   77 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTAKATYFRSDARDHTLVYIEGD-------PAEQASGFELRDDDALESAA   77 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCCCeEEEEcCCccEEEEEEeCC-------CceEEEEEEECCHHHHHHHH
Confidence            6899999999999999999999999998776554444444  35666765432       123468999975   99999


Q ss_pred             HHHHHCCCeEeccce----eeCCeEEEEEECCCCCEEEEEee
Q 040429          130 TKLMALGAELDGSIK----YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~----~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++...+.    ....++++||+|||||.||++..
T Consensus        78 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~  119 (124)
T cd08361          78 TELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVR  119 (124)
T ss_pred             HHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEe
Confidence            999999998754322    12234788999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.80  E-value=3.1e-18  Score=118.71  Aligned_cols=108  Identities=24%  Similarity=0.212  Sum_probs=82.6

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe--CCHHHHHHHHH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV--TDINSAVTKLM  133 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl~~~~~~l~  133 (168)
                      +++|+.|.|+|++++++||+++|||++....+....+..++..+.+...+..  +..+...+++|.+  +|+++++++++
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~hi~f~v~~~dl~~~~~~l~   78 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWDKGAYLEAGDLWLCLSVDANV--GPAKDYTHYAFSVSEEDFASLKEKLR   78 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecCCceEEecCCEEEEEecCCCC--CCCCCeeeEEEEeCHHHHHHHHHHHH
Confidence            4789999999999999999999999988765555555556666665433322  1123345788887  68999999999


Q ss_pred             HCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          134 ALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       134 ~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++..++..  .++.+||.|||||.|||++.
T Consensus        79 ~~G~~~~~~~~~--~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          79 QAGVKEWKENTS--EGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HcCCcccCCCCC--CccEEEEECCCCCEEEEEeC
Confidence            999987654332  35789999999999999874

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.80  E-value=3.2e-18  Score=118.38  Aligned_cols=108  Identities=19%  Similarity=0.219  Sum_probs=80.4

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc--cEEEEEeC-CeEEEEEeCCC-----C-CcccCCCeEEEEEEe---CC
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL--RWAELQSG-PLKLALMQSPS-----D-HVVQNGNSSLLSFTV---TD  124 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~~~~~~~~-~~~i~l~~~~~-----~-~~~~~~~~~~~~~~v---~d  124 (168)
                      ++|+.|.|+|+++|++||+. |||++.....  .++.+..+ +..+.+.....     + ..+..+...+++|.+   +|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d   79 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCETPAE   79 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCCHHH
Confidence            57999999999999999976 9999876543  46666554 56666543211     1 111223345677876   48


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                      +++++++|+++|+++..++...++| +.++|+|||||.|||+
T Consensus        80 vd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          80 VDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            9999999999999887776655556 8899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.79  E-value=5.9e-18  Score=114.32  Aligned_cols=103  Identities=23%  Similarity=0.306  Sum_probs=79.7

Q ss_pred             EEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCe----EEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCC
Q 040429           62 QLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPL----KLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGA  137 (168)
Q Consensus        62 l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~----~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~  137 (168)
                      |+|+|+++|++||+++|||++....+.+..+..+..    ...+.+.+.. ........+++|.|+|+++++++++++|+
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~dv~~~~~~l~~~G~   79 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPDYVDFSLGFRFHDGVIEFLQFPDP-PGPPGGGFHLCFEVEDVDALYERLKELGA   79 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETSEEEEEETEEEEEEEEEEEEEESS-SSSSSSEEEEEEEESHHHHHHHHHHHTTS
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCCeEEEEeccchhhhhHHHccCCcc-ccCCCceeEEEEEEcCHHHHHHHHHHCCC
Confidence            789999999999999999999998777777776421    1223332222 22244566899999999999999999999


Q ss_pred             eEeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          138 ELDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       138 ~~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                      ++..++...++| +.+++.|||||.|||+
T Consensus        80 ~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   80 EIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             EEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             eEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            988777766666 9999999999999996

...

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=3.9e-18  Score=116.59  Aligned_cols=107  Identities=23%  Similarity=0.224  Sum_probs=85.8

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-CCeEEEEEeCCCCCc--ccCCCeEEEEEEeCC---HHHHHHHHH
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-GPLKLALMQSPSDHV--VQNGNSSLLSFTVTD---INSAVTKLM  133 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~--~~~~~~~~~~~~v~d---l~~~~~~l~  133 (168)
                      +.|.|+|+++|++||+++|||++....+.++.+.. ++..+.+...+....  ...+...+++|.+++   ++++++++.
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   81 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSPTFALFVLGSGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAAVDALYAEWQ   81 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCCceEEEEeCCCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHHHHHHHHHHH
Confidence            67999999999999999999998877666777765 567777776554321  123345679999975   888999999


Q ss_pred             HCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          134 ALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       134 ~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++..++...++|+.++|+|||||.|||+.
T Consensus        82 ~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          82 AKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            999998877776677788999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=7.1e-18  Score=116.16  Aligned_cols=112  Identities=29%  Similarity=0.329  Sum_probs=84.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----ccEEE-EEe-CCeEEEEEeCCCCC----cccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----LRWAE-LQS-GPLKLALMQSPSDH----VVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~~~~~-~~~-~~~~i~l~~~~~~~----~~~~~~~~~~~~~v~  123 (168)
                      .+++|+.|.|+|+++|++||+++|||++....     ..|.. +.. ++..+.+...+...    .+......|++|.++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v~   81 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSVE   81 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEeC
Confidence            47899999999999999999999999987652     13432 222 55566665433221    111234468999999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      |+++++++|+++|+.+...+.....| +++|++||+||.|||+|
T Consensus        82 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          82 DIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999999999999977655554555 78999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=2.9e-18  Score=118.59  Aligned_cols=108  Identities=15%  Similarity=0.116  Sum_probs=79.0

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCC-----Cc---ccCCCeEE--EEEEeCCHHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD-----HV---VQNGNSSL--LSFTVTDINSA  128 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~---~~~~~~~~--~~~~v~dl~~~  128 (168)
                      |+.|.|+|+++|++||+++|||++....+.|+.+..+++.+.+......     ..   .......|  +++.++|++++
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dv~~~   81 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSETWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEEFDAL   81 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccCCcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHHHHHH
Confidence            8999999999999999999999998766667766666666666543211     00   00111223  45567999999


Q ss_pred             HHHHHHCCCeEeccceee-----CCeEEEEEECCCCCEEEEEe
Q 040429          129 VTKLMALGAELDGSIKYE-----IHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~-----~~g~~~~~~DPdGn~iel~e  166 (168)
                      +++|+++|+++..++...     ..++.+||+|||||.|||..
T Consensus        82 ~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          82 AERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            999999999987554321     12388999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.1e-17  Score=115.68  Aligned_cols=108  Identities=17%  Similarity=0.180  Sum_probs=83.7

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEec---c---cEEEEEeCCeEEEEEeCCCCCc-----ccCCCeEEEEEEeCCHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCT---L---RWAELQSGPLKLALMQSPSDHV-----VQNGNSSLLSFTVTDINS  127 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~---~~~~~~~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~v~dl~~  127 (168)
                      +..|+|+|+++|++||+++|||++....   +   .++.+..++..+.+........     ...+...+++|.|+|+++
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHH
Confidence            3579999999999999999999998653   1   1455666666676654432211     122345579999999999


Q ss_pred             HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          128 AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ++++|+++|+++..++...++| +.++++|||||+|+|.+
T Consensus        82 ~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          82 HYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence            9999999999988787766666 88999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.79  E-value=4e-18  Score=135.57  Aligned_cols=149  Identities=19%  Similarity=0.184  Sum_probs=99.2

Q ss_pred             CCceeeeEEeeecCcceeeecchhccccccc---hhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec
Q 040429           10 APREVRIRVLHSLSGSLVKSSARLSKVHKRD---EVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT   86 (168)
Q Consensus        10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~   86 (168)
                      -++.+  .+ .+|+|..+|+.+.........   .........+.|...+|+||.|.|+|+++|++||+++|||++....
T Consensus        99 ~g~~~--~~-~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~  175 (303)
T TIGR03211        99 VGRRV--RF-TLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQV  175 (303)
T ss_pred             cceEE--EE-ECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeE
Confidence            34554  33 778999999988766432100   0001111234565678999999999999999999999999986542


Q ss_pred             ----cc--EEEE-Ee--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCCeEec-cceeeC-CeEEE
Q 040429           87 ----LR--WAEL-QS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGAELDG-SIKYEI-HGKVA  152 (168)
Q Consensus        87 ----~~--~~~~-~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~~~~~-~~~~~~-~g~~~  152 (168)
                          ..  ...+ ..  +.+.+.+...+     ..+...|++|.|+|+++   .+++|+++|+++.. +.+++. .++++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~  250 (303)
T TIGR03211       176 VLGDGKEQAAAWLSVSNKAHDIAFVGDP-----EPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTI  250 (303)
T ss_pred             EcCCCcEEEEEEEEcCCCCcccceecCC-----CCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEE
Confidence                11  2222 12  33445444322     23446789999987555   66789999999764 444554 35899


Q ss_pred             EEECCCCCEEEEEe
Q 040429          153 AMRCIDGHMLGLYE  166 (168)
Q Consensus       153 ~~~DPdGn~iel~e  166 (168)
                      ||+|||||+|||+.
T Consensus       251 y~~DPdG~~iEl~~  264 (303)
T TIGR03211       251 YFFDPSGNRNETFG  264 (303)
T ss_pred             EEECCCCCEEEEec
Confidence            99999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.79  E-value=3.1e-18  Score=116.67  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=83.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe--CCHHHHHHHHHHCC
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV--TDINSAVTKLMALG  136 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl~~~~~~l~~~G  136 (168)
                      |+.|.|+|+++|++||+++|||++....+....+..++..+.+...+.... ..+...|++|.+  +|+++++++++++|
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~hiaf~v~~~d~~~~~~~l~~~G   79 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSKEAYFELAGLWICLMEEDSLQG-PERTYTHIAFQIQSEEFDEYTERLKALG   79 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCceeEEEecCeEEEeccCCCcCC-CCCCccEEEEEcCHHHHHHHHHHHHHcC
Confidence            789999999999999999999999877665555666677777655433221 123445789988  57999999999999


Q ss_pred             CeEeccce-eeCCeEEEEEECCCCCEEEEEee
Q 040429          137 AELDGSIK-YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       137 ~~~~~~~~-~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++..+.. ..++++.+|++|||||+|||++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          80 VEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             CccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            99764433 33456899999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.79  E-value=6.2e-18  Score=116.31  Aligned_cols=109  Identities=20%  Similarity=0.201  Sum_probs=81.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--cE--EEEEe----CCeEEEEEeCCCC-C-cccCCCeEEEEEEeCC
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--RW--AELQS----GPLKLALMQSPSD-H-VVQNGNSSLLSFTVTD  124 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--~~--~~~~~----~~~~i~l~~~~~~-~-~~~~~~~~~~~~~v~d  124 (168)
                      ++|+.|.|+|+++|++||+++|||++....  +  .+  +.+..    +++.+.+...... . ........+++|.++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            579999999999999999999999987642  1  22  23332    2456666543222 1 1112345689999999


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                      +++++++++++|+.+..++.....++.+||+|||||++||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            99999999999999887666555558899999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.1e-17  Score=115.17  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEEEeCCeEEEEEeCCCC---CcccCCCeEEEEEEeCCHHHHHH
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAELQSGPLKLALMQSPSD---HVVQNGNSSLLSFTVTDINSAVT  130 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~~~~~~~i~l~~~~~~---~~~~~~~~~~~~~~v~dl~~~~~  130 (168)
                      +.|.|+|+++|.+||+++|||++.....      .++.+..++..+.+......   .....+...+++|.++|++++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~   84 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDATFA   84 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEEEEEeCCHHHHHH
Confidence            4689999999999999999999876531      35556667777777653221   11223445689999999999999


Q ss_pred             HHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          131 KLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++.+.|+++..++...++| +.++++|||||.|+|.|.
T Consensus        85 ~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          85 RAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHCCCeEecCcccccccceEEEEECCCCCEEEEecC
Confidence            9999999988777655555 899999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.79  E-value=5.8e-18  Score=133.75  Aligned_cols=144  Identities=17%  Similarity=0.099  Sum_probs=96.6

Q ss_pred             eEEeeecCcceeeecchhccccccchhhhc-cccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec----c-c-
Q 040429           16 IRVLHSLSGSLVKSSARLSKVHKRDEVRER-ERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----L-R-   88 (168)
Q Consensus        16 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~-~-   88 (168)
                      +.+ .+|+|..+|++++......+...... .... .....+|+||.|.|+|+++|.+||+++|||++....    + . 
T Consensus       103 ~~f-~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~  180 (286)
T TIGR03213       103 IKF-TDPGGNPLEIYYGAVEDFEKPFVSPRAVSGF-VTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGV  180 (286)
T ss_pred             EEE-ECCCCCEEEEEEcccccCCCCCCCCCCCCcc-ccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCC
Confidence            444 77899999988865433111100000 0000 112368999999999999999999999999987641    1 1 


Q ss_pred             ---EEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCCeEeccceeeCCe-EEEEEECCCC
Q 040429           89 ---WAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDG  159 (168)
Q Consensus        89 ---~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG  159 (168)
                         ...+..  .++.+++...+.     .+..+|++|.|+|+++   ++++|+++|+...++.+++.++ +++|++||||
T Consensus       181 ~~~~~~l~~~~~~~~~~l~~~~~-----~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G  255 (286)
T TIGR03213       181 TVRPYFLHCNERHHSLAFAAGPS-----EKRLNHLMLEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSG  255 (286)
T ss_pred             cceEEEEEECCCcceEEEecCCC-----CCceEEEEEEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCC
Confidence               122222  455666654331     2345689999988777   7889999999544555555544 8999999999


Q ss_pred             CEEEEEe
Q 040429          160 HMLGLYE  166 (168)
Q Consensus       160 n~iel~e  166 (168)
                      |+||+..
T Consensus       256 ~~iE~~~  262 (286)
T TIGR03213       256 WLVEYGW  262 (286)
T ss_pred             cEEEeec
Confidence            9999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.79  E-value=7.3e-18  Score=115.30  Aligned_cols=107  Identities=22%  Similarity=0.269  Sum_probs=84.2

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC---CeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG---PLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~  128 (168)
                      ++++|+.|.|+|++++++||+++|||++....+..+.+..+   ++.+.+...+.      ....|++|.+.   +++++
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~h~~~~v~~~~~v~~~   74 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDAGSVYLRCSEDDHHSLVLTEGDE------PGVDALGFEVASEEDLEAL   74 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecCCeEEEecCCCCcEEEEEEeCCC------CCceeEEEEcCCHHHHHHH
Confidence            37899999999999999999999999999876655555543   45566655432      23457999996   68889


Q ss_pred             HHHHHHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEee
Q 040429          129 VTKLMALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e~  167 (168)
                      .++++++|+++...+...+ +++.+||.||+||.+|++..
T Consensus        75 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          75 AAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             HHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            9999999999876654344 45899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.79  E-value=6.1e-18  Score=123.45  Aligned_cols=113  Identities=17%  Similarity=0.217  Sum_probs=80.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEe----cc--------------------cEEEEEe-CCeEEEEEeCCCCCc
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVC----TL--------------------RWAELQS-GPLKLALMQSPSDHV  109 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~----~~--------------------~~~~~~~-~~~~i~l~~~~~~~~  109 (168)
                      .+++|+.|.|+|+++|++||+++|||++...    .+                    ..+.+.. ++..|.|...+....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            5799999999999999999999999987531    00                    1122222 345677776543221


Q ss_pred             cc------CCCeEEEEEEeCCHHHHHHHHHHCCCeEec-ccee---eC-CeEEEEEECCCCCEEEEEee
Q 040429          110 VQ------NGNSSLLSFTVTDINSAVTKLMALGAELDG-SIKY---EI-HGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       110 ~~------~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~-~~~~---~~-~g~~~~~~DPdGn~iel~e~  167 (168)
                      +.      ..+..|++|.++|+++++++|+++|+.+.. ++..   +. ..+++||+|||||.|||+++
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  151 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSH  151 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEc
Confidence            11      134568999999999999999999987543 2221   11 12789999999999999986

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.3e-17  Score=116.14  Aligned_cols=111  Identities=20%  Similarity=0.184  Sum_probs=85.1

Q ss_pred             cccEEEEEeCCHHHHHHHHHhcc---CCEEEEecc---cEEEEEeCCeEEEEEeCCCCCc----ccCCCeEEEEEEeC--
Q 040429           56 SFRWILQLHKDVPKAARFYSEGL---DFTVNVCTL---RWAELQSGPLKLALMQSPSDHV----VQNGNSSLLSFTVT--  123 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vL---Gf~~~~~~~---~~~~~~~~~~~i~l~~~~~~~~----~~~~~~~~~~~~v~--  123 (168)
                      +++|+.|.|+|++++++||+++|   ||++....+   .|... .++..+.+...+....    .......|++|.++  
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~~v~~~   79 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAG-DGGTYLVLQQADGESAGRHDRRNPGLHHLAFRAPSR   79 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeeccCceEEec-CCceEEEEEecccCCCcccccCCcCeeEEEEEcCCH
Confidence            47999999999999999999999   999887643   23322 3677788876554321    12233467999996  


Q ss_pred             -CHHHHHHHHHHCCCeEecccee----eCCeEEEEEECCCCCEEEEEee
Q 040429          124 -DINSAVTKLMALGAELDGSIKY----EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 -dl~~~~~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdGn~iel~e~  167 (168)
                       |+++++++|+++|+.+..++..    ..+++.+||+|||||++||+.|
T Consensus        80 ~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          80 EAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             HHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence             5889999999999998876553    2344899999999999999876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.78  E-value=3.9e-18  Score=118.43  Aligned_cols=111  Identities=21%  Similarity=0.275  Sum_probs=83.3

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEec---c---cEEEEEeCCeEEEEEeCCCCCc-------ccCCCeEEEEEEe
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCT---L---RWAELQSGPLKLALMQSPSDHV-------VQNGNSSLLSFTV  122 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~---~~~~~~~~~~~i~l~~~~~~~~-------~~~~~~~~~~~~v  122 (168)
                      +++|+.|.|+|+++|++||+++|||++....   +   ..+.+..++..+.|........       .......+++|.+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            5899999999999999999999999987542   1   2333445667777765322110       1123445899999


Q ss_pred             CCHHHHHHHHHHCCCeEec-cceeeCCe-EEEEE--ECCCCCEEEEEe
Q 040429          123 TDINSAVTKLMALGAELDG-SIKYEIHG-KVAAM--RCIDGHMLGLYE  166 (168)
Q Consensus       123 ~dl~~~~~~l~~~G~~~~~-~~~~~~~g-~~~~~--~DPdGn~iel~e  166 (168)
                      +|+++++++|.++|+++.. ++..+++| +.+|+  +|||||.||++|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999999999999875 35666666 55666  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.78  E-value=5.2e-18  Score=117.12  Aligned_cols=107  Identities=18%  Similarity=0.178  Sum_probs=83.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEe---CCHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTV---TDINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v---~dl~~  127 (168)
                      .+++|+.|.|+|++++++||+++|||++....+.++.+..    .++.+.+.+.+      .+...+++|.+   +|+++
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~hi~~~v~~~~dv~~   76 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDDDRIYLRGLEEFIHHSLVLTKAP------VAGLGHIAFRVRSEEDLDK   76 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCCCeEEEEecCCCceEEEEEeeCC------CCceeEEEEECCCHHHHHH
Confidence            5899999999999999999999999999877666666542    23556665432      12355788988   57888


Q ss_pred             HHHHHHHCCCeEecc-ceeeCC-eEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGS-IKYEIH-GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~-~~~~~~-g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++++|+++... ....++ ++.+|+.|||||+||++.+
T Consensus        77 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          77 AEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             HHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            999999999987643 334444 4889999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=9.4e-18  Score=115.57  Aligned_cols=111  Identities=19%  Similarity=0.259  Sum_probs=83.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEe-cccEEEEEeCC-eEEEEEeCCCCC-------cccCCCeEEEEEEe--CCH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVC-TLRWAELQSGP-LKLALMQSPSDH-------VVQNGNSSLLSFTV--TDI  125 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~-~~~~~~~~~~~-~~i~l~~~~~~~-------~~~~~~~~~~~~~v--~dl  125 (168)
                      +.++.|.|+|+++|++||+++|||++... .+.++.+..++ ..+.+.......       ........+++|.+  +|+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dl   80 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPAEEL   80 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCCCceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCHHHH
Confidence            35789999999999999999999999884 45666666654 555555432111       11122345688887  689


Q ss_pred             HHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++.++|+++..++...++++.+||.|||||.|||+++
T Consensus        81 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          81 AEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             HHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            999999999999887666545566899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.78  E-value=1.3e-17  Score=117.70  Aligned_cols=109  Identities=19%  Similarity=0.176  Sum_probs=82.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEeccc-EEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR-WAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~-~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~  129 (168)
                      .+++|+.|.|+|+++|++||+++|||++...... .+.+..    +++.+++...+..    .+...|++|.|+|++++.
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~g~~hiaf~v~d~~~~~   77 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKGRGAFLRAAGGGDHHNLFLIKTPAP----MAGFHHAAFEVGDIDEVM   77 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecCcEEEEECCCCCCCcEEEEecCCCC----CCcceEEEEEeCCHHHHH
Confidence            5799999999999999999999999998766432 333332    3467777654431    245668999999999887


Q ss_pred             H---HHHHCCCeEec-cceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          130 T---KLMALGAELDG-SIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~---~l~~~G~~~~~-~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +   +|.++|+++.. +.++..++ +++||+||+||.|||+..
T Consensus        78 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          78 LGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             HHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            4   99999998753 34444444 679999999999999853

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.78  E-value=2e-17  Score=116.23  Aligned_cols=111  Identities=19%  Similarity=0.213  Sum_probs=84.0

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecc--cEEEEEeC---CeEEEEEeCCCCC-cccCCCeEEEEEEeCCHH---
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--RWAELQSG---PLKLALMQSPSDH-VVQNGNSSLLSFTVTDIN---  126 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~~~~~~~~---~~~i~l~~~~~~~-~~~~~~~~~~~~~v~dl~---  126 (168)
                      +|+|+.|.|+|++++++||+++|||++....+  .+..+..+   ++.+.+...+... ....+...|++|.|+|++   
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~~~v~   80 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDSLDDLR   80 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHH
Confidence            58899999999999999999999999887655  55555443   5677777654331 122234557999998766   


Q ss_pred             HHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          127 SAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       127 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++|.++|+++..+... ..++.+||+|||||.|||+..
T Consensus        81 ~~~~~l~~~G~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~  120 (134)
T cd08348          81 DLYERLRAAGITPVWPVDH-GNAWSIYFRDPDGNRLELFVD  120 (134)
T ss_pred             HHHHHHHHCCCCccccCCC-CceeEEEEECCCCCEEEEEEc
Confidence            5778999999987655433 235889999999999999864

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.78  E-value=1.2e-17  Score=114.48  Aligned_cols=106  Identities=15%  Similarity=0.094  Sum_probs=78.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKL  132 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l  132 (168)
                      .+++|+.|.|+|+++|++||++ |||+.....+..+.+..+  .+.+.+.. ...    .+...+++|.|+|.+++.+.+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~af~v~~~~~~~~~~   75 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTDDELYYRGYGTDPFVYVAR-KGE----KARFVGAAFEAASRADLEKAA   75 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecCCeEEEecCCCccEEEEcc-cCC----cCcccEEEEEECCHHHHHHHH
Confidence            4789999999999999999999 999987765545545432  23333222 111    123457999999999999999


Q ss_pred             HHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          133 MALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       133 ~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      +++|+.....+...++++++||.|||||.|||+-
T Consensus        76 ~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          76 ALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             HcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            9999986644333344589999999999999974

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.77  E-value=1.5e-17  Score=119.22  Aligned_cols=107  Identities=16%  Similarity=0.214  Sum_probs=81.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEeccc-EEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHH--
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR-WAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAV--  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~-~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~--  129 (168)
                      .+++|+.|.|+|+++|++||+++|||++...... ...+..  +++.+++...+      .+...|++|.++|++++.  
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~l~~~~~~~~~~l~~~~------~~~~~hiaf~v~d~~~l~~~   76 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLGDQMAFLRCNSDHHSIAIARGP------HPSLNHVAFEMPSIDEVMRG   76 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeCCeEEEEECCCCcceEEEccCC------CCceEEEEEECCCHHHHHHH
Confidence            6899999999999999999999999998765432 222333  35667765432      233557999999988886  


Q ss_pred             -HHHHHCCCeEeccc-eeeCCe-EEEEEECCCCCEEEEEee
Q 040429          130 -TKLMALGAELDGSI-KYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 -~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                       ++|+++|+++..++ ++++++ +++||+||+||.|||++.
T Consensus        77 ~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~  117 (144)
T cd07239          77 IGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSE  117 (144)
T ss_pred             HHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccC
Confidence             79999999876443 345544 788999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.77  E-value=1.5e-17  Score=115.10  Aligned_cols=105  Identities=15%  Similarity=0.162  Sum_probs=78.7

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe-cccEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC-TLRWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~-~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      ++.|+.|.|+|+++|++||+++|||++... ....+.+..  .++.+++...+.      ....+++|.++   |+++++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~f~v~~~~dl~~~~   75 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPEDGALYLRMDDRAWRIAVHPGEA------DDLAYAGWEVADEAALDALA   75 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCCCeEEEEccCCceEEEEEeCCC------CceeEEEEEECCHHHHHHHH
Confidence            688999999999999999999999998766 333333433  356677765432      22346889886   588889


Q ss_pred             HHHHHCCCeEeccc-e--eeC-CeEEEEEECCCCCEEEEEe
Q 040429          130 TKLMALGAELDGSI-K--YEI-HGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       130 ~~l~~~G~~~~~~~-~--~~~-~g~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++|+++...+ .  ... .++++||+|||||.|||+-
T Consensus        76 ~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~  116 (120)
T cd07252          76 ARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFW  116 (120)
T ss_pred             HHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEe
Confidence            99999999987432 2  122 2379999999999999974

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.77  E-value=3e-17  Score=118.06  Aligned_cols=113  Identities=18%  Similarity=0.143  Sum_probs=80.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----c--EEEEEeC--C--eEEEEEeCCCCCc-ccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----R--WAELQSG--P--LKLALMQSPSDHV-VQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~--~~~~~~~--~--~~i~l~~~~~~~~-~~~~~~~~~~~~v~  123 (168)
                      .+++|+.|.|+|+++|++||+++|||++.....    .  +..+..+  +  ..+.+........ .......|++|.++
T Consensus        16 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f~v~   95 (150)
T TIGR00068        16 RRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVD   95 (150)
T ss_pred             ceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEEecC
Confidence            789999999999999999999999999866421    1  2222221  1  2233322211111 11234557999999


Q ss_pred             CHHHHHHHHHHCCCeEeccce-ee-CCeEEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIK-YE-IHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~-~~-~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++|.++|+++..++. .. ...+.+||+|||||+|||+++
T Consensus        96 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (150)
T TIGR00068        96 DVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQR  141 (150)
T ss_pred             CHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEC
Confidence            999999999999998876553 22 223688999999999999986

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.77  E-value=4.4e-18  Score=123.04  Aligned_cols=106  Identities=18%  Similarity=0.129  Sum_probs=76.9

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEec--c----c-EEEEEeC-------CeEEEEEeCCCCCcccCCCeEEEEEE
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L----R-WAELQSG-------PLKLALMQSPSDHVVQNGNSSLLSFT  121 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~----~-~~~~~~~-------~~~i~l~~~~~~~~~~~~~~~~~~~~  121 (168)
                      +|+||.|.|+|+++|++||+++|||++....  +    . .+.+..+       .+.+++...+      .+...|++|.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~------~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQGP------ESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcCC------CCceeEEEEE
Confidence            5899999999999999999999999987541  1    1 2222221       1233332211      2446789999


Q ss_pred             eCCHHHHH---HHHHHCCCeEe-ccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          122 VTDINSAV---TKLMALGAELD-GSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       122 v~dl~~~~---~~l~~~G~~~~-~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |+|++++.   ++|+++|+++. ++.++..+. .++|++|||||.|||+..
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            99999987   89999999976 444444333 678999999999999853

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.2e-17  Score=115.99  Aligned_cols=108  Identities=19%  Similarity=0.202  Sum_probs=80.2

Q ss_pred             cEEEEEeCCHHHHHHHHHhccCCEEEEe--cccEEEEEeC-CeEEEEEeCCCC------Cc--ccCCCeEEEEEEeC---
Q 040429           58 RWILQLHKDVPKAARFYSEGLDFTVNVC--TLRWAELQSG-PLKLALMQSPSD------HV--VQNGNSSLLSFTVT---  123 (168)
Q Consensus        58 ~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~~~~~~~~~~-~~~i~l~~~~~~------~~--~~~~~~~~~~~~v~---  123 (168)
                      .++.|.|+|+++|++||++ |||++...  .+..+.+..+ +..+.+...+..      ..  +..+...+++|.++   
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~~~   80 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEKAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADSRE   80 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCCeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCCHH
Confidence            5789999999999999987 99997643  2344555443 456666543210      10  12334457999997   


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      |+++++++++++|+.+..++...++++.+||+|||||+|||+.
T Consensus        81 ~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          81 EVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            5888999999999999877776666788899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.4e-17  Score=114.07  Aligned_cols=109  Identities=15%  Similarity=0.143  Sum_probs=82.0

Q ss_pred             ccEEEEEeCCHHHHHHHHHhc---cCCEEEEec-ccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHH
Q 040429           57 FRWILQLHKDVPKAARFYSEG---LDFTVNVCT-LRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVTD---INS  127 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~v---LGf~~~~~~-~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~  127 (168)
                      ++|+.|.|+|+++|++||+++   ||++..... +.++.+..+  ++.+.+...........+...|++|.+++   +++
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~~~~v~~   80 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPGAVGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPSREAVDA   80 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCceeEeccCCCCceEEEeccccCCCCCCCCceEEEEECCCHHHHHH
Confidence            579999999999999999998   699988765 567666553  67777766433222222334589999986   788


Q ss_pred             HHHHHHHCCCeEeccceee-C---CeEEEEEECCCCCEEEEE
Q 040429          128 AVTKLMALGAELDGSIKYE-I---HGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~-~---~g~~~~~~DPdGn~iel~  165 (168)
                      ++++++++|+.+...+... .   +.+.+||+|||||.|||+
T Consensus        81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          81 FHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             HHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            8999999999877554432 2   226789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.6e-17  Score=112.30  Aligned_cols=107  Identities=15%  Similarity=0.126  Sum_probs=79.5

Q ss_pred             cEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHHHHH
Q 040429           58 RWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAVTKL  132 (168)
Q Consensus        58 ~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~~~l  132 (168)
                      .|+.|.|+|+++|.+||+++||++.....+.+..+..+  ...+.+...+..  . .+...+++|.+++   ++++++++
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~h~~f~v~~~~dl~~~~~~l   79 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRDDYAKFLLEDPRLNFVLNERPGA--P-GGGLNHLGVQVDSAEEVAEAKARA   79 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccCCeeEEEecCCceEEEEecCCCC--C-CCCeeEEEEEeCCHHHHHHHHHHH
Confidence            48999999999999999999999987765555555443  344444433221  1 1345579999977   78899999


Q ss_pred             HHCCCeEeccceeeC---CeEEEEEECCCCCEEEEEee
Q 040429          133 MALGAELDGSIKYEI---HGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       133 ~~~G~~~~~~~~~~~---~g~~~~~~DPdGn~iel~e~  167 (168)
                      .++|+++..++....   .++.+|++|||||.|||++.
T Consensus        80 ~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          80 EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            999999876554332   24789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.76  E-value=2.3e-17  Score=113.52  Aligned_cols=107  Identities=20%  Similarity=0.157  Sum_probs=80.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC---eEEEEEeCCCCCcccCCCeEEEEEEe---CCHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP---LKLALMQSPSDHVVQNGNSSLLSFTV---TDINSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~v---~dl~~~  128 (168)
                      .+|+|+.|.|+|++++++||+++|||++....++++.+..++   +.+.+...+.      ....+++|.+   ++++++
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~l~~~   75 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDDGIVYLRATGSEHHILRLRRSDR------NRLDVVSFSVASRADVDAL   75 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecCCEEEEECCCCccEEEEeccCCC------CCCceEEEEeCCHHHHHHH
Confidence            478999999999999999999999999887666666655432   2223222111      1234689998   578999


Q ss_pred             HHHHHHCCCeEeccce--e-eCCeEEEEEECCCCCEEEEEee
Q 040429          129 VTKLMALGAELDGSIK--Y-EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~--~-~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++|+++|+++..++.  . .++++.++|.||+||.+||+.+
T Consensus        76 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          76 ARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             HHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            9999999999875542  2 3345889999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.76  E-value=3.5e-18  Score=117.86  Aligned_cols=109  Identities=26%  Similarity=0.319  Sum_probs=77.6

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecc--------cEEEEEeC--CeEEEEEeCCCCCcccC----CCeEEEEEE
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--------RWAELQSG--PLKLALMQSPSDHVVQN----GNSSLLSFT  121 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--------~~~~~~~~--~~~i~l~~~~~~~~~~~----~~~~~~~~~  121 (168)
                      +|+|+.|.|+|++++++||+++|||++.....        ....+..+  .+.+.....+.......    ....++++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            58999999999999999999999999998754        22333333  45555555444322221    122345554


Q ss_pred             e---CCHHHHHHHHHHCCCeEeccceeeCCe--EEEEEECCCCCEEEE
Q 040429          122 V---TDINSAVTKLMALGAELDGSIKYEIHG--KVAAMRCIDGHMLGL  164 (168)
Q Consensus       122 v---~dl~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdGn~iel  164 (168)
                      +   +|+++++++|++.|+++..++.....+  ..+|++|||||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            4   678888999999999988777644444  556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.76  E-value=6.9e-17  Score=120.19  Aligned_cols=113  Identities=15%  Similarity=0.135  Sum_probs=84.2

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec---c-cE-EEE-Ee-------------------CCeEEEEEeCCCCCc
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT---L-RW-AEL-QS-------------------GPLKLALMQSPSDHV  109 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~-~~-~~~-~~-------------------~~~~i~l~~~~~~~~  109 (168)
                      -++.|+.|.|+|+++|++||+++|||++..+.   + .+ ..+ ..                   +...|.|........
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            78999999999999999999999999987662   1 22 112 11                   234677765432110


Q ss_pred             ----------c-cCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          110 ----------V-QNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       110 ----------~-~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                                . ...+..|++|.|+|+++++++|+++|+.+...+..+.+.+.+|++|||||.|||++.
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~  174 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDL  174 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEEC
Confidence                      0 112456899999999999999999999987655544345678889999999999985

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.75  E-value=3.6e-17  Score=119.82  Aligned_cols=113  Identities=16%  Similarity=0.223  Sum_probs=81.3

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      |...+|+|+.|.|+|+++|++||+++|||++....  +      .|.......+.+.+...+..   ..+...|++|.++
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~---~~~~~~hiaf~v~   78 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG---ARGRLHHLAYALD   78 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC---CCCCceEEEEECC
Confidence            55678999999999999999999999999987542  1      12222223456665443221   2344568999997


Q ss_pred             CHH---HHHHHHHHCCCeEeccc-eeeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 DIN---SAVTKLMALGAELDGSI-KYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~---~~~~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |.+   +++++|+++|+++...+ .++... .++|++|||||+|||++.
T Consensus        79 ~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            654   77889999999976433 344434 579999999999999875

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.75  E-value=5.2e-17  Score=112.06  Aligned_cols=109  Identities=17%  Similarity=0.246  Sum_probs=81.2

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEeccc-------EEEEEe----CCeEEEEEeCCCCCc---ccCCCeEEEEEE
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR-------WAELQS----GPLKLALMQSPSDHV---VQNGNSSLLSFT  121 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~-------~~~~~~----~~~~i~l~~~~~~~~---~~~~~~~~~~~~  121 (168)
                      +++|+.|.|+|+++|++||+++|||++......       +..+..    +++.+.|...+....   ...+...|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998765321       222322    456777776543321   123345689999


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          122 VT---DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       122 v~---dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                      +.   ++++++++++++|+++..++.. .+++.+||+|||||+|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH-FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee-cceEEEEEECCCCCEEEeC
Confidence            97   5799999999999987654433 4558999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.75  E-value=7.3e-17  Score=113.51  Aligned_cols=107  Identities=8%  Similarity=0.097  Sum_probs=76.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhcc---CCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe---CCHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGL---DFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV---TDINSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vL---Gf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v---~dl~~~  128 (168)
                      .+++|+.|.|+|+++|++||+++|   |++....    ..+..+...+.|...... ........|++|.|   ++++++
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~----~~~~~g~~~l~l~~~~~~-~~~~~g~~h~af~v~~~~dvd~~   80 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE----VAYSTGESEIYFKEVDEE-IVRTLGPRHICYQAINRKVVDEV   80 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee----EeeeCCCeeEEEecCCcc-ccCCCCceeEEEecCChHHHHHH
Confidence            579999999999999999999966   6665421    223334445555432221 11122346899987   889999


Q ss_pred             HHHHHHCCCeEecccee-e--CCe-EEEEEECCCCCEEEEEe
Q 040429          129 VTKLMALGAELDGSIKY-E--IHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~-~--~~g-~~~~~~DPdGn~iel~e  166 (168)
                      +++|+++|+++..++.. .  .+| +.+||+|||||.||+..
T Consensus        81 ~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~  122 (128)
T PRK06724         81 AEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAY  122 (128)
T ss_pred             HHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEe
Confidence            99999999998655432 2  245 78999999999999875

