Citrus Sinensis ID: 040644

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
Protein Sequence
MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLVAN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccEEEcccEEEccccccccccccccccHHHHHHHHccccEEEcccccccEEEEEEcccccccccccccccccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccccccEEEcccccccEEEEEccccccccccccHccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccEEEEEEEHEHcccccEEEEEEccccccHHHHHHHccccEEEccccccccEEEEEcccccccccccHccccHHHHcHHHHcccccHHccc
Coil and Loop (DISEMBL)
meakllpqtyrtpfistvlvprrhrvriikpeTSCVVAVLarpaetrnakpkqLERKAEVVQKTvyndgwfdQIAINHLSQSVQDAtgiknnkggyEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGpcevresevngkteknVVHIKKCRfleesncvgmctnlckmpsqtfikdslgmpvnmvpnfddmscemifgqeplassddpafkqpcyklckESRRHTLNDLVAN
Flexible Loop (DISEMBL)
meakllpqtyrtpfistvlvprrhrvriikpetscvvavlarpaetrnakpkqlerkAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVResevngkteknvvhIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCkesrrhtlndlvan
Low Complexity Region (SEG)
MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLVAN
Disordered region (IsUnstruct)
*******QTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLAR****************EVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFG**************PCYKLC**************
Disordered Region (DISOPRED)
********TYR*****************************************************VYNDGWFDQIAINHLSQSVQD****KNNKGGYEGMVEAAKA*************VIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRR*T*******
Disordered Region (DISEMBL)
MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLVAN
Disordered Region (DISPRO)
*EAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARP*******************KTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLV**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLVAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
361064616	252	dwarf 27 [Medicago truncatula]	0.831	0.880	0.668	3e-90
356503568	253	PREDICTED: uncharacterized protein LOC10	0.827	0.873	0.639	5e-85
296084501	279	unnamed protein product [Vitis vinifera]	0.917	0.878	0.586	3e-84
356500156	249	PREDICTED: uncharacterized protein LOC10	0.842	0.903	0.630	4e-84
359495440	247	PREDICTED: uncharacterized protein LOC10	0.898	0.971	0.597	9e-84
449455260	253	PREDICTED: uncharacterized protein LOC10	0.827	0.873	0.631	6e-82
356536794	274	PREDICTED: uncharacterized protein LOC10	0.876	0.854	0.588	7e-80
254946546	278	DWARF27 [Oryza sativa Japonica Group]	0.883	0.848	0.536	3e-72
326492644	275	predicted protein [Hordeum vulgare subsp	0.853	0.829	0.567	1e-71
77551663	236	hypothetical protein LOC_Os11g37650 [Ory	0.827	0.936	0.548	2e-70

>gi|361064616|gb|AEW07379.1| dwarf 27 [Medicago truncatula]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 155/232 (66%), Positives = 187/232 (80%), Gaps = 10/232 (4%)

Query: 29  IKPETSCVVAVLARPAETRNAKPKQLERKAEVVQKT-VYNDGWFDQIAINHLSQSVQDAT 87
           +KP+ + VV VLARP +         +   E ++KT VY D WFD++AINHLS+SVQ AT
Sbjct: 24  LKPKHTFVVGVLARPTD---------DISEETLRKTNVYKDNWFDKLAINHLSKSVQAAT 74

Query: 88  GIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLARE 147
           GI NNK G++ +VEAA    + F+  QQ+ I++ AL+RAFP+PIL+++R V+P SKLARE
Sbjct: 75  GISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPILSVIRRVMPPSKLARE 134

Query: 148 FFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQT 207
           +FAVFTTIFFAWL+GP EVRESE+NG+ EKN+VHIKKCRFLEE+NCVGMC NLCKMPSQ 
Sbjct: 135 YFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQL 194

Query: 208 FIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRH 259
           FIKDS GMPVNMVPNFDDMSCEMIFGQEP AS+DDPA KQPCYKLCK  + H
Sbjct: 195 FIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCKAKKNH 246

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503568|ref|XP_003520579.1| PREDICTED: uncharacterized protein LOC100813404 [Glycine max]

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/230 (63%), Positives = 180/230 (78%), Gaps = 9/230 (3%)

Query: 30  KPETSCVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGI 89
           KPE  CVVA+L  P++             E  +   Y D  FD++AI+HLS+SVQ+ATG+
Sbjct: 26  KPEHPCVVAMLRTPSDNITG---------ETRKTNAYKDNLFDRLAIHHLSKSVQEATGL 76

