Citrus Sinensis ID: 040524


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRCPPRASSSYSSDPVSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEcccccccccccccHHHHcccccccccEEEEEccccccEEEcccEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEcccccccccccccccccccccEEEEEEEccccEEEEEEEEEccccccEEEEEEEcEEcccHHHHHHHHHHcHHHHHHHHHHccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEccccccccEEEEEEEEEEEHHcccccccccccHHHHHccccccccEEEEEcccEEEEEEccEEEEEEEccccccccEEEEEEEEccccccccEEEEEccccccccccEEEccccccccEEEEEEccccccEEEEEEEcccccccEEEEEEEEcccHHHHHHHHHHHcccHHHHHHHHHHcc
MEIMYLLCSILSTAFTSLALSLLLpfrtllrrrcpprasssyssdpvslyegtvwhdrrrpvrhsfkypvryalfdldhapqappdhlsagearrvaetngpvllltippsvgyeqnplslyycydvegsTQCLKKCIAevtntpwgervtfvfnpksdlvakplhvspfmdmhgnwsiranapgenLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRCPprasssyssdpvslyegtvwhdrrrpvRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
MEIMYLLCSIlstaftslalslllpfrtllrrrcpprasssyssdpvslYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
**IMYLLCSILSTAFTSLALSLLLPFRTLLRRRC************VSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDH*******************TNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYW*
MEIMYLLCSILSTAFTSLALSLLLPFRTLL****************VSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRC*************SLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRCP*********DPVSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRCPPRASSSYSSDPVSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYWH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
225443886318 PREDICTED: uncharacterized protein LOC10 1.0 0.748 0.746 1e-102
224114263305 predicted protein [Populus trichocarpa] 0.970 0.757 0.756 1e-95
356557807300 PREDICTED: uncharacterized protein LOC10 1.0 0.793 0.705 1e-95
18397373311 uncharacterized protein [Arabidopsis tha 0.983 0.752 0.707 2e-93
21618038311 unknown [Arabidopsis thaliana] 0.983 0.752 0.707 3e-93
356549106318 PREDICTED: uncharacterized protein LOC10 1.0 0.748 0.730 3e-92
297845942309 hypothetical protein ARALYDRAFT_473232 [ 0.983 0.757 0.711 6e-92
28416661311 At1g30130 [Arabidopsis thaliana] gi|1107 0.983 0.752 0.698 1e-91
357447263311 hypothetical protein MTR_2g019220 [Medic 1.0 0.765 0.697 2e-90
255557265314 conserved hypothetical protein [Ricinus 0.995 0.754 0.743 9e-89
>gi|225443886|ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera] gi|147866339|emb|CAN79921.1| hypothetical protein VITISV_002110 [Vitis vinifera] gi|297740736|emb|CBI30918.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/241 (74%), Positives = 201/241 (83%), Gaps = 3/241 (1%)

Query: 1   MEIMYLLCSILSTAFTSLALSLLLPFRTLLRRRCPPRA---SSSYSSDPVSLYEGTVWHD 57
           ME+ YLLCSILS  FTSL LS LLPFR LLR  C  R+   S++   DPVSLYEGTVWH+
Sbjct: 1   MELFYLLCSILSAFFTSLVLSCLLPFRALLRCLCSSRSVGSSAATGEDPVSLYEGTVWHE 60

Query: 58  RRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIPPSVGYEQN 117
           RRRPV HSF+Y VRYAL D+D AP   PDHLS  EARR+A T GPV LLTIPPSVGYEQN
Sbjct: 61  RRRPVHHSFRYAVRYALVDIDSAPNVLPDHLSGDEARRIAGTTGPVFLLTIPPSVGYEQN 120

Query: 118 PLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSPFMDMHGNW 177
           PLSLYYCYD+  STQ LK+CIAEVTNTPWGERVTFVFNP  DLVAKPLHVSPFMDM+GNW
Sbjct: 121 PLSLYYCYDLAASTQNLKQCIAEVTNTPWGERVTFVFNPNFDLVAKPLHVSPFMDMYGNW 180