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.75  E-value=3.3e-17  Score=119.43  Aligned_cols=107  Identities=23%  Similarity=0.273  Sum_probs=77.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc---c--EEEEEe---CCeEEEEEeCCCCCcccCCCeEEEEEEeCC--
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL---R--WAELQS---GPLKLALMQSPSDHVVQNGNSSLLSFTVTD--  124 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---~--~~~~~~---~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d--  124 (168)
                      ++|+|+.|.|+|+++|++||+++|||++.....   .  +..+..   ..+.+.+...+.      ....|++|.++|  
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~~~------~~~~Hiaf~v~~~~   75 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGGNG------PRLHHVAFWVPEPH   75 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecCCC------CceeEEEEEcCCHH
Confidence            689999999999999999999999999875421   1  223321   355666554321      234579999976  


Q ss_pred             -HHHHHHHHHHCCCeE--e-ccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          125 -INSAVTKLMALGAEL--D-GSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 -l~~~~~~l~~~G~~~--~-~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                       +++.+++|+++|+..  . ++..++.++ +++||+|||||.|||++.
T Consensus        76 ~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          76 NIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             HHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence             777788999999863  2 333444444 789999999999999853

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.75  E-value=5.2e-17  Score=112.47  Aligned_cols=110  Identities=24%  Similarity=0.237  Sum_probs=84.6

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEeccc-------EEEEEeCCeEEEEEeCCCCCc-------ccCCCeEEEEEEe
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTLR-------WAELQSGPLKLALMQSPSDHV-------VQNGNSSLLSFTV  122 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~-------~~~~~~~~~~i~l~~~~~~~~-------~~~~~~~~~~~~v  122 (168)
                      ++|+.|.|+|++++++||+++|||+.......       ++.+..++..+.+.+......       .......|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            57999999999999999999999999775321       455566788888886433211       1123345799999


Q ss_pred             CCHHHHHHHHHHCCCeEeccce-eeCCeEEEEEECCC---CCEEEEEe
Q 040429          123 TDINSAVTKLMALGAELDGSIK-YEIHGKVAAMRCID---GHMLGLYE  166 (168)
Q Consensus       123 ~dl~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~DPd---Gn~iel~e  166 (168)
                      +|+++++++++++|+++..++. ...+|+.+++.||+   ||+|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            9999999999999999887765 66667555555555   99999986

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.74  E-value=1.4e-16  Score=113.81  Aligned_cols=103  Identities=15%  Similarity=0.078  Sum_probs=76.7

Q ss_pred             cEEEEEeCCHHHHHHHHHhccCCEEEEecc-cEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeCCH---HHHH
Q 040429           58 RWILQLHKDVPKAARFYSEGLDFTVNVCTL-RWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVTDI---NSAV  129 (168)
Q Consensus        58 ~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl---~~~~  129 (168)
                      .||.|.|+|+++|++||+++|||++..... ..+.+..    .++.+.+...      ..+...|++|.|+|+   ++++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~~~~~l~~~~~~~~h~~~~~~~------~~~gl~Hiaf~v~~~~~v~~~~   74 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIEDRIVFMRCHPNPFHHTFAVGPA------SSSHFHHVNFMVTDIDDIGKAL   74 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCCEEEEEEcCCCCCcceeeeccC------CCCceEEEEEECCCHHHHHHHH
Confidence            489999999999999999999999887643 3333332    1344443221      234567899999765   4668


Q ss_pred             HHHHHCCCeEe-ccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          130 TKLMALGAELD-GSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       130 ~~l~~~G~~~~-~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++|+++. ++.+++.++ +++||+|||||.|||.-
T Consensus        75 ~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          75 YRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence            89999999876 455556555 88999999999999974

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=1.2e-16  Score=115.61  Aligned_cols=108  Identities=19%  Similarity=0.187  Sum_probs=80.2

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec--------c-cEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--------L-RWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--------~-~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      .+|+|+.|.|+|++++++||+++|||++....        . ..+.+..  .++.+.+...+.     .+...|++|.|+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-----~~g~~Hiaf~V~   82 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPG-----PKRIHHLMLEVT   82 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCC-----CceeEEEEEEcC
Confidence            68999999999999999999999999986531        1 2333333  345566654332     234568999997


Q ss_pred             CHH---HHHHHHHHCCCeEeccc-eeeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 DIN---SAVTKLMALGAELDGSI-KYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~---~~~~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |++   +++++|+++|+++..++ +++.++ +.+|++|||||.|||+..
T Consensus        83 d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          83 SLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             CHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            765   57999999999987544 344434 889999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.74  E-value=8.1e-17  Score=127.45  Aligned_cols=147  Identities=23%  Similarity=0.279  Sum_probs=97.5

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL   87 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~   87 (168)
                      |..++.+.+   .+|+|..+++......+....  .. ....+.+...+++|+.|.|+|+++|++||+++|||++.....
T Consensus        94 ~~~~~~~~~---~DPdG~~iEl~~~~~~~~~~~--~~-~~~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~  167 (294)
T TIGR02295        94 GGQPEALRV---EDPFGYPIEFYFEMEKVERLL--RR-YHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTE  167 (294)
T ss_pred             CCCceEEEE---ECCCCCEEEEEEchhhccccc--cc-ccccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEec
Confidence            344444433   668899999887665432100  00 001123344789999999999999999999999999876521


Q ss_pred             ----c-EEEEE---eCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHH---HHHHHHHHCCCe--Ee-ccceeeCCe-EEE
Q 040429           88 ----R-WAELQ---SGPLKLALMQSPSDHVVQNGNSSLLSFTVTDIN---SAVTKLMALGAE--LD-GSIKYEIHG-KVA  152 (168)
Q Consensus        88 ----~-~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~---~~~~~l~~~G~~--~~-~~~~~~~~g-~~~  152 (168)
                          . +..+.   ..++.+++...+      .+...|++|.|+|.+   +.+++|+++|++  +. ++.+++.++ +++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~  241 (294)
T TIGR02295       168 DDEGNLAAAWLHRKGGVHDIALTNGN------GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFL  241 (294)
T ss_pred             cCCCcEEEEEEecCCCcCceEeecCC------CCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEE
Confidence                1 23332   234566654321      134568999999855   457889999987  43 444455444 789


Q ss_pred             EEECCCCCEEEEEe
Q 040429          153 AMRCIDGHMLGLYE  166 (168)
Q Consensus       153 ~~~DPdGn~iel~e  166 (168)
                      |++||+||+|||+.
T Consensus       242 y~~DP~G~~iEl~~  255 (294)
T TIGR02295       242 YLRDPDGHRIELYT  255 (294)
T ss_pred             EEECCCCCEEEEEe
Confidence            99999999999975

The enzyme from Bacillus brevis contains manganese.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.74  E-value=1.3e-16  Score=110.93  Aligned_cols=113  Identities=19%  Similarity=0.320  Sum_probs=88.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec----ccEEEEEeCC-eEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----LRWAELQSGP-LKLALMQSPSDHVVQNGNSSLLSFTVTDINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~~~~~~~~~~-~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~  129 (168)
                      ..+.|..|+++|++++++||+++||+++.+..    ..+..+..++ .....+.......+. +....+.|.|+|+++..
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~~~~p~-~~~~~iy~~v~did~~l   86 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPG-GGGWVIYFAVDDIDATL   86 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCCccccceeccCCcCCCC-CCCEEEEEecCChHHHH
Confidence            68999999999999999999999999999983    3566665543 222232222222222 44456889999999999


Q ss_pred             HHHHHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEeeC
Q 040429          130 TKLMALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +++...|.++..++..-+ .|+.+.+.||+||+|.|+++.
T Consensus        87 ~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          87 ERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             HHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            999999999998887666 779999999999999999864

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.73  E-value=1.2e-16  Score=109.24  Aligned_cols=106  Identities=16%  Similarity=0.087  Sum_probs=74.1

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLM  133 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~  133 (168)
                      +|+|+.|.|+|+++|.+||+ .|||++....+.......  ++..+.+...+...   . ....+.+.++|+++++++|.
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~d~~~~~~~l~   76 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGDGLELRTAGNDHRWARLLEGARKR---L-AYLSFGIFEDDFAAFARHLE   76 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecCceEEEecCCCceEEEeecCCCCc---e-eeEEEEeEhhhHHHHHHHHH
Confidence            68999999999999999998 599999766443322222  22334444332111   1 11234556799999999999


Q ss_pred             HCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          134 ALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       134 ~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++...+ ..+.++.+||.|||||.|||..+
T Consensus        77 ~~Gi~~~~~~-~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          77 AAGVALAAAP-PGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             HcCCceecCC-CcCCCCEEEEECCCCCEEEEecC
Confidence            9999976544 23334679999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.73  E-value=1.5e-16  Score=111.77  Aligned_cols=105  Identities=24%  Similarity=0.246  Sum_probs=78.4

Q ss_pred             cEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHH---H
Q 040429           58 RWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDIN---S  127 (168)
Q Consensus        58 ~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~---~  127 (168)
                      +|+.|.|+|+++|++||+++||+++.....     ....+..  .++.+.+.....     .+...|++|.++|++   +
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~hl~~~v~d~~~~~~   75 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPGPE-----RPGLHHVAFEVESLDDILR   75 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcCCC-----CCCeeEEEEEcCCHHHHHH
Confidence            589999999999999999999999876533     2222333  344566655321     334567999998875   6


Q ss_pred             HHHHHHHCCCeEeccce-eeCC-eEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIK-YEIH-GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~-~~~~-g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++|+++...+. .+.+ +++++|.|||||.|||.++
T Consensus        76 ~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~  117 (131)
T cd08343          76 AADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAE  117 (131)
T ss_pred             HHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcC
Confidence            78999999999875443 3333 3788999999999999875

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.73  E-value=1.2e-16  Score=106.71  Aligned_cols=106  Identities=29%  Similarity=0.384  Sum_probs=86.5

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecc----cEEEEEeCCeEEEEEeCCCCCc-ccCCCeEEEEEEeCCHHHHHHHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTL----RWAELQSGPLKLALMQSPSDHV-VQNGNSSLLSFTVTDINSAVTKLM  133 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~v~dl~~~~~~l~  133 (168)
                      |+.|.|+|++++++||+++|||+......    .+..+..++..+.+...+.... ...+...+++|.++|+++++++|.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~   80 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDAAYERLK   80 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCcccCCCeeEEEEECCCHHHHHHHHH
Confidence            78999999999999999999999888753    5666666788899988665432 123445689999999999999999


Q ss_pred             HCCCeEeccce-eeCCeEEEEEECCCCCEEEE
Q 040429          134 ALGAELDGSIK-YEIHGKVAAMRCIDGHMLGL  164 (168)
Q Consensus       134 ~~G~~~~~~~~-~~~~g~~~~~~DPdGn~iel  164 (168)
                      ++|+.+..++. ..++++.+++.||+||.|||
T Consensus        81 ~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          81 AAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            99998876665 44455999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PRK10291 glyoxalase I; Provisional

Probab=99.72  E-value=3.5e-16  Score=109.48  Aligned_cols=106  Identities=15%  Similarity=0.117  Sum_probs=72.8

Q ss_pred             EEeCCHHHHHHHHHhccCCEEEEec--cc----EEEEEeC----CeEEEEEeCCCC-CcccCCCeEEEEEEeCCHHHHHH
Q 040429           62 QLHKDVPKAARFYSEGLDFTVNVCT--LR----WAELQSG----PLKLALMQSPSD-HVVQNGNSSLLSFTVTDINSAVT  130 (168)
Q Consensus        62 l~v~D~~~a~~FY~~vLGf~~~~~~--~~----~~~~~~~----~~~i~l~~~~~~-~~~~~~~~~~~~~~v~dl~~~~~  130 (168)
                      |.|+|+++|++||+++|||++....  +.    .+.+..+    ...+.+...... .........|++|.|+|+++.++
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~~   81 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACE   81 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHHH
Confidence            7899999999999999999987643  21    2222222    122333322111 11112245689999999999999


Q ss_pred             HHHHCCCeEeccce-eeCCe-EEEEEECCCCCEEEEEee
Q 040429          131 KLMALGAELDGSIK-YEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~~~~~~~~-~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++|+++..++. ..+++ +.+||.|||||.|||++.
T Consensus        82 ~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         82 KIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            99999999875443 22333 568899999999999985

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.9e-16  Score=107.80  Aligned_cols=107  Identities=20%  Similarity=0.173  Sum_probs=80.1

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEe-cccEEEEEeCCeEEEEEeCCCC-------CcccCCCeEEEEEEe---CCHHHH
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVC-TLRWAELQSGPLKLALMQSPSD-------HVVQNGNSSLLSFTV---TDINSA  128 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~-~~~~~~~~~~~~~i~l~~~~~~-------~~~~~~~~~~~~~~v---~dl~~~  128 (168)
                      |.|.|+|+++|.+||+++|||++... .+.+..+..++..+.+...+..       .........++++.+   +|++++
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   81 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSNDGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEVDAV   81 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCCCceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHHHHH
Confidence            68999999999999999999999877 4567667667777777653211       011112223455544   689999


Q ss_pred             HHHHHHCCCeEeccceeeCC-eEEEEEECCCCCEEEEEe
Q 040429          129 VTKLMALGAELDGSIKYEIH-GKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~-g~~~~~~DPdGn~iel~e  166 (168)
                      ++++++.|+.+..++...++ ++.+|++||+||+|||..
T Consensus        82 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          82 LARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            99999999998877654444 699999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.71  E-value=2.5e-16  Score=124.65  Aligned_cols=118  Identities=15%  Similarity=0.124  Sum_probs=83.8

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cE--EEEEeC----CeEEEEEeCCCCC-cccCCCeEEE
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RW--AELQSG----PLKLALMQSPSDH-VVQNGNSSLL  118 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~--~~~~~~----~~~i~l~~~~~~~-~~~~~~~~~~  118 (168)
                      +.|...+++|+.|.|+|+++|++||+++|||++.....    .+  ..+..+    +..+.+....... ........|+
T Consensus        18 ~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hi   97 (286)
T PLN02300         18 PKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHF   97 (286)
T ss_pred             CccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEE
Confidence            33455899999999999999999999999999876421    12  223222    2334443322111 1122345579


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccceeeC-Ce-EEEEEECCCCCEEEEEee
Q 040429          119 SFTVTDINSAVTKLMALGAELDGSIKYEI-HG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       119 ~~~v~dl~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|.|+|+++++++|+++|+.+...+...+ ++ +++||+|||||.|||+|.
T Consensus        98 a~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  148 (286)
T PLN02300         98 GIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQR  148 (286)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeC
Confidence            99999999999999999999875554333 33 678999999999999985

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.3e-15  Score=105.60  Aligned_cols=104  Identities=17%  Similarity=0.163  Sum_probs=73.0

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEec---------------ccE--EEEEe----CCeEEEEEeCCCCCcccCCC
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCT---------------LRW--AELQS----GPLKLALMQSPSDHVVQNGN  114 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---------------~~~--~~~~~----~~~~i~l~~~~~~~~~~~~~  114 (168)
                      ++.|+.|.|+|+++|++||+++|||++....               ..|  ..+..    .+..+.|....+......|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            6789999999999999999999999986642               122  11221    34456565444322112222


Q ss_pred             eEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          115 SSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       115 ~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                       .+++|.|++. ++.++|+++|+.+...+.    + ++++.||||+.|||+.
T Consensus        82 -~~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~-~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 -DFLGITIHSK-QAVSNAKKHNWPVTEVED----G-VYEVKAPGGYKFYLID  126 (127)
T ss_pred             -CEEEEEEECH-HHHHHHHHCCCceecCCC----C-EEEEECCCCCEEEEec
Confidence             2578888887 666999999998775432    2 7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.66  E-value=2.2e-15  Score=119.81  Aligned_cols=107  Identities=16%  Similarity=0.198  Sum_probs=81.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~  127 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+..+.+..    +++.+.+...+      .....|++|.++   |+++
T Consensus         3 ~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~g~~hiaf~v~~~~dl~~   76 (303)
T TIGR03211         3 MRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQRVYLKAWDEWDHYSVILTEAD------TAGLDHMAFKVESEADLER   76 (303)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCceEEEEeccccccceEeeccCC------CCceeEEEEEeCCHHHHHH
Confidence            5799999999999999999999999999876554444432    34555554322      123457999997   7889


Q ss_pred             HHHHHHHCCCeEeccce--eeCCeEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIK--YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~--~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++|+.+...+.  ....++.+||+|||||.|||++.
T Consensus        77 ~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        77 LVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             HHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            99999999998764333  23345889999999999999874

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.65  E-value=3.6e-15  Score=118.01  Aligned_cols=106  Identities=19%  Similarity=0.200  Sum_probs=81.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~  127 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+.++.+..    ..+.+.+...+.      ....+++|.++   |+++
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~hiaf~v~~~~dl~~   76 (294)
T TIGR02295         3 LRTGHVELRVTDLDKSREFYVDLLGFRETESDKEYIYLRGIEEFQHHSLVLTKAPS------AALSYIGFRVSKEEDLDK   76 (294)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCCEEEEecCCeEEEeccCcCCceEEEeeeCCC------cCccEEEEEeCCHHHHHH
Confidence            5899999999999999999999999999877666555542    234566554322      22456899986   7899


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++|+.+...+. ...++.+||+|||||.|||++.
T Consensus        77 ~~~~l~~~Gv~v~~~~~-~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        77 AADFFQKLGHPVRLVRD-GGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             HHHHHHhcCCcEEeecC-CCCceEEEEECCCCCEEEEEEc
Confidence            99999999998764332 2334899999999999999874

The enzyme from Bacillus brevis contains manganese.

>PLN02300 lactoylglutathione lyase

Probab=99.65  E-value=2.2e-14  Score=113.51  Aligned_cols=134  Identities=12%  Similarity=0.129  Sum_probs=94.5

Q ss_pred             eEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--cEEE
Q 040429           16 IRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--RWAE   91 (168)
Q Consensus        16 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--~~~~   91 (168)
                      +-++.||+|..+++..+.            ..+      .++.|+.|.|+|++++.+||+++|||++....  +  .|..
T Consensus       132 ~~~~~DPdG~~iEl~~~~------------~~~------~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~  193 (286)
T PLN02300        132 IAFVKDPDGYKFELIQRG------------PTP------EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTI  193 (286)
T ss_pred             EEEEECCCCCEEEEEeCC------------CCC------CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEE
Confidence            445689999999986421            112      57899999999999999999999999997542  2  3433


Q ss_pred             EE--eCC----eEEEEEeCCCC-CcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCC--eEEEEEECCCCCEE
Q 040429           92 LQ--SGP----LKLALMQSPSD-HVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIH--GKVAAMRCIDGHML  162 (168)
Q Consensus        92 ~~--~~~----~~i~l~~~~~~-~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdGn~i  162 (168)
                      ..  .++    ..+.+...... .........+++|.|+|+++.++++.++|+.+..++...++  ++.++|+|||||.+
T Consensus       194 ~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i  273 (286)
T PLN02300        194 AMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKT  273 (286)
T ss_pred             EEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEE
Confidence            21  111    12332221111 11112334579999999999999999999998877654433  37899999999999


Q ss_pred             EEEee
Q 040429          163 GLYEP  167 (168)
Q Consensus       163 el~e~  167 (168)
                      +|.+.
T Consensus       274 ~~~~~  278 (286)
T PLN02300        274 VFVDN  278 (286)
T ss_pred             EEEcc
Confidence            99875

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.65  E-value=3.4e-15  Score=117.94  Aligned_cols=106  Identities=17%  Similarity=0.147  Sum_probs=79.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEeccc---EEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR---WAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~---~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~  128 (168)
                      .++.|+.|.|+|+++|++||+++|||++....+.   |..+...++.+.+...+.      ....+++|.|++   ++++
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~f~V~~~~~l~~~   75 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGENDALYLRLDSRAHRIAVHPGES------DDLAYAGWEVADEAGLDQV   75 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCCCceEEEEcCCCceEEEEEECCc------CCeeeEeeeeCCHHHHHHH
Confidence            4789999999999999999999999998764332   222322466777765442      123469999988   8889


Q ss_pred             HHHHHHCCCeEeccce----eeCCeEEEEEECCCCCEEEEEe
Q 040429          129 VTKLMALGAELDGSIK----YEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~----~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      .++|+++|+++...+.    ....+..++|.|||||.+||+.
T Consensus        76 ~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        76 KEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             HHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            9999999998764321    2233478999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.64  E-value=3.3e-15  Score=100.63  Aligned_cols=111  Identities=17%  Similarity=0.153  Sum_probs=89.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCC-------CeE--EEEEEeCCH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG-------NSS--LLSFTVTDI  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-------~~~--~~~~~v~dl  125 (168)
                      ..+-|..++|.|++++.+||.++||++....++.|..+..-+|++.....+.......|       ..+  -+.+.++|+
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~edW   82 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPVEDW   82 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEHHHH
Confidence            46789999999999999999999999999999999999998999998877654211111       111  267788999


Q ss_pred             HHHHHHHHHCCCeEeccce---eeCCe--EEEEEECCCCCEEEEE
Q 040429          126 NSAVTKLMALGAELDGSIK---YEIHG--KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~---~~~~g--~~~~~~DPdGn~iel~  165 (168)
                      -++.++|.++|+....+|.   .+.-|  +.+++.||.||.+|+-
T Consensus        83 ~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK  127 (138)
T COG3565          83 FALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFK  127 (138)
T ss_pred             HHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeee
Confidence            9999999999999877765   22233  7889999999999984

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.50  E-value=1.4e-12  Score=91.33  Aligned_cols=104  Identities=15%  Similarity=0.077  Sum_probs=77.7

Q ss_pred             EEEe-CCHHHHHHHHHhccCCEEEEecc----------------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           61 LQLH-KDVPKAARFYSEGLDFTVNVCTL----------------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        61 ~l~v-~D~~~a~~FY~~vLGf~~~~~~~----------------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      .|.+ .|.++|++||+++||+++.....                ..+.+..++..|.+...........+....+++.++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~~~~~~~~l~i~~~   83 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPFTFGNGISLSVECD   83 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCCCCCCCEEEEEECC
Confidence            4666 99999999999999999887531                366777888888887654332222344556888887


Q ss_pred             C---HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          124 D---INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       124 d---l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                      |   +++++++|.+.| .+..++...++| +..+++||+||.|+|.
T Consensus        84 ~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          84 SEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             CHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            6   777888887766 666666644555 8999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.45  E-value=5.5e-13  Score=91.18  Aligned_cols=109  Identities=17%  Similarity=0.186  Sum_probs=76.2

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEe-CCeEEEEEeCCCC--------CcccCCCeEEEEEEe--
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQS-GPLKLALMQSPSD--------HVVQNGNSSLLSFTV--  122 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~-~~~~i~l~~~~~~--------~~~~~~~~~~~~~~v--  122 (168)
                      ++-.|+|+|+|+++|++||+. |||+.....  +..+.+-. +..-+.|.....-        .......-..+++.+  
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s   81 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGS   81 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCc
Confidence            456899999999999999998 999998762  33333333 4445555443211        112233345677777  


Q ss_pred             -CCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          123 -TDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       123 -~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                       +++|++.+++++.|.....++.....-+...|.|||||.||+.
T Consensus        82 ~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l  125 (133)
T COG3607          82 REEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFL  125 (133)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEE
Confidence             5699999999999999866654333336678999999999985

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.45  E-value=2.1e-12  Score=99.31  Aligned_cols=112  Identities=18%  Similarity=0.170  Sum_probs=86.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCe-EEEEEeCCCCCc--ccCCCeEEEEEEeCC---HHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPL-KLALMQSPSDHV--VQNGNSSLLSFTVTD---INSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~-~i~l~~~~~~~~--~~~~~~~~~~~~v~d---l~~~  128 (168)
                      ..++.+.|.|+|++++..||+++||+++.+++..-..+..++. -+.|.+.+....  +...+.-|++|-+++   +..+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~~v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~r~~L~~~   88 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDGSVTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAFLLPTREDLARV   88 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCceEEEeeCCEEEEEEEeCCCCCCCCccccceeeeeeecCCHHHHHHH
Confidence            6789999999999999999999999999999887777766554 666666555432  234455678998865   6666


Q ss_pred             HHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          129 VTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ..+|.+.|+.+.|...+.- ...+||.||+||-||++-.
T Consensus        89 l~hl~~~~~~l~Ga~DH~v-SEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          89 LNHLAEEGIPLVGASDHLV-SEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             HHHHHhcCCcccccCcchh-heeeeecCCCCCeEEEEec
Confidence            7788999998876543322 2679999999999999965

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.29  E-value=2e-11  Score=97.54  Aligned_cols=103  Identities=20%  Similarity=0.206  Sum_probs=72.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAVTK  131 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~~~  131 (168)
                      .+.-||+|+|+|+++|++||+++||++.  .+++.+.+. ++.-+++.....  .........+++.++   ++|++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~--Fsde~a~cm-~dtI~vMllt~~--D~~~~~evLl~Ls~~Sre~VD~lv~~  320 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC--WDGDKLFLL-GKTSLYLQQTKA--EKKNRGTTTLSLELECEHDFVRFLRR  320 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC--CCCCccccc-cCcEEEEEecCC--CCCCcceEEEEeccCCHHHHHHHHHH
Confidence            4677999999999999999999888875  333343444 554444444333  222333456888884   58889999


Q ss_pred             HHHCCCeEeccce-eeCCeEEEEEECCCCCEEEEE
Q 040429          132 LMALGAELDGSIK-YEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       132 l~~~G~~~~~~~~-~~~~g~~~~~~DPdGn~iel~  165 (168)
                      +.++|.....++. ++.   .-.|.|||||.||++
T Consensus       321 A~aaGG~~~~~~~D~Gf---~rsf~D~DGH~WEi~  352 (357)
T PRK01037        321 WEMLGGELGEQADGHFP---LRLVFDLDGHIWVVS  352 (357)
T ss_pred             HHHcCCCCCCCcccccC---cceeECCCCCEEEEE
Confidence            9999997644443 444   456889999999996

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.27  E-value=1.4e-11  Score=84.18  Aligned_cols=110  Identities=18%  Similarity=0.147  Sum_probs=69.6

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEeccc-------EEEEEe-CC---eEEEEEe-------C---CCCCcccC--
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLR-------WAELQS-GP---LKLALMQ-------S---PSDHVVQN--  112 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~-------~~~~~~-~~---~~i~l~~-------~---~~~~~~~~--  112 (168)
                      +++|+.|.|+|+++|++||+++|||++......       ...+.. ..   .......       .   ........  
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            689999999999999999999999999887431       111111 10   0111100       0   00000011  


Q ss_pred             -CCeEEEEEEeCC---HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          113 -GNSSLLSFTVTD---INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       113 -~~~~~~~~~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                       ....++.+.+.+   +...+......|..+..... ..++..+||+|||||.+|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcceEEEEECCCCcEEEeeC
Confidence             123468888887   66666677777888654332 333458999999999999975

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.26  E-value=1.4e-10  Score=78.93  Aligned_cols=93  Identities=24%  Similarity=0.275  Sum_probs=68.9

Q ss_pred             cEEEEEeCCHHHHHHHHHhccCCEEEEec---c---cEEEEEeCC--eEEEEEeCCCCCc---ccCCCeEEEEEEeCCHH
Q 040429           58 RWILQLHKDVPKAARFYSEGLDFTVNVCT---L---RWAELQSGP--LKLALMQSPSDHV---VQNGNSSLLSFTVTDIN  126 (168)
Q Consensus        58 ~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~---~~~~~~~~~--~~i~l~~~~~~~~---~~~~~~~~~~~~v~dl~  126 (168)
                      +||.|.|+|+++|++||+++||+......   .   ..+.+..++  ..|.|++...+..   ...+..+|++|.|+|++
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~d   80 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDLD   80 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCHH
Confidence            59999999999999999999999876542   1   244455554  6888887544321   24556789999999999


Q ss_pred             HHHHHHHHCCCeEeccc-eeeCCeE
Q 040429          127 SAVTKLMALGAELDGSI-KYEIHGK  150 (168)
Q Consensus       127 ~~~~~l~~~G~~~~~~~-~~~~~g~  150 (168)
                      +..++|+++|+.+...+ ..+..|+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~g~~g~  105 (109)
T PF13669_consen   81 AAIARLEAQGFRVLDEGPRPGRPGR  105 (109)
T ss_dssp             HHHHHHHHTTECEEECEEEETGTCS
T ss_pred             HHHHHHHHCCCEEcccCcccCCCCc
Confidence            99999999999987554 3444453

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.24  E-value=6.3e-10  Score=78.60  Aligned_cols=107  Identities=21%  Similarity=0.204  Sum_probs=82.3

Q ss_pred             EEEeC-CHHHHHHHHHhccCCEEEEec---c-------------cEEEEEeCCeEEEEEeCCCCCcccCC--CeEEEEEE
Q 040429           61 LQLHK-DVPKAARFYSEGLDFTVNVCT---L-------------RWAELQSGPLKLALMQSPSDHVVQNG--NSSLLSFT  121 (168)
Q Consensus        61 ~l~v~-D~~~a~~FY~~vLGf~~~~~~---~-------------~~~~~~~~~~~i~l~~~~~~~~~~~~--~~~~~~~~  121 (168)
                      .|... |-++|++||+++||+++....   +             ..+.+..++..|.+...........+  ....+.+.
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~~~~~~s~~l~~~   84 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGATEGGGTSLSLDLY   84 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcccCCCeeEEEEEE
Confidence            57778 999999999999999887752   1             24567778888887654332222222  23356777


Q ss_pred             eCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          122 VTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       122 v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++++++|.+.|+++.-|.+...+| ++..++||.|+.|-|..+
T Consensus        85 ~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~  131 (136)
T COG2764          85 VEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTP  131 (136)
T ss_pred             ehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecC
Confidence            8899999999999999998888866666 999999999999998764

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.24  E-value=1.7e-10  Score=82.11  Aligned_cols=54  Identities=22%  Similarity=0.231  Sum_probs=46.4

Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +.+|+||.|+|++....+++++|+++...+..+..-..+++.||||+.|||.-.
T Consensus       115 GfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  115 GFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             ccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            567899999999999999999999987766655554678899999999999754

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.09  E-value=1.5e-09  Score=82.28  Aligned_cols=138  Identities=10%  Similarity=0.098  Sum_probs=92.9

Q ss_pred             CCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccE
Q 040429           10 APREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRW   89 (168)
Q Consensus        10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~   89 (168)
                      ++.---+-+..+|+|.-.++-.+            ...+      ..+..|.|.|.|+++|++||++.|||++.+..+.+
T Consensus       121 ~~~g~~~~~v~dPdGykF~l~~~------------~p~s------~pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek~  182 (299)
T KOG2943|consen  121 KGSGCGIAFVKDPDGYKFYLIDR------------GPQS------DPVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEKY  182 (299)
T ss_pred             cccceEEEEEECCCCcEEEEecc------------CCCC------CCeEEEEEEehhHHHHHHHHHHHhCcchhhhhhhh
Confidence            33444455667788877765221            1122      56888999999999999999999999999854433


Q ss_pred             EE--EEe--CCeEEEEEeCCCCCcccCCCeEEEEEEe--CCHHHHHHHHHHCCCeEeccce--eeCCe---EEEEEECCC
Q 040429           90 AE--LQS--GPLKLALMQSPSDHVVQNGNSSLLSFTV--TDINSAVTKLMALGAELDGSIK--YEIHG---KVAAMRCID  158 (168)
Q Consensus        90 ~~--~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl~~~~~~l~~~G~~~~~~~~--~~~~g---~~~~~~DPd  158 (168)
                      ..  +..  ++..+.|....+.-.... .+..++|.+  +++..+.+.++..+..+.++..  ..|++   ..+.+.|||
T Consensus       183 t~~~mgYgd~q~~LElt~~~~~id~~k-g~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPD  261 (299)
T KOG2943|consen  183 TRARMGYGDEQCVLELTYNYDVIDRAK-GFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPD  261 (299)
T ss_pred             hhhhhccCCcceEEEEEeccCcccccc-cceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCC
Confidence            32  322  456667766554422222 223455655  7888888888888888777665  33333   577899999


Q ss_pred             CCEEEEEe
Q 040429          159 GHMLGLYE  166 (168)
Q Consensus       159 Gn~iel~e  166 (168)
                      ||.++|+.
T Consensus       262 gheicfVd  269 (299)
T KOG2943|consen  262 GHEICFVD  269 (299)
T ss_pred             CceEEEec
Confidence            99999975

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.03  E-value=3e-09  Score=79.66  Aligned_cols=89  Identities=18%  Similarity=0.179  Sum_probs=65.9

Q ss_pred             ccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc--c------EEEEEe--CCeEEEEEeCCCC-C---------cccC
Q 040429           55 ASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL--R------WAELQS--GPLKLALMQSPSD-H---------VVQN  112 (168)
Q Consensus        55 ~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~--~------~~~~~~--~~~~i~l~~~~~~-~---------~~~~  112 (168)
                      .+++|+.+.|+  |+++|++||+++|||+......  +      ...+..  +...+.|.....+ .         .+..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            47899999999  9999999999999999876531  1      222222  4567777754331 1         1113


Q ss_pred             CCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          113 GNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       113 ~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                      .+..|++|.|+|+++.+++|+++|+++..+|
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            4566899999999999999999999987554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.99  E-value=2.8e-08  Score=80.97  Aligned_cols=105  Identities=19%  Similarity=0.178  Sum_probs=77.5

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe---cc--cEEEEEeCCeEEEEEeCCCCC-------cccCCCeEEEEEEeC
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC---TL--RWAELQSGPLKLALMQSPSDH-------VVQNGNSSLLSFTVT  123 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~---~~--~~~~~~~~~~~i~l~~~~~~~-------~~~~~~~~~~~~~v~  123 (168)
                      +++|+.+.|+|++++.+||++.|||++...   ..  .+..+..++..+.|.....+.       ..+.....+++|.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~   81 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVD   81 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEEC
Confidence            589999999999999999999999998876   22  344566688888887654322       112334567999999


Q ss_pred             CHHHHHHHHHHCCCeEeccce------------eeCCeEEEEEECCCCC
Q 040429          124 DINSAVTKLMALGAELDGSIK------------YEIHGKVAAMRCIDGH  160 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~------------~~~~g~~~~~~DPdGn  160 (168)
                      |+++.++++.++|+.+..++.            .++++...+|.|+++.
T Consensus        82 Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~  130 (353)
T TIGR01263        82 DAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGY  130 (353)
T ss_pred             CHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCC
Confidence            999999999999999865432            1234456667676543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK10148 hypothetical protein; Provisional

Probab=98.87  E-value=2.8e-07  Score=66.28  Aligned_cols=105  Identities=9%  Similarity=0.032  Sum_probs=75.0

Q ss_pred             EEEeC-CHHHHHHHHHhccCCEEEEec------------------------c--cEEEEEeCCeEEEEEeCCCCCcccCC
Q 040429           61 LQLHK-DVPKAARFYSEGLDFTVNVCT------------------------L--RWAELQSGPLKLALMQSPSDHVVQNG  113 (168)
Q Consensus        61 ~l~v~-D~~~a~~FY~~vLGf~~~~~~------------------------~--~~~~~~~~~~~i~l~~~~~~~~~~~~  113 (168)
                      .|... |-++|++||+++||.++....                        .  ..+.+..++..|.+....... ...+
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~-~~~~   84 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG-KAHY   84 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc-CCCC
Confidence            45664 899999999999999875321                        1  155667788777776543221 1222


Q ss_pred             CeEEEEEEeCCHHH---HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          114 NSSLLSFTVTDINS---AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~---~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ...++++.++|.++   ++++| +.|.++..|+....+| ++.-+.||.|+.|.|..+
T Consensus        85 ~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         85 SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            35567888888877   55555 6888888888766666 899999999999999654

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.76  E-value=6.3e-08  Score=78.94  Aligned_cols=93  Identities=16%  Similarity=0.144  Sum_probs=67.1

Q ss_pred             ccccccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc------c---EEEEE-eCCeEEEEEeCCC---CC------c
Q 040429           51 VMAAASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL------R---WAELQ-SGPLKLALMQSPS---DH------V  109 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~------~---~~~~~-~~~~~i~l~~~~~---~~------~  109 (168)
                      .|...+++|+.+.|+  |+++++.||+++|||++....+      .   ++... .+...|.|.....   ..      .
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHH
Confidence            344468999999999  9999999999999999875421      1   11222 2456777776311   11      0


Q ss_pred             cc-CCCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          110 VQ-NGNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       110 ~~-~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                      .+ ..+..|++|.|+|+++.+++|+++|+.+..+|
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            11 23456899999999999999999999987654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.61  E-value=5e-07  Score=69.92  Aligned_cols=85  Identities=18%  Similarity=0.117  Sum_probs=56.5

Q ss_pred             eeecCcceeeecchhccccc----------------cchhhhccccc-cccc-cccccEEEEEeCCHHHHHHHHHhccCC
Q 040429           19 LHSLSGSLVKSSARLSKVHK----------------RDEVRERERER-RVMA-AASFRWILQLHKDVPKAARFYSEGLDF   80 (168)
Q Consensus        19 ~~~~~g~~~~~~~~~~~~~~----------------~~~~~~~~~~~-~~m~-~~~i~hv~l~v~D~~~a~~FY~~vLGf   80 (168)
                      +.||+|-=+|.+++.++-.=                +..+.....+. -++. ...|.||.|.|.|++++.+||+++|||
T Consensus       113 l~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~  192 (265)
T COG2514         113 LEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGL  192 (265)
T ss_pred             ecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCC
Confidence            37899999999999652211                11111111110 1111 267999999999999999999999999