Query: 90  KNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFF 149
            NNK GYE +VEAA      FD  QQ+ ++IQAL RAFP+PIL++++ +LP SKL+RE+F
Sbjct: 77  GNNKSGYESLVEAATVAKMKFDPIQQQEVIIQALHRAFPKPILSLIKTLLPPSKLSREYF 136

Query: 150 AVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFI 209
           AVFTT+FFAWLVGP EVRESEVNG+ EKN+++   CRFLEE+NCVGMC NLCKMPSQ+FI
Sbjct: 137 AVFTTLFFAWLVGPSEVRESEVNGRREKNLLNNNLCRFLEETNCVGMCINLCKMPSQSFI 196

Query: 210 KDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRH 259
           KD+LGMPVNMVPNFDDMSCEMIFGQEP AS+DDPA KQPCYKLCK  ++H
Sbjct: 197 KDTLGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCKAYKKH 246

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084501|emb|CBI25060.3| unnamed protein product [Vitis vinifera]

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/266 (58%), Positives = 194/266 (72%), Gaps = 21/266 (7%)

Query: 5   LLPQTYRTPFISTVLVPRRHRV-----RIIKPETSC-VVAVLARPAETRNAKPKQLERKA 58
           LL   Y+ P  + ++   R  V      + KP +S  ++AVLARPA+             
Sbjct: 24  LLFSLYQIPMDAKLVTQHRSHVWAGKRGMHKPRSSPPILAVLARPADN-----------L 72

Query: 59  EVVQKT--VYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQR 116
            +V++T  +  D WFD+IAINHLSQSVQ  TG++N+K GYE +VEAA  V RNFD  QQ 
Sbjct: 73  TLVKETPSLLTDNWFDRIAINHLSQSVQATTGLRNSKSGYESLVEAAAMVSRNFDPIQQC 132

Query: 117 AIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTE 176
            +VI+AL +AFP PIL+++R ++P+SK  RE+FA FTT+FFAWLVGPC+V ESE+NG+ E
Sbjct: 133 ELVIEALNKAFPSPILSLIRTLMPQSKFTREYFAAFTTLFFAWLVGPCKVIESEINGRRE 192

Query: 177 KNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEP 236
           KNVVHIKKCRFLEESNCVGMC NLCK PSQ FIKDSLGMPVNMVPNFDDMSC+MIFGQ+P
Sbjct: 193 KNVVHIKKCRFLEESNCVGMCLNLCKNPSQKFIKDSLGMPVNMVPNFDDMSCQMIFGQDP 252

Query: 237 LASSDDPAFKQPCYKLCKESRRHTLN 262
               DDP  +QPCYKLCK  + H++N
Sbjct: 253 --PGDDPVLRQPCYKLCKAKKNHSVN 276

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500156|ref|XP_003518899.1| PREDICTED: uncharacterized protein LOC100782912 [Glycine max]

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 147/233 (63%), Positives = 181/233 (77%), Gaps = 8/233 (3%)

Query: 35  CVVAVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKG 94
           CVV VLARPA+  + + ++           VY DG FD+IAIN+LS+ VQ+ATG+KN+K 
Sbjct: 25  CVVGVLARPADDISGEARKTNH--------VYKDGLFDRIAINYLSKCVQEATGLKNSKS 76

Query: 95  GYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTT 154
           GYE +VEAA    + F   +Q  +VIQ+L+RAFP+P+L ++R +LP SK AR+ FA+FTT
Sbjct: 77  GYESLVEAATLASQRFSPIEQHQLVIQSLDRAFPKPMLLLIRTLLPPSKFARKLFAIFTT 136

Query: 155 IFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLG 214
           +FFAWLVGP EVRESEV G+ E+NVVHIKKCRFLEE+NCVGMC NLCK+PSQ+FIKDSLG
Sbjct: 137 LFFAWLVGPSEVRESEVEGRRERNVVHIKKCRFLEETNCVGMCINLCKLPSQSFIKDSLG 196

Query: 215 MPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLVAN 267
           M VNMVPNFDDMSCEMIFG++P  S+DDPA  QPC+KLCK  R H  N LV N
Sbjct: 197 MSVNMVPNFDDMSCEMIFGEDPPESTDDPALNQPCFKLCKAKRSHGTNCLVIN 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495440|ref|XP_003634993.1| PREDICTED: uncharacterized protein LOC100853223 [Vitis vinifera]

