Conserved Domains and Related Protein Families
Homologous Structure Templates
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | | 61 |
|
|
| 4do4_A | |
400 |
Alpha-N-acetylgalactosaminidase; pharmacological c |
98.84 |
| 3hg3_A | |
404 |
Alpha-galactosidase A; glycoprotein, carbohydrate- |
98.08 |
| 1uas_A | |
362 |
Alpha-galactosidase; TIM-barrel, beta-alpha-barrel |
97.83 |
| 3lrk_A | |
479 |
Alpha-galactosidase 1; tetramer, GH27, glycoprotei |
97.57 |
| 1szn_A | |
417 |
Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma |
97.56 |
| 3a5v_A | |
397 |
Alpha-galactosidase; beta/alpha barrel, N-glycosyl |
97.43 |
| 3cc1_A | |
433 |
BH1870 protein, putative alpha-N-acetylgalactosami |
97.29 |
| 3a21_A | |
614 |
Putative secreted alpha-galactosidase; beta-alpha- |
95.41 |
| >4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* |
Back alignment and structure |
|---|
Probab=98.84 E-value=3.2e-10 Score=78.61 Aligned_cols=16 Identities=50% Similarity=0.638 Sum_probs=14.9
Q ss_pred ccCCCCCCCCCCCCCC
Q 040697 38 LTNGLASTPQMGGILD 53 (61)
Q Consensus 38 L~NGLG~TPQMGWNS~ 53 (61)
|+||||+||||||||=
T Consensus 1 l~ngla~tPpmGWnSW 16 (400)
T 4do4_A 1 LDNGLLQTPPMGWLAW 16 (400)
T ss_dssp CCSSCCSSCCEEEESH
T ss_pred CCCCcCCCCCCcccch
Confidence 7999999999999993
|
|
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* |
Back alignment and structure |
|---|
Probab=98.08 E-value=4.5e-07 Score=67.52 Aligned_cols=17 Identities=53% Similarity=0.601 Sum_probs=15.2
Q ss_pred ccCCCCCCCCCCCCCCC
Q 040697 38 LTNGLASTPQMGGILDY 54 (61)
Q Consensus 38 L~NGLG~TPQMGWNS~~ 54 (61)
|+||||+||||||||=+
T Consensus 1 l~ngla~tppmGWnsW~ 17 (404)
T 3hg3_A 1 LDNGLARTPTMGWLHWE 17 (404)
T ss_dssp CCSSCCSSCCEEEESHH
T ss_pred CCCCCCCCCceEEEcHh
Confidence 68999999999999853
|
|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 |
Back alignment and structure |
|---|
Probab=97.83 E-value=2.5e-06 Score=60.04 Aligned_cols=17 Identities=47% Similarity=0.487 Sum_probs=15.1
Q ss_pred ccCCCCCCCCCCCCCCC
Q 040697 38 LTNGLASTPQMGGILDY 54 (61)
Q Consensus 38 L~NGLG~TPQMGWNS~~ 54 (61)
|+|||++||||||||=+
T Consensus 1 ~~~~~~~~pp~gwnsW~ 17 (362)
T 1uas_A 1 FENGLGRTPQMGWNSWN 17 (362)
T ss_dssp CCSSCCSSCCEEEESHH
T ss_pred CCCCCCCCCCEEEECHH
Confidence 58999999999999853
|
|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* |
Back alignment and structure |
|---|
Probab=97.57 E-value=1e-05 Score=61.97 Aligned_cols=21 Identities=43% Similarity=0.310 Sum_probs=17.4
Q ss_pred cceeccCCCCCCCCCCCCCCC
Q 040697 34 GTLQLTNGLASTPQMGGILDY 54 (61)
Q Consensus 34 rR~LL~NGLG~TPQMGWNS~~ 54 (61)
....++|||++||||||||=+
T Consensus 18 ~~~a~~ngla~tPpmGWNSW~ 38 (479)
T 3lrk_A 18 GVSPSYNGLGLTPQMGWDNWN 38 (479)
T ss_dssp -CCCCSSSCCSSCCEEEESHH
T ss_pred hhhhhhCCCCCCCceEEEchH
Confidence 456789999999999999843
|
|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* |
Back alignment and structure |
|---|
Probab=97.56 E-value=1.1e-05 Score=58.84 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=15.6
Q ss_pred eccCC-CCCCCCCCCCCC
Q 040697 37 QLTNG-LASTPQMGGILD 53 (61)
Q Consensus 37 LL~NG-LG~TPQMGWNS~ 53 (61)
+|+|| |++||||||||=
T Consensus 2 ~~~ng~~~~~ppmgwnsW 19 (417)
T 1szn_A 2 VMPDGVTGKVPSLGWNSW 19 (417)
T ss_dssp CCTTSSTTTSCCEEEESH
T ss_pred cccCCccCCCCCEEEEch
Confidence 68999 999999999984
|
|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} |
Back alignment and structure |
|---|
Probab=97.43 E-value=2e-05 Score=56.84 Aligned_cols=16 Identities=56% Similarity=0.511 Sum_probs=14.3
Q ss_pred cCCCCCCCCCCCCCCC
Q 040697 39 TNGLASTPQMGGILDY 54 (61)
Q Consensus 39 ~NGLG~TPQMGWNS~~ 54 (61)
+||||+||||||||=+
T Consensus 2 ~~gla~~pp~gwnsW~ 17 (397)
T 3a5v_A 2 NNGLAITPQMGWNTWN 17 (397)
T ss_dssp CSSCCSSCCEEEESHH
T ss_pred CCCcCCCCCEEEECHH
Confidence 6999999999999853
|
|
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} |
Back alignment and structure |
|---|
Probab=97.29 E-value=3.3e-05 Score=56.16 Aligned_cols=18 Identities=28% Similarity=0.143 Sum_probs=15.7
Q ss_pred eeccCCCCCCCCCCCCCC
Q 040697 36 LQLTNGLASTPQMGGILD 53 (61)
Q Consensus 36 ~LL~NGLG~TPQMGWNS~ 53 (61)
+-++|||+.||||||||=
T Consensus 2 ~~~~~~~~~~pp~gwnsW 19 (433)
T 3cc1_A 2 MEVNRLSALTPPMGWNSW 19 (433)
T ss_dssp CCCSCBTTBCCCEEEESH
T ss_pred ccccCCCCCCCCEEEECh
Confidence 357899999999999984
|
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* |
Back alignment and structure |
|---|
Probab=95.41 E-value=0.0024 Score=47.89 Aligned_cols=16 Identities=13% Similarity=-0.118 Sum_probs=13.3
Q ss_pred cCCCCCCCCCCCCCCC
Q 040697 39 TNGLASTPQMGGILDY 54 (61)
Q Consensus 39 ~NGLG~TPQMGWNS~~ 54 (61)
.+.++.||||||||-+
T Consensus 5 ~~~~~~~~p~gwnsw~ 20 (614)
T 3a21_A 5 RQITVPSAPMGWASWN 20 (614)
T ss_dssp EECCCCCCCEEEESHH
T ss_pred ccccCCCCceEEEchh
Confidence 3589999999999843
|
|
Homologous Structure Domains