Q ss_pred             EEEEecccEEEEEe--CCeEEEEEe
Q 040429           81 TVNVCTLRWAELQS--GPLKLALMQ  103 (168)
Q Consensus        81 ~~~~~~~~~~~~~~--~~~~i~l~~  103 (168)
                      +.+.+.+....+..  -+|.|+++.
T Consensus       193 ~~~~~~~~A~F~a~G~YHHHia~N~  217 (265)
T COG2514         193 EVTARGPSALFLASGDYHHHLAANT  217 (265)
T ss_pred             eeeecCCcceEEecCCcceeEEEec
Confidence            99998443333444  467777763

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.53  E-value=1.8e-05  Score=54.25  Aligned_cols=106  Identities=18%  Similarity=0.126  Sum_probs=68.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe--CCeEEEEEeCCCCCc---ccCCCeEEEEEEeCCHHHHHHHHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS--GPLKLALMQSPSDHV---VQNGNSSLLSFTVTDINSAVTKLM  133 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~---~~~~~~~~~~~~v~dl~~~~~~l~  133 (168)
                      +-+|.|.|=+..++||++.|||++.......+.+..  +...+.|...|....   ..+.....+.+.+++..++- .|.
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEna~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EIe-~LL   81 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEENALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEIE-ALL   81 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEETTEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHHH-HHH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccccEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHHHH-HHH
Confidence            457899999999999999999999998777777765  567777877776542   22445567899998877764 445


Q ss_pred             HCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          134 ALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       134 ~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++|..+ ...-.+..|+.+-..+|+|+++.+..
T Consensus        82 ar~~~~-~~l~kg~~gyAfe~vSPEgd~~llha  113 (125)
T PF14506_consen   82 ARGAQY-DRLYKGKNGYAFEAVSPEGDRFLLHA  113 (125)
T ss_dssp             HC-S---SEEEE-SSSEEEEEE-TT--EEEEE-
T ss_pred             hccccc-ceeEEcCCceEEEEECCCCCEEEEEE
Confidence            556553 33446777877778899999999864

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.39  E-value=4e-06  Score=63.88  Aligned_cols=105  Identities=18%  Similarity=0.141  Sum_probs=68.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc---------------cE----EEEEe--CCeEEEEEeCCCCCc-ccC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL---------------RW----AELQS--GPLKLALMQSPSDHV-VQN  112 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---------------~~----~~~~~--~~~~i~l~~~~~~~~-~~~  112 (168)
                      .+.-|+++.|.|.++++.||+++|||.+....+               .|    ..+..  .++.+.|.-+-+... .-.
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            578899999999999999999999999887531               12    22222  245555544333211 111


Q ss_pred             CCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          113 GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       113 ~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ....++.+..+|+-...+.+...|.+.       .+--.+++.||||+.++|.+
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~~~-------~g~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGGKG-------SGCGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCCcc-------cceEEEEEECCCCcEEEEec
Confidence            223357777777777777766544421       11145778999999999985

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.29  E-value=5.7e-06  Score=68.29  Aligned_cols=87  Identities=14%  Similarity=0.037  Sum_probs=64.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----------cEEEEEe--CCeEEEEEeCCC---C-C-------cc
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----------RWAELQS--GPLKLALMQSPS---D-H-------VV  110 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----------~~~~~~~--~~~~i~l~~~~~---~-~-------~~  110 (168)
                      .+|+|+.+.|+|++.++.||+++|||+.....+           ....+..  +...|.|+....   . +       ..
T Consensus       179 ~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~~  258 (398)
T PLN02875        179 RRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEHN  258 (398)
T ss_pred             ceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHhc
Confidence            489999999999999999999999998775321           1112222  346677766431   1 1       11


Q ss_pred             cCCCeEEEEEEeCCHHHHHHHHHHC----CCeEec
Q 040429          111 QNGNSSLLSFTVTDINSAVTKLMAL----GAELDG  141 (168)
Q Consensus       111 ~~~~~~~~~~~v~dl~~~~~~l~~~----G~~~~~  141 (168)
                      ...+..|++|.++||.+..++|+++    |+++..
T Consensus       259 ~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        259 EGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             CCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence            1246789999999999999999998    999876

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.14  E-value=5.7e-05  Score=53.68  Aligned_cols=110  Identities=19%  Similarity=0.272  Sum_probs=71.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEe--cccEEEEEeCCeEEEEEeCCCCCc-----ccCCCeEEEEEEeCCHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVC--TLRWAELQSGPLKLALMQSPSDHV-----VQNGNSSLLSFTVTDINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~v~dl~~  127 (168)
                      ..+++|.+.++|.+++..+++. |||+...+  +-....+..|+..+.|+..++...     .|.....-++|.|+|.++
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~~~-lGF~~~a~hrsk~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~Da~~   86 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLFTA-LGFQPVARHRSKDVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVDDAAA   86 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHHCC-CCEEEECCECCCSEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES-HHH
T ss_pred             CCeEEEEEecCCHHHHHHHHHH-hCcceEEecCCcceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeCCHHH
Confidence            5799999999998888888875 99999876  234556777999999987665411     122233458999999999


Q ss_pred             HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          128 AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      .++++.+.|++...++ .+.+. ...-++-+.|-++-|++
T Consensus        87 A~~rA~~~GA~~~~~~-~~~~e~~~paI~g~G~sl~yfVd  125 (139)
T PF14696_consen   87 AYERAVALGAEPVQEP-TGPGELNIPAIRGIGGSLHYFVD  125 (139)
T ss_dssp             HHHHHHHTT--EEEEE-EETT-BEEEEEE-CCC-EEEEEE
T ss_pred             HHHHHHHcCCcCcccC-CCCCcEeeeeEEccCCCEEEEEe
Confidence            9999999999865432 22222 23334444444444443

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.99  E-value=9.6e-05  Score=54.30  Aligned_cols=82  Identities=18%  Similarity=0.187  Sum_probs=47.1

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEEEeCCeEEEEEeCCCCCc-------------ccCCCeEE
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAELQSGPLKLALMQSPSDHV-------------VQNGNSSL  117 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~~~~~~~i~l~~~~~~~~-------------~~~~~~~~  117 (168)
                      |+|+++.|+|+++++++|++.|||.+.....      .-..+..++..|.|........             ....+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999997779999987631      1222333555888876422100             01234457


Q ss_pred             EEEEeCCHHHHHHHHHHCCCe
Q 040429          118 LSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus       118 ~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      +++.++|+++..+++.+.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999986

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.91  E-value=0.0012  Score=45.50  Aligned_cols=93  Identities=20%  Similarity=0.155  Sum_probs=60.6

Q ss_pred             EEeCCHHHHHHHHHhccCCE-EEEe---cc---------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH-
Q 040429           62 QLHKDVPKAARFYSEGLDFT-VNVC---TL---------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS-  127 (168)
Q Consensus        62 l~v~D~~~a~~FY~~vLGf~-~~~~---~~---------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~-  127 (168)
                      .+-.|-++|.+||+++||-. +...   .+         ..+.+..++..|.+......  ...+....+++.++|.++ 
T Consensus         8 ~F~g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~--~~~~~~~sl~i~~~~~ee~   85 (116)
T PF06983_consen    8 WFNGNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPD--FPFGNNISLCIECDDEEEI   85 (116)
T ss_dssp             EESS-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS------TTEEEEEEESSHHHH
T ss_pred             EeCCCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCC--CCCCCcEEEEEEcCCHHHH
Confidence            34579999999999999953 2222   11         25677889999988776522  122334568888877555 


Q ss_pred             --HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          128 --AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       128 --~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                        ++++|.+.|-         +++.+-.+.|..|..|.|+
T Consensus        86 ~~~f~~Ls~gG~---------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   86 DRIFDKLSEGGQ---------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHTTTE---------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHcCCC---------ccceeEEEEeCCCCEEEeC
Confidence              5566766554         5558888999999999885

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.88  E-value=5.1e-05  Score=60.13  Aligned_cols=89  Identities=20%  Similarity=0.308  Sum_probs=64.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec------ccEEEEEe--CCeEEEEEeCCCCCccc-------CC-CeEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT------LRWAELQS--GPLKLALMQSPSDHVVQ-------NG-NSSLL  118 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~------~~~~~~~~--~~~~i~l~~~~~~~~~~-------~~-~~~~~  118 (168)
                      .+++||.+.|.|...+..||+..|||+...+.      ..|+....  |...+.+..+-.+..+.       .| ..--+
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvkdv   95 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVKDV   95 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchhce
Confidence            68999999999999999999999999988753      13444322  44444444433221111       11 12249


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          119 SFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       119 ~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                      +|+|+|++++.+.+.++|+.+..+|
T Consensus        96 afeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   96 AFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             EEEecchHHHHHHHHHcCCcccCCc
Confidence            9999999999999999999987664

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.88  E-value=0.00097  Score=55.25  Aligned_cols=88  Identities=20%  Similarity=0.106  Sum_probs=62.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc------c--EEEEEeCCeEEEEEeCCCC--C-----------------c
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL------R--WAELQSGPLKLALMQSPSD--H-----------------V  109 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~--~~~~~~~~~~i~l~~~~~~--~-----------------~  109 (168)
                      ++||.++|.|..++..||+..|||+...+..      .  ...+..+...+.+.....+  .                 .
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            5899999999999999999889999877532      1  2234557777777654211  0                 0


Q ss_pred             -------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccce
Q 040429          110 -------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIK  144 (168)
Q Consensus       110 -------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~  144 (168)
                             .|.....-++|.|+|+++.++++.++|+....++.
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~  122 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPT  122 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCc
Confidence                   01122235899999999999999999998765443

>PF15067 FAM124: FAM124 family

Probab=97.83  E-value=0.00027  Score=53.88  Aligned_cols=101  Identities=20%  Similarity=0.139  Sum_probs=68.9

Q ss_pred             cccEEEEEeC--CHHHHHHHHHhccCCEEEEecccEEEEEe---CCeEEEEE--eCCCCCcccCCCeEEEEEEeCCHHHH
Q 040429           56 SFRWILQLHK--DVPKAARFYSEGLDFTVNVCTLRWAELQS---GPLKLALM--QSPSDHVVQNGNSSLLSFTVTDINSA  128 (168)
Q Consensus        56 ~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~~~~~~~~---~~~~i~l~--~~~~~~~~~~~~~~~~~~~v~dl~~~  128 (168)
                      -+-.++|+|+  |.+.+++||+-+|+-+.....++|-.|..   .+.+|-|.  +-+.+-.+.+-....+.|.|.|+.++
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~FC~F~lys~~~~~iQlsLK~lp~~~~p~p~esavLqF~V~~igqL  207 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKEDFCFFTLYSQPGLDIQLSLKQLPPGMSPEPTESAVLQFRVEDIGQL  207 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCCcEEEEEecCCCeEEEEEeccCCCCCCcccccceEEEEEecchhhh
Confidence            5667899999  99999999999999999888888777755   34444333  33333233344455699999999988


Q ss_pred             HHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEE
Q 040429          129 VTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGL  164 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel  164 (168)
                      ..-|-.        +-...+....--.|||||.|=|
T Consensus       208 vpLLPn--------pc~PIS~~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  208 VPLLPN--------PCSPISETRWQTEDYDGNKILL  235 (236)
T ss_pred             cccCCC--------CcccccCCcceeeCCCCCEecc
Confidence            544422        2222233345678999999743

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.58  E-value=0.00032  Score=56.42  Aligned_cols=134  Identities=16%  Similarity=0.166  Sum_probs=85.0

Q ss_pred             CceeeeEEeeecCcceeeecchh--ccccccchhhhc-cccccccccccccEEEEEe--CCHHHHHHHHHhccCCEEEEe
Q 040429           11 PREVRIRVLHSLSGSLVKSSARL--SKVHKRDEVRER-ERERRVMAAASFRWILQLH--KDVPKAARFYSEGLDFTVNVC   85 (168)
Q Consensus        11 ~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~-~~~~~~m~~~~i~hv~l~v--~D~~~a~~FY~~vLGf~~~~~   85 (168)
                      .-++.+-.+.++.|+++..-...  ...+..+-+... ...........|+|++.++  .+++.+..||+++|||+....
T Consensus       119 ~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~  198 (363)
T COG3185         119 AGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQY  198 (363)
T ss_pred             CccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeechhhhhcchhhHHHHHHHHHHHhCccceee
Confidence            34577777888999988876665  222222111111 1111111113789996554  599999999999999998876


Q ss_pred             cc---c----EEEEE---eCCeEEEEEeCCCCCc--------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccce
Q 040429           86 TL---R----WAELQ---SGPLKLALMQSPSDHV--------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIK  144 (168)
Q Consensus        86 ~~---~----~~~~~---~~~~~i~l~~~~~~~~--------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~  144 (168)
                      .+   .    ....+   .+...|-|+...+.+.        ....+..|++|.++||-+..+++++.|+.+...|+
T Consensus       199 fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         199 FDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             EeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            32   1    11111   1556666655444321        12335578999999999999999999999875443

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.48  E-value=0.0025  Score=51.41  Aligned_cols=104  Identities=18%  Similarity=0.227  Sum_probs=76.4

Q ss_pred             ccccEEEEEeCCH-HHHHHHHHhccCCEEEEe--cccEEEEEeCCeEEEEEeCCCCC-----cccCCCeEEEEEEeCCHH
Q 040429           55 ASFRWILQLHKDV-PKAARFYSEGLDFTVNVC--TLRWAELQSGPLKLALMQSPSDH-----VVQNGNSSLLSFTVTDIN  126 (168)
Q Consensus        55 ~~i~hv~l~v~D~-~~a~~FY~~vLGf~~~~~--~~~~~~~~~~~~~i~l~~~~~~~-----~~~~~~~~~~~~~v~dl~  126 (168)
                      ..++++.+.++|. ++..+.+.. |||+....  +.....+..|+..+.++..+...     ..|.....-++|.|+|..
T Consensus        21 ~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrsk~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~~a~a~~V~DA~   99 (363)
T COG3185          21 DGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRSKAVTLYRQGDINLVVNAEPDSFAAEFLDKHGPSACAMAFRVDDAE   99 (363)
T ss_pred             CceeEEEEecCCHHHHHHHHHHH-hCccccccccccceeEEEeCCEEEEEcCCCcchhhHHHHhcCCchheeEEeeCCHH
Confidence            7899999999999 777777776 99998765  33555567788888877655431     122233345899999999


Q ss_pred             HHHHHHHHCCCeEe-cc---------ceeeCCeEEEEEECCCC
Q 040429          127 SAVTKLMALGAELD-GS---------IKYEIHGKVAAMRCIDG  159 (168)
Q Consensus       127 ~~~~~l~~~G~~~~-~~---------~~~~~~g~~~~~~DPdG  159 (168)
                      ..++++.++|.... .+         .-.+.+|..+||.|.+|
T Consensus       100 ~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185         100 QALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             HHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            99999999999432 21         22566889999999984

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=97.00  E-value=0.0019  Score=43.23  Aligned_cols=90  Identities=17%  Similarity=0.128  Sum_probs=43.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcc----cCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVV----QNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~v~---dl~~  127 (168)
                      ..+..+.|+|+| +++.+||+++||-.             ....+.+.++.++...    ..-....+=|.|+   |+.+
T Consensus         4 F~~e~i~LNV~d-~~~~~fy~~~f~~~-------------~~~~l~f~ea~G~DL~~~~~~twDLe~Lkf~V~~~~Dl~~   69 (101)
T PF14507_consen    4 FEFESIELNVPD-AKSQSFYQSIFGGQ-------------LPFFLTFQEAQGPDLTIENNETWDLEMLKFQVPKDFDLAA   69 (101)
T ss_dssp             EEE-EEEEEE-T--T---S--H---HH-------------HTTTEEEEE---CCGSS-TTSBSSEEEEEEEES-S--HHH
T ss_pred             eEEEEEEEeCCC-hhHHHHHHhccccC-------------CCceEEEeeccCCccccCCCcEEeeEEEEEEecCcccHHH
Confidence            567889999999 88999999988621             1244555555444221    1222334667776   6777


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEE
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGL  164 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel  164 (168)
                      +.+++...++=      .....+++-+.||+|..|.+
T Consensus        70 L~~~le~~~~f------idKk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   70 LKSHLEEQEFF------IDKKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             HHHHTTTS-EE--------TT-SEEEEE-TTS-EEEE
T ss_pred             HHHHhcccceE------ecCCceEEEEECCcceEEEe
Confidence            87777663322      23345889999999988776

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.83  E-value=0.043  Score=36.77  Aligned_cols=53  Identities=26%  Similarity=0.310  Sum_probs=40.9

Q ss_pred             EEEEEEeCCHHHHHHHHHH-CCCeEeccceeeCCe-EEEEEECCCC-CEEEEEeeC
Q 040429          116 SLLSFTVTDINSAVTKLMA-LGAELDGSIKYEIHG-KVAAMRCIDG-HMLGLYEPA  168 (168)
Q Consensus       116 ~~~~~~v~dl~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~DPdG-n~iel~e~~  168 (168)
                      .|+++.|.|+++.++.+.. .|............+ +..++..++| ..|||++|.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            3799999999999999987 998866555555555 6667788888 689999973

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.34  E-value=0.67  Score=33.05  Aligned_cols=101  Identities=12%  Similarity=0.099  Sum_probs=63.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEE----ecc----------cEEEEEeCCeEEEEEeC-CCCCcccCCCeEEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNV----CTL----------RWAELQSGPLKLALMQS-PSDHVVQNGNSSLLS  119 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~----~~~----------~~~~~~~~~~~i~l~~~-~~~~~~~~~~~~~~~  119 (168)
                      .++.-+..+-.+.++|..||.++|-=+..-    +..          -.+.|..++..+..+.. +..+... ....++.
T Consensus         4 ~kit~~L~F~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~~f~f-neA~S~~   82 (151)
T COG3865           4 PKITPFLWFDGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNTSFKF-NEAFSFQ   82 (151)
T ss_pred             CcceeEEEECCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCcCCCc-CccEEEE
Confidence            677777788899999999999987544322    111          26667777666665543 2211221 1122344


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          120 FTVT---DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       120 ~~v~---dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                      +.++   .+|.+.++|...|.+..         ....+.|-.|.-|+|.
T Consensus        83 v~~~~q~E~Drlwnal~~~g~e~~---------~cgW~kDKfGVSWQi~  122 (151)
T COG3865          83 VACDDQEEIDRLWNALSDNGGEAE---------ACGWLKDKFGVSWQIV  122 (151)
T ss_pred             EEcCCHHHHHHHHHHHhccCcchh---------cceeEecccCcEEEEc
Confidence            4554   47778888888776322         4456889999888875

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=95.03  E-value=0.025  Score=45.25  Aligned_cols=93  Identities=14%  Similarity=0.148  Sum_probs=62.2

Q ss_pred             ccccccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc------cEEE-----EEeCCeEEEEEeCC---CCCc-----
Q 040429           51 VMAAASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL------RWAE-----LQSGPLKLALMQSP---SDHV-----  109 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~------~~~~-----~~~~~~~i~l~~~~---~~~~-----  109 (168)
                      .+...+++|++.+++  .++.+.+||.++|||.--...+      .+..     +.....+|.+--+.   +.+.     
T Consensus       173 ~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIq  252 (381)
T KOG0638|consen  173 KGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQ  252 (381)
T ss_pred             ccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHH
Confidence            344578999999999  7899999999999997654421      1111     11233444432221   1111     


Q ss_pred             -----ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          110 -----VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       110 -----~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                           +..++..|+++.++||-+..+.++++|.++..+|
T Consensus       253 eyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~P  291 (381)
T KOG0638|consen  253 EYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPP  291 (381)
T ss_pred             HHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCC
Confidence                 1233456899999999999999999999987544

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=88.64  E-value=2  Score=27.32  Aligned_cols=42  Identities=26%  Similarity=0.313  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHHCCCeEecccee-eCCeEEEEEECCCCCEEEEEe
Q 040429          124 DINSAVTKLMALGAELDGSIKY-EIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~DPdGn~iel~e  166 (168)
                      +.+++.+.+...|.. ....+. ..+.+.+...|.||+.+|+.=
T Consensus        30 ~~~~~~~~l~~~G~~-v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQ-VREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCc-eEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            788999999999995 445665 334488899999999999863

This is family M4 in the peptidase classification.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=86.65  E-value=0.48  Score=34.33  Aligned_cols=31  Identities=16%  Similarity=0.135  Sum_probs=22.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEe
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVC   85 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~   85 (168)
                      ..+.|..+.++|+.+|..||++++|+.+...
T Consensus        21 ~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~   51 (170)
T KOG2944|consen   21 YLLQQTMLRVKDPTGSLKFYTRVNGMALLVP   51 (170)
T ss_pred             hhhhhceeecccchhhhhhhhhhccceeech
Confidence            5567777777777777777777777776553

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.25  E-value=10  Score=25.87  Aligned_cols=53  Identities=26%  Similarity=0.376  Sum_probs=35.3

Q ss_pred             eEEEEEEeCCHHHHHHHHHHCCCeEecccee-e----------CCe-EEEEEECCCC-CEEEEEee
Q 040429          115 SSLLSFTVTDINSAVTKLMALGAELDGSIKY-E----------IHG-KVAAMRCIDG-HMLGLYEP  167 (168)
Q Consensus       115 ~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~-~----------~~g-~~~~~~DPdG-n~iel~e~  167 (168)
                      ..|+++.|.|+++..+-....|..+...... +          ..+ ...++..|+| -.+||+++
T Consensus         4 i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~   69 (142)
T cd08353           4 MDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKF   69 (142)
T ss_pred             eeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEe
Confidence            4579999999999999877789876533211 0          112 4455666666 46888763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-15
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	5e-11
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	4e-08
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	9e-08
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	3e-07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	1e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-06
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	1e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	2e-05
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	2e-05
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	7e-05
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-04
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	3e-04
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	4e-04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	4e-04
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-04
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	8e-04

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 1/104 (0%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
            +VP+        LD   +     +A+   G   L L Q+    +    +  ++   V D
Sbjct: 14  SNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGIIIHIEVED 73

Query: 125 INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
           ++    +L  LG ++         G +   ++   G +L  Y  
Sbjct: 74  VDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM 117

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 56.4 bits (136), Expect = 5e-11
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 6/109 (5%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSL-LSFTVT 123
            D+ +A   + + L F +      +A L+     L L++ P+  ++ +G + + +   V+
Sbjct: 16  PDMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIPDGIARVAICIDVS 75

Query: 124 DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCI-----DGHMLGLYEP 167
           DI+S  TKL      L       +       R       DG  L    P
Sbjct: 76  DIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAP 124

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 12/113 (10%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQN---------GNS 115
           +D+ ++  FY + L   +      +   ++G   +   +S  + + +            +
Sbjct: 17  RDINRSKSFYRDRLGLKILEDFGSFVLFETG-FAIHEGRSLEETIWRTSSDAQEAYGRRN 75

Query: 116 SLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
            LL F   D+++A   +     EL   ++ +  G +V      DGH + + E 
Sbjct: 76  MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGES 127

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 47.5 bits (113), Expect = 9e-08
 Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 65  KDVPKAARFYSEGLDFTVNV-----CTLRWAELQSGPLKLALMQSPSDHVVQ---NGNSS 116
            D  +A  +      F + +      T+R A+L +G   + + ++   + V         
Sbjct: 11  TDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCK 70

Query: 117 LLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
            +   V+D++    +  A GA++   ++ +  G +   +R ++GH+      
Sbjct: 71  QVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRH 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 9/108 (8%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLA-----LMQSPSDHVVQNGNSSLLS 119
            D+  A  FY E L+  V        E+    ++LA     L+ + S+  ++   ++  +
Sbjct: 15  ADLNPALEFYEELLETPV----AMRFEIPQTGVELAQISTILLIAGSEEALKPFRNTQAT 70

Query: 120 FTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP 167
           F V  ++   T L   GAE+         G+   +R  DG ++   E 
Sbjct: 71  FLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEH 118

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 6/110 (5%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGP-LKLALMQSPSD--HVVQNGNSSLLSFT 121
            + P + +FY   L       +  ++       +KL L    +        G    L+F 
Sbjct: 34  DNPPASTQFYKALLGVDPVESSPTFSLFVLANGMKLGLWSRHTVEPKASVTGGGGELAFR 93

Query: 122 VTDINS---AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
           V +            A G  +         G        D H L +Y  A
Sbjct: 94  VENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 14/118 (11%)

Query: 65  KDVPKAARFYSEGLDFTVNVCT----LRWAELQSGP--------LKLALMQSPSDHVVQN 112
            D  KA  FY+  L F V         RW  + S          L+ +   + +      
Sbjct: 35  DDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEAL 94

Query: 113 --GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
                   SF V DI +   +L ALG               A +    G+++ L + A
Sbjct: 95  VADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA 152

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 65  KDVPKAARFYSE-GLDFTVNV---CTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSF 120
             +     FY   G  FT +     +     + +G    +L    +        S  L F
Sbjct: 15  SHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVE-FSLYSIQNPQR-SQIPSLQLGF 72

Query: 121 TVTDINSAVTKLMAL-GAELDGSIKYEIHGKVAAMRCIDGHMLGLYE 166
            +TD+   V +L+ + GA           GK A +   DGH + L E
Sbjct: 73  QITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCE 119

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 11/111 (9%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
           +DV +A  F+++ L F+       +A +    + L +       V  N         V  
Sbjct: 14  RDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQ---AWVWVRG 70

Query: 125 INSAVTKLMALGAELDGSIKYEIH--------GKVAAMRCIDGHMLGLYEP 167
           ++    +   + +                   G+  A+R   G+ +     
Sbjct: 71  LDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAE 121

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 20/110 (18%), Positives = 29/110 (26%), Gaps = 6/110 (5%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGP-LKLALMQSPSD--HVVQNGNSSLLSFT 121
           K+  K+  FY   LD      +  +A       L+L L           Q G    LSF 
Sbjct: 15  KNPAKSEEFYKNLLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQ 74

Query: 122 VTDINS---AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
           V           +       +         G        D H L ++   
Sbjct: 75  VNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK 124

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSL----LSF 120
            D+ K+  F+ E L  T++      A L  G L + L    +   V    S       + 
Sbjct: 13  SDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTV 72

Query: 121 TVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCID--GHMLGLYEP 167
              D      +L   G      I  +   + A+   +D  GH L L+  
Sbjct: 73  AEEDFEPLSQRLEQAGVT----IWKQNKSEGASFYFLDPDGHKLELHVG 117

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 39.9 bits (93), Expect = 7e-05
 Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 16/116 (13%)

Query: 65  KDVPKAARFYSEGLDFTVN-VCTLRWAELQSGPLKLALMQSPSDHVV------QNGNSSL 117
            D  +A  FY +   + +  +  + ++ + +GP+  + M     ++           + +
Sbjct: 34  DDGDRARAFYRDAFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTTPV 93

Query: 118 LSFTVTDINSAVTKLMALGAELDGSIKYEIH-----GKVAAMRCIDGHMLGLYEPA 168
           ++  V  I SA+ ++ +LG    G            G  A     +G+++GL+E A
Sbjct: 94  VTVDVESIESALERIESLG----GKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA 145

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 13/115 (11%)

Query: 60  ILQLH------KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG 113
           +  L+       D+P +  FY + L F +     + A L+ G L L L + P        
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAAD 61

Query: 114 NSSL-LSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCID--GHMLGLY 165
            +         D      +L A G         +   +  +   +D  GH L  +
Sbjct: 62  YTHYAFGIAAADFARFAAQLRAHGVREWK----QNRSEGDSFYFLDPDGHRLEAH 112

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 65  KDVPKAARFYSE-GLDFTVNVCTLRWAELQSGP-LKLALMQ-------SPSDHVVQNGNS 115
           +D+ K+  FY + G++      +    E      ++LA           P       G+ 
Sbjct: 13  EDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHR 72

Query: 116 SLLSFTV---TDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
             ++F       ++    +L+  G E        + G + A ++  DG+++ L+ P
Sbjct: 73  FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP 128

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 9/107 (8%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQS-----PSDHVVQNGNSSLLS 119
            D+P    FY + L             L+ G  K+ L Q      P    V+ G++ L  
Sbjct: 19  ADIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCF 78

Query: 120 FTVTDINSAVTKLMALGAE-LDGSI-KYEIHGKVAAMRCID--GHML 162
            T T ++ A+  +   G   ++G + +    G + +    D  G+++
Sbjct: 79  ITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLI 125

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
            DVP    F+ + L F  +     +A ++ G ++L + ++    V  N +       VTD
Sbjct: 14  VDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTS---AWIEVTD 70

Query: 125 INSAVTKLMALGAE 138
            ++   +     + 
Sbjct: 71  PDALHEEWARAVST 84

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 15/115 (13%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLR------WAELQSGPLKLALMQSPSDHVVQNGNSSL- 117
            +      FY E L F V     R        +L+ G  +L +  S       +   +L 
Sbjct: 14  SNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALG 73

Query: 118 ---LSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCI---DGHMLGLYE 166
              L+F V  I   +  L   G E +     +  GK          DG  L L+E
Sbjct: 74  LRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMT--FFFDPDGLPLELHE 126

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 37.6 bits (87), Expect = 8e-04
 Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 15/113 (13%)

Query: 66  DVPKAARFYSEGLDFTVNVCTLRWAE------LQSGPLKLALMQSPSDHVVQNGNSSLLS 119
           D   A +FY+    +  +   +            +G    A+   P              
Sbjct: 42  DQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGAPEGMPPIWNTY 101

Query: 120 FTVTDINSAVTKLMALGAELDGSIKYEIH-----GKVAAMRCIDGHMLGLYEP 167
             V D+++ V K++  G    G +          G+++ +    G  +GL++ 
Sbjct: 102 IAVDDVDAVVDKVVPGG----GQVMMPAFDIGDAGRMSFITDPTGAAVGLWQA 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.89
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.89
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.89
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.89
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.89
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.88
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.88
2i7r_A	118	Conserved domain protein; structural genomics cons	99.88
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.88
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.88
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.88
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.88
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.87
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.87
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.86
3ghj_A	141	Putative integron gene cassette protein; integron	99.86
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.86
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.86
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.86
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.85
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.85
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.85
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.85
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.85
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.85
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.85
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.85
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.85
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.85
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.85
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.85
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.84
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.84
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.84
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.83
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.83
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.83
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.83
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.83
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.82
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.82
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.82
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.81
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.81
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.81
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.8
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.8
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.79
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.79
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.77
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.77
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.76
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.76
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.76
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.75
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.74
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.74
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.73
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.73
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.72
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.72
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.71
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.71
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.71
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.7
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.69
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.69
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.69
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.68
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.68
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.68
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.68
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.67
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.66
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.64
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.64
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.6
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.6
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.57
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.5
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.5
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.48
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.48
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.43
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.33
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.31
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.27
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.25
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.23
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.18
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.92
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.83
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.8
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.57
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	98.12
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.95
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.76
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.82
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.3
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	89.0
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	87.58
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	87.42
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	85.4
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	84.41
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	83.04
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	82.63
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	82.62

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.89  E-value=3.9e-22  Score=137.67  Aligned_cols=118  Identities=17%  Similarity=0.201  Sum_probs=96.9

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCC----cccCCCeEEEEEEeCC-
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDH----VVQNGNSSLLSFTVTD-  124 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~----~~~~~~~~~~~~~v~d-  124 (168)
                      .+|...+++|+.|.|+|+++|++||+++|||++....+.+..+..++..+.+.......    ........|++|.++| 
T Consensus         4 ~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~dd   83 (133)
T 3ey7_A            4 FLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDTV   83 (133)
T ss_dssp             CCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCTTCCTTCCEEEEECSSC
T ss_pred             eEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecCCeEEEEcCCEEEEEEcCCCCccccCCCCCCCccEEEEEeCcH
Confidence            34566799999999999999999999999999999888888888899999998764321    1122344689999997 


Q ss_pred             HHHHHHHHHHCCCeEeccce--eeCCe--EEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIK--YEIHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~--~~~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+++..++.  ....+  +.+||+|||||.|||+|+
T Consensus        84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~  130 (133)
T 3ey7_A           84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTY  130 (133)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEES
T ss_pred             HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEec
Confidence            99999999999999876553  33323  799999999999999986

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.89  E-value=1.5e-22  Score=144.83  Aligned_cols=113  Identities=24%  Similarity=0.257  Sum_probs=85.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--cEEEEEe--C--CeEEEEEeCCCCCc------ccCCCeEEEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--RWAELQS--G--PLKLALMQSPSDHV------VQNGNSSLLSF  120 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--~~~~~~~--~--~~~i~l~~~~~~~~------~~~~~~~~~~~  120 (168)
                      +||+|+.|+|+|+++|++||+++|||++..+.  +  .|..+..  +  ...+.+.....+..      ...+...+++|
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~f  104 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASF  104 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEEE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEEe
Confidence            69999999999999999999999999987653  2  2333332  1  22222222222110      11223456999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          121 TVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .|+|+++++++|+++|+++..++...++|+.+||+|||||+|||+|.
T Consensus       105 ~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          105 AVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC
T ss_pred             eechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEE
Confidence            99999999999999999998888888888999999999999999984

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.89  E-value=3.6e-22  Score=137.47  Aligned_cols=115  Identities=23%  Similarity=0.271  Sum_probs=92.2

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEEEeCCeEEEEEe-------CCCCC----cc-cCC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAELQSGPLKLALMQ-------SPSDH----VV-QNG  113 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~~~~~~~i~l~~-------~~~~~----~~-~~~  113 (168)
                      |+..+++|+.|.|+|+++|++||+++|||++.....      .++.+..++..+.|..       .+...    .+ ..+
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            445789999999999999999999999999987532      2666777888998888       33221    11 233


Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ...+++|.|+|+++++++|+++|+++..++....+| +.+||+|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            456899999999999999999999987666554555 89999999999999987

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.89  E-value=5.3e-22  Score=138.05  Aligned_cols=114  Identities=13%  Similarity=0.142  Sum_probs=95.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-CCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-GPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAVT  130 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~~  130 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+.++.+.. ++..+.|...........+...+++|.|+|   ++++++
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~~dv~~~~~   91 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTPRYVAFPSSGDALFAIWSGGEEPVAEIPRFSEIGIMLPTGEDVDKLFN   91 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECSSEEEEECSTTCEEEEESSSCCCCTTSCCCEEEEEEESSHHHHHHHHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCCCEEEEEcCCCcEEEEEeCCCCCcCCCCCcceEEEEeCCHHHHHHHHH
Confidence            6899999999999999999999999999888778888875 468888877653322233455679999986   999999


Q ss_pred             HHHH---CCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          131 KLMA---LGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       131 ~l~~---~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +|++   +|+++..++...++|+.+||+|||||.|||+++.
T Consensus        92 ~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           92 EWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             HHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             HHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            9999   9999887776667779999999999999999863

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.89  E-value=6.6e-22  Score=136.30  Aligned_cols=113  Identities=15%  Similarity=0.143  Sum_probs=95.1

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHH
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTK  131 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~  131 (168)
                      |+..+..|+.|.|+|+++|++||+++|||++....+.|+.+..++..+.|...+...   .+...+++|.|+|+++++++
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~v~dv~~~~~~   77 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQV---VPDNTQAWVWVRGLDELYAE   77 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSCTT---TGGGCEEEEEEECHHHHHHH
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEecCCCEEEEEECCEEEEEEcCCCCC---CCCceEEEEEECCHHHHHHH
Confidence            334677899999999999999999999999988777888888899999988765321   22335799999999999999


Q ss_pred             HHHC------CC--eEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          132 LMAL------GA--ELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       132 l~~~------G~--~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |+++      |+  ++..++...++|+.+||+|||||.|||+++
T Consensus        78 l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           78 WSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             HTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEe
Confidence            9999      99  777777766667999999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.88  E-value=1e-21  Score=139.06  Aligned_cols=118  Identities=15%  Similarity=0.071  Sum_probs=93.6

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEE------------ecccEEEEEeC-CeEEEEEeCCCCC------cc
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNV------------CTLRWAELQSG-PLKLALMQSPSDH------VV  110 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~------------~~~~~~~~~~~-~~~i~l~~~~~~~------~~  110 (168)
                      ++|+..+|+|+.|.|+|+++|++||+++|||++..            ....++.+..+ +..+.|...+...      ..
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTC
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCC
Confidence            34455899999999999999999999999999987            33456777764 4788888765421      11


Q ss_pred             cCCCeEEEEEEeC--CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          111 QNGNSSLLSFTVT--DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       111 ~~~~~~~~~~~v~--dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ......|++|.|+  |+++++++|+++|+.+..++....+|+.+||+|||||.|||++.
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  151 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCD  151 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEEC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEec
Confidence            2234568999998  99999999999999987665555667899999999999999975

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.88  E-value=9.8e-22  Score=135.06  Aligned_cols=111  Identities=14%  Similarity=0.147  Sum_probs=93.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMA  134 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~  134 (168)
                      .+-.++.|.|+|+++|++||+++|||++....+.++.+..++..+.|...+...   .+...+++|.|+|+++++++|++
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~v~dvd~~~~~l~~   80 (122)
T 1qto_A            4 FLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQI---VADNTSAWIEVTDPDALHEEWAR   80 (122)
T ss_dssp             CCCCCCEEEESSHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSCHH---HHTTCEEEEEESCHHHHHHHHTT
T ss_pred             ccceeEEEEcCCHHHHHHHHHhccCcEEeeCCCCEEEEEECCEEEEEEcCCCCC---CCCceEEEEEECCHHHHHHHHHh
Confidence            555688999999999999999999999988767888888899999988754321   12235799999999999999999