 Score =  315 bits (808), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 159/266 (59%), Positives = 196/266 (73%), Gaps = 26/266 (9%)

Query: 1   MEAKLLPQTYRTPFISTVLVPRR--HRVRIIKPETSCVVAVLARPAETRNAKPKQLERKA 58
           M+AKL+ Q +R    S V   +R  H+ R   P    ++AVLARPA+             
Sbjct: 1   MDAKLVTQ-HR----SHVWAGKRGMHKPRSSPP----ILAVLARPADN-----------L 40

Query: 59  EVVQKT--VYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQR 116
            +V++T  +  D WFD+IAINHLSQSVQ  TG++N+K GYE +VEAA  V RNFD  QQ 
Sbjct: 41  TLVKETPSLLTDNWFDRIAINHLSQSVQATTGLRNSKSGYESLVEAAAMVSRNFDPIQQC 100

Query: 117 AIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTE 176
            +VI+AL +AFP PIL+++R ++P+SK  RE+FA FTT+FFAWLVGPC+V ESE+NG+ E
Sbjct: 101 ELVIEALNKAFPSPILSLIRTLMPQSKFTREYFAAFTTLFFAWLVGPCKVIESEINGRRE 160

Query: 177 KNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEP 236
           KNVVHIKKCRFLEESNCVGMC NLCK PSQ FIKDSLGMPVNMVPNFDDMSC+MIFGQ+P
Sbjct: 161 KNVVHIKKCRFLEESNCVGMCLNLCKNPSQKFIKDSLGMPVNMVPNFDDMSCQMIFGQDP 220

Query: 237 LASSDDPAFKQPCYKLCKESRRHTLN 262
               DDP  +QPCYKLCK  + H++N
Sbjct: 221 --PGDDPVLRQPCYKLCKAKKNHSVN 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455260|ref|XP_004145371.1| PREDICTED: uncharacterized protein LOC101219340 [Cucumis sativus] gi|449472846|ref|XP_004153712.1| PREDICTED: uncharacterized protein LOC101218896 [Cucumis sativus] gi|449509343|ref|XP_004163561.1| PREDICTED: uncharacterized protein LOC101223880 [Cucumis sativus]

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 144/228 (63%), Positives = 172/228 (75%), Gaps = 7/228 (3%)

Query: 38  AVLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYE 97
            VL RPAE    +  +  RK      TVY D WFD+IAI+HLSQ+VQ  +G ++ K GYE
Sbjct: 33  GVLTRPAE---GELIEETRKTN----TVYTDNWFDKIAIDHLSQAVQATSGWRSKKSGYE 85

Query: 98  GMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFF 157
            +VE      RNF+  +Q+ +VIQAL  AFP+PIL++++A+LP+SKLARE+FA FTT+FF
Sbjct: 86  SLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLIKALLPQSKLAREYFAAFTTVFF 145

Query: 158 AWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPV 217
           AWLVGPCEV+ESE  GK EKNVV I KCRFLE++NC GMC NLCK P Q FIKDSLGMPV
Sbjct: 146 AWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPV 205

Query: 218 NMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTLNDLV 265
            MVPNFDDMSCEMIFG+EP AS DDPA KQPCYKLCK   +HT N  +
Sbjct: 206 TMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKLCKTKEKHTTNCFI 253

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536794|ref|XP_003536919.1| PREDICTED: uncharacterized protein LOC100814646 [Glycine max]

 Score =  303 bits (775), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 149/253 (58%), Positives = 188/253 (74%), Gaps = 19/253 (7%)

Query: 1   MEAKLLPQTYRTPFISTVLVPRRHRVRIIKPETSCVV-AVLARPAETRNAKPKQLERKAE 59
           MEAKL+ Q  ++P +S       HR    KP+  CVV  VLARP +  + + ++      
Sbjct: 1   MEAKLVAQC-KSPTLSLA-----HR----KPKHPCVVVGVLARPVDEISGEARKTNH--- 47

Query: 60  VVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIV 119
                VY DG FD+I IN+LS+ VQ+ATG++NNK GYE +V+AA    + F   +Q  +V
Sbjct: 48  -----VYKDGLFDRITINYLSKCVQEATGLRNNKSGYESLVDAATVASQRFSPVEQHQLV 102