Query: 178 SIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPHKVAFWIYW 237
           SI+AN PG+NLLV I+VQHP+LG+YF ATL AK+VSS L+ D+++FFWLMPHKVA WIYW
Sbjct: 181 SIKANVPGDNLLVAITVQHPKLGNYFTATLTAKKVSSSLVVDRELFFWLMPHKVAIWIYW 240

Query: 238 H 238
           H
Sbjct: 241 H 241




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114263|ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|222859776|gb|EEE97323.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356557807|ref|XP_003547202.1| PREDICTED: uncharacterized protein LOC100807625 [Glycine max] Back     alignment and taxonomy information
>gi|18397373|ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana] gi|42571697|ref|NP_973939.1| uncharacterized protein [Arabidopsis thaliana] gi|12321635|gb|AAG50861.1|AC074176_10 unknown protein [Arabidopsis thaliana] gi|222423586|dbj|BAH19762.1| AT1G30130 [Arabidopsis thaliana] gi|332193061|gb|AEE31182.1| uncharacterized protein [Arabidopsis thaliana] gi|332193062|gb|AEE31183.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21618038|gb|AAM67088.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356549106|ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791856 [Glycine max] Back     alignment and taxonomy information
>gi|297845942|ref|XP_002890852.1| hypothetical protein ARALYDRAFT_473232 [Arabidopsis lyrata subsp. lyrata] gi|297336694|gb|EFH67111.1| hypothetical protein ARALYDRAFT_473232 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|28416661|gb|AAO42861.1| At1g30130 [Arabidopsis thaliana] gi|110743324|dbj|BAE99550.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357447263|ref|XP_003593907.1| hypothetical protein MTR_2g019220 [Medicago truncatula] gi|355482955|gb|AES64158.1| hypothetical protein MTR_2g019220 [Medicago truncatula] Back     alignment and taxonomy information
>gi|255557265|ref|XP_002519663.1| conserved hypothetical protein [Ricinus communis] gi|223541080|gb|EEF42636.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
TAIR|locus:2202471311 AT1G30130 "AT1G30130" [Arabido 0.794 0.607 0.751 5.1e-81
UNIPROTKB|Q4K6A3271 PFL_5151 "Uncharacterized prot 0.558 0.490 0.344 2.8e-15
UNIPROTKB|Q888B3227 PSPTO_1117 "Uncharacterized pr 0.558 0.585 0.340 4.4e-13
UNIPROTKB|Q8EBW5263 SO_3380 "Uncharacterized prote 0.491 0.444 0.312 1.4e-11
TIGR_CMR|SO_3380263 SO_3380 "conserved hypothetica 0.491 0.444 0.312 1.4e-11
UNIPROTKB|Q0C193269 HNE_1796 "Putative uncharacter 0.529 0.468 0.335 2.3e-08
UNIPROTKB|Q9KSY5269 VC_1121 "Putative uncharacteri 0.630 0.557 0.276 3.9e-08
TIGR_CMR|VC_1121269 VC_1121 "conserved hypothetica 0.630 0.557 0.276 3.9e-08
UNIPROTKB|Q485Y8272 CPS_1384 "Putative uncharacter 0.554 0.485 0.302 2.1e-07
TIGR_CMR|CPS_1384272 CPS_1384 "conserved hypothetic 0.554 0.485 0.302 2.1e-07
TAIR|locus:2202471 AT1G30130 "AT1G30130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 790 (283.2 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
 Identities = 142/189 (75%), Positives = 158/189 (83%)

Query:    50 YEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAPPDHLSAGEARRVAETNGPVLLLTIP 109
             YEGTVWHDR RPVRHSF+Y VRYALFDLD A   PPDH SA EARRV+ T GP+ LLTIP
Sbjct:    47 YEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPPDHFSADEARRVSRTTGPIFLLTIP 106

Query:   110 PSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSDLVAKPLHVSP 169
             PSVGYEQNPLSLYYCYD+EGS++ L KCIA+VTNTPWGERVTFVF+P+SDLVAK L VSP
Sbjct:   107 PSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQVTNTPWGERVTFVFDPESDLVAKSLQVSP 166