Q ss_pred             C------CC--eEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          135 L------GA--ELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       135 ~------G~--~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +      |+  .+..++...++|+.++|+|||||.|||+++.
T Consensus        81 ~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (122)
T 1qto_A           81 AVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAGE  122 (122)
T ss_dssp             TSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEECC
T ss_pred             hccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecCC
Confidence            9      99  7777777666778899999999999999873

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.88  E-value=7.2e-22  Score=134.51  Aligned_cols=113  Identities=16%  Similarity=0.174  Sum_probs=91.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMA  134 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~  134 (168)
                      ++++|+.|.|+|+++|++||+++|||++....+.++.+..++..+.+...........+...+++|.|+|+++++++|++
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~d~~~~~~~l~~   83 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGIIIHIEVEDVDQNYKRLNE   83 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEETTEEEEEETTEEEEEESSCSSSCCCCCSCEEEEEECSCHHHHHHHHHH
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCCCEEEEEeCCeEEEEEcCCCCCcccCCCeEEEEEEECCHHHHHHHHHH
Confidence            48999999999999999999999999988766678888888877766443211111223335799999999999999999


Q ss_pred             CCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          135 LGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       135 ~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++..++...++| +.+||+|||||.|||++.
T Consensus        84 ~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           84 LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence            999987666644455 899999999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.88  E-value=1.2e-21  Score=135.13  Aligned_cols=114  Identities=20%  Similarity=0.174  Sum_probs=92.2

Q ss_pred             cccccEEEEEeCCHHHHHHHHHhccCCEEEEec---c--cEEEEEe--CCeEEEEEeCCCC-CcccCCCeEEEEEEeCCH
Q 040429           54 AASFRWILQLHKDVPKAARFYSEGLDFTVNVCT---L--RWAELQS--GPLKLALMQSPSD-HVVQNGNSSLLSFTVTDI  125 (168)
Q Consensus        54 ~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~--~~~~~~~--~~~~i~l~~~~~~-~~~~~~~~~~~~~~v~dl  125 (168)
                      ..+++|+.|.|+|+++|++||+++|||++....   +  .|+.+..  ++..+.+...+.. .....+...+++|.|+|+
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~   90 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLITRDI   90 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGGGCSSCCCSCEEEEEEEEESCH
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCcccccccCCCCeEEEEEEeCCH
Confidence            379999999999999999999999999998763   2  4666654  3567777764421 122245567899999999


Q ss_pred             HHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+++..++...++| +.+||+|||||.|||+|.
T Consensus        91 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           91 DEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             HHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             HHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            999999999999998777766666 999999999999999983

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.88  E-value=2.1e-21  Score=137.84  Aligned_cols=118  Identities=20%  Similarity=0.258  Sum_probs=93.6

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCC----CcccCCCeEEEEEEeC-C
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD----HVVQNGNSSLLSFTVT-D  124 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~v~-d  124 (168)
                      .+|+..+++|+.|.|+|++++++||+++|||++....+.++.+..++..+.|......    .........+++|.+. |
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~~~d   96 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNRKALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITSTP   96 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTEEEEEETTEEEEEEETTBCCSSCCSSCCTTCCEEEEEESSC
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCeEEEEeCCeEEEEeccCCcCCCcCcCCCCCccEEEEEecCC
Confidence            3455689999999999999999999999999999988888888888889998875432    1112223457888886 9


Q ss_pred             HHHHHHHHHHCCCeEeccce--eeCCe--EEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIK--YEIHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~--~~~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+++..++.  ....|  +.+||.|||||.|||++.
T Consensus        97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~  143 (152)
T 3huh_A           97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQY  143 (152)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEec
Confidence            99999999999999875543  23333  889999999999999975

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.88  E-value=4.8e-21  Score=133.19  Aligned_cols=115  Identities=10%  Similarity=-0.030  Sum_probs=90.5

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      ...+++|+.|.|+|+++|++||+++|||++....+.|+.+..++..+.+........+......|++|.+.   |+++++
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~h~~~~~~~~~d~~~~~   85 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYPDRITLDFFGDQLVCHLSDRWDREVSMYPRHFGITFRDKKHFDNLY   85 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEETTEEEEEETTEEEEEEECSCSCSSCCSSSCEEEEECSSHHHHHHHH
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCCCcEEEEEeCCEEEEEEcCcccccCCCCCCeEEEEEcChHhHHHHH
Confidence            34789999999999999999999999999988778899888777778877654332112223457888874   599999


Q ss_pred             HHHHHCCCeEecccee---e-CCe-EEEEEECCCCCEEEEEee
Q 040429          130 TKLMALGAELDGSIKY---E-IHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~---~-~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++|+++..++..   + +++ +.+||+|||||.|||++.
T Consensus        86 ~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~  128 (135)
T 3rri_A           86 KLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYY  128 (135)
T ss_dssp             HHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEE
Confidence            9999999988654443   2 233 789999999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.88  E-value=1.7e-21  Score=135.44  Aligned_cols=111  Identities=18%  Similarity=0.143  Sum_probs=89.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEe-cc--cEEEEE-eCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVC-TL--RWAELQ-SGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVT  130 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~-~~--~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~  130 (168)
                      ..|+|+.|.|+|+++|++||++ |||++... .+  .++.+. .++..+.|....... ...+...+++|.|+|++++++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~l~f~v~dvd~~~~   82 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQNPQ-RSQIPSLQLGFQITDLEKTVQ   82 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC-----CCEEEEEETTEEEEEEECCCCS-SCCCCSEEEEEEESCHHHHHH
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCCCEEEEEeCCCeEEEEEECCCCc-CCCCCceEEEEEeCCHHHHHH
Confidence            6899999999999999999999 99998876 43  688887 688888886654322 223334579999999999999


Q ss_pred             HHHHCCCe-EeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          131 KLMALGAE-LDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~~-~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++|++ +..++...++|..++|+|||||.|||.+.
T Consensus        83 ~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~  120 (128)
T 3g12_A           83 ELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCEL  120 (128)
T ss_dssp             HHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC-
T ss_pred             HHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEe
Confidence            99999999 77666666667449999999999999975

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.88  E-value=2.9e-21  Score=131.89  Aligned_cols=115  Identities=22%  Similarity=0.185  Sum_probs=89.6

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----ccE-EEEEeCCeEEEEEeCCCCC----cccCCCeEEEEEE
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----LRW-AELQSGPLKLALMQSPSDH----VVQNGNSSLLSFT  121 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~~~-~~~~~~~~~i~l~~~~~~~----~~~~~~~~~~~~~  121 (168)
                      |+..+++|+.|.|+|+++|++||+++|||++....     ..+ +.+..++..+.|...+...    .+......|++|.
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~   80 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLAFK   80 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCCCCccceEEEEE
Confidence            44579999999999999999999999999987642     234 3466677788888754321    1112334579999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          122 VTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       122 v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      |+|+++++++|+++|+++..++....+| +.+||+|||||.|||+|
T Consensus        81 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           81 VEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             eCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987655544555 89999999999999986

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.87  E-value=1.9e-21  Score=138.54  Aligned_cols=114  Identities=18%  Similarity=0.122  Sum_probs=92.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-CCeEEEEEeCCCCCc--ccCCCeEEEEEEeCC---HHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-GPLKLALMQSPSDHV--VQNGNSSLLSFTVTD---INSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~--~~~~~~~~~~~~v~d---l~~~  128 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+.++.+.. ++..+.+...+....  ...+...+++|.|+|   ++++
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~~dvd~~   84 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEMVDEI   84 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECSSEEEEECTTSCEEEEEEGGGCSSCCC----CEEEEEECSCHHHHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCCCEEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEEEcCCHHHHHHH
Confidence            6899999999999999999999999999888778888887 788888876532211  122334679999987   9999


Q ss_pred             HHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          129 VTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +++|+++|+++..++...++|+.+||+|||||.|||+++.
T Consensus        85 ~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           85 HRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             HHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             HHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            9999999999887777666678999999999999999863

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.87  E-value=5.6e-21  Score=131.47  Aligned_cols=113  Identities=12%  Similarity=0.018  Sum_probs=90.3

Q ss_pred             cccccccEEEEEe--CCHHHHHHHHHhccCCEEEEecc-----cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCC
Q 040429           52 MAAASFRWILQLH--KDVPKAARFYSEGLDFTVNVCTL-----RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD  124 (168)
Q Consensus        52 m~~~~i~hv~l~v--~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d  124 (168)
                      |+..+++|+.|.|  +|+++|++||+++|||++.....     ....+..++..+.|...+...   ++...+++|.|+|
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~f~v~d   82 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQNFN---PAKRAHPAFYVLK   82 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEETTEEEEEEECTTCC---CCSSSCEEEEETT
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeCCEEEEEEecCCCC---CCCceEEEEEcCC
Confidence            3447899999999  89999999999999999987532     334566678888887654321   2334579999999


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +++++++|+++|+.+..++. .++++.+||+|||||.|||+++.
T Consensus        83 ~~~~~~~l~~~G~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           83 IDEFKQELIKQGIEVIDDHA-RPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             HHHHHHHHHHTTCCCEEECS-STTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHcCCCccCCCC-CCCeeEEEEECCCCCEEEEEeCC
Confidence            99999999999999876552 34568999999999999999874

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.86  E-value=1.5e-20  Score=132.41  Aligned_cols=112  Identities=21%  Similarity=0.265  Sum_probs=88.3

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeC--
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVT--  123 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~--  123 (168)
                      .+|+..+++|+.|.|+|+++|++||+++|||++....  ..++.+..+  +..+.|.+.+..     ....+++|.++  
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~~h~~~~v~~~   96 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEEKEN-----WQQQHFSFRVEKS   96 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEECCSS-----CCCCEEEEEECGG
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEeccCCC-----CCCceEEEEEeHH
Confidence            3455588999999999999999999999999998874  356666654  588888876432     22346888886  


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCC-eEEEEEECCCCCEEEEEe
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIH-GKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~DPdGn~iel~e  166 (168)
                      |+++++++|+++|+++..+....++ ++.+||+|||||.|||++
T Consensus        97 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           97 EIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            9999999999999998855555554 489999999999999986

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.86  E-value=2.6e-21  Score=137.46  Aligned_cols=116  Identities=22%  Similarity=0.208  Sum_probs=93.2

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCC------CcccCCCeEEEEEEe---
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD------HVVQNGNSSLLSFTV---  122 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~~~~~~~~~v---  122 (168)
                      |+..+++|+.|.|+|+++|++||+++|||++....+.++.+..++..|.|...+..      .........+++|.|   
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v~~~   80 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNVRAE   80 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECSSEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEECSSG
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCCCEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEeCCH
Confidence            34479999999999999999999999999988776778888888889998875321      001123345799999   


Q ss_pred             CCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          123 TDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       123 ~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++++++|+++|+++..++...++| +.+||+|||||.|||++.
T Consensus        81 ~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  126 (150)
T 3bqx_A           81 TEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFN  126 (150)
T ss_dssp             GGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeC
Confidence            999999999999999987766544444 999999999999999874

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.86  E-value=3.4e-21  Score=131.09  Aligned_cols=112  Identities=15%  Similarity=0.166  Sum_probs=86.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC---CeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHH
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG---PLKLALMQSPSDHVVQNGNSSLLSFTVTDINSA  128 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~  128 (168)
                      |...++ |+.|.|+|+++|++||+++|||++.......+.+..+   +..+.+...+..    .+...+++|.|+|++++
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~----~~~~~~~~~~v~d~~~~   78 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGS----GTDVPDLSIEVDNFDEV   78 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSSEEEEEEEEEEEEEEEEESSSBT----TBCCCSEEEEESCHHHH
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCCEEEEEecCCCCcEEEEEEcCCCC----CCceeEEEEEECCHHHH
Confidence            444678 9999999999999999999999998765444455543   456666543221    12234699999999999


Q ss_pred             HHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          129 VTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      +++|+++|+++..++...++| +.+||+|||||.|||+++.
T Consensus        79 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  119 (119)
T 2pjs_A           79 HARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSHA  119 (119)
T ss_dssp             HHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC-
T ss_pred             HHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEecC
Confidence            999999999987766655555 9999999999999999874

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.86  E-value=7.2e-21  Score=133.28  Aligned_cols=110  Identities=15%  Similarity=0.175  Sum_probs=87.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEE-------EEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC--CH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWA-------ELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT--DI  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~-------~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~--dl  125 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+...       .+..++..+.+...+...   .+...|++|.|+  |+
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~---~~~~~h~~~~v~~~d~   79 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA---ERSYNHIAFKIDDADF   79 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS---SCCSCEEEEECCGGGH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCCC---CCCeeEEEEEcCHHHH
Confidence            689999999999999999999999999987644222       455688888888754321   234457999998  99


Q ss_pred             HHHHHHHHHCCCeEeccce-eeCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIK-YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+.+..++. ..++++.+||+|||||.|||++.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           80 DRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             HHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            9999999999999876544 33455899999999999999984

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.85  E-value=2.8e-20  Score=129.68  Aligned_cols=110  Identities=21%  Similarity=0.204  Sum_probs=89.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeC--CHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVT--DINSAVTKL  132 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~--dl~~~~~~l  132 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+....+..++..+.+...+.. ....+...|++|.|+  |+++++++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~h~~~~v~~~d~~~~~~~l   81 (135)
T 1nki_A            3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQY-GGPAADYTHYAFGIAAADFARFAAQL   81 (135)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEEETTEEEEEEECTTC-CCCCSSSCEEEEEECHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCCceEEecCCEEEEEEeCCCC-CCCCCCcceEEEEccHHHHHHHHHHH
Confidence            68999999999999999999999999998765555666778888888875421 112233457999997  999999999


Q ss_pred             HHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          133 MALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       133 ~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++|+++..++..  +++.+||+|||||.|||+++
T Consensus        82 ~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           82 RAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             HHTTCCEEECCCS--SSCEEEEECTTCCEEEEESC
T ss_pred             HHCCCceecCCCC--CeEEEEEECCCCCEEEEEEC
Confidence            9999998765532  56899999999999999986

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.85  E-value=1.5e-20  Score=131.55  Aligned_cols=112  Identities=19%  Similarity=0.276  Sum_probs=90.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--cEEEEEe-CCeEEEEEeCC-------CCCcccCCCeEEEEEEeC-
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--RWAELQS-GPLKLALMQSP-------SDHVVQNGNSSLLSFTVT-  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~~~~~~~-~~~~i~l~~~~-------~~~~~~~~~~~~~~~~v~-  123 (168)
                      .++.|+.|.|+|+++|++||++ |||++....+  .++.+.. ++..+.+...+       .......+...+++|.|+ 
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   81 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPD   81 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGCSEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEECSS
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCCceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEEeCC
Confidence            6899999999999999999999 9999876543  4787776 77888887632       111122344568999999 


Q ss_pred             --CHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 --DINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 --dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                        |+++++++|+++|+++..++...++| +.+||+|||||.|||+++
T Consensus        82 ~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  128 (138)
T 2a4x_A           82 TASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  128 (138)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeC
Confidence              99999999999999988766655555 899999999999999986

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.85  E-value=8.1e-21  Score=131.56  Aligned_cols=110  Identities=15%  Similarity=0.205  Sum_probs=86.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEE-------EEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe--CCH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWA-------ELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV--TDI  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~-------~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl  125 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+...       .+..++..+.+...+...   .+...|++|.|  +|+
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~h~~~~v~~~d~   79 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQ---ERTYNHIAFQIQSEEV   79 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSCC---CCCSCEEEEECCGGGH
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCCC---CCCeeEEEEEcCHHHH
Confidence            689999999999999999999999999876543322       566678888887754321   23345799999  599


Q ss_pred             HHHHHHHHHCCCeEecccee-eCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKY-EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+++..++.. .++++.+||+|||||.|||+++
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (133)
T 2p7o_A           80 DEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAG  122 (133)
T ss_dssp             HHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECS
T ss_pred             HHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcC
Confidence            99999999999998766543 3455899999999999999986

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.85  E-value=1.7e-20  Score=132.76  Aligned_cols=114  Identities=17%  Similarity=0.179  Sum_probs=93.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC-CeEEEEEeCCCCCc--ccCCCeEEEEEEeC---CHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG-PLKLALMQSPSDHV--VQNGNSSLLSFTVT---DINSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~--~~~~~~~~~~~~v~---dl~~~  128 (168)
                      .++.|+.|.|+|++++++||+++|||++....+.++.+..+ +..|.|...+....  ...+...+++|.|+   |++++
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hl~f~v~d~~dv~~~  103 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSPTFSLFVLANGMKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDET  103 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEETTEEEEECTTSCEEEEEETTSCSSCCCCSSSSCEEEEECSSHHHHHHH
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCCCeEEEEcCCCcEEEEEeCCCCCCccCCCCCceEEEEEeCCHHHHHHH
Confidence            48999999999999999999999999988776778888775 57888876543211  12234568999997   58999


Q ss_pred             HHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          129 VTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      +++|+++|+++..++...++|+.+||+|||||.|||+++.
T Consensus       104 ~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A          104 FAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             HHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             HHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence            9999999999887777667789999999999999999873

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.85  E-value=4e-20  Score=129.78  Aligned_cols=111  Identities=23%  Similarity=0.218  Sum_probs=90.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCC--cccCCCeEEEEEEeC--CHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDH--VVQNGNSSLLSFTVT--DINSAVT  130 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~~~~~~~~~~~v~--dl~~~~~  130 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+..+.+..++..+.|...+...  ....+...|++|.|+  |++++++
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~~~d~~~~~~   82 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQ   82 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHHHHHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecCCcEEEEECCEEEEEEECCCCCCCCCCCCCceEEEEEeCHHHHHHHHH
Confidence            689999999999999999999999999988755566677788888887754321  112234467999996  9999999


Q ss_pred             HHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          131 KLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++|+++..++.  .+++.+||+|||||.|||+++
T Consensus        83 ~l~~~G~~~~~~~~--~~~~~~~~~DPdG~~iel~~~  117 (141)
T 1npb_A           83 RLEQAGVTIWKQNK--SEGASFYFLDPDGHKLELHVG  117 (141)
T ss_dssp             HHHHTTCCEEECCC--SSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHCCCeEeccCC--CceeEEEEECCCCCEEEEEEC
Confidence            99999999876553  356899999999999999986

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.85  E-value=2.3e-20  Score=132.17  Aligned_cols=117  Identities=16%  Similarity=0.156  Sum_probs=92.8

Q ss_pred             ccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCC-----CcccCCCeEEEEEEeC
Q 040429           49 RRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD-----HVVQNGNSSLLSFTVT  123 (168)
Q Consensus        49 ~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~~~~~~~~~v~  123 (168)
                      .++|+..+|+|+.|.|+|+++|++||+++|||++....+.+..+..++..+.|......     ..+..+ ..+++|.+.
T Consensus        20 m~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~g-~~~~~~~~~   98 (147)
T 3zw5_A           20 FQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDRKALCFGDQKFNLHEVGKEFEPKAAHPVPG-SLDICLITE   98 (147)
T ss_dssp             HHHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCSSCCTT-CCEEEEECS
T ss_pred             ecceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCCCceEEEECCcEEEEEEcCCCcCcccCCCCCC-CceEEEEec
Confidence            45666689999999999999999999999999999887778888888888888774322     112223 345777775


Q ss_pred             -CHHHHHHHHHHCCCeEeccce--eeCCe--EEEEEECCCCCEEEEEe
Q 040429          124 -DINSAVTKLMALGAELDGSIK--YEIHG--KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 -dl~~~~~~l~~~G~~~~~~~~--~~~~g--~~~~~~DPdGn~iel~e  166 (168)
                       |+++++++|+++|+.+...+.  .+..|  +.+||+|||||.|||.+
T Consensus        99 ~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           99 VPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             SCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             cCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence             999999999999999874432  33333  68999999999999986

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.85  E-value=7.1e-20  Score=130.26  Aligned_cols=113  Identities=19%  Similarity=0.299  Sum_probs=89.1

Q ss_pred             ccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEe-cccEEEEEeCCeE------------EEEEeCCCCCcccCCCe
Q 040429           49 RRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVC-TLRWAELQSGPLK------------LALMQSPSDHVVQNGNS  115 (168)
Q Consensus        49 ~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~-~~~~~~~~~~~~~------------i~l~~~~~~~~~~~~~~  115 (168)
                      ..+|. .++.|+.|.|+|+++|++||+++|||++... ...++.+..++..            ..+...+.     ... 
T Consensus        19 ~~gM~-~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-----~~g-   91 (148)
T 2r6u_A           19 FQGMT-GRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGE-----VTT-   91 (148)
T ss_dssp             CSTTC-CCEEEEEEEESSHHHHHHHHHHHHCCEEEEETTTTEEEEECSCBCTTSSBCSSSCBCEEEEESSS-----SCS-
T ss_pred             ccccC-CceEEEEEEeCCHHHHHHHHHHccCcEEEECCCCCEEEEEeCCcceeecccCCcccccceeecCC-----CCe-
Confidence            34555 6899999999999999999999999999875 3467777765543            33333221     122 


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEeccceeeC-CeEEEEEECCCCCEEEEEeeC
Q 040429          116 SLLSFTVTDINSAVTKLMALGAELDGSIKYEI-HGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       116 ~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~DPdGn~iel~e~~  168 (168)
                      .+++|.|+|+++++++|+++|+++..++...+ +|+.+||+|||||.|||+++.
T Consensus        92 ~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence            37999999999999999999999887665555 579999999999999999873

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.85  E-value=1.3e-20  Score=131.41  Aligned_cols=114  Identities=24%  Similarity=0.267  Sum_probs=88.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cEEE--EEeCCeEEEEEeCCCCCc----ccCCCeEEEEEE
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RWAE--LQSGPLKLALMQSPSDHV----VQNGNSSLLSFT  121 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~~--~~~~~~~i~l~~~~~~~~----~~~~~~~~~~~~  121 (168)
                      |+..+++|+.|.|+|+++|++||+++|||++....+    .+..  +. ++..|.|.+.+....    .......+++|.
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            444789999999999999999999999999887532    1332  33 778899887643211    122334689999


Q ss_pred             e---CCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          122 V---TDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       122 v---~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |   +|+++++++|+++|+.+.. +...++|+.+||+|||||.|||++.
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g~~~~~~DPdG~~iel~~~  127 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADNIALEAMLG  127 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBCC-CEEETTEEEEEEECTTCCEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHCCCcccC-ccccCCceEEEEECCCCCEEEEEEc
Confidence            9   8999999999999999764 4445567999999999999999986

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.85  E-value=8.7e-20  Score=125.79  Aligned_cols=110  Identities=20%  Similarity=0.224  Sum_probs=90.4

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHC
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMAL  135 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~  135 (168)
                      +..++.|.|+|+++|++||++ |||++....+.|+.+..++..+.|...+... + .+...+++|.|+|+++++++|+++
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-~~~~~~~~~~v~dv~~~~~~l~~~   79 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHPGLD-P-LASWFSCCLRLDDLAEFYRQCKSV   79 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEECSSEEEEEETTEEEEEEECTTCC-G-GGCCCEEEEEESCHHHHHHHHHHT
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEecCCCEEEEEeCCEEEEEEeCCCCC-C-CCcceEEEEEECCHHHHHHHHHHC
Confidence            345789999999999999998 9999988777898888899899988755421 1 123457999999999999999999


Q ss_pred             CCeE-------eccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          136 GAEL-------DGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       136 G~~~-------~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      |+++       ..++...++| +.++|+|||||.|||+++.
T Consensus        80 G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           80 GIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             TCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             CCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            9984       5555555556 9999999999999999863

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.85  E-value=5.3e-20  Score=128.41  Aligned_cols=114  Identities=20%  Similarity=0.223  Sum_probs=88.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCC-cccCCCeEEEEEEeCCHHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDH-VVQNGNSSLLSFTVTDINSAVTKLM  133 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~~~~v~dl~~~~~~l~  133 (168)
                      .+-.+..|.|+|+++|++||+++|||++....+.++.+..++..+.|...+... .+..+...+++|.|+|+++++++|+
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv~~~~~~l~   85 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIPDGIARVAICIDVSDIDSLHTKLS   85 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEETTEEEEEETTEEEEEEECCCC---------EEEEEECSCHHHHHHHHH
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCCCeEEEEECCEEEEEEeCCCCCcCCCCCceEEEEEEeCCHHHHHHHHH
Confidence            344556899999999999999999999998877899998899999998865432 1222234579999999999999998


Q ss_pred             HCCC----eEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          134 ALGA----ELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       134 ~~G~----~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      ++|+    ++..++...++| +.++|+|||||.|||.++.
T Consensus        86 ~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           86 PALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             hcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            6554    445556655666 8999999999999999863

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=8.3e-20  Score=126.31  Aligned_cols=113  Identities=15%  Similarity=0.131  Sum_probs=86.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----c--EEEEEeC----CeEEEEEeCCCCC-cccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----R--WAELQSG----PLKLALMQSPSDH-VVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~--~~~~~~~----~~~i~l~~~~~~~-~~~~~~~~~~~~~v~  123 (168)
                      ++++|+.|.|+|+++|++||+++|||++.....    .  ++.+..+    +..+.+....... ........|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            378999999999999999999999999887531    2  3344443    4678777543221 112224568999999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCe--EEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++|+++|+++..++...++|  +.+||+|||||.|||+++
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~  126 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  126 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEec
Confidence            99999999999999988766554444  678999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.85  E-value=1.3e-20  Score=130.55  Aligned_cols=112  Identities=16%  Similarity=0.196  Sum_probs=87.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec---c----cEEEEEeCCeEEEEEeCCCCCcc------cCCCeEEEEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT---L----RWAELQSGPLKLALMQSPSDHVV------QNGNSSLLSFT  121 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~----~~~~~~~~~~~i~l~~~~~~~~~------~~~~~~~~~~~  121 (168)
                      .+++|+.|.|+|+++|++||+ +|||++....   +    ..+.+..++..+.|.+......+      ......|++|.
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~   84 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYE   84 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEEE
Confidence            789999999999999999999 9999986542   1    24445568888888874332111      12345589999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccc--eeeCCe-EEEEEECCCCCEEEEEee
Q 040429          122 VTDINSAVTKLMALGAELDGSI--KYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       122 v~dl~~~~~~l~~~G~~~~~~~--~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |+|+++++++|+++|+++..++  ..+.+| +.+|++|||||+|||+|.
T Consensus        85 v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           85 VEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             ESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             cCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            9999999999999999987654  334445 899999999999999983

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.85  E-value=2.3e-20  Score=128.38  Aligned_cols=113  Identities=21%  Similarity=0.250  Sum_probs=89.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec------ccEEEEEeCCeEEEEEeCCCCCc--------ccCCCeEEEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT------LRWAELQSGPLKLALMQSPSDHV--------VQNGNSSLLSF  120 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~------~~~~~~~~~~~~i~l~~~~~~~~--------~~~~~~~~~~~  120 (168)
                      .+++|+.|.|+|+++|++||+++|||++....      ..++.+..++..+.|........        ...+...|++|
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~~   83 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICI   83 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEEE
Confidence            68999999999999999999999999987642      13566667888888876543221        12345578999


Q ss_pred             EeCCHHHHHHHHHHCCCeEecc-ceeeCCe-EEEEE--ECCCCCEEEEEee
Q 040429          121 TVTDINSAVTKLMALGAELDGS-IKYEIHG-KVAAM--RCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~dl~~~~~~l~~~G~~~~~~-~~~~~~g-~~~~~--~DPdGn~iel~e~  167 (168)
                      .|+|+++++++|+++|+.+..+ +..+.+| +..++  +|||||.|||+|.
T Consensus        84 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           84 EVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999997654 5566666 56666  8999999999984

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.85  E-value=1.3e-19  Score=126.43  Aligned_cols=111  Identities=15%  Similarity=0.217  Sum_probs=89.4

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEEEeCCeEEEEEeCCCCC--cccCCCeE-EEEEEeCCHHHH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAELQSGPLKLALMQSPSDH--VVQNGNSS-LLSFTVTDINSA  128 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~~~~~~i~l~~~~~~~--~~~~~~~~-~~~~~v~dl~~~  128 (168)
                      ..++.|.|+|+++|++||+++|||++....+     .++.+..++..+.|.......  ....+... +++|.|+|++++
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~   82 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVDEH   82 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTCCSSCEECCCCCCCEEEEEESCHHHH
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCCCcCccCCCCCcEEEEEEEeCCHHHH
Confidence            3468999999999999999999999986532     388888888888887643221  11222334 799999999999


Q ss_pred             HHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          129 VTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +++|+++|+++..++...++| +.++|+|||||.|||+++
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  122 (137)
T 3itw_A           83 FMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRH  122 (137)
T ss_dssp             HHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEEC
T ss_pred             HHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEE
Confidence            999999999988777665555 999999999999999986

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.84  E-value=4.3e-20  Score=126.49  Aligned_cols=111  Identities=13%  Similarity=0.123  Sum_probs=86.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec----ccE--EEEEe-CCeEEEEEeCCCCCcc---cCCCeEEEEEEeCC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----LRW--AELQS-GPLKLALMQSPSDHVV---QNGNSSLLSFTVTD  124 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~~~--~~~~~-~~~~i~l~~~~~~~~~---~~~~~~~~~~~v~d  124 (168)
                      ++++|+.|.|+|+++|++||+++|||++....    ..+  ..+.. ++..+.|...+.....   ......|++|.|+|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d   81 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGT   81 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSS
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCC
Confidence            68999999999999999999999999987652    122  22232 5788888876533211   22334679999999


Q ss_pred             ---HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          125 ---INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       125 ---l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                         +++++++|+++|+++..++....+| +.+||+|||||.|||+
T Consensus        82 ~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           82 KEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence               8899999999999988766655555 8899999999999996

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.84  E-value=1.1e-20  Score=135.84  Aligned_cols=117  Identities=12%  Similarity=0.129  Sum_probs=90.1

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-cEEEEEeCCeEEEEEeCCCC-------C-ccc-CCCeEEEEE
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-RWAELQSGPLKLALMQSPSD-------H-VVQ-NGNSSLLSF  120 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-~~~~~~~~~~~i~l~~~~~~-------~-~~~-~~~~~~~~~  120 (168)
                      +|...+++|+.|.|+|+++|++||+++|||++....+ ..+.+..++..+.+......       . ... .....+++|
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~f   82 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFCF   82 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETTTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEEE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCCcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEEE
Confidence            4555799999999999999999999999999988754 44445567777777643211       0 011 112357999


Q ss_pred             Ee---CCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          121 TV---TDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v---~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .|   +|+++++++|+++|+++..++....+++.+||+|||||.|||+++
T Consensus        83 ~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  132 (160)
T 3r4q_A           83 YADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEG  132 (160)
T ss_dssp             EESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEG
T ss_pred             EeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeC
Confidence            99   999999999999999987555444566999999999999999985

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.84  E-value=5.8e-20  Score=132.09  Aligned_cols=114  Identities=17%  Similarity=0.211  Sum_probs=91.1

Q ss_pred             cccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEEEeCCeEEEEEeCCCCCc-------ccCCCeEEEEE
Q 040429           54 AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAELQSGPLKLALMQSPSDHV-------VQNGNSSLLSF  120 (168)
Q Consensus        54 ~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~~~~~~~i~l~~~~~~~~-------~~~~~~~~~~~  120 (168)
                      ..+++|+.|.|+|+++|++||+++|||++.....      .++.+..++..|.|........       ....+..|++|
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hiaf   85 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAI   85 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEEE
Confidence            3689999999999999999999999999887521      4566677888888887543321       11234568999


Q ss_pred             EeCCHHHHHHHHHHCCCeEecc-ceeeCCe-EEEEE--ECCCCCEEEEEee
Q 040429          121 TVTDINSAVTKLMALGAELDGS-IKYEIHG-KVAAM--RCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~dl~~~~~~l~~~G~~~~~~-~~~~~~g-~~~~~--~DPdGn~iel~e~  167 (168)
                      .|+|+++++++|+++|+.+..+ +....+| +.+|+  .|||||.|||+|+
T Consensus        86 ~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~  136 (161)
T 3oa4_A           86 GVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEK  136 (161)
T ss_dssp             ECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEec
Confidence            9999999999999999998766 6666666 66666  3999999999986

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=8e-20  Score=128.64  Aligned_cols=113  Identities=17%  Similarity=0.147  Sum_probs=85.5

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----c--EEEEEeC----CeEEEEEeCCCC-CcccCCCeEEEE
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----R--WAELQSG----PLKLALMQSPSD-HVVQNGNSSLLS  119 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~--~~~~~~~----~~~i~l~~~~~~-~~~~~~~~~~~~  119 (168)
                      .|+..+++|+.|.|+|+++|++||+++|||++.....    .  ++.+..+    +..|.|.+.... ..+......+++
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~   82 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   82 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEE
Confidence            3555899999999999999999999999999986531    2  3455554    478888775432 112233456899


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccceeeCCeE-EEEEECCCCCEEEEEee
Q 040429          120 FTVTDINSAVTKLMALGAELDGSIKYEIHGK-VAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       120 ~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~DPdGn~iel~e~  167 (168)
                      |.|+|+++++++|+++|+.+..+    ++.+ ++||+|||||.|||+++
T Consensus        83 f~v~d~~~~~~~l~~~G~~~~~~----~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           83 IGVEDVKELVADMRKHDVPIDYE----DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE----CSSSSEEEEECTTSCEEEEEEH
T ss_pred             EEeCCHHHHHHHHHHCCCEEecc----CCcEEEEEEECCCCCEEEEEEc
Confidence            99999999999999999997654    3334 45999999999999975

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.84  E-value=8.6e-20  Score=146.10  Aligned_cols=153  Identities=14%  Similarity=0.102  Sum_probs=109.1

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchh------hhccccccccccccccEEEEEeCCHHHHHHHHHhccCCE
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEV------RERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFT   81 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~   81 (168)
                      +..++.+.+   .+|+|..+++..+..........      .....+.++|...+++|+.|.|+|++++++||+++|||+
T Consensus       102 ~~~~~~~~f---~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~  178 (339)
T 3lm4_A          102 FGYGKTFEY---QSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFR  178 (339)
T ss_dssp             TTBCCEEEE---ECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCE
T ss_pred             CCceEEEEE---ECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCe
Confidence            445665544   56899999998876554321110      011122345666899999999999999999999999999


Q ss_pred             EEEecc----cEEEEE---eCCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHHHHHHHCCCeEe-ccceeeCCe-
Q 040429           82 VNVCTL----RWAELQ---SGPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAVTKLMALGAELD-GSIKYEIHG-  149 (168)
Q Consensus        82 ~~~~~~----~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~~~l~~~G~~~~-~~~~~~~~g-  149 (168)
                      +.....    ....+.   ..++.+++...+.+   ..+...|++|.|+|   +++.+++|+++|+++. ++.+++.++ 
T Consensus       179 ~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~~~---~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~  255 (339)
T 3lm4_A          179 TTERVVDGNVEIGAWMSSNLLGHEVACMRDMTG---GHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQS  255 (339)
T ss_dssp             EEEEEEETTEEEEEEEESSSSSCSEEEEECTTS---CCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGE
T ss_pred             EEEEEecCCcEEEEEEEeCCCceEEEEeccCCC---CCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCc
Confidence            987631    123332   24578888764322   24456789999999   7778899999999986 444555554 


Q ss_pred             EEEEEECCCCCEEEEEe
Q 040429          150 KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       150 ~~~~~~DPdGn~iel~e  166 (168)
                      +++||+|||||+|||++
T Consensus       256 ~~~y~~DPdG~~iEl~~  272 (339)
T 3lm4_A          256 QFLYVFEPGGNRIELFG  272 (339)
T ss_dssp             EEEEEECTTSCEEEEEC
T ss_pred             eEEEEEcCCCCEEEEEE
Confidence            89999999999999985

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.83  E-value=9e-20  Score=127.95  Aligned_cols=112  Identities=15%  Similarity=0.180  Sum_probs=88.1

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe--cccEEEEEeCCeEEEEEeCC------CCCc-ccCCCeEEEEEEeC---
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC--TLRWAELQSGPLKLALMQSP------SDHV-VQNGNSSLLSFTVT---  123 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~~~~~~~~~~~~~i~l~~~~------~~~~-~~~~~~~~~~~~v~---  123 (168)
                      +++|+.|.|+|+++|++||+++|||++...  .+.++.+..++..+.+....      .... ...+...+++|.|+   
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~   87 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIKFLLNFDVDTKE   87 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBTTEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCCEEEEEECSCHH
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCCceEEeecCCEEEEEcCccccccccccccCCCCCCeEEEEEEcCCHH
Confidence            899999999999999999999999998754  34677777777778775421      0111 11222348999998   


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCC-eEEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIH-GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++|+++|+++..++...++ ++.+||+|||||.|||+++
T Consensus        88 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  132 (141)
T 2rbb_A           88 AVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNV  132 (141)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEE
T ss_pred             HHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEc
Confidence            5999999999999998776665444 5999999999999999986

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.83  E-value=1.9e-19  Score=126.96  Aligned_cols=112  Identities=21%  Similarity=0.318  Sum_probs=85.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----------------ccEEEEEeC--CeEEEEEeC--CCCC-----
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----------------LRWAELQSG--PLKLALMQS--PSDH-----  108 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----------------~~~~~~~~~--~~~i~l~~~--~~~~-----  108 (168)
                      .+++|+.|.|+|+++|++||++ |||++....                 ..++.+..+  +..|.|.+.  +...     
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~   88 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRT   88 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTT
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccC
Confidence            6899999999999999999999 999987542                 124555543  367777653  2211     


Q ss_pred             -cccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          109 -VVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       109 -~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                       ........|++|.|+|+++++++|+++|+++..++...++| +.+||+|||||.|||+++
T Consensus        89 ~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  149 (153)
T 1ss4_A           89 APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  149 (153)
T ss_dssp             CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             CCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEec
Confidence             11122345899999999999999999999988776544344 899999999999999986