Query: 120 IQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNV 179
           IQ+L+RAFP+P+L ++R +LP SK AR+ FAVFTT+FFAWLVGP EVRESEV G+ E+NV
Sbjct: 103 IQSLDRAFPKPMLLLIRKLLPPSKFARKLFAVFTTLFFAWLVGPSEVRESEVEGRRERNV 162

Query: 180 VHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLAS 239
           VHIKKCRFLE +NCVGMC NLCK+PSQ+FIKDSLG+ VNMVPNFDDMSCEMIFGQ+P  S
Sbjct: 163 VHIKKCRFLEGTNCVGMCINLCKLPSQSFIKDSLGISVNMVPNFDDMSCEMIFGQDPPES 222

Query: 240 SDDPAFKQPCYKL 252
           +DDPA KQPC+KL
Sbjct: 223 TDDPALKQPCFKL 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|254946546|gb|ACT91266.1| DWARF27 [Oryza sativa Japonica Group]

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 134/250 (53%), Positives = 174/250 (69%), Gaps = 14/250 (5%)

Query: 25  RVRIIKPETSCVVAVLARPAETRNAKPKQLERKAEVVQK-----------TVYNDGWFDQ 73
           R  +++   S V AV+ARP E   + P +    A ++             TVY D WFD+
Sbjct: 28  RSYVMRRCCSTVRAVMARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDK 87

Query: 74  IAINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILT 133
           +AI +LS+++Q+A+G+KN K GYE +++AA A+ R F   +Q  IV QALERA P  ILT
Sbjct: 88  LAIGYLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILT 147

Query: 134 MVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNC 193
           M++ ++P S+ +RE+FA FTTIFF WLVGPCEV ESEV G+ EKNVV+I KCRFLE +NC
Sbjct: 148 MIKVMMPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNC 207

Query: 194 VGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKL- 252
           VGMCTNLCK+P Q FI+DSLGM V M PNF+DMSCEMIFGQ+P    DDPA KQPC++  
Sbjct: 208 VGMCTNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQP--PEDDPALKQPCFRTK 265

Query: 253 CKESRRHTLN 262
           C   + H +N
Sbjct: 266 CVAKQNHGVN 275

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326492644|dbj|BAJ90178.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/236 (56%), Positives = 170/236 (72%), Gaps = 8/236 (3%)

Query: 20  VPRRHRVRIIKPETSCVVAVLARPAETRNAK-----PKQLERKAEVVQKTVYNDGWFDQI 74
           V ++   R IK  +S V  V+ARP E   A+     P +  R+      TVY+D WFD +
Sbjct: 29  VTKKSYARRIK-RSSTVRGVMARPQEATLARVPAPAPTRPVRETAAATTTVYHDTWFDNL 87

Query: 75  AINHLSQSVQDATGIKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTM 134
           AI +LS+ +Q+A+GIKN K GY+G++EAA A+ R F    Q  IV  ALERA P  I+TM
Sbjct: 88  AIGYLSRKLQEASGIKNGKHGYQGLIEAAVAISRIFRLDTQCEIVAGALERAMPSYIVTM 147

Query: 135 VRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCV 194
           ++ ++P S+ +RE+FA FTTIFF WLVGPCEVRESEV+G  EKNVV+I KCRFLE +NCV
Sbjct: 148 IKVMMPPSRFSREYFAAFTTIFFPWLVGPCEVRESEVDGTREKNVVYIPKCRFLESTNCV 207

Query: 195 GMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCY 250
           GMCTNLCK+PSQ F++DSLG+ V M PNF+DMSCEMIFGQ+P    DDPA KQPC+
Sbjct: 208 GMCTNLCKIPSQKFMQDSLGVSVYMSPNFEDMSCEMIFGQQP--PEDDPALKQPCF 261

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77551663|gb|ABA94460.1| hypothetical protein LOC_Os11g37650 [Oryza sativa Japonica Group] gi|125577746|gb|EAZ18968.1| hypothetical protein OsJ_34503 [Oryza sativa Japonica Group]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/235 (54%), Positives = 166/235 (70%), Gaps = 14/235 (5%)