Query:   170 FMDMHGNWSIRANAPGENLLVEISVQHPELGDYFVATLKAKRVSSQLMSDQDMFFWLMPH 229
             FMDM GNW IRAN PG++L V I+ QHP  G+YF ATLKAKR+    +SD  +FFWLMPH
Sbjct:   167 FMDMLGNWKIRANEPGDDLSVSIASQHPHFGNYFSATLKAKRIPLSRVSDPAVFFWLMPH 226

Query:   230 KVAFWIYWH 238
             KVA WIYWH
Sbjct:   227 KVAIWIYWH 235


GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|Q4K6A3 PFL_5151 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q888B3 PSPTO_1117 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EBW5 SO_3380 "Uncharacterized protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3380 SO_3380 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C193 HNE_1796 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KSY5 VC_1121 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1121 VC_1121 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q485Y8 CPS_1384 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1384 CPS_1384 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00028313001
SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (311 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020325001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (351 aa)
      0.700
GSVIVG00020324001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (316 aa)
      0.682
GSVIVG00032227001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (355 aa)
      0.611
GSVIVG00017810001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (292 aa)
      0.561
GSVIVG00020327001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (869 aa)
      0.550
GSVIVG00020323001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (114 aa)
       0.504
GSVIVG00000320001
SubName- Full=Chromosome chr9 scaffold_104, whole genome shotgun sequence; (382 aa)
       0.477

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
pfam07103244 pfam07103, DUF1365, Protein of unknown function (D 3e-60
COG3496261 COG3496, COG3496, Uncharacterized conserved protei 6e-31
>gnl|CDD|219297 pfam07103, DUF1365, Protein of unknown function (DUF1365) Back     alignment and domain information
 Score =  189 bits (482), Expect = 3e-60
 Identities = 83/229 (36%), Positives = 105/229 (45%), Gaps = 42/229 (18%)

Query: 47  VSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAP------------------PDHL 88
            +LY GTV H R RPVRH+F+Y V   L DLD  P+ P                   DHL
Sbjct: 1   SALYVGTVRHRRFRPVRHAFRYRVFMLLLDLDELPELPRLSRLFSRNRFNLASFRRRDHL 60

Query: 89  SAGEARRVAE------------TNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKK 136
                  +               +G V LLT P  +GY  NP+S YYCYD +G    L+ 
Sbjct: 61  GGPLDGALRAWVEALLAATGLDLDGRVRLLTQPRVLGYVFNPVSFYYCYDADGQ---LRA 117

Query: 137 CIAEVTNTPWGERVTFVF-----NPKSDLVAKPLHVSPFMDMHGNWSIRANAPGENLLVE 191
            +AEV+NT WGER +++       P    V K  HVSPFM M G +  R + PGE L V 
Sbjct: 118 VLAEVSNT-WGERHSYLLPVDGGEPDRLQVDKAFHVSPFMPMDGRYRFRFSPPGERLRVH 176

Query: 192 ISVQHPELGDYFVATLKAKRV--SSQLMSDQDMFFWLMPHKVAFWIYWH 238
           I   H   G  F ATL  +R   +   +    + + LM  KV   IYW 
Sbjct: 177 IDN-HRGGGPVFDATLAGRRRPLTRAALLRALLRYPLMTLKVIAGIYWQ 224


This family consists of several bacterial and plant proteins of around 250 residues in length. The function of this family is unknown. Length = 244

>gnl|CDD|226027 COG3496, COG3496, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 238
PF07103254 DUF1365: Protein of unknown function (DUF1365); In 100.0
COG3496261 Uncharacterized conserved protein [Function unknow 100.0
>PF07103 DUF1365: Protein of unknown function (DUF1365); InterPro: IPR010775 This family consists of several bacterial and plant proteins of around 250 residues in length Back     alignment and domain information
Probab=100.00  E-value=1.6e-70  Score=491.09  Aligned_cols=188  Identities=40%  Similarity=0.648  Sum_probs=168.0