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.83  E-value=5.5e-20  Score=130.48  Aligned_cols=113  Identities=19%  Similarity=0.170  Sum_probs=84.6

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS  127 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~  127 (168)
                      |...++. +.|.|+|+++|++||+++|||++.....    .+.....++  +.+...+... ..+....+++|.|+|+++
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~-~~~~~~~hl~f~V~d~d~   78 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIST--ILLIAGSEEA-LKPFRNTQATFLVDSLDK   78 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEETT--EEEEESCHHH-HGGGGGCCEEEEESCHHH
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEecc--EEEecCCccc-CCCCcceEEEEEeCCHHH
Confidence            3334566 8999999999999999999999876531    233333344  4444443211 112234579999999999


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      ++++|+++|+++..++...++|+.+||+|||||.|||+|+.
T Consensus        79 ~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           79 FKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             HHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999887777667789999999999999999863

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.83  E-value=5.6e-20  Score=134.76  Aligned_cols=116  Identities=17%  Similarity=0.157  Sum_probs=88.1

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cEE--EEEeC-------------------CeEEEEEeCCC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RWA--ELQSG-------------------PLKLALMQSPS  106 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~--~~~~~-------------------~~~i~l~~~~~  106 (168)
                      ....+++|+.|.|+|+++|++||+++|||++.....    .+.  .+..+                   +..+.|.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            334799999999999999999999999999887532    222  22222                   35777754332


Q ss_pred             CC----------cccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          107 DH----------VVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       107 ~~----------~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ..          ........|++|.|+|+++++++|+++|+++..++....++.++||+|||||.|||+|+
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  180 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNP  180 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEc
Confidence            11          11123456899999999999999999999988776656666788999999999999986

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.83  E-value=2.2e-19  Score=141.93  Aligned_cols=145  Identities=15%  Similarity=0.187  Sum_probs=105.5

Q ss_pred             CCCCCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec
Q 040429            7 RPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT   86 (168)
Q Consensus         7 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~   86 (168)
                      .|+.++.+.   +.||+|..+++.........+..      +.......+++|+.|.|+|+++|++||+++|||++....
T Consensus       101 ~~~~~~~~~---~~DPdG~~iel~~~~~~~~~~~~------~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~  171 (310)
T 3b59_A          101 TPGGGYGFR---FFSPDGLLFEVSSDVAKGAKRDL------ARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWL  171 (310)
T ss_dssp             STTCCEEEE---EECTTSCEEEEEECCCCCCCCCC------CTTCCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEE
T ss_pred             ccCCceEEE---EECCCCCEEEEEEcccccCCCcc------CCCCCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEee
Confidence            355566664   36688999998776554332211      112233379999999999999999999999999998764


Q ss_pred             c-cEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHH---HHHHHHCCCeEecc-ceeeCCe-EEEEEECCC
Q 040429           87 L-RWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSA---VTKLMALGAELDGS-IKYEIHG-KVAAMRCID  158 (168)
Q Consensus        87 ~-~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~---~~~l~~~G~~~~~~-~~~~~~g-~~~~~~DPd  158 (168)
                      . ....+..  .++.+++...+       ....|++|.|+|++++   +++|+++|+++... .++..++ +++||+|||
T Consensus       172 ~~~~~fl~~~~~~~~l~l~~~~-------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPd  244 (310)
T 3b59_A          172 GDFMCFLRCNSAHHRIAILPGP-------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPG  244 (310)
T ss_dssp             TTTEEEEESSSBSCSEEEEESS-------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTT
T ss_pred             CCeEEEEecCCCcceEEEECCC-------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCC
Confidence            3 2333333  46778877643       2356799999998887   99999999987644 4455544 899999999


Q ss_pred             CCEEEEEee
Q 040429          159 GHMLGLYEP  167 (168)
Q Consensus       159 Gn~iel~e~  167 (168)
                      ||.|||++.
T Consensus       245 G~~iE~~~~  253 (310)
T 3b59_A          245 GFVTEYTSE  253 (310)
T ss_dssp             SCEEEEEEC
T ss_pred             CCEEEEEeC
Confidence            999999874

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.83  E-value=2.7e-19  Score=126.19  Aligned_cols=111  Identities=12%  Similarity=0.089  Sum_probs=85.7

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe--cccEEEEEeCCeEEEEEeCCCC---------CcccCCCeEEEEEEeCC
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC--TLRWAELQSGPLKLALMQSPSD---------HVVQNGNSSLLSFTVTD  124 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~~~~~~~~~~~~~i~l~~~~~~---------~~~~~~~~~~~~~~v~d  124 (168)
                      .-..+.|.|+|+++|++||+++|||++...  .+.++.+..++..+.|......         ..+..... .++|.|+|
T Consensus         5 ~~~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v~d   83 (145)
T 2rk9_A            5 LRVVPELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDVID   83 (145)
T ss_dssp             CCEEEEEEESSHHHHHHHHHHTTCCEEEEEEGGGTEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEECSC
T ss_pred             ccceEEEEECCHHHHHHHHHhccCCEEEeecCCCCEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEECC
Confidence            334578999999999999999999999853  3578888888888888765211         01111223 49999999


Q ss_pred             HHHHHHHHHH-CCCeEecccee--------eCCeEEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMA-LGAELDGSIKY--------EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~-~G~~~~~~~~~--------~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|++ +|+++..++..        .++++.++|+|||||.|||+++
T Consensus        84 vd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~  135 (145)
T 2rk9_A           84 IEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQD  135 (145)
T ss_dssp             HHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEc
Confidence            9999999999 99998766552        3344889999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.83  E-value=1.2e-19  Score=122.40  Aligned_cols=106  Identities=13%  Similarity=0.139  Sum_probs=85.2

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec-ccEEEEEe-CCeEEEEEeCCCCCcccCCCeEEEEEEe---CCHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-LRWAELQS-GPLKLALMQSPSDHVVQNGNSSLLSFTV---TDINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-~~~~~~~~-~~~~i~l~~~~~~~~~~~~~~~~~~~~v---~dl~~~~  129 (168)
                      ++++|+.|.|+|+++|++||+++|||++.... ..++.+.. ++..+.+.+.+...   .+...+++|.|   +|+++++
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~v~~~~d~~~~~   78 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQ---YPKTFHVGFPQESEEQVDKIN   78 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETTTEEEEECTTCCEEEEEECSSCC---CCTTCCEEEECSSHHHHHHHH
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCCCcEEEEEcCCCcEEEEEeCCCCC---CCceeEEEEEcCCHHHHHHHH
Confidence            58999999999999999999999999998764 35666655 45778887754321   12345799999   8999999


Q ss_pred             HHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          130 TKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                      ++|+++|+++..+ .... ++.+||+|||||.|||+
T Consensus        79 ~~l~~~G~~~~~p-~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           79 QRLKEDGFLVEPP-KHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHTTCCCCCC-EEC--CEEEEEEETTTEEEEEE
T ss_pred             HHHHHCCCEEecC-cCCC-cEEEEEECCCCcEEEEe
Confidence            9999999997654 4333 78999999999999997

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.83  E-value=9.1e-19  Score=136.91  Aligned_cols=139  Identities=16%  Similarity=0.190  Sum_probs=101.1

Q ss_pred             EeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec----ccEEEEE
Q 040429           18 VLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----LRWAELQ   93 (168)
Q Consensus        18 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~~~~~~~   93 (168)
                      .+.||.|..+++..........    ....+      .++.|+.|.|+|++++++||+++|||++....    ..|+.+.
T Consensus       136 ~~~DP~G~~i~l~~~~~~~~~~----~~~~~------~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~  205 (282)
T 3oxh_A          136 FITDPTGAAVGLWQANRHIGAT----LVNET------GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLK  205 (282)
T ss_dssp             EEECTTCCEEEEEEESSCCSCS----BCSST------TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEE
T ss_pred             EEECCCCCEEEEEEccccCCcc----ccCCC------CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEE
Confidence            4467888888887654422110    00111      57999999999999999999999999998754    3577777


Q ss_pred             eCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCC-eEEEEEECCCCCEEEEEeeC
Q 040429           94 SGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIH-GKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus        94 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~DPdGn~iel~e~~  168 (168)
                      .++..+.......  ........+++|.|+|+++++++++++|+++..++...++ ++++||+|||||.|||+++.
T Consensus       206 ~~~~~~~~~~~~~--~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          206 AGDAEVGGCMEPP--MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             ETTEEEEEEECCS--STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCccEeeecCCC--CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecC
Confidence            7766554332221  1122344579999999999999999999998766664455 79999999999999999974

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.82  E-value=1.5e-19  Score=126.83  Aligned_cols=113  Identities=16%  Similarity=0.222  Sum_probs=88.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----c-cEEEEEeCC------eEEEEEeCCCCCcc-------cC--C
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----L-RWAELQSGP------LKLALMQSPSDHVV-------QN--G  113 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~-~~~~~~~~~------~~i~l~~~~~~~~~-------~~--~  113 (168)
                      .+++|+.|.|+|+++|++||+++|||++....     . .++.+..++      ..|.|.+......+       ..  .
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   87 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   87 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCC
Confidence            68999999999999999999999999988653     1 356666655      67888775432111       11  3


Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEe-ccceeeCCe-EEEEE--ECCCCCEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELD-GSIKYEIHG-KVAAM--RCIDGHMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~-~~~~~~~~g-~~~~~--~DPdGn~iel~e~  167 (168)
                      ...|++|.|+|+++++++|+++|+.+. .++....+| +.+|+  +|||||.|||+++
T Consensus        88 g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~  145 (148)
T 1jc4_A           88 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  145 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             ceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEec
Confidence            446899999999999999999999987 456665666 56666  9999999999986

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.82  E-value=2.7e-19  Score=126.79  Aligned_cols=113  Identities=11%  Similarity=0.097  Sum_probs=87.7

Q ss_pred             ccccEEEEEeCCHHHHHHHH---HhccCCEEEEecccEEEEEeCCeEEEEEeCCCC---Cc--ccCCCeEEEEEEeC---
Q 040429           55 ASFRWILQLHKDVPKAARFY---SEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD---HV--VQNGNSSLLSFTVT---  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY---~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~---~~--~~~~~~~~~~~~v~---  123 (168)
                      .+++|+.|.|+|+++|++||   +++|||++....+....+..++..+.|.+.+..   ..  .......+++|.|+   
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f~v~~~~   98 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASRE   98 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEETTEEEEEEECCGGGSCSCCCTTSSSCCEEEEECSCHH
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCceEecCCeEEEEEEcCCCcccccccccCCCceEEEEECCCHH
Confidence            78999999999999999999   999999998765443334337788988876531   11  11123468999998   


Q ss_pred             CHHHHHHHHHHCCCeEecc-ce-e--eCCeEEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGS-IK-Y--EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~-~~-~--~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++|+++|+.+..+ +. .  +++++.+||+|||||.|||++|
T Consensus        99 dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           99 KVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             HHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            9999999999999998752 32 2  2344799999999999999986

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.82  E-value=3e-19  Score=141.81  Aligned_cols=146  Identities=17%  Similarity=0.170  Sum_probs=105.6

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL   87 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~   87 (168)
                      |+.++.+.+   .+|+|..+++...........   ........+...+++|+.|.|+|++++++|| ++|||++.....
T Consensus       110 ~~~g~~~~~---~DP~G~~iel~~~~~~~~~~~---~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~  182 (323)
T 1f1u_A          110 KGIGDSVRV---EDPLGFPYEFFYETEHVERLT---QRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIK  182 (323)
T ss_dssp             TTBCSEEEE---ECTTSCEEEEECCBCCCCCCT---TCGGGCCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEE
T ss_pred             CCcceEEEE---ECCCCCEEEEEEecccccccc---cccccCCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEE
Confidence            556666544   668899999887765432000   0000013345589999999999999999999 999999887532


Q ss_pred             -----cEEEEE-e--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCC--eEe-ccceeeCCe-EEE
Q 040429           88 -----RWAELQ-S--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGA--ELD-GSIKYEIHG-KVA  152 (168)
Q Consensus        88 -----~~~~~~-~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~--~~~-~~~~~~~~g-~~~  152 (168)
                           .+..|. .  +++.+++...+.     . ..+|++|.|+|+++   .+++|+++|+  ++. +++++..++ .++
T Consensus       183 ~~~g~~~~~f~~~~~~~~~~~~~~~~~-----~-~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~  256 (323)
T 1f1u_A          183 DSDGVTYAAWMHRKQTVHDTALTGGNG-----P-RMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYL  256 (323)
T ss_dssp             CTTCCEEEEEEESSSSSCSEEEEESSB-----S-EEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEE
T ss_pred             cCCCcEEEEEEEcCCCcccEEEeCCCC-----C-CceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEE
Confidence                 133332 2  457788775431     2 45689999999999   8999999999  876 566666655 889


Q ss_pred             EEECCCCCEEEEEe
Q 040429          153 AMRCIDGHMLGLYE  166 (168)
Q Consensus       153 ~~~DPdGn~iel~e  166 (168)
                      ||+|||||.||++.
T Consensus       257 y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          257 YILDPDGHRIEIYT  270 (323)
T ss_dssp             EEECTTCCEEEEEE
T ss_pred             EEECCCCCEEEEEe
Confidence            99999999999975

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=4.8e-20  Score=129.00  Aligned_cols=113  Identities=17%  Similarity=0.240  Sum_probs=84.9

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEE-----Ee----CCCCCcccCCCeEEEEEEeC
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLAL-----MQ----SPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l-----~~----~~~~~~~~~~~~~~~~~~v~  123 (168)
                      ..+++.|+.|.|+|+++|++||+++|||++....+.++.+. .+..+..     ..    .+.......+...+++|.|+
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   83 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFE-TGFAIHEGRSLEETIWRTSSDAQEAYGRRNMLLYFEHA   83 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECSSEEEET-TSCEEEEHHHHHHHHHSCCC--CCCSCCSSCEEEEEES
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcCCcEEEe-ccceeccCchhhhhccccCCccccccCCCceEEEEEeC
Confidence            34689999999999999999999999999987766666654 3333331     01    01111122234567999999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      |+++++++|++ |+++..++...++| +.+||+|||||.|||+++
T Consensus        84 dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  127 (141)
T 2qnt_A           84 DVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGES  127 (141)
T ss_dssp             CHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEEC
T ss_pred             cHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEec
Confidence            99999999999 99987777655566 899999999999999986

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.81  E-value=3.5e-19  Score=130.42  Aligned_cols=116  Identities=17%  Similarity=0.172  Sum_probs=88.2

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec----ccEE--EEEe-------------------CCeEEEEEeCCC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----LRWA--ELQS-------------------GPLKLALMQSPS  106 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~~~~--~~~~-------------------~~~~i~l~~~~~  106 (168)
                      +...+++|+.|.|+|+++|++||+++|||++....    ..+.  .+..                   ++..|.|.+...
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            33479999999999999999999999999988652    1333  2332                   246788865432


Q ss_pred             CC-c---------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          107 DH-V---------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       107 ~~-~---------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .. .         .......|++|.|+|+++++++|+++|+.+..++....+++.+||+|||||.|||+++
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~  177 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNP  177 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEec
Confidence            10 0         0113456899999999999999999999987666555556789999999999999985

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.81  E-value=2.3e-19  Score=128.24  Aligned_cols=116  Identities=18%  Similarity=0.259  Sum_probs=90.4

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--------------------ccEEEEEeCCeEEEEEeCCCCCcc
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--------------------LRWAELQSGPLKLALMQSPSDHVV  110 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--------------------~~~~~~~~~~~~i~l~~~~~~~~~  110 (168)
                      .+...+++|+.|.|+|+++|++||+++|||++....                    ...+.+..++..|.|.+.......
T Consensus        14 ~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~   93 (159)
T 3gm5_A           14 ILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPST   93 (159)
T ss_dssp             CCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCH
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCCh
Confidence            333479999999999999999999999999876421                    124555668888888875432211


Q ss_pred             -------cCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCC--CCEEEEEee
Q 040429          111 -------QNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCID--GHMLGLYEP  167 (168)
Q Consensus       111 -------~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPd--Gn~iel~e~  167 (168)
                             ...+..|++|.|+|+++.+++|+++|+.+..++.. .+++++||.|||  ||.|||+|+
T Consensus        94 ~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           94 WREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             hHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-CCeeEEEEeccccCcEEEEEEec
Confidence                   12345689999999999999999999998655433 356999999999  999999996

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.81  E-value=5.3e-19  Score=125.20  Aligned_cols=111  Identities=12%  Similarity=0.124  Sum_probs=81.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEe--cccEEEEEe-CCeEEEEEeCC-------C-CCcccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVC--TLRWAELQS-GPLKLALMQSP-------S-DHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~--~~~~~~~~~-~~~~i~l~~~~-------~-~~~~~~~~~~~~~~~v~  123 (168)
                      .||.||.|.|+|+++|++||++ ||+.....  .+....+.. ++..+.+....       . ......+...|++|.+.
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~   86 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCVSAI   86 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEECS
T ss_pred             ccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEEEec
Confidence            6899999999999999999998 66665543  234444433 44444444321       0 11122334457999984


Q ss_pred             ---CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          124 ---DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       124 ---dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                         ++++++++++++|+.+..++...++++.+||+|||||+|||+.
T Consensus        87 ~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           87 DRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             SHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEE
T ss_pred             cHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEE
Confidence               5788899999999999888877777899999999999999974

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.80  E-value=4.4e-19  Score=125.58  Aligned_cols=111  Identities=14%  Similarity=0.224  Sum_probs=79.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEE---ecccEEEEEeCCeEEEEE-eCCCCCccc-CCCeEEE--------EE-
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNV---CTLRWAELQSGPLKLALM-QSPSDHVVQ-NGNSSLL--------SF-  120 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~---~~~~~~~~~~~~~~i~l~-~~~~~~~~~-~~~~~~~--------~~-  120 (168)
                      .++.|+.|.|+|+++|++||+++|||++..   ..+.+..+   +..|+|. ..+...... .+....+        +| 
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   96 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDY---GCVFDYPSEVAVAHLTPFRGFHLFKGEPIKGVAGFM   96 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEE---EEEESSCTTTTSCC--CCCSEEEEESCCCSSEEEEE
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCCccEE---ccEEEEeccCCCcccccccccceeeccCCCccEEEE
Confidence            689999999999999999999999999953   23444444   2234441 111111110 0111122        55 


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          121 TVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       121 ~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      .++|+++++++|+++|+.+..++...++| +.+||+|||||.|||+++.
T Consensus        97 ~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           97 MIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             EEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            99999999999999999987777655556 8899999999999999873

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.80  E-value=5.8e-18  Score=135.08  Aligned_cols=147  Identities=12%  Similarity=0.012  Sum_probs=102.6

Q ss_pred             eeecCcceeeecchhcccccc-chhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--
Q 040429           19 LHSLSGSLVKSSARLSKVHKR-DEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--   95 (168)
Q Consensus        19 ~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--   95 (168)
                      +.||+|..+++.......... ........+ ..|...+++|+.|.|+|+++|++||+++|||++....+.++.|..+  
T Consensus       143 f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~-~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~  221 (338)
T 1zsw_A          143 FEDAEGLRLVLLVSNGEKVEHWETWEKSEVP-AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKG  221 (338)
T ss_dssp             EECTTCCEEEEEECTTCCCTTCCCCTTCSSC-GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSSEEEEESSTT
T ss_pred             EECCCCCEEEEEEcCCccccccCcCcCCCCC-ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecCCeEEEEecCC
Confidence            478999999988765431110 000001111 3455589999999999999999999999999998876667777662  


Q ss_pred             Ce--EEEEEeCCCC-CcccCCCeEEEEEEeC---CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429           96 PL--KLALMQSPSD-HVVQNGNSSLLSFTVT---DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus        96 ~~--~i~l~~~~~~-~~~~~~~~~~~~~~v~---dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +.  .+........ .....+...|++|.|+   |+++++++|+++|+.+. ++...++++.+||+|||||.|||++.
T Consensus       222 g~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          222 EAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             CSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             CCceEEEEeccCCCCCCCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecCceEEEEEECCCCCEEEEEEc
Confidence            22  3333332111 1112344568999998   79999999999999985 44444556899999999999999974

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.79  E-value=1.7e-18  Score=136.32  Aligned_cols=152  Identities=14%  Similarity=0.114  Sum_probs=102.3

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchh---hhcccccc-ccccccccEEEEEeCCHHHHHHHHHhccCCEEE
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEV---RERERERR-VMAAASFRWILQLHKDVPKAARFYSEGLDFTVN   83 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~-~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~   83 (168)
                      +..++.+.+   .+|+|..+++.............   ........ .+...+|+|+.|.|+|+++|++||+++|||++.
T Consensus       102 ~~~~~~~~f---~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~  178 (309)
T 3hpy_A          102 LETGERVRF---ELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLV  178 (309)
T ss_dssp             TTBCCEEEE---ECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEE
T ss_pred             CCCeeEEEE---ECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEE
Confidence            444555544   56888888888765433210000   00000011 355589999999999999999999999999987


Q ss_pred             Eecc------cEEEE-Ee--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCCeEec-cceeeCCe-
Q 040429           84 VCTL------RWAEL-QS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGAELDG-SIKYEIHG-  149 (168)
Q Consensus        84 ~~~~------~~~~~-~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~~~~~-~~~~~~~g-  149 (168)
                      ....      ....+ ..  ..+.+++...+.     .+...|++|.|+|+++   .+++|+++|+++.. +.++..++ 
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~  253 (309)
T 3hpy_A          179 ERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPE-----KGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRG  253 (309)
T ss_dssp             EEEECSSSCSEEEEEEESSSSSCSEEEEECSS-----TTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSE
T ss_pred             EEEecCCCCceEEEEEecCCCceeEEEecCCC-----CCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCcc
Confidence            6521      12222 22  346677766432     3446789999988776   46799999999764 44455544 


Q ss_pred             EEEEEECCCCCEEEEEee
Q 040429          150 KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       150 ~~~~~~DPdGn~iel~e~  167 (168)
                      +++||+|||||+|||+..
T Consensus       254 ~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          254 CTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEEEECTTSCEEEEEEE
T ss_pred             EEEEEECCCCCEEEEEeC
Confidence            889999999999999853

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.79  E-value=2.4e-18  Score=135.16  Aligned_cols=152  Identities=21%  Similarity=0.272  Sum_probs=101.6

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhcccccc--chh--hhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEE
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKR--DEV--RERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVN   83 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~--~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~   83 (168)
                      |+.++.+.+   .+|+|..+++....+.....  ...  .....+...|...+++|+.|.|+|+++|++||+++|||++.
T Consensus       101 ~~~~~~~~~---~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~  177 (307)
T 1mpy_A          101 NSCGRRVRF---QAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA  177 (307)
T ss_dssp             TTBCCEEEE---ECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCceEEEEE---ECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeE
Confidence            445566544   66888888888755432210  000  00011123456689999999999999999999999999987


Q ss_pred             Eecc-----cEEEE-Ee--CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHHHHHHHCCCeEeccc-eeeC-CeE
Q 040429           84 VCTL-----RWAEL-QS--GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAVTKLMALGAELDGSI-KYEI-HGK  150 (168)
Q Consensus        84 ~~~~-----~~~~~-~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~~~l~~~G~~~~~~~-~~~~-~g~  150 (168)
                      ....     ..+.+ ..  .++.+.+...+     ..+...|++|.|+   |+++++++|+++|+++..++ +++. .++
T Consensus       178 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~  252 (307)
T 1mpy_A          178 EQVLDENGTRVAQFLSLSTKAHDVAFIHHP-----EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGK  252 (307)
T ss_dssp             EEEECTTCCEEEEEEESSSBSCSEEEEECS-----SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCE
T ss_pred             eeeecCCCcEEEEEEEcCCCceeEEEecCC-----CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCce
Confidence            6521     22222 22  24456655432     2343568999998   56666789999999976444 3443 358


Q ss_pred             EEEEECCCCCEEEEEee
Q 040429          151 VAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       151 ~~~~~DPdGn~iel~e~  167 (168)
                      .+||+|||||.|||+++
T Consensus       253 ~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          253 TIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEEECTTSCEEEEEEC
T ss_pred             EEEEECCCCcEEEEEec
Confidence            89999999999999985

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.77  E-value=2.6e-17  Score=131.72  Aligned_cols=144  Identities=9%  Similarity=-0.046  Sum_probs=103.2

Q ss_pred             eecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--Ce
Q 040429           20 HSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PL   97 (168)
Q Consensus        20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~   97 (168)
                      .||+|..+|+..+.+.....-  ..... +..+...+|+|+.|.|+|++++.+||+++|||++....+.+..+..+  ++
T Consensus       120 ~DPdGn~iEl~~~~~~~~~~~--~~~~v-~~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~~~~~~~~g~~~~  196 (335)
T 3oaj_A          120 DDPHGLHLEIVEREEGEANTW--TFGEV-TPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGDIG  196 (335)
T ss_dssp             ECTTSCEEEEEECSCSCCCCC--CBTTB-CTTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEETTEEEEECSSSSS
T ss_pred             ECCCCCEEEEEEeCCCCcCCC--cCCCC-ChhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccCCEEEEEeCCCCc
Confidence            678899999887654211100  00111 12334478999999999999999999999999999876666666653  46


Q ss_pred             EEEEEeCCCCC--cccCCCeEEEEEEeCC---HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429           98 KLALMQSPSDH--VVQNGNSSLLSFTVTD---INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus        98 ~i~l~~~~~~~--~~~~~~~~~~~~~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .+.+...+...  .+..+...|++|.|+|   ++++.++|+++|+.+.+... ..+...+||+|||||+|||+..
T Consensus       197 ~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~~-r~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          197 NVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRD-RNYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             CEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEE-CSSSEEEEEECTTSCEEEEEES
T ss_pred             EEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCcccccc-CCcEEEEEEECCCCcEEEEEeC
Confidence            77777654322  2234456789999988   55678899999998654332 2345789999999999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.77  E-value=1.3e-17  Score=130.25  Aligned_cols=113  Identities=14%  Similarity=0.174  Sum_probs=88.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEEEeCCeEE-EEEeCCCCCcccCCCeEEEEEEeCCHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAELQSGPLKL-ALMQSPSDHVVQNGNSSLLSFTVTDINSA  128 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~~~~~~i-~l~~~~~~~~~~~~~~~~~~~~v~dl~~~  128 (168)
                      .++.|+.|.|+|+++|++||+++|||++.....     .+..+..++..+ .+...+.......+...+++|.|+|++++
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~v~d~d~~  110 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGAPEGMPPIWNTYIAVDDVDAV  110 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEECCSCC---CCCEEEEEEECSCHHHH
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeeccCCCCCCCCCCCcEEEEEEeCCHHHH
Confidence            379999999999999999999999999887643     577777766544 34443322211233445799999999999


Q ss_pred             HHHHHHCCCeEeccceee-CCeEEEEEECCCCCEEEEEee
Q 040429          129 VTKLMALGAELDGSIKYE-IHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       129 ~~~l~~~G~~~~~~~~~~-~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++|+++|+++..++... ..|++++|+||+||.|||+++
T Consensus       111 ~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~  150 (282)
T 3oxh_A          111 VDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQA  150 (282)
T ss_dssp             HTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEc
Confidence            999999999987666544 467999999999999999986

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.76  E-value=1.2e-17  Score=116.74  Aligned_cols=111  Identities=19%  Similarity=0.135  Sum_probs=80.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec---cc--EEEEEeC--CeEEEEEeCCCCC-cccCCCeEEEEEEeCCH-
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT---LR--WAELQSG--PLKLALMQSPSDH-VVQNGNSSLLSFTVTDI-  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~~--~~~~~~~--~~~i~l~~~~~~~-~~~~~~~~~~~~~v~dl-  125 (168)
                      ..+.|+.|.|+|+++|++||+++|||++....   ..  .+.+..+  ++.+.+...+... ........|++|.|+|+ 
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d~~   89 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAV   89 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHH
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEeCCcc
Confidence            56788899999999999999999999987653   22  3334433  3556666543321 11122345899999999 


Q ss_pred             --HHHHHHHHHCCCeEec--cceeeCCeEEEEEECCCCCEEEEEee
Q 040429          126 --NSAVTKLMALGAELDG--SIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 --~~~~~~l~~~G~~~~~--~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                        ++++++|+++|+.+..  .+.....|.  ||+|||||.|||+++
T Consensus        90 ~l~~~~~~l~~~G~~~~~~~~~~~~~~g~--~~~DPdG~~iel~~~  133 (139)
T 1twu_A           90 ELAAITSKLKHMGYQEVESENPYWSNGGV--TIEDPDGWRIVFMNS  133 (139)
T ss_dssp             HHHHHHHHHHHTTCCEECCSSHHHHSSEE--EEECTTCCEEEEESS
T ss_pred             hHHHHHHHHHHcCCcCcCCCCcccCCCCe--EEECCCCCEEEEEEc
Confidence              9999999999999873  233333453  799999999999986

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.76  E-value=1.5e-17  Score=129.98  Aligned_cols=142  Identities=12%  Similarity=0.031  Sum_probs=94.9

Q ss_pred             eeecCcceeeecchhccc-cccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----c---cE
Q 040429           19 LHSLSGSLVKSSARLSKV-HKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----L---RW   89 (168)
Q Consensus        19 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~---~~   89 (168)
                      +.+|+|..+++....... .......... ..-.....+++|+.|.|+|+++|++||+++|||++....     +   ..
T Consensus       105 ~~DPdG~~iel~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~  183 (297)
T 1lgt_A          105 FADPFGLPLEIYYGASEVFEKPFLPGAAV-SGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVP  183 (297)
T ss_dssp             EECTTSCEEEEEECCCBCTTSCCCCSSSC-SCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEE
T ss_pred             EECCCCCEEEEEECccccccCCccCCCcc-cccccCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccce
Confidence            366888888887654332 1100000000 000022368999999999999999999999999987541     1   12


Q ss_pred             EEE-Ee--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHH---HHHHHCCCeEeccce-eeCCe-EEEEEECCCCCE
Q 040429           90 AEL-QS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAV---TKLMALGAELDGSIK-YEIHG-KVAAMRCIDGHM  161 (168)
Q Consensus        90 ~~~-~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~---~~l~~~G~~~~~~~~-~~~~g-~~~~~~DPdGn~  161 (168)
                      ..+ ..  +++.+.+...+.     .+...|++|.|+|++++.   ++ +++|+++..++. ++.+. +++||+|||||.
T Consensus       184 ~~~~~~~~~~~~l~l~~~~~-----~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~  257 (297)
T 1lgt_A          184 AYFLHCNERHHTLAIAAFPL-----PKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVE  257 (297)
T ss_dssp             EEEEESSSBSCSEEEECCCC-----SSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCE
T ss_pred             EEEEEeCCCcceEEEEcCCC-----CCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcE
Confidence            233 22  245677765431     344568999999988877   88 999999876554 43333 679999999999


Q ss_pred             EEEEee
Q 040429          162 LGLYEP  167 (168)
Q Consensus       162 iel~e~  167 (168)
                      |||++.
T Consensus       258 iel~~~  263 (297)
T 1lgt_A          258 VEYGWS  263 (297)
T ss_dssp             EEEEEC
T ss_pred             EEEecC
Confidence            999875

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.76  E-value=1.1e-17  Score=135.45  Aligned_cols=146  Identities=16%  Similarity=0.173  Sum_probs=105.2

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL   87 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~   87 (168)
                      |..++.+.  + .+|+|..+|++.+.........   ...+.......++.|++|.|+|++++.+||++ |||++++...
T Consensus       110 ~~~g~~~~--f-~DPdG~~iEl~~~~~~~~~~~~---~~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~  182 (365)
T 4ghg_A          110 KGIGDALR--V-EDPLGFPYEFFFETTHVERLHM---RYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQ  182 (365)
T ss_dssp             TTBCSEEE--E-ECTTSCEEEEECCBCCCCCCTT---CTTTCCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEE
T ss_pred             CCCceEEE--E-ECCCCCEEEEEEEeeccccccc---cccccccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEe
Confidence            34455554  4 6688999998887665543221   11122333347899999999999999999987 9999887621


Q ss_pred             -----c---EEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHH---HHHHCCCe--E-eccceeeCCe-EEE
Q 040429           88 -----R---WAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVT---KLMALGAE--L-DGSIKYEIHG-KVA  152 (168)
Q Consensus        88 -----~---~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~---~l~~~G~~--~-~~~~~~~~~g-~~~  152 (168)
                           .   |..+...+|++++...+.      +..+|++|.|+|++++.+   +|+++|+.  + .++.+|+.+. .++
T Consensus       183 ~~~g~~~~~f~~~~~~hH~la~~~~~~------~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~  256 (365)
T 4ghg_A          183 DDEGTTYAAWMHRKGTVHDTALTGGNG------PRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYL  256 (365)
T ss_dssp             CTTSCEEEEEEESSSSSCSEEEEESSB------SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEE
T ss_pred             cCCCceeEEeeecCCcccceeeecCCC------CceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEE
Confidence                 1   333334688999887653      346789999999888755   67788874  2 3777887765 899


Q ss_pred             EEECCCCCEEEEEe
Q 040429          153 AMRCIDGHMLGLYE  166 (168)
Q Consensus       153 ~~~DPdGn~iel~e  166 (168)
                      ||+||+||+||++.
T Consensus       257 Y~~dP~G~~iE~~t  270 (365)
T 4ghg_A          257 YILDPDNHRIEIYT  270 (365)
T ss_dssp             EEECTTCCEEEEEE
T ss_pred             EEECCCCceEEEEc
Confidence            99999999999975

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.75  E-value=2.5e-17  Score=128.50  Aligned_cols=142  Identities=14%  Similarity=0.057  Sum_probs=94.7

Q ss_pred             eeecCcceeeecchhccc-cccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--------cE
Q 040429           19 LHSLSGSLVKSSARLSKV-HKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--------RW   89 (168)
Q Consensus        19 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--------~~   89 (168)
                      +.+|+|..+++....... ...... ....+...+...+++|+.|.|+|+++|++||+++|||++.....        ..
T Consensus       105 ~~DPdG~~iel~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~  183 (292)
T 1kw3_B          105 LQDPFGLPLEIYYGPAEIFHEPFLP-SAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVP  183 (292)
T ss_dssp             EECTTSCEEEEEECCCBCTTSCCCC-SSSCCCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEE
T ss_pred             EECCCCCEEEEEECccccccCCCCC-CCCccccccCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccce
Confidence            366889998887655432 110000 00000011445789999999999999999999999999875421        12


Q ss_pred             EE-EEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCCeEeccc-eeeCCe-EEEEEECCCCC-
Q 040429           90 AE-LQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGAELDGSI-KYEIHG-KVAAMRCIDGH-  160 (168)
Q Consensus        90 ~~-~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn-  160 (168)
                      .. +..  +++.+++...+.     .+...|++|.|+|+++   .+++|+ +|+++..++ +++.++ +++||+||||| 
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~-----~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~  257 (292)
T 1kw3_B          184 AHFLHCNGRHHTIALAAFPI-----PKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMI  257 (292)
T ss_dssp             EEEEESSSBSCSEEEECCSC-----SSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTC
T ss_pred             EEEEEECCCcceEEEecCCC-----CCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCe
Confidence            22 232  345677664332     2445689999998776   556888 999877554 455443 78899999999 


Q ss_pred             EEEEEee
Q 040429          161 MLGLYEP  167 (168)
Q Consensus       161 ~iel~e~  167 (168)
                      .|||++.
T Consensus       258 ~iEl~~~  264 (292)
T 1kw3_B          258 EVEFGWG  264 (292)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEEC
Confidence            9999874

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.74  E-value=6.8e-17  Score=126.48  Aligned_cols=141  Identities=13%  Similarity=0.158  Sum_probs=95.1

Q ss_pred             eeecCcceeeecch-hccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--------
Q 040429           19 LHSLSGSLVKSSAR-LSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--------   87 (168)
Q Consensus        19 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--------   87 (168)
                      +.||+|..+++... -.......  ... ...-.....+++|+.|.|+|+++|++||+++|||++....  +        
T Consensus       107 ~~DPdG~~iel~~~~~~~~~~~~--~~~-~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~  183 (300)
T 2zyq_A          107 FADPSGNCLEVFHGTALEHRRVV--SPY-GHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPA  183 (300)
T ss_dssp             EECTTCCEEEEEECCCCCCSCCC--CTT-CCCBCCGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCT
T ss_pred             EECCCCCEEEEEEcCCcCCCCCc--cCC-CcccccCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCC
Confidence            36788888888765 21111000  000 0000022368999999999999999999999999987531  1        


Q ss_pred             ----cEEEE-EeC--CeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHH---HHHHHHCCCeEeccc-eeeCC-eEEEEEE
Q 040429           88 ----RWAEL-QSG--PLKLALMQSPSDHVVQNGNSSLLSFTVTDINSA---VTKLMALGAELDGSI-KYEIH-GKVAAMR  155 (168)
Q Consensus        88 ----~~~~~-~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~---~~~l~~~G~~~~~~~-~~~~~-g~~~~~~  155 (168)
                          ....+ ..+  ++.+++...+.     .....|++|.|+|++++   +++|+++|+++..++ +++.+ ++++||+
T Consensus       184 ~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~  258 (300)
T 2zyq_A          184 DGPPAWLRFFGCNPRHHSLAFLPMPT-----SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMK  258 (300)
T ss_dssp             TSCCEEEEEEESSSBSCSEEEESSCC-----SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEE
T ss_pred             CCCceEEEEEEECCCccEEEEecCCC-----CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEE
Confidence                13333 332  45677765431     23456899999997664   899999999987544 45444 4899999