Query: 40  LARPAETRNAKPKQLERKAEVVQK-----------TVYNDGWFDQIAINHLSQSVQDATG 88
           +ARP E   + P +    A ++             TVY D WFD++AI +LS+++Q+A+G
Sbjct: 1   MARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIGYLSRNLQEASG 60

Query: 89  IKNNKGGYEGMVEAAKAVLRNFDQAQQRAIVIQALERAFPRPILTMVRAVLPESKLAREF 148
           +KN K GYE +++AA A+ R F   +Q  IV QALERA P  ILTM++ ++P S+ +RE+
Sbjct: 61  LKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKVMMPPSRFSREY 120

Query: 149 FAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTF 208
           FA FTTIFF WLVGPCEV ESEV G+ EKNVV+I KCRFLE +NCVGMCTNLCK+P Q F
Sbjct: 121 FAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMCTNLCKIPCQKF 180

Query: 209 IKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKL-CKESRRHTLN 262
           I+DSLGM V M PNF+DMSCEMIFGQ+P    DDPA KQPC++  C   + H +N
Sbjct: 181 IQDSLGMKVYMSPNFEDMSCEMIFGQQP--PEDDPALKQPCFRTKCVAKQNHGVN 233

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
TAIR|locus:505006097	264	D27 "AT1G03055" [Arabidopsis t	0.719	0.727	0.556	7.3e-59
TAIR|locus:2010856	250	AT1G64680 "AT1G64680" [Arabido	0.722	0.772	0.421	4.9e-37
TAIR|locus:504955232	258	AT4G01995 "AT4G01995" [Arabido	0.823	0.852	0.320	2.1e-29

TAIR|locus:505006097 D27 "AT1G03055" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 108/194 (55%), Positives = 151/194 (77%)

Query:    68 DGWFDQIAINHLSQSVQDATGIKNNKGG--YEGMVEAAKAVLRNFDQAQQRAIVIQALER 125
             D +F +IAIN+LS+++QDA GI ++     Y+ +V+ A  V RNFD  QQ   V+ +L+R
Sbjct:    67 DSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDR 126

Query:   126 AFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNGKTEKNVVHIKKC 185
             A P  I ++++   P SK++RE FA+FTTI FAWLVGP EVRE+EVNG+ EK+VV+I+KC
Sbjct:   127 ALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKC 186

Query:   186 RFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEPLASSDDPAF 245
             RFLE+SNCVGMCT++CK+PSQ FIK+SLGMP+ M P+F+D+SC+M+FG+EP    DDPA 
Sbjct:   187 RFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEIEDDPAM 246

Query:   246 KQPCYKLCKESRRH 259
             KQPC++ CK ++ +
Sbjct:   247 KQPCFEFCKSNKSY 260

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009536 "plastid" evidence=IDA

GO:0010223 "secondary shoot formation" evidence=IMP

GO:1901601 "strigolactone biosynthetic process" evidence=IGI

TAIR|locus:2010856 AT1G64680 "AT1G64680" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 86/204 (42%), Positives = 117/204 (57%)

Query:    63 KTVYNDGWFDQIAINHLSQSVQDATGIKNNKG----G-----YEGMVEAAKAVLRNFDQA 113
             KT Y DG  +++ +   ++ + D  G K  K     G     YE  VE +K V++   + 
Sbjct:    36 KTRYEDGLVERVFMGLFARKM-DKFGSKKKKDTKEKGFWEYDYESFVEVSKRVMQGRSRV 94

Query:   114 QQRAIVIQALERAFPRPILTMVRAVLPESKLAREFFAVFTTIFFAWLVGPCEVRESEVNG 173
             QQ+  V + L    P       R + P +K A EF A  T  FF WLVGP +V E EVNG
Sbjct:    95 QQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVIEVEVNG 154

Query:   174 KTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFG 233
               +++ V IKKCR+LE S CVGMC N+CK+P+Q F  +  G+P+ M PN++DMSCEMI+G
Sbjct:   155 VKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSCEMIYG 214

Query:   234 QEPLASSDDPAFKQPCYK-LCKES 256
             Q P A  +D A KQPC   +C  S
Sbjct:   215 QAPPAFEEDVATKQPCLADICSMS 238

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:504955232 AT4G01995 "AT4G01995" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 73/228 (32%), Positives = 119/228 (52%)