Q ss_pred             eeEEEEEEEeecCCCCCCcccccceEEEEeCCCCCCCC------------------CCCCCh-----hh-----------
Q 040524           47 VSLYEGTVWHDRRRPVRHSFKYPVRYALFDLDHAPQAP------------------PDHLSA-----GE-----------   92 (238)
Q Consensus        47 ~~ly~g~V~H~R~~P~~H~F~Y~~~~~~lDLDel~~~~------------------~Dhl~~-----~~-----------   92 (238)
                      |+||.|+|+|+|+.|++|+|+|+++|+++||||+++++                  +|||+.     ++           
T Consensus         1 S~ly~g~v~H~R~~P~~h~F~Y~~~~~~lDLd~l~~~~~~~~~fs~~r~~l~sf~~~Dyl~~~~~~~~~~l~~~v~~~l~   80 (254)
T PF07103_consen    1 SALYVGRVRHRRFRPKRHRFSYPVFMLLLDLDELEQLFRKSRLFSRNRFNLFSFRDRDYLGDPSGSLDGSLREWVEALLA   80 (254)
T ss_pred             CeEEEEEEEEccCCCCCceEecceEEEEEEcchhhhccccccccccCCccEeEEeHHHcCCCCCCChhHHHHHHHHHhhh
Confidence            68999999999999999999999999999999999653                  489742     11           


Q ss_pred             hcccccCCCcEEEEecCCccceeeCccEEEEEEeCCCCccceeEEEEEeeCCCCCceEEEEecCCCC---------ccCc
Q 040524           93 ARRVAETNGPVLLLTIPPSVGYEQNPLSLYYCYDVEGSTQCLKKCIAEVTNTPWGERVTFVFNPKSD---------LVAK  163 (238)
Q Consensus        93 ~~~i~~~~g~I~LLT~pR~lGy~FNPVSfYyc~d~~~~~~~L~avlaEV~NTPfgERH~Yvl~~~~~---------~~~K  163 (238)
                      +.|++.. |+|+|||+||+|||+|||||||||||++|   +|++||||||||||||||+|++++++.         .++|
T Consensus        81 ~~g~~~~-g~I~Llt~pR~lGy~FNPvSfyyc~d~~~---~l~~vvaEV~NTPfgErH~Yvl~~~~~~~~~~~~~~~~~K  156 (254)
T PF07103_consen   81 EHGIDPD-GRIYLLTMPRYLGYVFNPVSFYYCYDADG---QLRAVVAEVNNTPFGERHCYVLPADQGRPIDESFRFTFPK  156 (254)
T ss_pred             hcCCCCC-CEEEEEechhhCCeEeCCeEEEEEEcCCC---CEEEEEEEEeCCCCCcEEEEEecccccCccCcCceeEecc
Confidence            1344445 99999999999999999999999999998   599999999999999999999998521         5899


Q ss_pred             ceeeCCCCCCCceEEEEEeCCCCeeEEEEEEecCC--CCcEEEEEeeeecccCChhh--hHHHHhhhhHHhhheeeeeC
Q 040524          164 PLHVSPFMDMHGNWSIRANAPGENLLVEISVQHPE--LGDYFVATLKAKRVSSQLMS--DQDMFFWLMPHKVAFWIYWH  238 (238)
Q Consensus       164 ~FHVSPF~~m~g~Y~f~~~~p~~~l~i~I~~~~~~--~~~~f~Atl~g~r~plt~~~--~l~~~~p~~tlkvi~~IyWQ  238 (238)
                      +|||||||||+|+|+|+++.|++++.|+|++.+++  +++.|+|+|+|+++|+|+++  +...++|+||+||+++||||
T Consensus       157 ~FHVSPF~~~~g~Y~~~~~~p~~~l~v~I~~~~~~~~~~~~~~Atl~~~~~plt~~~l~~~~~~~P~~t~~v~~~I~wq  235 (254)
T PF07103_consen  157 AFHVSPFNPMDGRYRFRFRDPGDRLSVRIDLYDDRDGGQKVFDATLRGKRRPLTTASLLRALLRYPLMTFKVVARIHWQ  235 (254)
T ss_pred             eeeECCCCCCCCEEEEEEcCCCcceEEEEEeecCccCCCceEEEEeEeecccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998443  47899999999999999999  34556999999999999998



The function of this family is unknown.

>COG3496 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00