Q ss_pred             CCCCCEEEEEee
Q 040429          156 CIDGHMLGLYEP  167 (168)
Q Consensus       156 DPdGn~iel~e~  167 (168)
                      |||||+|||++.
T Consensus       259 DPdG~~iEl~~~  270 (300)
T 2zyq_A          259 TPGGFDIEFGCE  270 (300)
T ss_dssp             CTTSSEEEEEEC
T ss_pred             CCCCCEEEEEeC
Confidence            999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.74  E-value=1.7e-16  Score=126.65  Aligned_cols=132  Identities=11%  Similarity=0.059  Sum_probs=96.5

Q ss_pred             EeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--cEEEEEeC
Q 040429           18 VLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--RWAELQSG   95 (168)
Q Consensus        18 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~~~~~~~~   95 (168)
                      ++.||+|..+++......           .+      ..+.|+.|.|+|+++|++||+++|||++.....  .++.+..+
T Consensus       138 ~~~DPdG~~iel~~~~~~-----------~~------~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~l~~g  200 (330)
T 3zi1_A          138 ETEAPGGYKFYLQNRSLP-----------QS------DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQRALLGYA  200 (330)
T ss_dssp             EEECTTSCEEEEESSCCT-----------TS------CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTTEEEEESS
T ss_pred             EEECCCCCEEEEEecCCC-----------CC------CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCcEEEEEeC
Confidence            347899999998664320           11      468899999999999999999999999988643  34555553


Q ss_pred             --CeEEEEEeCCCCCcccCCCeEEEEEEe--CCHHHHHHHHHHCCCeEecccee-----eCCeEEEEEECCCCCEEEEEe
Q 040429           96 --PLKLALMQSPSDHVVQNGNSSLLSFTV--TDINSAVTKLMALGAELDGSIKY-----EIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus        96 --~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl~~~~~~l~~~G~~~~~~~~~-----~~~g~~~~~~DPdGn~iel~e  166 (168)
                        .+.+.+......... .....+++|.|  +|+++++++|+++|+++..++..     ..+++.+||+|||||.|||++
T Consensus       201 ~~~~~l~l~~~~~~~~~-~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~  279 (330)
T 3zi1_A          201 DNQCKLELQGVKGGVDH-AAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVG  279 (330)
T ss_dssp             TTSCEEEEEECSSCCCC-BTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEE
T ss_pred             CceEEEEECCCCCCCCC-CCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEE
Confidence              456666554322111 22234689988  48999999999999997665543     224489999999999999997


Q ss_pred             e
Q 040429          167 P  167 (168)
Q Consensus       167 ~  167 (168)
                      .
T Consensus       280 ~  280 (330)
T 3zi1_A          280 D  280 (330)
T ss_dssp             H
T ss_pred             e
Confidence            4

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.73  E-value=1.2e-16  Score=127.92  Aligned_cols=114  Identities=11%  Similarity=0.121  Sum_probs=88.8

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cE-EEEEeC----CeEEEEEeCCCCCc--ccCCCeEEE
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RW-AELQSG----PLKLALMQSPSDHV--VQNGNSSLL  118 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~-~~~~~~----~~~i~l~~~~~~~~--~~~~~~~~~  118 (168)
                      |+..+|+||.|.|+|++++++||+++|||++.....      .+ ..+...    +..|.+...+....  ...+...++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            345789999999999999999999999999987631      23 334332    57888877654321  223345689


Q ss_pred             EEEeC--CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          119 SFTVT--DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       119 ~~~v~--dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +|.|+  |+++++++|+++|+.+..  ....+++.+||+|||||.|||++.
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g~~~~~f~DPdGn~iEl~~~  132 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQYVEFDDPHGLHLEIVER  132 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EEETTEEEEEEECTTSCEEEEEEC
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--eccCCcEEEEEECCCCCEEEEEEe
Confidence            99998  999999999999998764  444556899999999999999975

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.73  E-value=1.6e-16  Score=126.69  Aligned_cols=116  Identities=10%  Similarity=0.072  Sum_probs=86.7

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec----c--cE-EEEEeC----CeEEEEEeCCCCC--cccCCCeEE
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----L--RW-AELQSG----PLKLALMQSPSDH--VVQNGNSSL  117 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~--~~-~~~~~~----~~~i~l~~~~~~~--~~~~~~~~~  117 (168)
                      ||...+++|+.|.|+|+++|++||+++|||++....    .  .+ ..+..+    +..+.+...+...  ....+...+
T Consensus        25 m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~h  104 (338)
T 1zsw_A           25 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITR  104 (338)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEE
T ss_pred             cCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeee
Confidence            334578999999999999999999999999987653    1  12 223332    4567766654321  112234568


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          118 LSFTVT---DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       118 ~~~~v~---dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|.|+   |+++++++|+++|+.+..++. .++.+.+||+|||||.|||+++
T Consensus       105 iaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~G~~~~~f~DPdG~~iel~~~  156 (338)
T 1zsw_A          105 IGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YANRPALQFEDAEGLRLVLLVS  156 (338)
T ss_dssp             EEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETTEEEEEEECTTCCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCccccccc-cCCcEEEEEECCCCCEEEEEEc
Confidence            999998   799999999999999876554 3444899999999999999985

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.72  E-value=9e-17  Score=126.25  Aligned_cols=142  Identities=16%  Similarity=0.027  Sum_probs=92.1

Q ss_pred             eeecCcceeeecch-hccccccchhhhccccc-cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----c----
Q 040429           19 LHSLSGSLVKSSAR-LSKVHKRDEVRERERER-RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----L----   87 (168)
Q Consensus        19 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~-~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~----   87 (168)
                      +.+|+|..+++... .......... ....+. -.....+++|+.|.|+|+++|++|| ++|||++....     +    
T Consensus       108 ~~DPdG~~iel~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~  185 (305)
T 2wl9_A          108 LHDPGGNPTEIFYGPQVDTSSPFHP-GRPMFGKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVG  185 (305)
T ss_dssp             EECTTCCEEEEEEEECBCTTSCCCC-SSCCSSCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEE
T ss_pred             EECCCCCEEEEEECCCccCCCCcCC-CCCcccceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccc
Confidence            47789999998765 2111000000 000000 0022368999999999999999999 99999987531     1    


Q ss_pred             cEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHHHHHHHCCCeEeccc-eeeCCe-EEEEEECCCCC
Q 040429           88 RWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAVTKLMALGAELDGSI-KYEIHG-KVAAMRCIDGH  160 (168)
Q Consensus        88 ~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn  160 (168)
                      ....+..  .++.+++...+.     .+...|++|.|+|   +++.+++|+++|+++..++ ++..++ +++||+|||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~  260 (305)
T 2wl9_A          186 TPVFMHCNDRHHSLAFGVGPM-----DKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGW  260 (305)
T ss_dssp             CCEEEESSSSSCSEEECCSCC-----SSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSS
T ss_pred             eEEEEEcCCCceEEEEecCCC-----CCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCC
Confidence            1222222  345566543321     2345689999998   5567789999999987544 444443 78999999999


Q ss_pred             EEEEEee
Q 040429          161 MLGLYEP  167 (168)
Q Consensus       161 ~iel~e~  167 (168)
                      .|||+..
T Consensus       261 ~iEl~~~  267 (305)
T 2wl9_A          261 LWEPGWG  267 (305)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            9999874

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.72  E-value=5.7e-17  Score=127.57  Aligned_cols=110  Identities=13%  Similarity=0.124  Sum_probs=85.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-cEEEEEe-C---CeEEEEEeCCCCCcccCCCeEEEEEEeCC--
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-RWAELQS-G---PLKLALMQSPSDHVVQNGNSSLLSFTVTD--  124 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-~~~~~~~-~---~~~i~l~~~~~~~~~~~~~~~~~~~~v~d--  124 (168)
                      |...+++|+.|.|+|+++|++||+++|||++....+ ....+.. +   ++.+.+...+.      ....+++|.|+|  
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~------~~~~h~a~~v~~~~   77 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKCWDERDHSCYIIREADT------AGIDFFGFKVLDKA   77 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTTSCEEEECTTCCBSCSEEEEECSS------CEEEEEEEEESCHH
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCCCeEEEEeccCCCceEEEEEeCCC------CceeEEEEEECCHH
Confidence            445789999999999999999999999999988753 5555553 2   25666665432      234679999986  


Q ss_pred             -HHHHHHHHHHCCCeEeccce--eeCCeEEEEEECCCCCEEEEEee
Q 040429          125 -INSAVTKLMALGAELDGSIK--YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 -l~~~~~~l~~~G~~~~~~~~--~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                       +++++++|+++|+++...+.  ....++.+||+|||||.|||+++
T Consensus        78 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (309)
T 3hpy_A           78 TLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAE  123 (309)
T ss_dssp             HHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEc
Confidence             99999999999998764433  23445899999999999999874

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.71  E-value=7e-17  Score=126.88  Aligned_cols=110  Identities=6%  Similarity=0.055  Sum_probs=86.5

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEE-ecccEEEEEeCC--eEEEEEeCCCCCcccCCCeEEEEEEeC---CH
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNV-CTLRWAELQSGP--LKLALMQSPSDHVVQNGNSSLLSFTVT---DI  125 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~-~~~~~~~~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl  125 (168)
                      |...+++|+.|.|+|+++|++||+++|||++.. ..+....+..++  +.+.+...+      .....+++|.|+   |+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~f~v~~~~dl   75 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRIYLRMDRWHHRIVLHADG------SDDLAYIGWRVAGPVEL   75 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSCTTEEEEECSSBSCSEEEECSS------CCEEEEEEEECSSHHHH
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccCCCeEEEEeCCCeEEEEEEECC------CCCeEEEEEEECCHHHH
Confidence            555789999999999999999999999999987 555555565554  677776533      223457999996   69


Q ss_pred             HHHHHHHHHCCCeEecccee----eCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKY----EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+.+..++..    ...++.+||+|||||.|||++.
T Consensus        76 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           76 DELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             HHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99999999999997644331    2334889999999999999875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.71  E-value=1.6e-16  Score=122.69  Aligned_cols=108  Identities=10%  Similarity=0.081  Sum_probs=88.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe--CCHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV--TDINSAVTKL  132 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl~~~~~~l  132 (168)
                      .+++|+.|.|+|++++++||+++|||++....+.++.+..++..+.|...+..    .....+++|.+  +++++++++|
T Consensus        25 ~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~~~~~L~~g~~~l~l~~~~~~----~~~~~hiaf~V~~~dld~~~~rL  100 (252)
T 3pkv_A           25 TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADAFTIQLGVSQIQFRAAADG----TKPFYHIAINIAANHFQEGKAWL  100 (252)
T ss_dssp             CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECSSEEEEEETTEEEEEEECCTT----CCCCCEEEEEECTTCHHHHHHHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccCCEEEEEeCCEEEEEEECCCC----CCCeeEEEEEecHHHHHHHHHHH
Confidence            68999999999999999999999999999888788888888899998876532    11244688877  4699999999


Q ss_pred             HHCCCeEecc-ce-----eeCCeEEEEEECCCCCEEEEEee
Q 040429          133 MALGAELDGS-IK-----YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       133 ~~~G~~~~~~-~~-----~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++ +++..+ +.     ..++++.+||+|||||.+||++.
T Consensus       101 ~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~  140 (252)
T 3pkv_A          101 SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISR  140 (252)
T ss_dssp             TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred             Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEe
Confidence            999 887552 21     23445899999999999999975

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.71  E-value=4.3e-16  Score=121.13  Aligned_cols=110  Identities=18%  Similarity=0.182  Sum_probs=83.9

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEe-cc--cEEEEEeCC----eEEEEEeCCCCCcccCCCeEEEEEEeC-CHHH
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVC-TL--RWAELQSGP----LKLALMQSPSDHVVQNGNSSLLSFTVT-DINS  127 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~-~~--~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~v~-dl~~  127 (168)
                      ...++.|.|+|+++|++||+++|||++... .+  .+..+..++    ..+.+...+..   ..+...+++|.++ |+++
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~dvd~  259 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGP---GPVEPVRLHLDAAGTADS  259 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETTEEEEEEESSSSSSSSEEEEEECCCS---SCCCCCEEEEEEESCHHH
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCCccEEEEEcCCCccccccccccCCCc---CCCCceEEEEEcCccHHH
Confidence            345778999999999999999999998843 32  466666655    44444332321   1122346889998 9999


Q ss_pred             HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          128 AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      ++++++++|+++..++...++| +.++|+|||||.|+|++|.
T Consensus       260 ~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~~  301 (301)
T 2zw5_A          260 LHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAPV  301 (301)
T ss_dssp             HHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCCC
Confidence            9999999999988777766655 9999999999999999974

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.70  E-value=2.8e-16  Score=124.09  Aligned_cols=110  Identities=12%  Similarity=0.109  Sum_probs=89.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC----eEEEEEeCCCCCcccCCCeEEEEEEe---CC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP----LKLALMQSPSDHVVQNGNSSLLSFTV---TD  124 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~v---~d  124 (168)
                      |...+++|+.|.|+|++++++||+++|||++....+..+.+..++    ..+.|.+.+.      ....+++|.|   +|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~------~~~~~~~~~v~~~~d   77 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADE------NRIDVIALAADSRSD   77 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECSSEEEEECTTSCCSCSEEEEECSS------CEEEEEEEEESSHHH
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecCCeEEEEECCCCCCEEEEEEECCC------CCeeEEEEEeCCHHH
Confidence            344789999999999999999999999999988777777777654    7777776431      2245688988   88


Q ss_pred             HHHHHHHHHHCCCeEecccee---eCCeEEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIKY---EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+++..++..   ..+++.++|.||+||.|||+++
T Consensus        78 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  123 (310)
T 3b59_A           78 VDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSD  123 (310)
T ss_dssp             HHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEc
Confidence            999999999999998766653   3345889999999999999975

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.70  E-value=9.7e-16  Score=107.31  Aligned_cols=111  Identities=14%  Similarity=0.012  Sum_probs=83.7

Q ss_pred             cccEEEEEeC--CHHHHHHHHHhcc-CCEEEEe---c-------c--cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEE
Q 040429           56 SFRWILQLHK--DVPKAARFYSEGL-DFTVNVC---T-------L--RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSF  120 (168)
Q Consensus        56 ~i~hv~l~v~--D~~~a~~FY~~vL-Gf~~~~~---~-------~--~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~  120 (168)
                      ++. ..|.+.  |+++|++||+++| |+++...   .       .  .++.+..++..+.+...........+....++|
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~   84 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFV   84 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSCCCCTTEEEEE
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCCCCCCCceEEEE
Confidence            454 567876  9999999999999 9998752   1       1  266677788777665432111111123346899


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          121 TVTD---INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       121 ~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                      .|+|   +++++++|. +|+++..++...++| ++.+|+||+||.|+|..+.
T Consensus        85 ~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           85 DCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             ECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEecC
Confidence            9999   999999999 999998888866666 8999999999999998763

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.69  E-value=3.5e-16  Score=113.32  Aligned_cols=111  Identities=15%  Similarity=0.061  Sum_probs=82.0

Q ss_pred             cccEEEEEeCC--HHHHHHHHHhccCCEEEEec-----------c--cEEEEEeCCeEEEEEeC-CCCCccc-C--CCeE
Q 040429           56 SFRWILQLHKD--VPKAARFYSEGLDFTVNVCT-----------L--RWAELQSGPLKLALMQS-PSDHVVQ-N--GNSS  116 (168)
Q Consensus        56 ~i~hv~l~v~D--~~~a~~FY~~vLGf~~~~~~-----------~--~~~~~~~~~~~i~l~~~-~~~~~~~-~--~~~~  116 (168)
                      +-.+..|.|+|  +++|++||+++|||++....           .  .++.+..++..|.+... +....+. .  +...
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~~~~~~~g~  103 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGV  103 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCC
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCccccCCCCcE
Confidence            34577899999  99999999999999987432           1  35667777777776643 1101111 1  2234


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccceee--CCeEEEEEECCCCCEEEEEee
Q 040429          117 LLSFTVTDINSAVTKLMALGAELDGSIKYE--IHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       117 ~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++|.|+|+++++++|+++|++ ..++...  +++++++|+||+||.|+|+++
T Consensus       104 ~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~  155 (166)
T 1xy7_A          104 TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEK  155 (166)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC-
T ss_pred             EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEee
Confidence            7999999999999999999999 8777643  339999999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.69  E-value=1.4e-16  Score=124.67  Aligned_cols=110  Identities=9%  Similarity=0.076  Sum_probs=83.6

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEE-ecccEEEEEeCC--eEEEEEeCCCCCcccCCCeEEEEEEeCC---H
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNV-CTLRWAELQSGP--LKLALMQSPSDHVVQNGNSSLLSFTVTD---I  125 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~-~~~~~~~~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l  125 (168)
                      |...+++|+.|.|+|+++|++||+++|||++.. ..+..+.+..++  ..+.+...+      .....+++|.|++   +
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~~v~~~~dl   74 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGE------HDRLLEAGWECANAEGL   74 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCSSCEEEESSSSSCSEEEEECS------SCEEEEEEEECSSHHHH
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCCCeEEEEeCCCcEEEEEecCC------CCCcceEEEEeCCHHHH
Confidence            444789999999999999999999999999987 555555555432  456555432      2234579999965   8


Q ss_pred             HHHHHHHHHCCCeEecccee----eCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKY----EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+++..++..    ...++.+||+|||||.|||++.
T Consensus        75 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           75 QEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             HHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            88999999999987643321    2456899999999999999985

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.69  E-value=5.1e-16  Score=124.13  Aligned_cols=109  Identities=16%  Similarity=0.108  Sum_probs=86.5

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeCC---H
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVTD---I  125 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l  125 (168)
                      ...+++|+.|.|+|+++|++||+++|||++....+....+..    .++.+.+...+.      ....+++|.|+|   +
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~------~g~~~~af~v~~~~dl   81 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETLDFFTKFLGMYVTHREGQSVYLRGYEDPYPWSLKITEAPE------AGMGHAAMRTSSPEAL   81 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEETTEEEEECTTCSSSCSEEEEECSS------CEEEEEEEEESSHHHH
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecCCEEEEEecCCCCceEEEEeeCCC------CCcceEEEEeCCHHHH
Confidence            347899999999999999999999999999987666666654    245566665432      225579999987   8


Q ss_pred             HHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+++...+.....++.+||+|||||.|||+..
T Consensus        82 d~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           82 ERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             HHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            999999999999987554433446899999999999999863

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.68  E-value=3.3e-15  Score=106.31  Aligned_cols=109  Identities=12%  Similarity=0.039  Sum_probs=82.7

Q ss_pred             cccEEEEEeC-CHHHHHHHHHhccCCEEEEec----------------c--cEEEEEeCCeEEEEEeCCCC-CcccCCCe
Q 040429           56 SFRWILQLHK-DVPKAARFYSEGLDFTVNVCT----------------L--RWAELQSGPLKLALMQSPSD-HVVQNGNS  115 (168)
Q Consensus        56 ~i~hv~l~v~-D~~~a~~FY~~vLGf~~~~~~----------------~--~~~~~~~~~~~i~l~~~~~~-~~~~~~~~  115 (168)
                      ++. ..|.+. |+++|++||+++||+++....                +  .++.+..++..+.+...... ..+.... 
T Consensus         4 ~~~-p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~~~~~~~~g-   81 (149)
T 1u6l_A            4 QIV-PYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKG-   81 (149)
T ss_dssp             EEE-EEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSCCCCCCS-
T ss_pred             eEE-EEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCccCCCCCCc-
Confidence            443 678888 999999999999999987530                1  24567778888877654211 1111112 


Q ss_pred             EEEEEEeCC---HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          116 SLLSFTVTD---INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       116 ~~~~~~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ..++|.|+|   +++++++|. +|+++..++...++| ++.+|+||+||.|+|.++
T Consensus        82 ~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEe
Confidence            468999998   889999985 799988888877777 889999999999999875

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.68  E-value=2.1e-16  Score=123.56  Aligned_cols=107  Identities=14%  Similarity=0.090  Sum_probs=84.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC--eEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP--LKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      .+|+|+.|.|+|+++|++||+++|||++....+....+..++  ..+.+...+      .....+++|.|+   |+++++
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~f~v~~~~dl~~~~   76 (297)
T 1lgt_A            3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGE------VDDLAFAGYEVADAAGLAQMA   76 (297)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECT------TCEEEEEEEEESSHHHHHHHH
T ss_pred             eEEEEEEEEcCCHHHHHHHHHHccCCEEeecCCCeEEEEeCCCcEEEEEecCC------CCCccEEEEEeCCHHHHHHHH
Confidence            579999999999999999999999999988766666665543  345554432      223457999998   999999


Q ss_pred             HHHHHCCCeEecccee----eCCeEEEEEECCCCCEEEEEee
Q 040429          130 TKLMALGAELDGSIKY----EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++|+++...+..    ...++.+||.|||||.|||+++
T Consensus        77 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  118 (297)
T 1lgt_A           77 DKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (297)
T ss_dssp             HHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEEC
Confidence            9999999987644321    2456899999999999999975

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.68  E-value=2.1e-16  Score=124.12  Aligned_cols=143  Identities=11%  Similarity=0.003  Sum_probs=91.9

Q ss_pred             eeecCcceeeecchhccccccchhhhccccc-cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-----c---cE
Q 040429           19 LHSLSGSLVKSSARLSKVHKRDEVRERERER-RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-----L---RW   89 (168)
Q Consensus        19 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----~---~~   89 (168)
                      +.||+|..+++...........-......+. -.....+++|+.|.|+|+++|++|| ++|||++....     +   ..
T Consensus       111 ~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~  189 (302)
T 2ehz_A          111 TEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAE  189 (302)
T ss_dssp             EECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEE
T ss_pred             EECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceE
Confidence            4778999999877543210000000000000 0012258999999999999999999 99999976431     1   12


Q ss_pred             EEE-EeC--CeEEEEEeCCCCCcccCCCeEEEEEEeCCHHH---HHHHHHHCCCeEeccc-eeeCCe-EEEEEECCCCCE
Q 040429           90 AEL-QSG--PLKLALMQSPSDHVVQNGNSSLLSFTVTDINS---AVTKLMALGAELDGSI-KYEIHG-KVAAMRCIDGHM  161 (168)
Q Consensus        90 ~~~-~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~---~~~~l~~~G~~~~~~~-~~~~~g-~~~~~~DPdGn~  161 (168)
                      ..+ ..+  ++.+++...+     ..+...|++|.|+|+++   .+++|+++|+++..++ ++..++ +++||+|||||.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~-----~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~  264 (302)
T 2ehz_A          190 LSFMHCNARDHSIAFGAMP-----AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWL  264 (302)
T ss_dssp             EEEEBSSSBSCSEEECSCC-----CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSE
T ss_pred             EEEEEeCCCCcEEEEecCC-----CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcE
Confidence            222 222  3455554322     12445689999998876   5669999999987544 344444 789999999999


Q ss_pred             EEEEee
Q 040429          162 LGLYEP  167 (168)
Q Consensus       162 iel~e~  167 (168)
                      |||+..
T Consensus       265 iEl~~~  270 (302)
T 2ehz_A          265 IEPGWR  270 (302)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.68  E-value=1.9e-16  Score=123.53  Aligned_cols=107  Identities=13%  Similarity=0.115  Sum_probs=82.8

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCC--eEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGP--LKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+....+..++  ..+.+...+      .....+++|.|+   |+++++
T Consensus         3 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~l~~~~~~~~l~~~~~~------~~~~~~~~f~v~~~~dl~~~~   76 (292)
T 1kw3_B            3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQPGE------LDDLAYAGLEVDDAAALERMA   76 (292)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECT------TCEEEEEEEECSSHHHHHHHH
T ss_pred             eeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCCCeEEEEcCCceEEEEEccCC------CCCccEEEEEECCHHHHHHHH
Confidence            579999999999999999999999999987655555555543  334443321      123457999998   899999


Q ss_pred             HHHHHCCCeEecccee----eCCeEEEEEECCCCCEEEEEee
Q 040429          130 TKLMALGAELDGSIKY----EIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++|+++..++..    ...++.+||+|||||.|||++.
T Consensus        77 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  118 (292)
T 1kw3_B           77 DKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (292)
T ss_dssp             HHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEEC
Confidence            9999999987654432    3455899999999999999975

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.67  E-value=4e-16  Score=122.43  Aligned_cols=111  Identities=14%  Similarity=0.062  Sum_probs=83.5

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-ccEEEEEe--CCeEEEEEeCCCCCcccCCCeEEEEEEeC---C
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-LRWAELQS--GPLKLALMQSPSDHVVQNGNSSLLSFTVT---D  124 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---d  124 (168)
                      .|...+++|+.|.|+|+++|++||+++|||++.... .....+..  +++.+.+...+.      ....+++|.|.   |
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~~~~~~v~~~~d   77 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRMDYWHHRIVVHHNGQ------DDLEYLGWRVAGKPE   77 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSCSSEEEEESSSBSCSEEEESSCC------SEEEEEEEEESSHHH
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccCCcceEEEeCCCceEEEEecCCC------CCeeEEEEEECCHHH
Confidence            355579999999999999999999999999998754 23333433  345566654321      22457889884   7


Q ss_pred             HHHHHHHHHHCCCeEeccceee----CCeEEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIKYE----IHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+++..++...    ..++.+||+|||||.|||++.
T Consensus        78 l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           78 FEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             HHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             HHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            9999999999999876544321    345899999999999999874

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.66  E-value=6.1e-16  Score=122.72  Aligned_cols=110  Identities=16%  Similarity=0.191  Sum_probs=87.8

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe-C---CeEEEEEeCCCCCcccCCCeEEEEEEe---CC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS-G---PLKLALMQSPSDHVVQNGNSSLLSFTV---TD  124 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~-~---~~~i~l~~~~~~~~~~~~~~~~~~~~v---~d  124 (168)
                      |...+++|+.|.|+|++++++||+++|||++....+..+.+.. +   ++.+.+.+.+.      ....+++|.|   +|
T Consensus        13 ~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~------~~~~~~~f~v~~~~d   86 (323)
T 1f1u_A           13 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPI------AAVAAFAYRVKSPAE   86 (323)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSS------CEEEEEEEEESSHHH
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecCCEEEEEecCCCCcEEEEEEECCC------CCeeEEEEEeCCHHH
Confidence            3447899999999999999999999999999887666676764 3   45677765431      2345799999   78


Q ss_pred             HHHHHHHHHHCCCeEeccce--eeCCeEEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIK--YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~--~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+.+..++.  ....++.++|.||+||.|||++.
T Consensus        87 l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           87 VDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             HHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            99999999999998765543  23345889999999999999875

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.64  E-value=1e-15  Score=120.12  Aligned_cols=107  Identities=19%  Similarity=0.204  Sum_probs=82.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-cEEEEEeC----CeEEEEEeCCCCCcccCCCeEEEEEEe---CCHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-RWAELQSG----PLKLALMQSPSDHVVQNGNSSLLSFTV---TDIN  126 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~v---~dl~  126 (168)
                      .+++|+.|.|+|+++|++||+++|||++....+ ....+..+    ...+.+...+      .....+++|.|   +|++
T Consensus         6 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~------~~~~~~~~f~v~~~~dv~   79 (307)
T 1mpy_A            6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD------EPGMDFMGFKVVDEDALR   79 (307)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSCEEEECTTCCBSCSEEEEECS------SCEEEEEEEEESCHHHHH
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCCCcEEEEecCCCCceEEEEccCC------CCCcceEEEEeCCHHHHH
Confidence            689999999999999999999999999987653 44444442    2334443322      12345799999   8999


Q ss_pred             HHHHHHHHCCCeEeccce--eeCCeEEEEEECCCCCEEEEEee
Q 040429          127 SAVTKLMALGAELDGSIK--YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       127 ~~~~~l~~~G~~~~~~~~--~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +++++|+++|+++..++.  ...+++.++|+|||||.|||+++
T Consensus        80 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           80 QLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             HHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999998765543  23345889999999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.64  E-value=2.9e-15  Score=121.21  Aligned_cols=106  Identities=18%  Similarity=0.213  Sum_probs=84.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~  127 (168)
                      .+|.|+.|.|+|+++|++||+++|||+++...++.+.+..    .++.+.+.+.+.      ....+++|.+.   ++++
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~~~~~lr~~~~~~~~~l~l~~~~~------~gl~~~a~~v~s~~dLd~   89 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDENQIYLRSFEEFIHHNLVLTKGPV------AALKAMAFRVRTPEDVDK   89 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSS------CEEEEEEEEESSHHHHHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcCCEEEEEeCCCCcceEEEeccCCC------CCcceEEEEeCCHHHHHH
Confidence            6899999999999999999999999999998887777765    245677766542      23456889885   4788


Q ss_pred             HHHHHHHCCCeEeccce-e-eCCeEEEEEECCCCCEEEEEe
Q 040429          128 AVTKLMALGAELDGSIK-Y-EIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~-~-~~~g~~~~~~DPdGn~iel~e  166 (168)
                      +.++|+++|+.+..... . ...++.++|.|||||.|||+.
T Consensus        90 ~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           90 AEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             HHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             HHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence            89999999998764332 2 234488999999999999985

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.60  E-value=6.7e-15  Score=117.35  Aligned_cols=110  Identities=15%  Similarity=0.087  Sum_probs=78.3

Q ss_pred             cccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc---------------cE--EEEEe----CCeEEEEEeCCCC-
Q 040429           50 RVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL---------------RW--AELQS----GPLKLALMQSPSD-  107 (168)
Q Consensus        50 ~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---------------~~--~~~~~----~~~~i~l~~~~~~-  107 (168)
                      ..|+..+++|+.|.|+|+++|++||+++|||++.....               .|  ..+..    +...+.|...... 
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            45555799999999999999999999999999876421               12  12222    2455666543322 


Q ss_pred             CcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          108 HVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       108 ~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .........|++|.|+|+   +++++++|+++...+     +..+||.|||||.|||++.
T Consensus       101 ~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~-----~~~~~~~DPdG~~iel~~~  152 (330)
T 3zi1_A          101 DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA-----EGVFETEAPGGYKFYLQNR  152 (330)
T ss_dssp             CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE-----TTEEEEECTTSCEEEEESS
T ss_pred             ccccCCCeeEEEEECchH---HHHHHHcCCceeccC-----CceEEEECCCCCEEEEEec
Confidence            111223457899999987   677888999876433     3478999999999999985

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.60  E-value=4e-14  Score=99.86  Aligned_cols=111  Identities=14%  Similarity=0.030  Sum_probs=82.1

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhcc-CCEEEEe---c-------c--cEEEEEeCCeEEEEEeCCCCCcccCCCeEEE
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGL-DFTVNVC---T-------L--RWAELQSGPLKLALMQSPSDHVVQNGNSSLL  118 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vL-Gf~~~~~---~-------~--~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~  118 (168)
                      |+.+++..+.++..|.++|++||+++| |+++...   .       +  .++.+..++..+.+...... .. ..  ..+
T Consensus         1 M~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~~-~~-~~--~sl   76 (139)
T 1tsj_A            1 MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSG-TE-LP--ISL   76 (139)
T ss_dssp             CCCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------C--CCE
T ss_pred             CCCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCCC-CC-ce--EEE
Confidence            344677777666779999999999999 9998742   1       1  34557778777766543211 11 11  358


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          119 SFTVTD---INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       119 ~~~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++.++|   +++++++|. +|+++..++...++| ++.+|+||+||.|+|..+
T Consensus        77 ~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           77 FVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             EEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            888987   788899998 799998888877777 899999999999999865

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.57  E-value=3.5e-14  Score=114.10  Aligned_cols=116  Identities=17%  Similarity=0.188  Sum_probs=84.9

Q ss_pred             ccccccccEEEEEeC--CHHHHHHHHHhccCCEEEEec----c----cEEEEEe--CCeEEEEEeCCCC--Cc-------
Q 040429           51 VMAAASFRWILQLHK--DVPKAARFYSEGLDFTVNVCT----L----RWAELQS--GPLKLALMQSPSD--HV-------  109 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~----~----~~~~~~~--~~~~i~l~~~~~~--~~-------  109 (168)
                      .+...+++|+.|.|+  |++++++||+++|||++....    +    ....+..  +...|.|+.....  ..       
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            344478999999999  999999999999999987532    1    1222333  4578888765421  11       


Q ss_pred             -ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEecccee---------e----CCe-----EEEEEECCCCCEEEEEe
Q 040429          110 -VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKY---------E----IHG-----KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       110 -~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~---------~----~~g-----~~~~~~DPdGn~iel~e  166 (168)
                       ...+...|++|.|+|+++.+++|+++|+++...+..         +    +.+     ..+|++||||+++||+.
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFT  308 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEB
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEc
Confidence             012356789999999999999999999997655421         0    011     27999999999999997

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.50  E-value=1.1e-12  Score=95.47  Aligned_cols=106  Identities=14%  Similarity=0.052  Sum_probs=81.2

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEe--c---------------c---cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEE
Q 040429           60 ILQLHKDVPKAARFYSEGLDFTVNVC--T---------------L---RWAELQSGPLKLALMQSPSDHVVQNGNSSLLS  119 (168)
Q Consensus        60 v~l~v~D~~~a~~FY~~vLGf~~~~~--~---------------~---~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~  119 (168)
                      ..|.+.|.++|++||+++||+++...  .               .   ..+.+..++..|.+....+. ....+....++
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-~~~~~~~~sl~  107 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-ADKINNGISLL  107 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-CCCCCSSEEEE
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-CCCCCCcEEEE
Confidence            45677799999999999999997642  1               1   35677888988888875322 12233334566


Q ss_pred             EEe--------CCHHHHHHHHHHCC-CeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          120 FTV--------TDINSAVTKLMALG-AELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       120 ~~v--------~dl~~~~~~l~~~G-~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      +.+        +|+++++++|.+.| +++..++...++| ++.+|+||+||.|+|..
T Consensus       108 l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~  164 (172)
T 3l20_A          108 IDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHG  164 (172)
T ss_dssp             EEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEE
T ss_pred             EEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEe
Confidence            666        58999999999999 7888888877766 89999999999999964

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.50  E-value=7.8e-13  Score=107.37  Aligned_cols=116  Identities=16%  Similarity=0.139  Sum_probs=88.7

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec----c----cEEEEEeCCeEEEEEeC--CCCC---------cccC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----L----RWAELQSGPLKLALMQS--PSDH---------VVQN  112 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~----~~~~~~~~~~~i~l~~~--~~~~---------~~~~  112 (168)
                      |...+++||.|.|+|++++++||+++|||++....    .    ....+..+...+.|...  ++..         ..+.
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g   97 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHG   97 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHC
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcC
Confidence            44478999999999999999999999999998752    2    22334557888888864  2211         0112


Q ss_pred             CCeEEEEEEeCCHHHHHHHHHHCCCeEecccee---eCCe-EEEEEECCCCCEEEEEee
Q 040429          113 GNSSLLSFTVTDINSAVTKLMALGAELDGSIKY---EIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       113 ~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~---~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ....+++|.|+|+++.+++|+++|+.+..++..   +.+. +.+.++||+|+.++|+++
T Consensus        98 ~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           98 DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            356689999999999999999999998765542   2333 578899999999999986

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.48  E-value=8.5e-13  Score=105.96  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=88.8

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--c--cEEEEEeCCeEEEEEe--CCCCC-----cccCCCeEEEEE
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--L--RWAELQSGPLKLALMQ--SPSDH-----VVQNGNSSLLSF  120 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~--~~~~~~~~~~~i~l~~--~~~~~-----~~~~~~~~~~~~  120 (168)
                      |...+++||.+.|+|++++++||+++|||++....  .  .+..+..+...+.+..  .+...     ..+.....+++|
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf   80 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAM   80 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEE
Confidence            34478999999999999999999999999988763  2  4555667888888876  33220     112234567999


Q ss_pred             EeCCHHHHHHHHHHCCCeEecccee-eCCe-EEEEEECCCCCEEEEEee
Q 040429          121 TVTDINSAVTKLMALGAELDGSIKY-EIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~dl~~~~~~l~~~G~~~~~~~~~-~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .|+|+++++++|+++|+.+..++.. ..+. ..+.+.||+|+.++|+++
T Consensus        81 ~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~  129 (357)
T 2r5v_A           81 ATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQR  129 (357)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEEC
T ss_pred             EECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEec
Confidence            9999999999999999998755542 2222 578899999999999886

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.48  E-value=2.6e-12  Score=90.39  Aligned_cols=106  Identities=14%  Similarity=0.069  Sum_probs=80.1

Q ss_pred             EEEeC-CHHHHHHHHHhccC-CEEEEe---c------c---cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCC--
Q 040429           61 LQLHK-DVPKAARFYSEGLD-FTVNVC---T------L---RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD--  124 (168)
Q Consensus        61 ~l~v~-D~~~a~~FY~~vLG-f~~~~~---~------~---~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d--  124 (168)
                      .|.+. |.++|++||+++|| .++...   .      .   ..+.+..++..|.+...........+....+++.++|  
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~~~~~~~~l~l~~~d~~   93 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNFTFTPAMSLYVTCETEE   93 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSCCCCTTSCEEEEESSHH
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCCCCCCCEEEEEEcCCHH
Confidence            46666 89999999999999 566432   1      1   3677888998888876432211122223458999999  


Q ss_pred             -HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          125 -INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 -l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                       +++++++|. .|.++..++...++| ++.+++||+|+.|+|..+
T Consensus        94 evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           94 EIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             HHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence             999999995 688988888877777 899999999999999754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.43  E-value=2.2e-12  Score=106.17  Aligned_cols=117  Identities=20%  Similarity=0.137  Sum_probs=84.9