Query:    39 VLARPAETRNAKPKQLERKAEVVQKTVYNDGWFDQIAINHLSQSVQDATGIKNNKGGYEG 98
             +L R    R +   ++ +  E   K  Y  G  D   +      + +  G  + K GY G
Sbjct:    26 ILTRRLRCRISNSSEV-KSDEGAPKLEYKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVG 84

Query:    99 MVEAAKAVL-RNFDQAQQRAIVIQALERAFPRPILTMVR---AVLPESKLAREFFAVFTT 154
             ++E  K +L +   +++     ++ L+  FP  IL + +   A + + KLA    A  T 
Sbjct:    85 LIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTV 144

Query:   155 IFFAWLVGPCEVRESEV-NGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSL 213
             +   WL+GP +V   ++ NG++  + V ++KC++LEES CVG+C N CK+P+QTF KD +
Sbjct:   145 LTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYM 204

Query:   214 GMPVNMVPNFDDMSCEMIFGQEPLASSDDPAFKQPCYKLCKESRRHTL 261
             G+P+ M PNF D SC+  FG  P    DD    +PC++ C  + R  L
Sbjct:   205 GVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPCFETCSIAGRRKL 250


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      267       267   0.00095  114 3  11 22  0.43    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  196 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.81u 0.10s 21.91t   Elapsed:  00:00:01
  Total cpu time:  21.81u 0.10s 21.91t   Elapsed:  00:00:01
  Start:  Sat May 11 05:11:44 2013   End:  Sat May 11 05:11:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	267
pfam13225	85	pfam13225, DUF4033, Domain of unknown function (DU	3e-50

>gnl|CDD|221990 pfam13225, DUF4033, Domain of unknown function (DUF4033)

 Score =  159 bits (404), Expect = 3e-50
 Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 1/85 (1%)

Query: 159 WLVGPCEVRESEVN-GKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPV 217
           WLVGPCEV E E   G+ EK+ V IKKCR+LEES C GMC N CK+P+QTF K+  G+P+
Sbjct: 1   WLVGPCEVNEVENGLGRGEKSGVLIKKCRYLEESGCAGMCVNTCKLPTQTFFKEEFGLPL 60

Query: 218 NMVPNFDDMSCEMIFGQEPLASSDD 242
            M PNF+D SC+MIFGQ P    +D
Sbjct: 61  TMEPNFEDYSCQMIFGQTPPPIEED 85

This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is approximately 80 amino acids in length. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	267
PF13225	86	DUF4033: Domain of unknown function (DUF4033)	100.0

>PF13225 DUF4033: Domain of unknown function (DUF4033)

Probab=100.00  E-value=2.5e-55  Score=344.09  Aligned_cols=84  Identities=61%  Similarity=1.242  Sum_probs=82.9

Q ss_pred             cceeceeeeEee--ecCeeeeceEEeecceeeecccccccccccccCCchhhhhhhcCCcccccCCccccceeEeecCCC
Q 040644          159 WLVGPCEVRESE--VNGKTEKNVVHIKKCRFLEESNCVGMCTNLCKMPSQTFIKDSLGMPVNMVPNFDDMSCEMIFGQEP  236 (267)
Q Consensus       159 WLVGP~ev~eve--vdG~~~~sgV~IeKCRyLEeSgC~GmCvN~CKiPTQ~FF~d~~GlpLtM~PNFeD~SCqm~FG~~P  236 (267)
                      ||||||+|+++|  .+|.+++||||||||||||||||+|||+|+||+|||+||+|+|||||||+||||||||||+||++|
T Consensus         1 WLvGp~~v~~~e~~~~~~~~~sgV~i~kCRyLEes~C~g~C~N~CK~PtQ~Ff~~~~Glpl~M~PNfed~SC~~~FG~~P   80 (86)
T PF13225_consen    1 WLVGPCEVNEVEENGNGRGQKSGVHIEKCRYLEESGCAGMCVNMCKIPTQTFFKEEFGLPLTMEPNFEDFSCQMIFGQTP   80 (86)
T ss_pred             CcccccEeeEeeccCCCccccceEEEEEeEEeecCCceeeeehhcccchHHHHHhccCCceEecCCCcCcEEEEEcCCCC
Confidence            999999999999  788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 040644          237 LASSDD  242 (267)
Q Consensus       237 Pp~eeD  242 (267)
                      ||+|||
T Consensus        81 pp~eeD   86 (86)
T PF13225_consen   81 PPIEED   86 (86)
T ss_pred             CCCCCC
Confidence            999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00