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEE--EEEeCCeEEEEEeCCCCC--------------
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWA--ELQSGPLKLALMQSPSDH--------------  108 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~--~~~~~~~~i~l~~~~~~~--------------  108 (168)
                      .|...+++||.|.|+|+++|++||+++|||++....+      .+.  .+..++..+.|.....+.              
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            3445789999999999999999999999999887631      233  345578888888752221              


Q ss_pred             ------------cccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          109 ------------VVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       109 ------------~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                                  ..+.+...+++|.|+|+++.+++++++|+.+..++....+. ....+++|+|+.++|+++
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSY  171 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEE
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEec
Confidence                        01224567899999999999999999999987665543222 455566666666666654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.33  E-value=1.8e-11  Score=100.57  Aligned_cols=116  Identities=17%  Similarity=0.127  Sum_probs=80.7

Q ss_pred             ccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec------ccE--EEEEeCCeEEEEEeCCCCC-------------c
Q 040429           51 VMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT------LRW--AELQSGPLKLALMQSPSDH-------------V  109 (168)
Q Consensus        51 ~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~------~~~--~~~~~~~~~i~l~~~~~~~-------------~  109 (168)
                      .|...+++||.|.|+|+++|++||++.|||++....      ..+  ..+..++..+.|.....+.             .
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccch
Confidence            444579999999999999999999999999988762      123  3356688889888652220             0


Q ss_pred             -------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          110 -------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       110 -------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                             .+.....+++|.|+|+++.+++++++|+.+..++.....+ +...+.+|.|..+.|++
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd  170 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVS  170 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEc
Confidence                   1224567899999999999999999999987655422111 23334444444444443

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=3.6e-11  Score=97.58  Aligned_cols=154  Identities=12%  Similarity=0.057  Sum_probs=97.9

Q ss_pred             eeeEEeeecCcceeeecchhccc----cccchhhhccccccccccccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc
Q 040429           14 VRIRVLHSLSGSLVKSSARLSKV----HKRDEVRERERERRVMAAASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL   87 (168)
Q Consensus        14 ~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~m~~~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~   87 (168)
                      +++-.+.++.|..+++..+....    +...........+......+|+|+.+.|+  |++++++||+++|||++.....
T Consensus       138 ~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~  217 (381)
T 1t47_A          138 VVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFV  217 (381)
T ss_dssp             EEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCSSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCB
T ss_pred             EEEEEEecCCCcEEEEEecCCCCCCCCCCCccccccccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecC
Confidence            44444577888887776543211    00000000000012233468999999999  9999999999999999876521


Q ss_pred             -----------cEEEEEe--CCeEEEEEeCCC--CCc--------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccce
Q 040429           88 -----------RWAELQS--GPLKLALMQSPS--DHV--------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIK  144 (168)
Q Consensus        88 -----------~~~~~~~--~~~~i~l~~~~~--~~~--------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~  144 (168)
                                 .+..+..  +...|.|.....  ...        ...++.+|++|.|+|+++.+++|+++|+++...+.
T Consensus       218 ~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~  297 (381)
T 1t47_A          218 GDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  297 (381)
T ss_dssp             CHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             cceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCc
Confidence                       1222222  456787776531  111        12335689999999999999999999999875543


Q ss_pred             eeCC------------------eEEEEEECCCCCEEEEEee
Q 040429          145 YEIH------------------GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       145 ~~~~------------------g~~~~~~DPdGn~iel~e~  167 (168)
                      .-..                  ...+|-+||+|.+++++..
T Consensus       298 ~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          298 SYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             GGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             cHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence            2111                  1257789999999998864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.27  E-value=1.8e-11  Score=98.34  Aligned_cols=113  Identities=12%  Similarity=0.127  Sum_probs=82.0

Q ss_pred             cccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc---c------EEEE-EeCCeEEEEEeC-CCCCc--------ccC
Q 040429           54 AASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL---R------WAEL-QSGPLKLALMQS-PSDHV--------VQN  112 (168)
Q Consensus        54 ~~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~---~------~~~~-~~~~~~i~l~~~-~~~~~--------~~~  112 (168)
                      ..+|+|+.+.|+  |++++++||+++|||++.....   .      ...+ ..+...|.|+.. .....        ...
T Consensus       156 i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~g  235 (357)
T 1cjx_A          156 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG  235 (357)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             eeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcCC
Confidence            368999999999  9999999999999999876521   1      1122 225677888765 22111        123


Q ss_pred             CCeEEEEEEeCCHHHHHHHHHHCCCeEec-cc---------eeeCCeE---------EEEEEC----CCCCEEEEEe
Q 040429          113 GNSSLLSFTVTDINSAVTKLMALGAELDG-SI---------KYEIHGK---------VAAMRC----IDGHMLGLYE  166 (168)
Q Consensus       113 ~~~~~~~~~v~dl~~~~~~l~~~G~~~~~-~~---------~~~~~g~---------~~~~~D----PdGn~iel~e  166 (168)
                      ++.+|++|.|+|+++.+++|+++|+++.. .+         +.+..+.         .+|-+|    |+|++++++.
T Consensus       236 ~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          236 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             CCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            34678999999999999999999999865 44         1223332         477788    8899999986

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.25  E-value=2.8e-11  Score=97.30  Aligned_cols=114  Identities=19%  Similarity=0.206  Sum_probs=83.0

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEeCCeEEEEEeCCCCC-----cccCCCeEEEEEEeCC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQSGPLKLALMQSPSDH-----VVQNGNSSLLSFTVTD  124 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~~~~~i~l~~~~~~~-----~~~~~~~~~~~~~v~d  124 (168)
                      |...+++||.+.|+|++++.+|| ++|||++....  ..+..+..+...+.+...++..     ..+.....+++|.|+|
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~iaf~V~D   86 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRVKD   86 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSSSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEESC
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCeeEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEEEEeCC
Confidence            44578999999999999999999 68999998753  3566667788888887644421     1123455679999999


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +++++++|+++|+.+..++. +.+. ....+++|+|..++|+++
T Consensus        87 ~~~~~~~l~~~G~~~~~~~~-~~g~~~~~~~~~~gg~~~~~vd~  129 (357)
T 1cjx_A           87 SQKAYNRALELGAQPIHIDT-GPMELNLPAIKGIGGAPLYLIDR  129 (357)
T ss_dssp             HHHHHHHHHHTTCCBCCCCC-CTTCBCCCEEECGGGCEEEEECC
T ss_pred             HHHHHHHHHHcCCEEeecCC-CCCcEEEEeeeCCCCeEEEEECC
Confidence            99999999999998765442 1221 345566666666666654

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.23  E-value=4.2e-10  Score=85.48  Aligned_cols=109  Identities=14%  Similarity=0.060  Sum_probs=78.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--CeEEEEEeCCCCCcc-cCC--CeEEEEEEeCCHHHHHHH
Q 040429           57 FRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PLKLALMQSPSDHVV-QNG--NSSLLSFTVTDINSAVTK  131 (168)
Q Consensus        57 i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~-~~~--~~~~~~~~v~dl~~~~~~  131 (168)
                      ....+|.|.|.+++++||+++|||++..+.+..+.+..+  ...+.+.+.|..... ..|  +...+++.+++-.++..-
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~~~a~lg~~~~~~~L~lEEsp~~~~~~~~Glkh~a~i~i~vp~~~el~~l   90 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEESAFLSLGDQTGLEKLVLEEAPSMRTRKVEGRKKLARLIVKVENPLEIEGI   90 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCEEEEEEECCTTTCBCCCSSCSEEEEEEEESSHHHHHHH
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccCcEEEeecCCCcceEEEEeCCCcccccccccceeeeEEEEcCCHHHHHHH
Confidence            445689999999999999999999999998888888763  244556665543322 233  333457999998888766


Q ss_pred             HHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          132 LMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       132 l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      |.. +..+. -.-.+.+|+.+|+.||+||.||++..
T Consensus        91 L~~-~~~~~-~~~~gdhgyA~yl~dPEGn~ieiyae  124 (244)
T 3e0r_A           91 LSK-TDSIH-RLYKGQNGYAFEIFSPEDDLILIHAE  124 (244)
T ss_dssp             HTT-CSCCS-EEEECSSSEEEEEECTTCCEEEEECC
T ss_pred             Hhc-ccccc-cccccCCcEEEEEECCCCCeEEEEEc
Confidence            654 54432 11245577889999999999999864

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.18  E-value=6.7e-10  Score=90.52  Aligned_cols=113  Identities=21%  Similarity=0.244  Sum_probs=87.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----c---EEEEEeCCeEEEEEeC--CCC-C-----cccCCCeEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----R---WAELQSGPLKLALMQS--PSD-H-----VVQNGNSSLL  118 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~---~~~~~~~~~~i~l~~~--~~~-~-----~~~~~~~~~~  118 (168)
                      .+++||.+.|+|++++++||++.|||++..+.+     .   ...+..++..+.|...  ++. .     ..+.....++
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~~i   89 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDI   89 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEE
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEEEE
Confidence            789999999999999999999999999987521     1   2345568888888773  321 0     0122345679


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccceee--CCe--EEEEEECCCCCEEEEEee
Q 040429          119 SFTVTDINSAVTKLMALGAELDGSIKYE--IHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       119 ~~~v~dl~~~~~~l~~~G~~~~~~~~~~--~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      +|.|+|+++.+++++++|+++..++...  ..|  ....+++|.|+...|++.
T Consensus        90 Af~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           90 AFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            9999999999999999999988776532  234  677799999999988874

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.92  E-value=6.6e-09  Score=85.46  Aligned_cols=90  Identities=10%  Similarity=0.035  Sum_probs=66.7

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc---------cE-E-EE--EeCCeEEEEEeCCC---CCc-------
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL---------RW-A-EL--QSGPLKLALMQSPS---DHV-------  109 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~---------~~-~-~~--~~~~~~i~l~~~~~---~~~-------  109 (168)
                      ...+|+|+.+.|+|++++++||+++|||++....+         .. . .+  ..+...|.|+....   ...       
T Consensus       199 ~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~  278 (424)
T 1sqd_A          199 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLE  278 (424)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhh
Confidence            34689999999999999999999999999887531         11 1 11  22567888877531   110       


Q ss_pred             -ccCCCeEEEEEEeCCHHHHHHHHHH----CCCeEecc
Q 040429          110 -VQNGNSSLLSFTVTDINSAVTKLMA----LGAELDGS  142 (168)
Q Consensus       110 -~~~~~~~~~~~~v~dl~~~~~~l~~----~G~~~~~~  142 (168)
                       ....+.+|++|.|+|+++.+++|++    +|+.+...
T Consensus       279 ~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          279 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence             1123568999999999999999999    89998754

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.83  E-value=4.2e-08  Score=80.53  Aligned_cols=90  Identities=13%  Similarity=0.097  Sum_probs=66.6

Q ss_pred             cccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--c--------EEEEE---eCCeEEEEEeCCC---CCc--------
Q 040429           54 AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--R--------WAELQ---SGPLKLALMQSPS---DHV--------  109 (168)
Q Consensus        54 ~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--~--------~~~~~---~~~~~i~l~~~~~---~~~--------  109 (168)
                      ..+|+|+.+.|+|++++++||+++|||++.....  +        ...+.   .+...|.|+....   ...        
T Consensus       197 ~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~  276 (418)
T 1sp8_A          197 LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDH  276 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHH
T ss_pred             cceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhc
Confidence            3689999999999999999999999999887531  1        11122   2567777776531   110        


Q ss_pred             ccCCCeEEEEEEeCCHHHHHHHHHH----CCCeEeccc
Q 040429          110 VQNGNSSLLSFTVTDINSAVTKLMA----LGAELDGSI  143 (168)
Q Consensus       110 ~~~~~~~~~~~~v~dl~~~~~~l~~----~G~~~~~~~  143 (168)
                      ....+.+|++|.|+||++.+++|++    +|+++...|
T Consensus       277 ~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          277 HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             cCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            1123568999999999999999999    799987543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.80  E-value=1.3e-07  Score=77.02  Aligned_cols=90  Identities=16%  Similarity=0.193  Sum_probs=67.0

Q ss_pred             cccccEEEEEeCC--HHHHHHHHHhccCCEEEEecc-----------cEEEEEe--CCeEEEEEeCCC--CCcc------
Q 040429           54 AASFRWILQLHKD--VPKAARFYSEGLDFTVNVCTL-----------RWAELQS--GPLKLALMQSPS--DHVV------  110 (168)
Q Consensus        54 ~~~i~hv~l~v~D--~~~a~~FY~~vLGf~~~~~~~-----------~~~~~~~--~~~~i~l~~~~~--~~~~------  110 (168)
                      ..+|+|+.+.|+|  ++++++||+++|||+.....+           .+..+..  +...|.|+....  ...+      
T Consensus       171 l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~fL~  250 (393)
T 3isq_A          171 LEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVD  250 (393)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHHHH
T ss_pred             eeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHHHH
Confidence            3689999999998  999999999999999866411           1222322  557888886432  1111      


Q ss_pred             --cCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          111 --QNGNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       111 --~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                        ...+..|++|.++|+.+.+++|+++|+.+...|
T Consensus       251 ~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          251 YNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence              123467999999999999999999999987543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.57  E-value=1.2e-06  Score=63.05  Aligned_cols=96  Identities=14%  Similarity=0.043  Sum_probs=68.4

Q ss_pred             EEEeC-CHHHHHHHHHhcc-CCEEEEe-----------cc--cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCC-
Q 040429           61 LQLHK-DVPKAARFYSEGL-DFTVNVC-----------TL--RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD-  124 (168)
Q Consensus        61 ~l~v~-D~~~a~~FY~~vL-Gf~~~~~-----------~~--~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d-  124 (168)
                      .|... |-++|++||+++| |.++...           .+  ..+.+..++..+.+...... .+ ......+++.++| 
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p~-~~-~~~~~sl~v~~~d~   87 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA-FR-HSEAFSFQVATDDQ   87 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT-CC-CCTTEEEEEEESSH
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCCC-cC-CCCceEEEEEeCCH
Confidence            45556 9999999999999 9998741           01  24667778888888764221 11 1223358888887 


Q ss_pred             --HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          125 --INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       125 --l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                        +++++++|.+.|.++.         ++-.++||.|+.|.|..+
T Consensus        88 ~e~d~~~~~L~~~Gg~v~---------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           88 AETDRLWNAIVDNGGEES---------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             HHHHHHHHHHHHTTCEEC---------STTEEECTTSCEEEEEEH
T ss_pred             HHHHHHHHHHHhCCCEEE---------EEEEEECCCCCEEEEEeE
Confidence              7778889987788866         223699999999998753

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=98.12  E-value=1.1e-05  Score=61.75  Aligned_cols=85  Identities=13%  Similarity=0.058  Sum_probs=56.6

Q ss_pred             CCCCceeeeEEeeecCcceeeecchhccccccchhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEec-
Q 040429            8 PWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCT-   86 (168)
Q Consensus         8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~-   86 (168)
                      +|.++.+.+   .||+|..+|+.++-.....      ...+.+.....+++||+|.|+|++++.+|| ++|||+..... 
T Consensus       119 ~~g~~~~~f---~DPdGn~iEl~~~~~~~~~------~~~~~~~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~~  188 (252)
T 3pkv_A          119 FFNAYSCYV---EDPSGNIIELISRQQAAPV------LDKPFSADQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQI  188 (252)
T ss_dssp             TTTEEEEEE---ECTTCCEEEEEEESSSSCC------CCSCCCGGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGGC
T ss_pred             cCCeEEEEE---ECCCCCEEEEEEeCCCCcc------ccCCCCHHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCCC
Confidence            444555544   5688888888875432210      011112233478999999999999999999 89999988752 


Q ss_pred             --ccEEEEEeCCeEEEEEe
Q 040429           87 --LRWAELQSGPLKLALMQ  103 (168)
Q Consensus        87 --~~~~~~~~~~~~i~l~~  103 (168)
                        ..|+.... +..+.+..
T Consensus       189 ~~~~f~~~G~-~g~~i~v~  206 (252)
T 3pkv_A          189 EPAGLNFIGD-QDLFLLLG  206 (252)
T ss_dssp             CTTSCEEEEE-TTEEEEEE
T ss_pred             ChheEEEcCC-CcEEEEEc
Confidence              35666655 66666664

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.95  E-value=1.8e-05  Score=60.12  Aligned_cols=122  Identities=13%  Similarity=0.032  Sum_probs=78.8

Q ss_pred             eecCcceeeecchhccccccc----hhhhccccccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC
Q 040429           20 HSLSGSLVKSSARLSKVHKRD----EVRERERERRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG   95 (168)
Q Consensus        20 ~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~   95 (168)
                      .||+|-.++++++.+.-.-+.    ...+..-...+++...+ ||.|.|+|.++|  ||++ +|+               
T Consensus       112 ~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~LnV~d~~~s--Fy~~-~~~---------------  172 (244)
T 3e0r_A          112 FSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SMELHLPTDIES--FLES-SEI---------------  172 (244)
T ss_dssp             ECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEEEEECTTCCC--SCCH-HHH---------------
T ss_pred             ECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEEEEcCchHHH--Hhhc-cCC---------------
Confidence            789999999999776444221    10111122556777888 999999999998  9997 655               


Q ss_pred             CeEEEEEeCCCCCccc----CCCeEEEEEEe--CCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429           96 PLKLALMQSPSDHVVQ----NGNSSLLSFTV--TDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus        96 ~~~i~l~~~~~~~~~~----~~~~~~~~~~v--~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      +.++.+..+.++..+.    .-....+-|.+  .|+.++.++|...|.-+..      ..+++.+.||+|+.|.|.+
T Consensus       173 ~~~~~F~~a~G~dl~~~~~~t~gLe~l~~~v~~~dl~~l~~~L~~~g~~idk------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          173 GASLDFIPAQGQDLTVDNTVTWDLSMLKFLVNELDIASLRQKFESTEYFIPK------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             TTTEEEEECCCTTTTCCTTSBSSEEEEEEEESSCCHHHHHHHTTTSCEECCT------TCCEEEEECTTSCEEEEEE
T ss_pred             cccEEEEcccCCCCCCCCCCccCceEEEEEeCHHHHHHHHHHHHhCCceEcc------cCCEEEEECCCCCEEEEEE
Confidence            2234444443332111    11222344444  6788999999887764332      2467889999999999875

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.76  E-value=2.5e-05  Score=69.26  Aligned_cols=110  Identities=16%  Similarity=0.190  Sum_probs=70.5

Q ss_pred             ccEEEEEe---CCHHHHHHHHHhccCCEEEEecccE---EEEEe--CCeEEEEEeCCCC------------Cc------c
Q 040429           57 FRWILQLH---KDVPKAARFYSEGLDFTVNVCTLRW---AELQS--GPLKLALMQSPSD------------HV------V  110 (168)
Q Consensus        57 i~hv~l~v---~D~~~a~~FY~~vLGf~~~~~~~~~---~~~~~--~~~~i~l~~~~~~------------~~------~  110 (168)
                      ...+.|.+   .-++++++||++.|++.....++.|   ..+..  +...+.+...+..            ..      .
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (941)
T 3opy_B           10 TSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRK   89 (941)
T ss_dssp             EEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC------
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccc
Confidence            34445544   4578999999999999877766663   33322  3445554433111            00      0


Q ss_pred             cC-CCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          111 QN-GNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       111 ~~-~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .. +..+++.|.+.|++++.+.|.+.+.++...|. ..+...+|..||+||.|+|.+.
T Consensus        90 dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps-~~~~~e~yt~DPlGNvIgfs~~  146 (941)
T 3opy_B           90 DWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPN-EISPFEVYTVDPLGSLIGFSGF  146 (941)
T ss_dssp             ----CCCEEEEEESCHHHHHHHHHTTTCCCBCSSS-SCSCEEECCSSCCEEEECC-CC
T ss_pred             cccccCceEEEEeCCHHHHHHHHHhcCCccccCCC-cCCCceEEeECCCCCEEEEecc
Confidence            11 22347999999999999999998887654331 1223689999999999998753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.82  E-value=0.085  Score=40.64  Aligned_cols=79  Identities=11%  Similarity=0.108  Sum_probs=55.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccC-----CEEEEec-----ccE-EEEEeCCeEEEEEeCCCCC----------c----
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLD-----FTVNVCT-----LRW-AELQSGPLKLALMQSPSDH----------V----  109 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLG-----f~~~~~~-----~~~-~~~~~~~~~i~l~~~~~~~----------~----  109 (168)
                      .+++|+++.|++++        .||     |.+....     ... ..+..++..|.++......          .    
T Consensus        23 ~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~~f   94 (274)
T 3p8a_A           23 LKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAF   94 (274)
T ss_dssp             CEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGTCT
T ss_pred             ccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccchH
Confidence            78999999999874        367     8877642     122 2223388888887653310          0    


Q ss_pred             -------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEec
Q 040429          110 -------VQNGNSSLLSFTVTDINSAVTKLMALGAELDG  141 (168)
Q Consensus       110 -------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~  141 (168)
                             ....+...+++.++|+++..+++.++|+...+
T Consensus        95 ~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           95 ATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             HHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence                   11125667999999999999999999998654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.30  E-value=0.032  Score=43.06  Aligned_cols=48  Identities=8%  Similarity=0.044  Sum_probs=43.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALM  102 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~  102 (168)
                      .+|.++++.++|.+++++.|+++||.......+.+..+..++..|.+.
T Consensus       189 ~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~~~~~l~l~~~~i~f~  236 (274)
T 3p8a_A          189 FSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFR  236 (274)
T ss_dssp             EEEEEEEEEETTHHHHHHHHHHHHCCEEEEECSSEEEEECTTCCCEEE
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHHhCCCccccCCceEEEecCCcEEEEE
Confidence            689999999999999999999999999999888898888887777766

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=89.00  E-value=2.3  Score=27.10  Aligned_cols=52  Identities=21%  Similarity=0.383  Sum_probs=35.9

Q ss_pred             eEEEEEEeCCHHHHHHHHHH-CCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          115 SSLLSFTVTDINSAVTKLMA-LGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       115 ~~~~~~~v~dl~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ..|+.+.|.|+++..+-..+ .|.+..........+ ..+++. .+|..++++++
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~   59 (134)
T 3rmu_A            6 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVN-LGNTKMELLHP   59 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEE-CSSSEEEEEEE
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEe-cCCEEEEEEec
Confidence            45799999999999998866 899876443333334 344444 46677888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=87.58  E-value=3.3  Score=26.72  Aligned_cols=53  Identities=21%  Similarity=0.317  Sum_probs=37.2

Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEeccce-eeCCe-EEEEEECCCCCEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDGSIK-YEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~-~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ...|+++.|.|+++..+-....|.+...... ....+ +..++.. +|..+||+++
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   61 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAP   61 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEE
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEec
Confidence            4568999999999999977788998765432 22333 4444444 6778888875

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=87.42  E-value=1.7  Score=39.09  Aligned_cols=46  Identities=22%  Similarity=0.267  Sum_probs=32.7

Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEE
Q 040429          117 LLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLY  165 (168)
Q Consensus       117 ~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~  165 (168)
                      .+.|.+.|++.+.+.|.....+.. |  .......+|..||=||.+.|.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~dp~~~~~~~~  171 (989)
T 3opy_A          126 EVTFFTASIDKLKAKLIEIGAEII-P--SKIDLVEFSTRDPMGDVISFS  171 (989)
T ss_dssp             EEEEECSCHHHHHHHHHHSSCCBC-C--CC--CCCEEEESSSEEEEECC
T ss_pred             eEEEEeCcHHHHHHHhhhcccccC-C--CCCCceeEEEecCCCCEEeee
Confidence            488899999999999987633321 1  111225689999999999874

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=85.40  E-value=5  Score=26.18  Aligned_cols=54  Identities=11%  Similarity=0.062  Sum_probs=38.5

Q ss_pred             CeEEEEEEeCCHHHHHHHHH-HCCCeEeccceeeCCe-EEEEEECCCC-----CEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLM-ALGAELDGSIKYEIHG-KVAAMRCIDG-----HMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~-~~G~~~~~~~~~~~~g-~~~~~~DPdG-----n~iel~e~  167 (168)
                      ...|+.+.|.|+++..+-.. ..|.+..........+ ..+++..+++     ..++|+++
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            45679999999999988775 5788875433323234 5677777775     78898875

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=84.41  E-value=3.7  Score=27.85  Aligned_cols=53  Identities=23%  Similarity=0.312  Sum_probs=36.4

Q ss_pred             CeEEEEEEeCCHHHHHHHHHH-CCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLMA-LGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ...|+.+.|.|+++..+-... .|.+..........+ ..+++.. .|..++|+++
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~   62 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEP   62 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEE
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeE
Confidence            456899999999999998866 898876433323333 4444544 4567888775

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=83.04  E-value=5.1  Score=26.86  Aligned_cols=55  Identities=22%  Similarity=0.233  Sum_probs=36.0

Q ss_pred             CCCeEEEEEEeCCHHHHHHHHHH-CCCeEeccceee--------------CCe-EEEEEECCCCCEEEEEee
Q 040429          112 NGNSSLLSFTVTDINSAVTKLMA-LGAELDGSIKYE--------------IHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       112 ~~~~~~~~~~v~dl~~~~~~l~~-~G~~~~~~~~~~--------------~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .....|+++.|.|+++..+-... .|.+........              ..+ +.+++.. .+..+||+++
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~   87 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEP   87 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEE
Confidence            44567899999999999998864 888754321111              123 4444443 4678888875

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=82.63  E-value=6.2  Score=24.92  Aligned_cols=52  Identities=13%  Similarity=0.162  Sum_probs=36.5

Q ss_pred             EEEEEEeCCHHHHHHHH-HHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          116 SLLSFTVTDINSAVTKL-MALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       116 ~~~~~~v~dl~~~~~~l-~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .|+.+.|.|+++..+-. ...|.+..........+ ..+++..++|..++|++.
T Consensus         5 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   58 (127)
T 3e5d_A            5 EHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSR   58 (127)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEE
T ss_pred             EEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEec
Confidence            47999999999998877 45688865443222223 455666667888998864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=82.62  E-value=6.3  Score=25.83  Aligned_cols=54  Identities=20%  Similarity=0.297  Sum_probs=36.9

Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEecccee-----------eCCe-EEEEEECCCC-CEEEEEee
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDGSIKY-----------EIHG-KVAAMRCIDG-HMLGLYEP  167 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~-----------~~~g-~~~~~~DPdG-n~iel~e~  167 (168)
                      ...|+.+.|.|+++..+-....|.+.......           ...+ ..+++.-++| ..++|+++
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            34579999999999988775589887533221           1123 5667777776 68888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	168
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	9e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	0.002
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.003
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	0.004

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 54.1 bits (129), Expect = 9e-11
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 1/104 (0%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
            +VP+        LD   +     +A+   G   L L Q+    +    +  ++   V D
Sbjct: 11  SNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGIIIHIEVED 70

Query: 125 INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP 167
           ++    +L  LG ++         G +   ++   G +L  Y  
Sbjct: 71  VDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM 114

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 34.2 bits (77), Expect = 0.002
 Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
            +  +A  FY + L   V +         S     A +    +      +   LS  V +
Sbjct: 11  PEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREG-GSGTDVPDLSIEVDN 69

Query: 125 INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGL 164
            +    +++  G  ++     E  G +   +R   G ++ +
Sbjct: 70  FDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 33.8 bits (76), Expect = 0.003
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 11/110 (10%)

Query: 65  KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTD 124
           +DV +A  F+++ L F+       +A +    + L +       V  N         V  
Sbjct: 13  RDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQ---AWVWVRG 69

Query: 125 INSAVTKLMALGAEL--------DGSIKYEIHGKVAAMRCIDGHMLGLYE 166
           ++    +   + +             I  +  G+  A+R   G+ +    
Sbjct: 70  LDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 33.8 bits (77), Expect = 0.004
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 68  PKAARFYSEGLDFT-VNVCTLRWAEL-QSGPLKLAL---MQSPSDHVVQNGNSSL--LSF 120
           P       E + FT V     +   L + G + L L     S + +       S+  ++F
Sbjct: 20  PGTLEPIFEIMGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAF 79

Query: 121 TVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
            V D   A  + + LGA+        +   + A++ I G  L L +  
Sbjct: 80  RVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.93
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.86
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.85
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.85
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.84
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.84
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.84
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.83
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.83
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.83
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.83
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.83
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.82
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.82
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.82
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.81
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.8
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.79
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.79
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.76
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.75
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.7
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.69
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.66
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.64
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.58
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.46
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.36
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.24
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.97
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.9
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.86
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.72
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.69
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.45
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.85
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	83.15
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	81.34

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.93  E-value=1.4e-25  Score=152.13  Aligned_cols=113  Identities=16%  Similarity=0.174  Sum_probs=99.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMA  134 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~  134 (168)
                      ++++|+.|.|+|+++|++||+++||+++....+.|+.+..++..+++...........+...+++|.|+|+++++++|++
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~f~v~D~d~~~~~l~~   80 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGIIIHIEVEDVDQNYKRLNE   80 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEETTEEEEEETTEEEEEESSCSSSCCCCCSCEEEEEECSCHHHHHHHHHH
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecCCeEEEEEcCceeeeeecccCCCCCCCcceEEEEEECCHHHHHHHHHh
Confidence            37899999999999999999999999998888899999999999999876554444455556799999999999999999


Q ss_pred             CCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          135 LGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       135 ~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +|+.+..++...++| +.+||+|||||.|||+|.
T Consensus        81 ~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          81 LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             hccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            999988777766666 899999999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=2.9e-21  Score=129.17  Aligned_cols=107  Identities=12%  Similarity=0.098  Sum_probs=82.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEE-e-CCeEEEEEeCCCCCcccCCCeEEEEEEeCC---HHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQ-S-GPLKLALMQSPSDHVVQNGNSSLLSFTVTD---INSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~-~-~~~~i~l~~~~~~~~~~~~~~~~~~~~v~d---l~~~~  129 (168)
                      ++|+|+.|.|+|+++|++||+++|||++....+....+. . +++.+.+...+...   .+...|++|.++|   ++++.
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~h~~f~v~~~~~v~~~~   78 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQ---YPKTFHVGFPQESEEQVDKIN   78 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETTTEEEEECTTCCEEEEEECSSCC---CCTTCCEEEECSSHHHHHHHH
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecCcceeeeecceeeeeeeeeeccc---ccccceeeeeeccccchhhhh
Confidence            689999999999999999999999999987765433333 3 56777777655432   2234579999977   66788


Q ss_pred             HHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          130 TKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++++++|+++..++  ..+++.+||+|||||+|||++
T Consensus        79 ~~l~~~G~~~~~~~--~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          79 QRLKEDGFLVEPPK--HAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             HHHHHTTCCCCCCE--EC-CEEEEEEETTTEEEEEEC
T ss_pred             hhHHHcCCccccCC--CCceEEEEEECCCCCEEEEEC
Confidence            89999999975443  234678999999999999974

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.85  E-value=2e-20  Score=129.95  Aligned_cols=111  Identities=23%  Similarity=0.201  Sum_probs=89.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCC--CcccCCCeEEEEEEe--CCHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSD--HVVQNGNSSLLSFTV--TDINSAVT  130 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~~~~~~~~~~~v--~dl~~~~~  130 (168)
                      .+|+|++|.|+|++++++||+++|||++......+..+..++..+.+......  .....+...+++|.+  +|++++++
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~~~~~d~~~~~~   82 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQ   82 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHHHHHH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEeccccccccccccceeecccccccCCCcCCccceeeeechHHHHHHHHH
Confidence            68999999999999999999999999999888888888887777666654322  222334445677776  78999999


Q ss_pred             HHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          131 KLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       131 ~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      +|+++|+++...+  .+.++.+||+|||||.|||+.+
T Consensus        83 ~l~~~Gv~~~~~~--~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          83 RLEQAGVTIWKQN--KSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHTTCCEEECC--CSSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHCCCeEeecC--CCCceEEEEECCCCCEEEEEEC
Confidence            9999999876433  3556889999999999999764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.85  E-value=1.4e-20  Score=128.95  Aligned_cols=110  Identities=16%  Similarity=0.191  Sum_probs=84.3

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe--CCH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV--TDI  125 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v--~dl  125 (168)
                      .+|+|+.|.|+|+++|++||+++|||++....+       ....+..++..+.+...+...   .+...+++|.+  +|+
T Consensus         3 ~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~f~v~~~dv   79 (130)
T d1r9ca_           3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA---ERSYNHIAFKIDDADF   79 (130)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS---SCCSCEEEEECCGGGH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc---ccceeeeeecccHHHH
Confidence            579999999999999999999999999988743       234455677778777654432   22334677766  579


Q ss_pred             HHHHHHHHHCCCeEeccce-eeCCeEEEEEECCCCCEEEEEee
Q 040429          126 NSAVTKLMALGAELDGSIK-YEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       126 ~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++++|+++|+++..++. ..+.++.+||.|||||+|||+..
T Consensus        80 ~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          80 DRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             HHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEEC
Confidence            9999999999999876544 44455889999999999999864

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=8.2e-21  Score=126.27  Aligned_cols=106  Identities=14%  Similarity=0.108  Sum_probs=82.3

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCe
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      +.+|.|+|+++|++||+++|||++....+.+..+..++....+....... .......++.|.++|+++++++++++|++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dvd~~~~~l~~~g~~   83 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREG-GSGTDVPDLSIEVDNFDEVHARILKAGLP   83 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECSSEEEEEEEEEEEEEEEEESSS-BTTBCCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecccceeEeccccccceeeeccccc-CCCCceeEEEEEecCHHHHHHHHHhhccc
Confidence            47899999999999999999999999888777776644333332221111 11223346899999999999999999999


Q ss_pred             EeccceeeCCe-EEEEEECCCCCEEEEE
Q 040429          139 LDGSIKYEIHG-KVAAMRCIDGHMLGLY  165 (168)
Q Consensus       139 ~~~~~~~~~~g-~~~~~~DPdGn~iel~  165 (168)
                      +..++...++| +.+|++|||||+|||+
T Consensus        84 ~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          84 IEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             cccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            88777765555 9999999999999985

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=2.8e-20  Score=128.25  Aligned_cols=111  Identities=20%  Similarity=0.173  Sum_probs=88.2

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCC-CeEEEEEEeCCHHHHHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNG-NSSLLSFTVTDINSAVTKLM  133 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~~~~~v~dl~~~~~~l~  133 (168)
                      .+|+||.|.|+|++++++||+++||+++..+.+.+..+..++..+.............+ ...++++.++|+++++++|+
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dl~~~~~~l~   82 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLR   82 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCSSSCEEEEEECHHHHHHHHHHHH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccceeeeecCCeEEEEeeeccccccccccccchhccccchHHHHHHHHH
Confidence            68999999999999999999999999999998888888888888887765443222222 22234455589999999999


Q ss_pred             HCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          134 ALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       134 ~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++...  ..+.++.+||+|||||.|||+..
T Consensus        83 ~~G~~~~~~--~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          83 AHGVREWKQ--NRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HTTCCEEEC--CCSSSCEEEEECTTCCEEEEESC
T ss_pred             HCCCcCccC--CCcceeEEEEECCCCCEEEEEEC
Confidence            999987543  23445789999999999999763

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.84  E-value=1.9e-20  Score=128.11  Aligned_cols=112  Identities=19%  Similarity=0.308  Sum_probs=85.9

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEe-CCeEEEEEeC-------CCCCcccCCCeEEEEEEeCC-
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQS-GPLKLALMQS-------PSDHVVQNGNSSLLSFTVTD-  124 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~-~~~~i~l~~~-------~~~~~~~~~~~~~~~~~v~d-  124 (168)
                      ||+|+.|.|+|+++|++||++ |||.+....  +.+..+.. +...+.+...       +....+..+...+++|.|.+ 
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~   80 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPDT   80 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCSEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEECSSH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccccceeeeccceeeeeecccccccccCCCCCCCccccceeEeeeeccc
Confidence            799999999999999999987 999887653  35555544 4455555432       11222233445679999977 


Q ss_pred             --HHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEeeC
Q 040429          125 --INSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       125 --l~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~~  168 (168)
                        +++++++|+++|+++..++...++| +.+||+|||||.|||++|.
T Consensus        81 ~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          81 ASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             hhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence              6678999999999998888876666 8999999999999999983

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.83  E-value=1.6e-19  Score=129.92  Aligned_cols=113  Identities=14%  Similarity=0.027  Sum_probs=85.3

Q ss_pred             ccccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC----CeEEEEEeCCCC-CcccCCCeEEEEEEeCC---
Q 040429           53 AAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG----PLKLALMQSPSD-HVVQNGNSSLLSFTVTD---  124 (168)
Q Consensus        53 ~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~----~~~i~l~~~~~~-~~~~~~~~~~~~~~v~d---  124 (168)
                      +..+|+||.|.|+|++++++||+++|||++....+.+..+...    ...+.+.....+ ..+..+...|++|.|+|   
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~~~~~   88 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAE   88 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSSEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHH
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCceEEEEeccCccceEEEeccccccccccCccccceEEEEeCChHH
Confidence            3468999999999999999999999999999988777766541    222333332222 23334556789999976   


Q ss_pred             HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          125 INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       125 l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++++++++.+.|+.+.+ +....+++.+||+|||||+|||+.
T Consensus        89 l~~~~~~l~~~G~~~~~-~~~~~~~~s~Yf~DPdG~~iEl~t  129 (170)
T d1zswa2          89 LAYWEEQVKQRGFHSSG-IIDRFYFKSLYFRESNGILFEIAT  129 (170)
T ss_dssp             HHHHHHHHHHTTCCCCC-CEECSSEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHhcCCCccc-cccCCCEEEEEEECCCCcEEEEEE
Confidence            66778899999999754 334445688999999999999975

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.83  E-value=8.8e-20  Score=127.19  Aligned_cols=112  Identities=21%  Similarity=0.295  Sum_probs=84.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----------------cEEEEEe--CCeEEEEEeCC---CC-----
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----------------RWAELQS--GPLKLALMQSP---SD-----  107 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----------------~~~~~~~--~~~~i~l~~~~---~~-----  107 (168)
                      .+++|+.|.|+|+++|++||++ |||++.....                 ..+.+..  +...+.+.+..   ..     
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~   86 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRT   86 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTT
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccc
Confidence            6899999999999999999999 9999886521                 1333333  34556554321   11     


Q ss_pred             CcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          108 HVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       108 ~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .........|++|.|+|+++++++|+++|+.+.+++....++ +.+|++|||||.|||+|.
T Consensus        87 ~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          87 APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             cCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            011122356899999999999999999999998777655555 789999999999999985

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=2.2e-19  Score=122.35  Aligned_cols=113  Identities=14%  Similarity=0.117  Sum_probs=81.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cE--EEEEe----CCeEEEEEe-CCCCCcccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RW--AELQS----GPLKLALMQ-SPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~--~~~~~----~~~~i~l~~-~~~~~~~~~~~~~~~~~~v~  123 (168)
                      +|+.|+.|.|+|+++|++||+++|||++....+    .+  .....    ......... .............+.++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            478999999999999999999999999887532    12  21111    111111111 11112222334567999999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeC-Ce-EEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEI-HG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +++...++++.+|..+...+...+ ++ +++||+|||||+|||+|+
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~  126 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  126 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEEC
Confidence            999999999999999887666444 33 788999999999999986

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.83  E-value=2.6e-19  Score=124.66  Aligned_cols=113  Identities=11%  Similarity=0.082  Sum_probs=84.6

Q ss_pred             cccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEE--EEe----CCeEEEEEeCCCCCccc--CCCeEEEEE
Q 040429           54 AASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAE--LQS----GPLKLALMQSPSDHVVQ--NGNSSLLSF  120 (168)
Q Consensus        54 ~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~--~~~----~~~~i~l~~~~~~~~~~--~~~~~~~~~  120 (168)
                      ..+|+||.|.|+|+++|++||+++|||++.....     ....  +..    .+..+.+...+......  .+...|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            3689999999999999999999999999886531     1221  211    23556666554432222  334678999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          121 TVTD---INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~d---l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      .++|   ++++.++|++.|+.+.++ ...++++.+||+|||||.|||+++
T Consensus        84 ~v~~~~~l~~~~~~l~~~gv~~~~~-~~~~~~~~~yf~DPdG~~iEl~~~  132 (144)
T d1zswa1          84 LVPSEDSLHYWKERFEKFDVKHSEM-TTYANRPALQFEDAEGLRLVLLVS  132 (144)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEECCS-EEETTEEEEEEECTTCCEEEEEEC
T ss_pred             ecCCchhHHHHhhhhhccceeeeCc-cccCCeEEEEEECCCCCEEEEEEe
Confidence            9988   677788999999987554 445667899999999999999886

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.83  E-value=3.2e-20  Score=132.37  Aligned_cols=111  Identities=18%  Similarity=0.233  Sum_probs=81.1

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEE-Ee--CCeEEEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAEL-QS--GPLKLALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~-~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      |.+.+++||.|.|+|+++|++||+++|||++.+...     ....+ ..  ......+...+.     .+...|+++.+.
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~h~~~~~~   75 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPE-----KGRLHHVSFHLE   75 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSS-----SSEEEEEEEECS
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccCC-----CCccceeEEEEe
Confidence            667899999999999999999999999999987531     11222 11  233333333332     344567899887


Q ss_pred             CHH---HHHHHHHHCCCeEeccce-eeCCe-EEEEEECCCCCEEEEEee
Q 040429          124 DIN---SAVTKLMALGAELDGSIK-YEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~---~~~~~l~~~G~~~~~~~~-~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      +++   +++++|++.|+.+..++. ++.++ +++||+|||||.|||+..
T Consensus        76 ~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          76 TWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             eehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            766   667899999998875554 55544 899999999999999863

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.83  E-value=3.2e-20  Score=128.01  Aligned_cols=106  Identities=14%  Similarity=0.100  Sum_probs=84.6

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      .+|+|+.|.|+|+++|++||+++|||++....+.++.+..+  ++.+.+...+.      ....+++|.+.   |++++.
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~l~l~~~~~------~~~~h~~f~v~~~~dl~~~~   76 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEV------DDLAFAGYEVADAAGLAQMA   76 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTT------CEEEEEEEEESSHHHHHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCCcceEEeecCCceEEEEecCCC------CCceEEEEEEccHHHHHHHH
Confidence            57999999999999999999999999999988888888764  56787776543      23456889885   567788


Q ss_pred             HHHHHCCCeEeccce----eeCCeEEEEEECCCCCEEEEEe
Q 040429          130 TKLMALGAELDGSIK----YEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~----~~~~g~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++|+++...+.    .....+++||+|||||.|||+.
T Consensus        77 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          77 DKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             HHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            999999998764332    1223388999999999999974

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.82  E-value=3.4e-19  Score=120.41  Aligned_cols=104  Identities=16%  Similarity=0.202  Sum_probs=86.4

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEe
Q 040429           61 LQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELD  140 (168)
Q Consensus        61 ~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~  140 (168)
                      +|+|+|+++|++||+++|||++....+.++.+..++..+.+...+......   ..++.+.+.|+++++++++++++...
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~   86 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVAD---NTSAWIEVTDPDALHEEWARAVSTDY   86 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSCHHHHT---TCEEEEEESCHHHHHHHHHTTSCSCT
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCCceeEeeeeeeeeeeeccccccccc---eeEEEEeechhHHHHHHHHhhcceEE
Confidence            599999999999999999999999988999999999999998866542222   23588999999999999999986643


Q ss_pred             --------ccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          141 --------GSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       141 --------~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                              .+....++++.+||+|||||+|||...
T Consensus        87 ~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          87 ADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             eeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence                    233456677999999999999999753

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.82  E-value=7.4e-19  Score=118.75  Aligned_cols=104  Identities=21%  Similarity=0.290  Sum_probs=85.6

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEe
Q 040429           61 LQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAELD  140 (168)
Q Consensus        61 ~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~  140 (168)
                      +|+|+|+++|++||++ |||++....+.++.+..+...+.+...+......  ...++.+.++|++++++.++++|+.+.
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~   83 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLA--SWFSCCLRLDDLAEFYRQCKSVGIQET   83 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECSSEEEEEETTEEEEEEECTTCCGGG--CCCEEEEEESCHHHHHHHHHHTTCCBC
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecCceeeeecceeccccccccccccCC--CCcEEEEEECCHHHHHHHHhhhhhhhc
Confidence            5999999999999998 9999999888999998888888888766443222  233588999999999999999988764


Q ss_pred             -------ccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          141 -------GSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       141 -------~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                             .++...++| +.+||+|||||+|||.|.
T Consensus        84 ~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          84 SSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             SSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEEC
T ss_pred             cccccccccceecCCCcEEEEEECCCCCEEEEEEc
Confidence                   234444455 999999999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-19  Score=130.38  Aligned_cols=120  Identities=14%  Similarity=0.074  Sum_probs=86.0

Q ss_pred             ccccccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----c-EEEEEe-C--------------------CeEEEEE
Q 040429           49 RRVMAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----R-WAELQS-G--------------------PLKLALM  102 (168)
Q Consensus        49 ~~~m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~-~~~~~~-~--------------------~~~i~l~  102 (168)
                      .+.+...+++|+.|.|+|+++|++||+++|||++.....    . ...+.. +                    .....+.
T Consensus        16 ~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (176)
T d1qipa_          16 DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTH   95 (176)
T ss_dssp             CGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEE
T ss_pred             CCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEE
Confidence            344445789999999999999999999999999876421    1 222211 1                    1112222


Q ss_pred             eCCC----C-----CcccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEeeC
Q 040429          103 QSPS----D-----HVVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA  168 (168)
Q Consensus       103 ~~~~----~-----~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~~  168 (168)
                      ....    .     ......+..++++.++|+++++++|+++|+++..++..+.....+||+|||||.|||+|++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          96 NWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             ETTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             eeccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            1111    0     0111234568999999999999999999999998887776667788999999999999974

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.81  E-value=1.3e-19  Score=125.09  Aligned_cols=106  Identities=13%  Similarity=0.132  Sum_probs=84.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeC--CeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSG--PLKLALMQSPSDHVVQNGNSSLLSFTVT---DINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~~~  129 (168)
                      .+|+||.|.|+|++++++||+++|||++.....+.+.+..+  ++.+.+...+.      ....+++|.+.   |++++.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~l~~~~~~~------~~~~h~~f~v~~~~dl~~~~   76 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQPGEL------DDLAYAGLEVDDAAALERMA   76 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTT------CEEEEEEEECSSHHHHHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceeccccceeeeeeeecceeeeeeccCC------CCceEEEEEeccHHHHHHHH
Confidence            68999999999999999999999999999988877777764  55677776542      23457999984   577788


Q ss_pred             HHHHHCCCeEeccce-e---eCCeEEEEEECCCCCEEEEEe
Q 040429          130 TKLMALGAELDGSIK-Y---EIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       130 ~~l~~~G~~~~~~~~-~---~~~g~~~~~~DPdGn~iel~e  166 (168)
                      +++.++|+.+...+. .   ...+..+||+|||||.|||+-
T Consensus        77 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          77 DKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             HHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            899999999764332 1   123478999999999999973

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=2.7e-19  Score=125.31  Aligned_cols=107  Identities=17%  Similarity=0.215  Sum_probs=84.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEe----CCeEEEEEeCCCCCcccCCCeEEEEEEeC---CHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQS----GPLKLALMQSPSDHVVQNGNSSLLSFTVT---DINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~v~---dl~~  127 (168)
                      .+|+||.|.|+|++++++||+++|||++....+.+..+..    ..+.+.+...+.      ....|+++.+.   |+++
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~h~~~~~~~~~dl~~   88 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPI------AAVAAFAYRVKSPAEVDA   88 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSS------CEEEEEEEEESSHHHHHH
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCCceeeecccccccceeeccccCC------CCCceeeEeeccchhHHH
Confidence            6899999999999999999999999999998888777654    234444444332      23446888885   6888


Q ss_pred             HHHHHHHCCCeEeccc-eeeCC-eEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSI-KYEIH-GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~-~~~~~-g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++|+++...+ ...++ ++++||+|||||.|||+.+
T Consensus        89 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          89 AEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             HHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            8999999999986443 34444 4889999999999999874

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=2.9e-19  Score=123.72  Aligned_cols=109  Identities=18%  Similarity=0.121  Sum_probs=79.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEec---cc--EEEEEe--CCeEEEEEeCCCC-CcccCCCeEEEEEEeCC---HHH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCT---LR--WAELQS--GPLKLALMQSPSD-HVVQNGNSSLLSFTVTD---INS  127 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~---~~--~~~~~~--~~~~i~l~~~~~~-~~~~~~~~~~~~~~v~d---l~~  127 (168)
                      .|.++|+|+++|++||+++|||++....   ..  ++.+..  ....+.+...+.. ....++...|++|.|++   +++
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv~~   91 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAA   91 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHHHH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccccccccccccccCceEEEEeCCHHHHHH
Confidence            3556778999999999999999987653   22  333443  3455555554433 22234445689998866   777


Q ss_pred             HHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++++|+++|+++..++...++++.+||+|||||+|||+.+
T Consensus        92 ~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~  131 (137)
T d1twua_          92 ITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNS  131 (137)
T ss_dssp             HHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESS
T ss_pred             HHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcC
Confidence            8889999999988766545555789999999999999875

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.79  E-value=6.6e-19  Score=124.97  Aligned_cols=107  Identities=16%  Similarity=0.052  Sum_probs=83.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--------cEEEE---EeCCeEEEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--------RWAEL---QSGPLKLALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--------~~~~~---~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      ..|+|+.|.|+|++++++||+++|||+++....        ....+   ...++.+++...+.     .+...|++|.|+
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~~-----~~gl~Hiaf~v~   83 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI-----PKRIHHFMLQAN   83 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC-----SSSEEEEEEEBS
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCCC-----CCceeEEEEECC
Confidence            689999999999999999999999999887521        12222   22567777765543     334678999997


Q ss_pred             CHHH---HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCC-EEEEEe
Q 040429          124 DINS---AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGH-MLGLYE  166 (168)
Q Consensus       124 dl~~---~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn-~iel~e  166 (168)
                      ++++   .+++|+++|+.+.++.++..+. .++|++||||| .+|+..
T Consensus        84 ~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          84 TIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             SHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             CHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            7666   5678999999877888888755 89999999998 589864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.79  E-value=4.3e-18  Score=114.20  Aligned_cols=105  Identities=14%  Similarity=0.149  Sum_probs=85.0

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecccEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHHHHHHHCCCe
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      +.+|.|+|+++|++||+++|||++....+.++.+..++..+.+.........   ......+.+++++.+.+.+.+++..
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   83 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVP---DNTQAWVWVRGLDELYAEWSEVVST   83 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSCTTTG---GGCEEEEEEECHHHHHHHHTTTSBS
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCCeeEEecccceeeccccccccCC---CCceEEEeeccHHHHHHHHHHhhhH
Confidence            3459999999999999999999999998889999999999988876554322   2345888899999998877655543


Q ss_pred             --------EeccceeeCCeEEEEEECCCCCEEEEEe
Q 040429          139 --------LDGSIKYEIHGKVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       139 --------~~~~~~~~~~g~~~~~~DPdGn~iel~e  166 (168)
                              ...++...++|+.+||+|||||+|||++
T Consensus        84 ~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          84 NFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             CTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence                    3345566778899999999999999986

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=7.5e-20  Score=127.56  Aligned_cols=110  Identities=15%  Similarity=0.096  Sum_probs=77.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecccEEEE--Ee---CCeEEEEEeCCCCCcccCCCeEEEEEEeCCHHHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAEL--QS---GPLKLALMQSPSDHVVQNGNSSLLSFTVTDINSAV  129 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~~~~~~--~~---~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~~~~  129 (168)
                      ++|+||.|.|+|+++|++||+++|||++.........+  ..   ..+.+.+...+...   .....+.++.++|++++.
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dl~~~~   82 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPG---MDFMGFKVVDEDALRQLE   82 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSCEEEECTTCCBSCSEEEEECSSCE---EEEEEEEESCHHHHHHHH
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCccceecccccceeeccccccCccc---ceeeeeeehhHHHHHHHH
Confidence            68999999999999999999999999999875432222  11   23444444433221   111223444557899999


Q ss_pred             HHHHHCCCeEec-cceeeCC-eEEEEEECCCCCEEEEEee
Q 040429          130 TKLMALGAELDG-SIKYEIH-GKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       130 ~~l~~~G~~~~~-~~~~~~~-g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|+++|+.+.. +....++ ++++||+|||||.|||+..
T Consensus        83 ~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          83 RDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             HHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            999999998753 3334443 4899999999999999863

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=3.1e-18  Score=123.73  Aligned_cols=106  Identities=19%  Similarity=0.224  Sum_probs=79.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEEE---eCCeEEEEEeCCCCCcccCCCeEEEEEEeCCHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAELQ---SGPLKLALMQSPSDHVVQNGNSSLLSFTVTDIN  126 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl~  126 (168)
                      .||+||+|.|+|+++|++|| ++|||++++...     ....+.   ..++.+++...+.      +..+|++|.+.+++
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~H~~f~~~~~~   76 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNG------PRMHHVAFATHEKH   76 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSB------SEEEEEEEECSSHH
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecccccC------CCccceeEEeccch
Confidence            68999999999999999999 679999987521     122232   2567777776553      23567999997666


Q ss_pred             HH---HHHHHHCCCeE---eccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          127 SA---VTKLMALGAEL---DGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       127 ~~---~~~l~~~G~~~---~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++   .++|.++|+..   .++.+++.++ .++||+|||||+|||+..
T Consensus        77 ~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          77 NIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             HHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             hHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            55   45788889854   2455566655 899999999999999863

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=2.8e-17  Score=111.89  Aligned_cols=110  Identities=15%  Similarity=0.138  Sum_probs=76.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc----cEEEEE--eC----CeE-EEEEeCCCCCcccCCCeEEEEEEeC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL----RWAELQ--SG----PLK-LALMQSPSDHVVQNGNSSLLSFTVT  123 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~----~~~~~~--~~----~~~-i~l~~~~~~~~~~~~~~~~~~~~v~  123 (168)
                      .|+.|+.|.|+|+++|++||+++|||++....+    .+..+.  ..    ... ..................+.++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            489999999999999999999999999987632    222222  11    111 1111111112222334456888999


Q ss_pred             CHHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          124 DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       124 dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++.+..+.+...++.+..+   +.+.+++||+|||||+|||++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYE---DESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEE---CSSSSEEEEECTTSCEEEEEEH
T ss_pred             hHHHHHHHHHHcCCceeeC---CCCcEEEEEECCCCCEEEEEEC
Confidence            9999999999988876432   2333889999999999999974

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.75  E-value=7.4e-18  Score=116.45  Aligned_cols=112  Identities=14%  Similarity=0.166  Sum_probs=84.9

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc-----cEEEE-------EeCCeEEEEEeCCCCC---------cccCC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL-----RWAEL-------QSGPLKLALMQSPSDH---------VVQNG  113 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-----~~~~~-------~~~~~~i~l~~~~~~~---------~~~~~  113 (168)
                      .+|+||.|.|+|+++|++||+++|||+......     ....+       ..+...+.+.+.....         .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            799999999999999999999999999876532     11111       1256778877643221         11233


Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEec-cceeeCCeEEEEE---ECCCCCEEEEEe
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDG-SIKYEIHGKVAAM---RCIDGHMLGLYE  166 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~-~~~~~~~g~~~~~---~DPdGn~iel~e  166 (168)
                      +..|++|.|+|+++.+++|+++|+++.. ++..+.+|+.++|   .||+|++|||+|
T Consensus        86 g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e  142 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQ  142 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEE
T ss_pred             cceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEE
Confidence            4678999999999999999999999864 4567777744444   688999999998

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=8.7e-17  Score=110.64  Aligned_cols=108  Identities=18%  Similarity=0.101  Sum_probs=82.0

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEecc-------------cEEEEEeCCeEEEEEeCCCC----CcccCCCeEEEEEE
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCTL-------------RWAELQSGPLKLALMQSPSD----HVVQNGNSSLLSFT  121 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~~-------------~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~  121 (168)
                      ++.|.++|+++|++||+++||+++.....             ..+.+..++..+.+......    .....+...++++.
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   89 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLG   89 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCCcceEEEEe
Confidence            35566779999999999999999865421             35677778888877654211    12222334578999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          122 VTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       122 v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ++|+++.+.+++++|+++..++...++| +.++|+||+||.|+|.|
T Consensus        90 v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          90 TKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             ecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            9999999999999999999888755555 89999999999999976

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.69  E-value=8.8e-16  Score=108.94  Aligned_cols=113  Identities=16%  Similarity=0.145  Sum_probs=89.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc--------cEEEEEeCCeEEEEEeCCCCC-----------cccCCCe
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL--------RWAELQSGPLKLALMQSPSDH-----------VVQNGNS  115 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~--------~~~~~~~~~~~i~l~~~~~~~-----------~~~~~~~  115 (168)
                      .+++||.|.|+|+++|++||+++|||++.....        .+..+..+...+.|.......           ..+....
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~   85 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGV   85 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCce
Confidence            689999999999999999999999999887531        244456688888887743321           1123356


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEeccce--eeCCe--EEEEEECCCCCEEEEEee
Q 040429          116 SLLSFTVTDINSAVTKLMALGAELDGSIK--YEIHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       116 ~~~~~~v~dl~~~~~~l~~~G~~~~~~~~--~~~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      .|++|.|+|+++.+++|+++|+++..++.  ....|  .++++.+|+|..++|+|.
T Consensus        86 ~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier  141 (163)
T d1t47a1          86 VDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  141 (163)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             EEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEec
Confidence            78999999999999999999999876665  33455  678999999999999885

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.1e-15  Score=106.70  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=87.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------c--EEEEEeCCeEEEEEeCCCCC--------cccCCCeEEE
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------R--WAELQSGPLKLALMQSPSDH--------VVQNGNSSLL  118 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~--~~~~~~~~~~i~l~~~~~~~--------~~~~~~~~~~  118 (168)
                      .+++||.|.|+|+++|++||+++|||++.....      .  +..+..+...+.+.......        ..+.....|+
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hi   89 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDI   89 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEE
Confidence            679999999999999999999999999876531      2  34455688888887643321        1123456789


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccce--eeCCe--EEEEEECCCCCEEEEEee
Q 040429          119 SFTVTDINSAVTKLMALGAELDGSIK--YEIHG--KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       119 ~~~v~dl~~~~~~l~~~G~~~~~~~~--~~~~g--~~~~~~DPdGn~iel~e~  167 (168)
                      +|.|+|+++.+++|+++|+++..+|.  ...+|  +++++..|+|..++|+|.
T Consensus        90 af~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier  142 (149)
T d1sqia1          90 AFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEK  142 (149)
T ss_dssp             EEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             EEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEe
Confidence            99999999999999999999887665  23455  467788888888899985

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=4.2e-15  Score=105.69  Aligned_cols=116  Identities=20%  Similarity=0.155  Sum_probs=89.0

Q ss_pred             cccccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEE--EEEeCCeEEEEEeCCCCC-------------c-
Q 040429           52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWA--ELQSGPLKLALMQSPSDH-------------V-  109 (168)
Q Consensus        52 m~~~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~--~~~~~~~~i~l~~~~~~~-------------~-  109 (168)
                      |...+++||.|.|+|+++|++||+++|||++..+..      ...  .+..+...+.+.......             . 
T Consensus         8 ~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   87 (167)
T d1sqda1           8 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIP   87 (167)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccc
Confidence            344789999999999999999999999999887631      222  244466666665432110             0 


Q ss_pred             ------------ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          110 ------------VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       110 ------------~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                                  .+..+..|++|.|+|+++.+++|+++|+++..+|....++ +.+++..+.+...+|+|.
T Consensus        88 ~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r  158 (167)
T d1sqda1          88 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSY  158 (167)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEE
T ss_pred             cCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEec
Confidence                        0112467899999999999999999999998888866666 888999999999999986

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.58  E-value=1.8e-14  Score=103.03  Aligned_cols=113  Identities=19%  Similarity=0.137  Sum_probs=85.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEE--EEeCCeEEEEEeCCCCC------------------
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAE--LQSGPLKLALMQSPSDH------------------  108 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~--~~~~~~~i~l~~~~~~~------------------  108 (168)
                      .+++||.|.|+|+++|++||+++|||++.....      .+..  +..+...+.+.......                  
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARR   91 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhh
Confidence            689999999999999999999999999987531      2333  34466666664322110                  


Q ss_pred             --cccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          109 --VVQNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       109 --~~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                        ..+..+..|++|.|+|+++.+++|+++|+++..+|....+| +.+++.-|.+..++|+|.
T Consensus        92 ~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~  153 (172)
T d1sp8a1          92 FAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY  153 (172)
T ss_dssp             HHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEEC
T ss_pred             hhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEec
Confidence              00123456899999999999999999999998777765556 788888887778899985

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.46  E-value=4.5e-12  Score=86.97  Aligned_cols=106  Identities=12%  Similarity=0.056  Sum_probs=78.8

Q ss_pred             EEeC-CHHHHHHHHHhccCCEEEEec---c---------------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEe
Q 040429           62 QLHK-DVPKAARFYSEGLDFTVNVCT---L---------------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTV  122 (168)
Q Consensus        62 l~v~-D~~~a~~FY~~vLGf~~~~~~---~---------------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v  122 (168)
                      |... |.++|++||+++||+++....   +               ..+.+..++..+.+...........+....+++.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~~~~~~~~~~~l~~   87 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKGCSISLNV   87 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSCCCCCCSEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcccccCCCcEEEEEEc
Confidence            3444 999999999999999987642   1               13567778878777665433333344455688888


Q ss_pred             CCHHH--HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          123 TDINS--AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       123 ~dl~~--~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      ++.+.  .+.++.++|+++..++...++| ++.+|+||+|+.|+|..+
T Consensus        88 ~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          88 DSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             SSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             CCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            76554  4667788999999998877777 889999999999999754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.36  E-value=2.5e-12  Score=90.07  Aligned_cols=111  Identities=18%  Similarity=0.186  Sum_probs=82.1

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec--ccEEEEEeCCeEEEEEeCCCCC-----cccCCCeEEEEEEeCCHHH
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT--LRWAELQSGPLKLALMQSPSDH-----VVQNGNSSLLSFTVTDINS  127 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~--~~~~~~~~~~~~i~l~~~~~~~-----~~~~~~~~~~~~~v~dl~~  127 (168)
                      ..|+||.+.|+|++++.+||++ |||+...+.  .....+..+...+.+...+...     ..+.....+++|.|+|+++
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~~~l~~~G~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf~V~D~~~   86 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRVKDSQK   86 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEESCHHH
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceEEEEEecCcEEEEecCCCCCHhHhHHhhCCCceEEEEEEeCCHHH
Confidence            5799999999999999999998 999988763  3444456677777765544321     1133456789999999999


Q ss_pred             HHHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          128 AVTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       128 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .+++|.++|+++..++.. ++. ...++++|+|.++.|+++
T Consensus        87 a~~~a~~~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          87 AYNRALELGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             HHHHHHHTTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECC
T ss_pred             HHHHHHHCCCEEcccCCC-CCceeeeEEEcCCCCEEEEECc
Confidence            999999999997654432 222 455677777777777764

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.24  E-value=3.6e-10  Score=77.24  Aligned_cols=108  Identities=11%  Similarity=-0.025  Sum_probs=76.3

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEec-----------c--cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEEeCCH
Q 040429           59 WILQLHKDVPKAARFYSEGLDFTVNVCT-----------L--RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFTVTDI  125 (168)
Q Consensus        59 hv~l~v~D~~~a~~FY~~vLGf~~~~~~-----------~--~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~v~dl  125 (168)
                      ++.+.-.|.++|++||+++||.......           .  ..+.+..++..+.+...........+....+++.+++.
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~~~~~~~s~~l~~~~~   88 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFVDCESN   88 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSCCCCTTEEEEEECCCH
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCCCCCCceEEEEEeccH
Confidence            3344456999999999999998754321           1  25677889999988765433223334445677777775


Q ss_pred             HHH--HHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEe
Q 040429          126 NSA--VTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYE  166 (168)
Q Consensus       126 ~~~--~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e  166 (168)
                      ++.  +.+..++|.++..|+...++| ++..++||.|+.|.|.-
T Consensus        89 d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          89 AQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEEc
Confidence            554  445567788888888866666 89999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.97  E-value=1.5e-08  Score=68.57  Aligned_cols=107  Identities=11%  Similarity=-0.006  Sum_probs=72.1

Q ss_pred             ccccEEEEEeC-CHHHHHHHHHhccCCEEE-Eec----------c--cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEE
Q 040429           55 ASFRWILQLHK-DVPKAARFYSEGLDFTVN-VCT----------L--RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSF  120 (168)
Q Consensus        55 ~~i~hv~l~v~-D~~~a~~FY~~vLGf~~~-~~~----------~--~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~  120 (168)
                      ++|. -.|... |.++|++||+++||-..+ ...          +  ..+.+..++..+.+.......    +...++++
T Consensus         4 ~~i~-Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~----~~~~s~~v   78 (129)
T d1tsja_           4 PKIT-TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGT----ELPISLFV   78 (129)
T ss_dssp             CSEE-EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC-----------CCCEEE
T ss_pred             CcEE-EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCC----CCCEEEEe
Confidence            3444 345555 999999999999976433 321          1  356678899999887654321    11234777


Q ss_pred             EeCCHHHH---HHHHHHCCCeEeccceeeCCe-EEEEEECCCCCEEEEEee
Q 040429          121 TVTDINSA---VTKLMALGAELDGSIKYEIHG-KVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       121 ~v~dl~~~---~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdGn~iel~e~  167 (168)
                      .+++.+++   +++| +.|.++..|+...++| ++..+.||.|+.|.|..|
T Consensus        79 ~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          79 TVKDTIEMERLFNGL-KDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             ECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             ccCCHHHHHHHHHHh-ccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            88777664   4455 5677888888876767 788999999999999876

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.90  E-value=2.3e-09  Score=78.20  Aligned_cols=88  Identities=13%  Similarity=0.147  Sum_probs=62.8

Q ss_pred             ccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc----cE----EEEEe--CCeEEEEEeCCCCCc---------ccCC
Q 040429           55 ASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL----RW----AELQS--GPLKLALMQSPSDHV---------VQNG  113 (168)
Q Consensus        55 ~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~----~~----~~~~~--~~~~i~l~~~~~~~~---------~~~~  113 (168)
                      .+|+||.+.|+  |+++++.||+++|||+.....+    ..    .....  +...+.+...+....         ...+
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~   83 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGE   83 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSS
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCC
Confidence            47999999998  9999999999999999887531    11    11111  344444443332211         1223


Q ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCeEecc
Q 040429          114 NSSLLSFTVTDINSAVTKLMALGAELDGS  142 (168)
Q Consensus       114 ~~~~~~~~v~dl~~~~~~l~~~G~~~~~~  142 (168)
                      +..|++|.|+||.+..++|+++|+++...
T Consensus        84 GiqHIAf~vdDI~aav~~L~~~Gv~fL~~  112 (203)
T d1cjxa2          84 GIQHVAFLTDDLVKTWDALKKIGMRFMTA  112 (203)
T ss_dssp             BCCEEEEEESCHHHHHHHHHHTTCCBCCC
T ss_pred             CCceEEEEeCCHHHHHHHHHhcCCccccC
Confidence            56799999999999999999999998643

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.86  E-value=5.6e-09  Score=77.16  Aligned_cols=84  Identities=13%  Similarity=0.100  Sum_probs=58.7

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cE-----EEEEe--CCeEEEEEeCCCC---Cc--------c
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RW-----AELQS--GPLKLALMQSPSD---HV--------V  110 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~-----~~~~~--~~~~i~l~~~~~~---~~--------~  110 (168)
                      .+|+||.+.|+|++++++||+++|||+......      ..     ..+..  +...+.+.....+   ..        .
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~   87 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHH   87 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhc
Confidence            589999999999999999999999998765421      11     11111  3455666543221   11        1


Q ss_pred             cCCCeEEEEEEeCCHHHHHHHHHHCCCe
Q 040429          111 QNGNSSLLSFTVTDINSAVTKLMALGAE  138 (168)
Q Consensus       111 ~~~~~~~~~~~v~dl~~~~~~l~~~G~~  138 (168)
                      ...+..|++|.|+||.+.+++|+++|+.
T Consensus        88 ~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          88 GGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             TSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             cCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence            1235689999999999999999987643

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.72  E-value=3.7e-08  Score=71.33  Aligned_cols=89  Identities=11%  Similarity=0.112  Sum_probs=64.3

Q ss_pred             ccccEEEEEeC--CHHHHHHHHHhccCCEEEEecc--------cEE---EEEe--CCeEEEEEeCCCCC----------c
Q 040429           55 ASFRWILQLHK--DVPKAARFYSEGLDFTVNVCTL--------RWA---ELQS--GPLKLALMQSPSDH----------V  109 (168)
Q Consensus        55 ~~i~hv~l~v~--D~~~a~~FY~~vLGf~~~~~~~--------~~~---~~~~--~~~~i~l~~~~~~~----------~  109 (168)
                      .+|+||.+.|+  ++++++.||+++|||+......        ...   .+..  +...+.+.......          .
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~   84 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEF   84 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhh
Confidence            57999999999  9999999999999999875421        111   1111  35566665422111          1


Q ss_pred             ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          110 VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       110 ~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                      ...++..|++|.++||.+..++|+++|+.+...|
T Consensus        85 ~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          85 YGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            1234678999999999999999999999987555

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=6.6e-08  Score=70.57  Aligned_cols=89  Identities=13%  Similarity=0.178  Sum_probs=63.3

Q ss_pred             ccccEEEEEeCC--HHHHHHHHHhccCCEEEEecc------c-----EEEEEe--CCeEEEEEeCCCCC--c--------
Q 040429           55 ASFRWILQLHKD--VPKAARFYSEGLDFTVNVCTL------R-----WAELQS--GPLKLALMQSPSDH--V--------  109 (168)
Q Consensus        55 ~~i~hv~l~v~D--~~~a~~FY~~vLGf~~~~~~~------~-----~~~~~~--~~~~i~l~~~~~~~--~--------  109 (168)
                      .+|+||.+.|++  ++++++||+++|||+.....+      .     ...+..  +...+.++......  .        
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~~  102 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDY  102 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHHH
T ss_pred             ceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHhh
Confidence            579999999998  999999999999998765321      1     111122  45566666532211  1        


Q ss_pred             ccCCCeEEEEEEeCCHHHHHHHHHHCCCeEeccc
Q 040429          110 VQNGNSSLLSFTVTDINSAVTKLMALGAELDGSI  143 (168)
Q Consensus       110 ~~~~~~~~~~~~v~dl~~~~~~l~~~G~~~~~~~  143 (168)
                      ...++..|++|.++||.+..++|+++|+.+...|
T Consensus       103 ~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2         103 NGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            1233567999999999999999999999987554

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.45  E-value=3.8e-07  Score=67.32  Aligned_cols=83  Identities=10%  Similarity=0.016  Sum_probs=59.0

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEE-----Ee--CCeEEEEEeCCCC----C-------cc
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAEL-----QS--GPLKLALMQSPSD----H-------VV  110 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~-----~~--~~~~i~l~~~~~~----~-------~~  110 (168)
                      .+|+||.+.|+|++++.+||.++||+.......      .+..+     ..  +...+.+.....+    +       ..
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~~  100 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHN  100 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhhc
Confidence            579999999999999999999999998776532      11111     11  4456666643211    1       11


Q ss_pred             cCCCeEEEEEEeCCHHHHHHHHHHCCC
Q 040429          111 QNGNSSLLSFTVTDINSAVTKLMALGA  137 (168)
Q Consensus       111 ~~~~~~~~~~~v~dl~~~~~~l~~~G~  137 (168)
                      ..++..|++|.|+||.+..++|+++|+
T Consensus       101 ~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2         101 EGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             TSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             cCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence            234678999999999999999998654

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.85  E-value=0.00059  Score=46.77  Aligned_cols=101  Identities=14%  Similarity=0.072  Sum_probs=68.2

Q ss_pred             cccEEEEEeCCHHHHHHHHHhccCC-EEEEec-------c------cEEEEEeCCeEEEEEeCCCCCcccCCCeEEEEEE
Q 040429           56 SFRWILQLHKDVPKAARFYSEGLDF-TVNVCT-------L------RWAELQSGPLKLALMQSPSDHVVQNGNSSLLSFT  121 (168)
Q Consensus        56 ~i~hv~l~v~D~~~a~~FY~~vLGf-~~~~~~-------~------~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~  121 (168)
                      ||.-+.++-.|-++|.+||.++||- .+....       +      ..+.+..++..+.+...+..  ...+...++++.
T Consensus         2 ~~t~~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~~--~~~~~~~sl~l~   79 (156)
T d1u69a_           2 KNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA--FRHSEAFSFQVA   79 (156)
T ss_dssp             CEEEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT--CCCCTTEEEEEE
T ss_pred             CCcEeeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCCC--CCCCCCeEEEEe
Confidence            5666788889999999999999954 343321       0      35667778888877765422  123344568888


Q ss_pred             eCC---HHHHHHHHHHCCCeEeccceeeCCeEEEEEECCCCCEEEEEee
Q 040429          122 VTD---INSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEP  167 (168)
Q Consensus       122 v~d---l~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdGn~iel~e~  167 (168)
                      ++|   +++++++|.+.|-. .     .+.|   .+.|+.|..|.|.-+
T Consensus        80 ~d~~eE~d~~f~~LsegG~~-~-----~~~G---~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          80 TDDQAETDRLWNAIVDNGGE-E-----SACG---WCRDKWGISWQITPR  119 (156)
T ss_dssp             ESSHHHHHHHHHHHHHTTCE-E-----CSTT---EEECTTSCEEEEEEH
T ss_pred             cCCHHHHHHHHHHHhccCCC-C-----CCCe---EEECCCCCEEEeChH
Confidence            876   55567777765532 2     2234   499999999999743

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=83.15  E-value=2.7  Score=27.54  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=40.5

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEecc------cEEEEEe-CCeEEEEEeCCCC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCTL------RWAELQS-GPLKLALMQSPSD  107 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~~------~~~~~~~-~~~~i~l~~~~~~  107 (168)
                      ..+.|+.+.|+|++++.+-..+ .|.++.....      .++.+.. ++..+.|++.++.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            5789999999999999999998 9999776531      2444433 7888888887654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.34  E-value=3.2  Score=26.77  Aligned_cols=51  Identities=14%  Similarity=0.008  Sum_probs=37.4

Q ss_pred             ccccEEEEEeCCHHHHHHHHHhccCCEEEEec----c--cEEEEE-eCCeEEEEEeCCC
Q 040429           55 ASFRWILQLHKDVPKAARFYSEGLDFTVNVCT----L--RWAELQ-SGPLKLALMQSPS  106 (168)
Q Consensus        55 ~~i~hv~l~v~D~~~a~~FY~~vLGf~~~~~~----~--~~~~~~-~~~~~i~l~~~~~  106 (168)
                      ..+.|+.+.|.|++++.+...+ .|.++....    +  .++.+. .|+..+.|.+..+
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence            5799999999999999999999 899877652    1  223332 3677776766543